BLASTX nr result
ID: Catharanthus23_contig00024914
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00024914
(429 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004307034.1| PREDICTED: 54S ribosomal protein L51, mitoch... 54 6e-12
ref|XP_004307035.1| PREDICTED: 54S ribosomal protein L51, mitoch... 54 7e-12
ref|XP_002465669.1| hypothetical protein SORBIDRAFT_01g043440 [S... 52 5e-11
ref|XP_002438166.1| hypothetical protein SORBIDRAFT_10g009060 [S... 52 5e-11
ref|NP_001148774.1| LOC100282391 [Zea mays] gi|195622062|gb|ACG3... 52 5e-11
ref|NP_001130710.1| hypothetical protein [Zea mays] gi|194689906... 52 5e-11
tpg|DAA43879.1| TPA: hypothetical protein ZEAMMB73_621483 [Zea m... 52 6e-11
ref|NP_001173310.1| Os03g0207250 [Oryza sativa Japonica Group] g... 51 7e-11
ref|NP_001190137.1| mitochondrial ribosomal protein L51/S25/CI-B... 52 9e-11
ref|NP_191524.1| mitochondrial ribosomal protein L51/S25/CI-B8 f... 52 9e-11
ref|XP_002876517.1| mitochondrial ribosomal protein L51/S25/CI-B... 52 9e-11
gb|EMJ27055.1| hypothetical protein PRUPE_ppa013515mg [Prunus pe... 50 9e-11
ref|XP_006649598.1| PREDICTED: 54S ribosomal protein L51, mitoch... 50 1e-10
ref|XP_004510556.1| PREDICTED: 54S ribosomal protein L51, mitoch... 50 2e-10
gb|AFK38190.1| unknown [Medicago truncatula] 50 2e-10
ref|XP_003627415.1| Mitochondrial ribosomal protein L43 [Medicag... 50 2e-10
ref|XP_004985267.1| PREDICTED: 54S ribosomal protein L51, mitoch... 50 3e-10
ref|XP_002330707.1| predicted protein [Populus trichocarpa] 50 3e-10
gb|ACG40225.1| mitochondrial ribosomal protein L43 [Zea mays] 49 3e-10
gb|EOY04682.1| Mitochondrial ribosomal protein L51/S25/CI-B8 fam... 49 3e-10
>ref|XP_004307034.1| PREDICTED: 54S ribosomal protein L51, mitochondrial-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 124
Score = 54.3 bits (129), Expect(2) = 6e-12
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCVK++ EE+L C+T+LRNSLGRKVVKL T
Sbjct: 72 ERVVCVKNMDPEEVLQCATRLRNSLGRKVVKLRT 105
Score = 41.6 bits (96), Expect(2) = 6e-12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELK 275
RHVTKHPSVQGTWTT++K
Sbjct: 106 RHVTKHPSVQGTWTTDIK 123
>ref|XP_004307035.1| PREDICTED: 54S ribosomal protein L51, mitochondrial-like isoform 2
[Fragaria vesca subsp. vesca]
gi|470142691|ref|XP_004307036.1| PREDICTED: 54S
ribosomal protein L51, mitochondrial-like isoform 3
[Fragaria vesca subsp. vesca]
gi|470142693|ref|XP_004307037.1| PREDICTED: 54S
ribosomal protein L51, mitochondrial-like isoform 4
[Fragaria vesca subsp. vesca]
Length = 119
Score = 54.3 bits (129), Expect(2) = 7e-12
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCVK++ EE+L C+T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVKNMDPEEVLQCATRLRNSLGRKVVKLRT 100
Score = 41.6 bits (96), Expect(2) = 7e-12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELK 275
RHVTKHPSVQGTWTT++K
Sbjct: 101 RHVTKHPSVQGTWTTDIK 118
>ref|XP_002465669.1| hypothetical protein SORBIDRAFT_01g043440 [Sorghum bicolor]
gi|241919523|gb|EER92667.1| hypothetical protein
SORBIDRAFT_01g043440 [Sorghum bicolor]
Length = 119
Score = 51.6 bits (122), Expect(2) = 5e-11
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCV++L EEILL +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVRNLPPEEILLQATRLRNSLGRKVVKLRT 100
Score = 41.2 bits (95), Expect(2) = 5e-11
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELKL 272
RHVTK PSVQGTWTTELK+
Sbjct: 101 RHVTKRPSVQGTWTTELKM 119
>ref|XP_002438166.1| hypothetical protein SORBIDRAFT_10g009060 [Sorghum bicolor]
gi|241916389|gb|EER89533.1| hypothetical protein
SORBIDRAFT_10g009060 [Sorghum bicolor]
gi|414865320|tpg|DAA43877.1| TPA: ribosomal protein L43
isoform 1 [Zea mays] gi|414865321|tpg|DAA43878.1| TPA:
ribosomal protein L43 isoform 2 [Zea mays]
Length = 119
Score = 51.6 bits (122), Expect(2) = 5e-11
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCV++L EEILL +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVRNLPPEEILLQATRLRNSLGRKVVKLRT 100
Score = 41.2 bits (95), Expect(2) = 5e-11
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELKL 272
RHVTK PSVQGTWTTELK+
Sbjct: 101 RHVTKRPSVQGTWTTELKM 119
>ref|NP_001148774.1| LOC100282391 [Zea mays] gi|195622062|gb|ACG32861.1| mitochondrial
ribosomal protein L43 [Zea mays]
Length = 119
Score = 51.6 bits (122), Expect(2) = 5e-11
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCV++L EEILL +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVRNLPPEEILLQATKLRNSLGRKVVKLRT 100
Score = 41.2 bits (95), Expect(2) = 5e-11
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELKL 272
RHVTK PSVQGTWTTELK+
Sbjct: 101 RHVTKRPSVQGTWTTELKM 119
>ref|NP_001130710.1| hypothetical protein [Zea mays] gi|194689906|gb|ACF79037.1| unknown
[Zea mays] gi|413956633|gb|AFW89282.1| hypothetical
protein ZEAMMB73_180611 [Zea mays]
Length = 119
Score = 51.6 bits (122), Expect(2) = 5e-11
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCV++L EEILL +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVRNLPPEEILLQATRLRNSLGRKVVKLRT 100
Score = 41.2 bits (95), Expect(2) = 5e-11
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELKL 272
RHVTK PSVQGTWTTELK+
Sbjct: 101 RHVTKRPSVQGTWTTELKM 119
>tpg|DAA43879.1| TPA: hypothetical protein ZEAMMB73_621483 [Zea mays]
Length = 90
Score = 51.6 bits (122), Expect(2) = 6e-11
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCV++L EEILL +T+LRNSLGRKVVKL T
Sbjct: 38 ERVVCVRNLPPEEILLQATRLRNSLGRKVVKLRT 71
Score = 41.2 bits (95), Expect(2) = 6e-11
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELKL 272
RHVTK PSVQGTWTTELK+
Sbjct: 72 RHVTKRPSVQGTWTTELKM 90
>ref|NP_001173310.1| Os03g0207250 [Oryza sativa Japonica Group]
gi|26006491|gb|AAN77300.1| Unknown protein [Oryza sativa
Japonica Group] gi|108706764|gb|ABF94559.1|
mitochondrial ribosomal protein L51/S25/CI-B8 family
protein, putative, expressed [Oryza sativa Japonica
Group] gi|108706765|gb|ABF94560.1| mitochondrial
ribosomal protein L51/S25/CI-B8 family protein,
putative, expressed [Oryza sativa Japonica Group]
gi|125542835|gb|EAY88974.1| hypothetical protein
OsI_10460 [Oryza sativa Indica Group]
gi|125585334|gb|EAZ25998.1| hypothetical protein
OsJ_09851 [Oryza sativa Japonica Group]
gi|215768870|dbj|BAH01099.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255674301|dbj|BAH92038.1| Os03g0207250 [Oryza sativa
Japonica Group]
Length = 119
Score = 51.2 bits (121), Expect(2) = 7e-11
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCV++L+ E+ILL +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVRNLAPEDILLQATRLRNSLGRKVVKLRT 100
Score = 41.2 bits (95), Expect(2) = 7e-11
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELKL 272
RHVTK PSVQGTWTTELK+
Sbjct: 101 RHVTKRPSVQGTWTTELKM 119
>ref|NP_001190137.1| mitochondrial ribosomal protein L51/S25/CI-B8 family protein
[Arabidopsis thaliana] gi|332646430|gb|AEE79951.1|
mitochondrial ribosomal protein L51/S25/CI-B8 family
protein [Arabidopsis thaliana]
Length = 146
Score = 52.0 bits (123), Expect(2) = 9e-11
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCVK++ EE+LL +T+LRNSLGRKVVKL T
Sbjct: 94 ERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRT 127
Score = 40.0 bits (92), Expect(2) = 9e-11
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELK 275
RHVTKHPSVQGTWTT +K
Sbjct: 128 RHVTKHPSVQGTWTTAVK 145
>ref|NP_191524.1| mitochondrial ribosomal protein L51/S25/CI-B8 family protein
[Arabidopsis thaliana] gi|6996301|emb|CAB75462.1|
putative protein [Arabidopsis thaliana]
gi|21617971|gb|AAM67021.1| unknown [Arabidopsis
thaliana] gi|27808540|gb|AAO24550.1| At3g59650
[Arabidopsis thaliana] gi|110743592|dbj|BAE99633.1|
hypothetical protein [Arabidopsis thaliana]
gi|332646429|gb|AEE79950.1| mitochondrial ribosomal
protein L51/S25/CI-B8 family protein [Arabidopsis
thaliana]
Length = 119
Score = 52.0 bits (123), Expect(2) = 9e-11
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCVK++ EE+LL +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRT 100
Score = 40.0 bits (92), Expect(2) = 9e-11
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELK 275
RHVTKHPSVQGTWTT +K
Sbjct: 101 RHVTKHPSVQGTWTTAVK 118
>ref|XP_002876517.1| mitochondrial ribosomal protein L51/S25/CI-B8 family protein
[Arabidopsis lyrata subsp. lyrata]
gi|565468360|ref|XP_006292060.1| hypothetical protein
CARUB_v10018255mg [Capsella rubella]
gi|297322355|gb|EFH52776.1| mitochondrial ribosomal
protein L51/S25/CI-B8 family protein [Arabidopsis lyrata
subsp. lyrata] gi|482560767|gb|EOA24958.1| hypothetical
protein CARUB_v10018255mg [Capsella rubella]
Length = 119
Score = 52.0 bits (123), Expect(2) = 9e-11
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCVK++ EE+LL +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRT 100
Score = 40.0 bits (92), Expect(2) = 9e-11
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELK 275
RHVTKHPSVQGTWTT +K
Sbjct: 101 RHVTKHPSVQGTWTTAVK 118
>gb|EMJ27055.1| hypothetical protein PRUPE_ppa013515mg [Prunus persica]
Length = 119
Score = 50.4 bits (119), Expect(2) = 9e-11
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCVK++ EE+L +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVKNMDPEEVLQYATRLRNSLGRKVVKLKT 100
Score = 41.6 bits (96), Expect(2) = 9e-11
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -3
Query: 337 IEYRHVTKHPSVQGTWTTELK 275
++ RHVTKHPSVQGTWTT++K
Sbjct: 98 LKTRHVTKHPSVQGTWTTDVK 118
>ref|XP_006649598.1| PREDICTED: 54S ribosomal protein L51, mitochondrial-like [Oryza
brachyantha]
Length = 119
Score = 50.4 bits (119), Expect(2) = 1e-10
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCV++L E+ILL +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVRNLPPEDILLQATRLRNSLGRKVVKLRT 100
Score = 41.2 bits (95), Expect(2) = 1e-10
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELKL 272
RHVTK PSVQGTWTTELK+
Sbjct: 101 RHVTKRPSVQGTWTTELKM 119
>ref|XP_004510556.1| PREDICTED: 54S ribosomal protein L51, mitochondrial-like [Cicer
arietinum]
Length = 119
Score = 50.1 bits (118), Expect(2) = 2e-10
Identities = 22/34 (64%), Positives = 31/34 (91%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCV+++ +EE+LL +T+LRN+LGRKV+KL T
Sbjct: 67 ERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRT 100
Score = 41.2 bits (95), Expect(2) = 2e-10
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELK 275
RHVTKHPSVQGTWTT LK
Sbjct: 101 RHVTKHPSVQGTWTTALK 118
>gb|AFK38190.1| unknown [Medicago truncatula]
Length = 119
Score = 49.7 bits (117), Expect(2) = 2e-10
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
+RVVCVK++ EEILL +T+LRN+LGRKV+KL T
Sbjct: 67 DRVVCVKNMDPEEILLHATRLRNALGRKVIKLRT 100
Score = 41.2 bits (95), Expect(2) = 2e-10
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELK 275
RHVTKHPSVQGTWTT LK
Sbjct: 101 RHVTKHPSVQGTWTTALK 118
>ref|XP_003627415.1| Mitochondrial ribosomal protein L43 [Medicago truncatula]
gi|355521437|gb|AET01891.1| Mitochondrial ribosomal
protein L43 [Medicago truncatula]
Length = 119
Score = 49.7 bits (117), Expect(2) = 2e-10
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
+RVVCVK++ EEILL +T+LRN+LGRKV+KL T
Sbjct: 67 DRVVCVKNMDPEEILLHATRLRNALGRKVIKLRT 100
Score = 41.2 bits (95), Expect(2) = 2e-10
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELK 275
RHVTKHPSVQGTWTT LK
Sbjct: 101 RHVTKHPSVQGTWTTALK 118
>ref|XP_004985267.1| PREDICTED: 54S ribosomal protein L51, mitochondrial-like [Setaria
italica]
Length = 119
Score = 50.4 bits (119), Expect(2) = 3e-10
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCV++L E+ILL +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVRNLPPEDILLQATRLRNSLGRKVVKLRT 100
Score = 40.0 bits (92), Expect(2) = 3e-10
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELKL 272
RHVTK PSVQGTWTT+LK+
Sbjct: 101 RHVTKRPSVQGTWTTDLKM 119
>ref|XP_002330707.1| predicted protein [Populus trichocarpa]
Length = 119
Score = 50.4 bits (119), Expect(2) = 3e-10
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCVK+L+SE++LL +T+LRN+LGRKV KL T
Sbjct: 67 ERVVCVKNLASEDVLLHATRLRNALGRKVKKLPT 100
Score = 40.0 bits (92), Expect(2) = 3e-10
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELK 275
RHVTKHPSVQGTWTT+++
Sbjct: 101 RHVTKHPSVQGTWTTDVR 118
>gb|ACG40225.1| mitochondrial ribosomal protein L43 [Zea mays]
Length = 119
Score = 49.3 bits (116), Expect(2) = 3e-10
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERVVCV++L EILL +T+LRNSLGRKVVKL T
Sbjct: 67 ERVVCVRNLPPXEILLQATRLRNSLGRKVVKLRT 100
Score = 41.2 bits (95), Expect(2) = 3e-10
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 328 RHVTKHPSVQGTWTTELKL 272
RHVTK PSVQGTWTTELK+
Sbjct: 101 RHVTKRPSVQGTWTTELKM 119
>gb|EOY04682.1| Mitochondrial ribosomal protein L51/S25/CI-B8 family protein
[Theobroma cacao]
Length = 119
Score = 48.9 bits (115), Expect(2) = 3e-10
Identities = 22/34 (64%), Positives = 31/34 (91%)
Frame = -1
Query: 429 ERVVCVKSLSSEEILLCSTQLRNSLGRKVVKLST 328
ERV+CVK+++ E+ILL +++LRN+LGRKVVKL T
Sbjct: 67 ERVICVKNMTPEDILLHASRLRNALGRKVVKLKT 100
Score = 41.6 bits (96), Expect(2) = 3e-10
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -3
Query: 337 IEYRHVTKHPSVQGTWTTELK 275
++ RHVTKHPSVQGTWTT++K
Sbjct: 98 LKTRHVTKHPSVQGTWTTDVK 118