BLASTX nr result

ID: Catharanthus23_contig00024639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00024639
         (498 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234195.1| extracellular ribonuclease LE precursor [Sol...    73   2e-11
pdb|1DIX|A Chain A, Crystal Structure Of Rnase Le                      73   2e-11
emb|CAB40354.1| ribonuclease T2 [Solanum lycopersicum]                 73   2e-11
ref|XP_006355102.1| PREDICTED: extracellular ribonuclease LE-lik...    72   4e-11
gb|AAA21135.1| RNase NE [Nicotiana alata]                              71   9e-11
dbj|BAA95448.1| RNase [Nicotiana tabacum]                              71   9e-11
dbj|BAC77613.1| ribonuclease NW [Nicotiana glutinosa]                  71   9e-11
pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa...    71   9e-11
gb|ACV83770.1| RNase Phy1, partial [Petunia x hybrida]                 70   2e-10
gb|EXB69695.1| Extracellular ribonuclease LE [Morus notabilis]         68   5e-10
dbj|BAO05320.1| S-like ribonuclease [Sarracenia leucophylla]           67   9e-10
ref|XP_004237041.1| PREDICTED: intracellular ribonuclease LX-lik...    67   3e-09
ref|XP_002892796.1| ribonuclease T2 family protein [Arabidopsis ...    65   3e-09
ref|XP_006827258.1| hypothetical protein AMTR_s00010p00262550 [A...    65   6e-09
ref|XP_002522442.1| ribonuclease t2, putative [Ricinus communis]...    65   6e-09
gb|AAC49326.1| wounding-induced ribonuclease gene [Zinnia violacea]    64   7e-09
ref|XP_006344331.1| PREDICTED: ribonuclease 1-like [Solanum tube...    65   9e-09
gb|EMS55779.1| Ribonuclease 3 [Triticum urartu]                        64   1e-08
gb|AAS07016.1| S-like RNase [Triticum aestivum]                        64   1e-08
ref|XP_002316136.1| hypothetical protein POPTR_0010s17580g [Popu...    65   1e-08

>ref|NP_001234195.1| extracellular ribonuclease LE precursor [Solanum lycopersicum]
           gi|1710615|sp|P80022.2|RNLE_SOLLC RecName:
           Full=Extracellular ribonuclease LE; Short=RNase LE;
           Flags: Precursor gi|895855|emb|CAA55895.1| ribonuclease
           [Solanum lycopersicum] gi|4582638|emb|CAB40353.1|
           ribonuclease T2 [Solanum lycopersicum]
           gi|31338465|emb|CAD60451.1| ribonuclease T2 [Solanum
           lycopersicum]
          Length = 230

 Score = 72.8 bits (177), Expect(2) = 2e-11
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K+ CC PTTGKPA++F IHGLWPN N  T+P+ C+ NS YDQ+++++ I
Sbjct: 46  KQSCCYPTTGKPAADFGIHGLWPNNNDGTYPSNCDPNSPYDQSQISDLI 94



 Score = 21.2 bits (43), Expect(2) = 2e-11
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 37  QWPGSYCDTKQ 47


>pdb|1DIX|A Chain A, Crystal Structure Of Rnase Le
          Length = 208

 Score = 72.8 bits (177), Expect(2) = 2e-11
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K+ CC PTTGKPA++F IHGLWPN N  T+P+ C+ NS YDQ+++++ I
Sbjct: 24  KQSCCYPTTGKPAADFGIHGLWPNNNDGTYPSNCDPNSPYDQSQISDLI 72



 Score = 21.2 bits (43), Expect(2) = 2e-11
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 15  QWPGSYCDTKQ 25


>emb|CAB40354.1| ribonuclease T2 [Solanum lycopersicum]
          Length = 198

 Score = 72.8 bits (177), Expect(2) = 2e-11
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K+ CC PTTGKPA++F IHGLWPN N  T+P+ C+ NS YDQ+++++ I
Sbjct: 46  KQSCCYPTTGKPAADFGIHGLWPNNNDGTYPSNCDPNSPYDQSQISDLI 94



 Score = 21.2 bits (43), Expect(2) = 2e-11
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 37  QWPGSYCDTKQ 47


>ref|XP_006355102.1| PREDICTED: extracellular ribonuclease LE-like [Solanum tuberosum]
          Length = 230

 Score = 72.0 bits (175), Expect(2) = 4e-11
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K+ CC PTTGKPA++F IHGLWPN N  T+P+ C+ N+ YDQ++V++ I
Sbjct: 46  KQSCCYPTTGKPAADFGIHGLWPNNNDGTYPSNCDPNNPYDQSQVSDLI 94



 Score = 21.2 bits (43), Expect(2) = 4e-11
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 37  QWPGSYCDTKQ 47


>gb|AAA21135.1| RNase NE [Nicotiana alata]
          Length = 231

 Score = 70.9 bits (172), Expect(2) = 9e-11
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K+ CC P TGKPAS+F IHGLWPN N  ++P+ C+ NS YDQ++V++ I
Sbjct: 48  KQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYDQSQVSDLI 96



 Score = 21.2 bits (43), Expect(2) = 9e-11
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 39  QWPGSYCDTKQ 49


>dbj|BAA95448.1| RNase [Nicotiana tabacum]
          Length = 229

 Score = 70.9 bits (172), Expect(2) = 9e-11
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K+ CC P TGKPAS+F IHGLWPN N  ++P+ C+ NS YDQ++V++ I
Sbjct: 46  KQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYDQSQVSDLI 94



 Score = 21.2 bits (43), Expect(2) = 9e-11
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 37  QWPGSYCDTKQ 47


>dbj|BAC77613.1| ribonuclease NW [Nicotiana glutinosa]
          Length = 229

 Score = 70.9 bits (172), Expect(2) = 9e-11
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K+ CC P TGKPAS+F IHGLWPN N  ++P+ C+ NS YDQ++V++ I
Sbjct: 46  KQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYDQSQVSDLI 94



 Score = 21.2 bits (43), Expect(2) = 9e-11
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 37  QWPGSYCDTKQ 47


>pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa Ribonuclease
           Nw gi|34810727|pdb|1IYB|B Chain B, Crystal Structure Of
           The Nicotiana Glutinosa Ribonuclease Nw
          Length = 208

 Score = 70.9 bits (172), Expect(2) = 9e-11
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K+ CC P TGKPAS+F IHGLWPN N  ++P+ C+ NS YDQ++V++ I
Sbjct: 25  KQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYDQSQVSDLI 73



 Score = 21.2 bits (43), Expect(2) = 9e-11
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 16  QWPGSYCDTKQ 26


>gb|ACV83770.1| RNase Phy1, partial [Petunia x hybrida]
          Length = 165

 Score = 69.7 bits (169), Expect(2) = 2e-10
 Identities = 27/49 (55%), Positives = 39/49 (79%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K+ CC PTTGKP+S+F IHGLWPN N  ++P+ C+ +S YDQ++V++ I
Sbjct: 28  KQSCCYPTTGKPSSDFGIHGLWPNNNDGSYPSNCDPSSPYDQSQVSDLI 76



 Score = 21.2 bits (43), Expect(2) = 2e-10
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 19  QWPGSYCDTKQ 29


>gb|EXB69695.1| Extracellular ribonuclease LE [Morus notabilis]
          Length = 228

 Score = 68.2 bits (165), Expect(2) = 5e-10
 Identities = 25/47 (53%), Positives = 38/47 (80%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTN 330
           K+ CC PTTGKPA++F IHGLWPN N  T+P+ C+ N+ +DQ+++++
Sbjct: 44  KQSCCYPTTGKPAADFGIHGLWPNYNDGTYPSNCDPNNPFDQSEISD 90



 Score = 21.2 bits (43), Expect(2) = 5e-10
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 35  QWPGSYCDTKQ 45


>dbj|BAO05320.1| S-like ribonuclease [Sarracenia leucophylla]
          Length = 226

 Score = 67.4 bits (163), Expect(2) = 9e-10
 Identities = 24/49 (48%), Positives = 39/49 (79%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K+ CC PTTGKPA++F IHGLWPN N  ++P+ C+ N+ Y+Q+++++ +
Sbjct: 43  KQSCCYPTTGKPATDFGIHGLWPNYNDGSYPSNCDTNNPYNQSEISDLV 91



 Score = 21.2 bits (43), Expect(2) = 9e-10
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 34  QWPGSYCDTKQ 44


>ref|XP_004237041.1| PREDICTED: intracellular ribonuclease LX-like [Solanum
           lycopersicum]
          Length = 240

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K +CC PT GKPA +F IHGLWPN    +FP  CN+N  YD+T++++ I
Sbjct: 42  KIKCCYPTNGKPAEDFGIHGLWPNYFNGSFPKSCNKNVRYDETQISDLI 90


>ref|XP_002892796.1| ribonuclease T2 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338638|gb|EFH69055.1| ribonuclease T2 family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 226

 Score = 65.1 bits (157), Expect(2) = 3e-09
 Identities = 23/49 (46%), Positives = 39/49 (79%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K  CC PT+GKPA++F IHGLWPN NG ++P+ C+ +S +D++++++ +
Sbjct: 43  KRACCYPTSGKPAADFGIHGLWPNYNGGSWPSNCDPDSQFDRSQISDLV 91



 Score = 21.6 bits (44), Expect(2) = 3e-09
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PG+YC TKR
Sbjct: 34  QWPGAYCDTKR 44


>ref|XP_006827258.1| hypothetical protein AMTR_s00010p00262550 [Amborella trichopoda]
           gi|548831687|gb|ERM94495.1| hypothetical protein
           AMTR_s00010p00262550 [Amborella trichopoda]
          Length = 228

 Score = 65.1 bits (157), Expect(2) = 6e-09
 Identities = 25/49 (51%), Positives = 37/49 (75%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCI 324
           K  CC PTTGKPA+NF+IHGLWPN N  ++P+ C+ +S +  ++V++ I
Sbjct: 40  KASCCYPTTGKPAANFSIHGLWPNYNDGSYPSNCDPDSQFQPSEVSDLI 88



 Score = 20.8 bits (42), Expect(2) = 6e-09
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 496 Q*PGSYCRTK 467
           Q PGSYC TK
Sbjct: 31  QWPGSYCDTK 40


>ref|XP_002522442.1| ribonuclease t2, putative [Ricinus communis]
           gi|223538327|gb|EEF39934.1| ribonuclease t2, putative
           [Ricinus communis]
          Length = 226

 Score = 64.7 bits (156), Expect(2) = 6e-09
 Identities = 26/54 (48%), Positives = 41/54 (75%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCIDVTAS 309
           K+ CC PTTGKPA++F IHGLWPN +  ++P+ C+ N+ ++Q K++   D+T+S
Sbjct: 43  KQSCCYPTTGKPAADFGIHGLWPNYDDGSYPSNCDSNNPFNQKKIS---DLTSS 93



 Score = 21.2 bits (43), Expect(2) = 6e-09
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 34  QWPGSYCDTKQ 44


>gb|AAC49326.1| wounding-induced ribonuclease gene [Zinnia violacea]
          Length = 229

 Score = 64.3 bits (155), Expect(2) = 7e-09
 Identities = 27/60 (45%), Positives = 42/60 (70%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCIDVTASKIIECP 291
           K+ CC P+TGKPAS+F IHGLWPN N  ++P+ C+ ++ +D +K++   D+T+    E P
Sbjct: 46  KQGCCYPSTGKPASDFGIHGLWPNRNDGSYPSNCDSSNPFDASKIS---DLTSHMQSEWP 102



 Score = 21.2 bits (43), Expect(2) = 7e-09
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 37  QWPGSYCDTKQ 47


>ref|XP_006344331.1| PREDICTED: ribonuclease 1-like [Solanum tuberosum]
          Length = 236

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKV 336
           K  CC PTTGKPA +F IHGLWP  N +TFP+ CN NS +D+ ++
Sbjct: 42  KAACCYPTTGKPALDFGIHGLWPVYNNHTFPSNCNGNSPFDENQI 86


>gb|EMS55779.1| Ribonuclease 3 [Triticum urartu]
          Length = 254

 Score = 63.5 bits (153), Expect(2) = 1e-08
 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCIDVTASK--IIE 297
           K+ CC P +GKPA++F IHGLWPN +  ++P  CN +S++D +KV++ +    S    + 
Sbjct: 70  KQSCCYPRSGKPAADFGIHGLWPNRDDGSYPQNCNPDSTFDPSKVSDILSSLRSSWPTLA 129

Query: 296 CP 291
           CP
Sbjct: 130 CP 131



 Score = 21.2 bits (43), Expect(2) = 1e-08
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 61  QWPGSYCDTKQ 71


>gb|AAS07016.1| S-like RNase [Triticum aestivum]
          Length = 229

 Score = 63.5 bits (153), Expect(2) = 1e-08
 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = -2

Query: 470 KERCCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTNCIDVTASK--IIE 297
           K+ CC P +GKPA++F IHGLWPN +  ++P  CN +S++D +KV++ +    S    + 
Sbjct: 45  KQSCCYPRSGKPAADFGIHGLWPNRDDGSYPQNCNPDSAFDPSKVSDILSSLRSSWPTLA 104

Query: 296 CP 291
           CP
Sbjct: 105 CP 106



 Score = 21.2 bits (43), Expect(2) = 1e-08
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 496 Q*PGSYCRTKR 464
           Q PGSYC TK+
Sbjct: 36  QWPGSYCDTKQ 46


>ref|XP_002316136.1| hypothetical protein POPTR_0010s17580g [Populus trichocarpa]
           gi|222865176|gb|EEF02307.1| hypothetical protein
           POPTR_0010s17580g [Populus trichocarpa]
          Length = 226

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -2

Query: 461 CCVPTTGKPASNFTIHGLWPNTNGNTFPAFCNRNSSYDQTKVTN 330
           CC PTTGKPA++F IHGLWPN N  T+P  C+ +S YD  KV +
Sbjct: 46  CCYPTTGKPAADFGIHGLWPNYNDGTYPKNCDASSPYDPKKVAD 89


Top