BLASTX nr result
ID: Catharanthus23_contig00024593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00024593
(241 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006305506.1| hypothetical protein CARUB_v10009971mg [Caps... 57 2e-06
ref|XP_006305505.1| hypothetical protein CARUB_v10009971mg [Caps... 57 2e-06
ref|NP_174469.1| histidine biosynthesis bifunctional protein his... 57 2e-06
ref|XP_002893693.1| AT-IE [Arabidopsis lyrata subsp. lyrata] gi|... 57 2e-06
ref|XP_004248357.1| PREDICTED: histidine biosynthesis bifunction... 57 3e-06
ref|XP_006415287.1| hypothetical protein EUTSA_v10008417mg [Eutr... 56 6e-06
ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunction... 56 6e-06
gb|AAT74591.1| phosphoribosyl-ATP pyrophosphohydrolase/phosphori... 56 6e-06
ref|XP_006370154.1| Histidine biosynthesis bifunctional protein ... 55 1e-05
ref|XP_002330733.1| predicted protein [Populus trichocarpa] 55 1e-05
gb|ABK93460.1| unknown [Populus trichocarpa] 55 1e-05
>ref|XP_006305506.1| hypothetical protein CARUB_v10009971mg [Capsella rubella]
gi|482574217|gb|EOA38404.1| hypothetical protein
CARUB_v10009971mg [Capsella rubella]
Length = 278
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
GTPDGPTCHTG+ETCYYTSV D LNN E
Sbjct: 135 GTPDGPTCHTGAETCYYTSVLDQLNNDE 162
>ref|XP_006305505.1| hypothetical protein CARUB_v10009971mg [Capsella rubella]
gi|482574216|gb|EOA38403.1| hypothetical protein
CARUB_v10009971mg [Capsella rubella]
Length = 201
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
GTPDGPTCHTG+ETCYYTSV D LNN E
Sbjct: 58 GTPDGPTCHTGAETCYYTSVLDQLNNDE 85
>ref|NP_174469.1| histidine biosynthesis bifunctional protein hisIE [Arabidopsis
thaliana] gi|11132859|sp|O82768.1|HIS2_ARATH RecName:
Full=Histidine biosynthesis bifunctional protein hisIE,
chloroplastic; AltName: Full=Protein HISTIDINE
BIOSYNTHESIS 2; Includes: RecName:
Full=Phosphoribosyl-AMP cyclohydrolase; Short=PRA-CH;
Includes: RecName: Full=Phosphoribosyl-ATP
pyrophosphatase; Short=PRA-PH; Flags: Precursor
gi|12321304|gb|AAG50725.1|AC079041_18 phosphoribosyl-ATP
pyrophosphohydrolase (At-IE) [Arabidopsis thaliana]
gi|3461884|dbj|BAA32528.1| phosphoribosyl-ATP
pyrophosphohydrolase [Arabidopsis thaliana]
gi|3461886|dbj|BAA32529.1| phosphoribosyl-ATP
pyrophosphohydrolase [Arabidopsis thaliana]
gi|15028395|gb|AAK76674.1| putative phosphoribosyl-ATP
pyrophosphohydrolase At-IE [Arabidopsis thaliana]
gi|19310753|gb|AAL85107.1| putative phosphoribosyl-ATP
pyrophosphohydrolase At-IE [Arabidopsis thaliana]
gi|21554409|gb|AAM63514.1| phosphoribosyl-ATP
pyrophosphohydrolase At-IE [Arabidopsis thaliana]
gi|332193287|gb|AEE31408.1| histidine biosynthesis
bifunctional protein hisIE [Arabidopsis thaliana]
Length = 281
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
GTPDGPTCHTG ETCYYTSV D LNN E
Sbjct: 138 GTPDGPTCHTGEETCYYTSVFDQLNNDE 165
>ref|XP_002893693.1| AT-IE [Arabidopsis lyrata subsp. lyrata]
gi|297339535|gb|EFH69952.1| AT-IE [Arabidopsis lyrata
subsp. lyrata]
Length = 281
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
GTPDGPTCHTG ETCYYTSV D LNN E
Sbjct: 138 GTPDGPTCHTGEETCYYTSVFDQLNNDE 165
>ref|XP_004248357.1| PREDICTED: histidine biosynthesis bifunctional protein hisIE,
chloroplastic-like [Solanum lycopersicum]
Length = 280
Score = 56.6 bits (135), Expect = 3e-06
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
G PDGPTCHTGSETCYYT VD++L +PE
Sbjct: 137 GKPDGPTCHTGSETCYYTPVDELLKHPE 164
>ref|XP_006415287.1| hypothetical protein EUTSA_v10008417mg [Eutrema salsugineum]
gi|557093058|gb|ESQ33640.1| hypothetical protein
EUTSA_v10008417mg [Eutrema salsugineum]
Length = 281
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
GTPDGPTCHTG+ETCYYTSV D LN+ E
Sbjct: 138 GTPDGPTCHTGAETCYYTSVFDQLNDDE 165
>ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunctional protein hisIE,
chloroplastic [Vitis vinifera]
gi|296082253|emb|CBI21258.3| unnamed protein product
[Vitis vinifera]
Length = 289
Score = 55.8 bits (133), Expect = 6e-06
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
G PDGPTCHTGSETCYY+SV D+L NP+
Sbjct: 143 GKPDGPTCHTGSETCYYSSVFDLLKNPQ 170
>gb|AAT74591.1| phosphoribosyl-ATP pyrophosphohydrolase/phosphoribosyl-AMP
cyclohydrolase [Alyssum lesbiacum]
Length = 179
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
GTPDGPTCHTG+ETCYYTSV D LN+ E
Sbjct: 56 GTPDGPTCHTGAETCYYTSVFDQLNDEE 83
>ref|XP_006370154.1| Histidine biosynthesis bifunctional protein hisIE [Populus
trichocarpa] gi|550349333|gb|ERP66723.1| Histidine
biosynthesis bifunctional protein hisIE [Populus
trichocarpa]
Length = 286
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
G PDGPTCHTGSETCYYTSV D+L N +
Sbjct: 144 GKPDGPTCHTGSETCYYTSVPDLLENKQ 171
>ref|XP_002330733.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
G PDGPTCHTGSETCYYTSV D+L N +
Sbjct: 144 GKPDGPTCHTGSETCYYTSVPDLLENKQ 171
>gb|ABK93460.1| unknown [Populus trichocarpa]
Length = 200
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -2
Query: 240 GTPDGPTCHTGSETCYYTSVDDVLNNPE 157
G PDGPTCHTGSETCYYTSV D+L N +
Sbjct: 58 GKPDGPTCHTGSETCYYTSVPDLLENKQ 85