BLASTX nr result
ID: Catharanthus23_contig00024690
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00024690 (359 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus] 141 8e-32 emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha... 141 8e-32 ref|XP_006341407.1| PREDICTED: ABC transporter C family member 1... 61 2e-07 ref|XP_004236445.1| PREDICTED: ABC transporter C family member 1... 59 5e-07 >gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus] Length = 296 Score = 141 bits (356), Expect = 8e-32 Identities = 75/83 (90%), Positives = 75/83 (90%) Frame = -1 Query: 359 FSNIVLGFGANMATLIVIVLVGVTXXXXXXXXRIHLSAKILLFTVPALGAFVSFFEIVVL 180 FSNIVLGFGANMATLIVIVLVGVT RIHLSAKILLFTVPALGAFVSFFEIVVL Sbjct: 24 FSNIVLGFGANMATLIVIVLVGVTRRSGRRSRRIHLSAKILLFTVPALGAFVSFFEIVVL 83 Query: 179 LRKIVGGYPFAFQEYLFPGSLFG 111 LRKIVGGYPFAFQEYLFPGSLFG Sbjct: 84 LRKIVGGYPFAFQEYLFPGSLFG 106 >emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus] Length = 1457 Score = 141 bits (356), Expect = 8e-32 Identities = 75/83 (90%), Positives = 75/83 (90%) Frame = -1 Query: 359 FSNIVLGFGANMATLIVIVLVGVTXXXXXXXXRIHLSAKILLFTVPALGAFVSFFEIVVL 180 FSNIVLGFGANMATLIVIVLVGVT RIHLSAKILLFTVPALGAFVSFFEIVVL Sbjct: 24 FSNIVLGFGANMATLIVIVLVGVTRRSGRRSRRIHLSAKILLFTVPALGAFVSFFEIVVL 83 Query: 179 LRKIVGGYPFAFQEYLFPGSLFG 111 LRKIVGGYPFAFQEYLFPGSLFG Sbjct: 84 LRKIVGGYPFAFQEYLFPGSLFG 106 >ref|XP_006341407.1| PREDICTED: ABC transporter C family member 13-like [Solanum tuberosum] Length = 1464 Score = 60.8 bits (146), Expect = 2e-07 Identities = 30/82 (36%), Positives = 51/82 (62%) Frame = -1 Query: 359 FSNIVLGFGANMATLIVIVLVGVTXXXXXXXXRIHLSAKILLFTVPALGAFVSFFEIVVL 180 FSN+VLGFGAN+ T++++ +G R+ + AK+ L +PALGA ++ ++VVL Sbjct: 24 FSNLVLGFGANILTIVLVAAIGAGKRSVKDGNRVSVLAKVFLHLIPALGAIMALCDMVVL 83 Query: 179 LRKIVGGYPFAFQEYLFPGSLF 114 ++K++ + E+LF S F Sbjct: 84 IKKMLDISHVQYHEWLFRFSQF 105 >ref|XP_004236445.1| PREDICTED: ABC transporter C family member 13-like [Solanum lycopersicum] Length = 1464 Score = 59.3 bits (142), Expect = 5e-07 Identities = 28/77 (36%), Positives = 48/77 (62%) Frame = -1 Query: 359 FSNIVLGFGANMATLIVIVLVGVTXXXXXXXXRIHLSAKILLFTVPALGAFVSFFEIVVL 180 FSN+VLGFGAN+ T++++ +G RI + A + L +PALGA ++ ++VVL Sbjct: 24 FSNLVLGFGANILTIVLVAAIGAGKRSSKDGSRISVLANVFLHLIPALGASMALCDLVVL 83 Query: 179 LRKIVGGYPFAFQEYLF 129 ++K++ + E+LF Sbjct: 84 IKKMLDSSHVQYHEWLF 100