BLASTX nr result

ID: Catharanthus23_contig00023457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00023457
         (399 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618629.1| TdcA1-ORF2 protein [Medicago truncatula] gi|...    55   7e-06

>ref|XP_003618629.1| TdcA1-ORF2 protein [Medicago truncatula]
           gi|355493644|gb|AES74847.1| TdcA1-ORF2 protein [Medicago
           truncatula]
          Length = 578

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = -2

Query: 398 RSWIYTRCVPEVRELSSEFMNEVHRFVDLYLSTNHSMLDE--IRYPCVKYKYQNKLTTVV 225
           R W+Y R  P    L  +F+  V  F+  +        DE  IR PC+K + ++ +T   
Sbjct: 8   RRWMYDRTFPRRTGLKPQFVEGVDGFIS-WAWEQEICRDEGGIRCPCLKCRCRHIITDPG 66

Query: 224 ELKLHPFN*GFMPNYHNWTCHGELFLGLNVGI 129
           ++K H    GFMPNY  WT +GE+F    VG+
Sbjct: 67  DVKKHLKKVGFMPNYWVWTYNGEMFQNFGVGV 98


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