BLASTX nr result
ID: Catharanthus23_contig00024573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00024573
(299 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW05017.1| hypothetical chloroplast protein [Vincetoxicum ro... 55 7e-06
gb|AGW04940.1| hypothetical chloroplast protein [Telosma cordata] 55 7e-06
gb|AGW04863.1| hypothetical chloroplast protein [Sisyranthus tri... 55 7e-06
gb|AGW04786.1| hypothetical chloroplast protein [Orthosia scoparia] 55 7e-06
gb|AGW04709.1| hypothetical chloroplast protein [Matelea biflora] 55 7e-06
gb|AGW04483.1| hypothetical chloroplast protein [Astephanus trif... 55 7e-06
gb|AGW04406.1| hypothetical chloroplast protein [Araujia sericif... 55 7e-06
gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii] 55 7e-06
ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [... 55 7e-06
ref|YP_007890417.1| hypothetical chloroplast RF2 (chloroplast) [... 55 7e-06
gb|ADD30887.1| putative RF2 protein [Nerium oleander] gi|3408071... 55 7e-06
gb|AFK81537.1| hypothetical chloroplast RF21 [Camellia taliensis] 55 1e-05
gb|AFK81516.1| hypothetical chloroplast RF21 [Camellia taliensis] 55 1e-05
ref|YP_008815248.1| hypothetical chloroplast RF21 (chloroplast) ... 55 1e-05
ref|YP_008815161.1| hypothetical chloroplast RF21 (chloroplast) ... 55 1e-05
ref|YP_008815074.1| hypothetical chloroplast RF21 (chloroplast) ... 55 1e-05
ref|YP_008814987.1| hypothetical chloroplast RF21 (chloroplast) ... 55 1e-05
ref|YP_008814900.1| hypothetical chloroplast RF21 (chloroplast) ... 55 1e-05
ref|YP_008578583.1| hypothetical chloroplast protein (chloroplas... 55 1e-05
ref|YP_008520183.1| Ycf2 (chloroplast) [Camellia taliensis] gi|5... 55 1e-05
>gb|AGW05017.1| hypothetical chloroplast protein [Vincetoxicum rossicum]
Length = 2067
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTLVNQREIQQLKERSIL
Sbjct: 217 LDSISNEDSEYHTLVNQREIQQLKERSIL 245
>gb|AGW04940.1| hypothetical chloroplast protein [Telosma cordata]
Length = 2308
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTLVNQREIQQLKERSIL
Sbjct: 402 LDSISNEDSEYHTLVNQREIQQLKERSIL 430
>gb|AGW04863.1| hypothetical chloroplast protein [Sisyranthus trichostomus]
Length = 2294
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTLVNQREIQQLKERSIL
Sbjct: 403 LDSISNEDSEYHTLVNQREIQQLKERSIL 431
>gb|AGW04786.1| hypothetical chloroplast protein [Orthosia scoparia]
Length = 2059
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTLVNQREIQQLKERSIL
Sbjct: 217 LDSISNEDSEYHTLVNQREIQQLKERSIL 245
>gb|AGW04709.1| hypothetical chloroplast protein [Matelea biflora]
Length = 1992
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTLVNQREIQQLKERSIL
Sbjct: 214 LDSISNEDSEYHTLVNQREIQQLKERSIL 242
>gb|AGW04483.1| hypothetical chloroplast protein [Astephanus triflorus]
Length = 2130
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTLVNQREIQQLKERSIL
Sbjct: 217 LDSISNEDSEYHTLVNQREIQQLKERSIL 245
>gb|AGW04406.1| hypothetical chloroplast protein [Araujia sericifera]
Length = 722
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTLVNQREIQQLKERSIL
Sbjct: 217 LDSISNEDSEYHTLVNQREIQQLKERSIL 245
>gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii]
Length = 2279
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTLVNQREIQQLKERSIL
Sbjct: 402 LDSISNEDSEYHTLVNQREIQQLKERSIL 430
>ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|511348399|ref|YP_008081328.1| hypothetical
chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|474452120|gb|AGI51188.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
gi|474452139|gb|AGI51207.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
Length = 2273
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTLVNQREIQQLKERSIL
Sbjct: 404 LDSISNEDSEYHTLVNQREIQQLKERSIL 432
>ref|YP_007890417.1| hypothetical chloroplast RF2 (chloroplast) [Ardisia polysticta]
gi|482651262|ref|YP_007890436.1| hypothetical
chloroplast RF2 (chloroplast) [Ardisia polysticta]
gi|456368014|gb|AGG36928.1| hypothetical chloroplast RF2
(chloroplast) [Ardisia polysticta]
gi|456368033|gb|AGG36947.1| hypothetical chloroplast RF2
(chloroplast) [Ardisia polysticta]
Length = 2294
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTL+NQREIQQLKERSIL
Sbjct: 404 LDSMSNEDSEYHTLINQREIQQLKERSIL 432
>gb|ADD30887.1| putative RF2 protein [Nerium oleander] gi|340807172|gb|AEK71765.1|
hypothetical chloroplast RF2 [Nerium oleander]
Length = 2278
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTLVNQREIQQLKERSIL
Sbjct: 404 LDSISNEDSEYHTLVNQREIQQLKERSIL 432
>gb|AFK81537.1| hypothetical chloroplast RF21 [Camellia taliensis]
Length = 2298
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTL+NQREIQQLKERSIL
Sbjct: 404 LDSISNEDSEYHTLINQREIQQLKERSIL 432
>gb|AFK81516.1| hypothetical chloroplast RF21 [Camellia taliensis]
Length = 2298
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTL+NQREIQQLKERSIL
Sbjct: 404 LDSISNEDSEYHTLINQREIQQLKERSIL 432
>ref|YP_008815248.1| hypothetical chloroplast RF21 (chloroplast) [Kalopanax septemlobus]
gi|563940449|ref|YP_008815267.1| hypothetical
chloroplast RF21 (chloroplast) [Kalopanax septemlobus]
gi|458599655|gb|AGG39347.1| hypothetical chloroplast
RF21 (chloroplast) [Kalopanax septemlobus]
gi|458599676|gb|AGG39368.1| hypothetical chloroplast
RF21 (chloroplast) [Kalopanax septemlobus]
Length = 2116
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTL+NQREIQQLKERSIL
Sbjct: 205 LDSISNEDSEYHTLINQREIQQLKERSIL 233
>ref|YP_008815161.1| hypothetical chloroplast RF21 (chloroplast) [Schefflera delavayi]
gi|558603152|ref|YP_008815180.1| hypothetical
chloroplast RF21 (chloroplast) [Schefflera delavayi]
gi|458599567|gb|AGG39260.1| hypothetical chloroplast
RF21 (chloroplast) [Schefflera delavayi]
gi|458599588|gb|AGG39281.1| hypothetical chloroplast
RF21 (chloroplast) [Schefflera delavayi]
Length = 2132
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTL+NQREIQQLKERSIL
Sbjct: 205 LDSISNEDSEYHTLINQREIQQLKERSIL 233
>ref|YP_008815074.1| hypothetical chloroplast RF21 (chloroplast) [Metapanax delavayi]
gi|558603064|ref|YP_008815093.1| hypothetical
chloroplast RF21 (chloroplast) [Metapanax delavayi]
gi|458599414|gb|AGG39173.1| hypothetical chloroplast
RF21 (chloroplast) [Metapanax delavayi]
gi|458599435|gb|AGG39194.1| hypothetical chloroplast
RF21 (chloroplast) [Metapanax delavayi]
Length = 2116
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTL+NQREIQQLKERSIL
Sbjct: 205 LDSISNEDSEYHTLINQREIQQLKERSIL 233
>ref|YP_008814987.1| hypothetical chloroplast RF21 (chloroplast) [Brassaiopsis hainla]
gi|558602976|ref|YP_008815006.1| hypothetical
chloroplast RF21 (chloroplast) [Brassaiopsis hainla]
gi|458599235|gb|AGG39086.1| hypothetical chloroplast
RF21 (chloroplast) [Brassaiopsis hainla]
gi|458599256|gb|AGG39107.1| hypothetical chloroplast
RF21 (chloroplast) [Brassaiopsis hainla]
Length = 2116
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTL+NQREIQQLKERSIL
Sbjct: 205 LDSISNEDSEYHTLINQREIQQLKERSIL 233
>ref|YP_008814900.1| hypothetical chloroplast RF21 (chloroplast) [Aralia undulata]
gi|563940343|ref|YP_008814919.1| hypothetical
chloroplast RF21 (chloroplast) [Aralia undulata]
gi|458599133|gb|AGG38999.1| hypothetical chloroplast
RF21 (chloroplast) [Aralia undulata]
gi|458599154|gb|AGG39020.1| hypothetical chloroplast
RF21 (chloroplast) [Aralia undulata]
Length = 2132
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTL+NQREIQQLKERSIL
Sbjct: 205 LDSISNEDSEYHTLINQREIQQLKERSIL 233
>ref|YP_008578583.1| hypothetical chloroplast protein (chloroplast) [Asclepias nivea]
gi|545719324|ref|YP_008578600.1| hypothetical
chloroplast protein (chloroplast) [Asclepias nivea]
gi|544187096|gb|AGW05034.1| hypothetical chloroplast
protein (chloroplast) [Asclepias nivea]
gi|544187097|gb|AGW05035.1| hypothetical chloroplast
protein (chloroplast) [Asclepias nivea]
Length = 2063
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNED KYHTLVNQREIQQLKERSIL
Sbjct: 217 LDSISNEDPKYHTLVNQREIQQLKERSIL 245
>ref|YP_008520183.1| Ycf2 (chloroplast) [Camellia taliensis]
gi|542688111|ref|YP_008520204.1| Ycf2 (chloroplast)
[Camellia taliensis] gi|537362670|gb|AGU44475.1| Ycf2
(chloroplast) [Camellia taliensis]
gi|537362671|gb|AGU44476.1| Ycf2 (chloroplast) [Camellia
taliensis] gi|537362940|gb|AGU44742.1| Ycf2
(chloroplast) [Camellia taliensis]
gi|537362941|gb|AGU44743.1| Ycf2 (chloroplast) [Camellia
taliensis]
Length = 2282
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 23 LDSSSNEDSKYHTLVNQREIQQLKERSIL 109
LDS SNEDS+YHTL+NQREIQQLKERSIL
Sbjct: 404 LDSISNEDSEYHTLINQREIQQLKERSIL 432