BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00023395
         (222 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79451.1| hypothetical protein VITISV_001677 [Vitis vinifera]    73   3e-11
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   73   4e-11
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               72   1e-10
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               72   1e-10
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               72   1e-10
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               72   1e-10
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]    71   2e-10
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...    70   2e-10
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...    70   4e-10
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    69   5e-10
gb|AFB73912.1| polyprotein [Citrus sinensis]                           68   1e-09
gb|AFB73911.1| polyprotein [Citrus sinensis]                           68   1e-09
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...    68   1e-09
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...    67   3e-09
emb|CAN79540.1| hypothetical protein VITISV_016973 [Vitis vinifera]    66   4e-09
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]    66   5e-09
emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera]    66   5e-09
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...    65   7e-09
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      65   7e-09
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         65   9e-09

>emb|CAN79451.1| hypothetical protein VITISV_001677 [Vitis vinifera]
          Length = 805

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 28/50 (56%), Positives = 39/50 (78%)
 Frame = -3

Query: 151 DHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGNVFIK 2
           D+WILDS C++HMTPNK WF+ ++ ++ G V MGN+  C+V GIGN+ IK
Sbjct: 143 DYWILDSACSYHMTPNKDWFNTYRSVNSGSVLMGNDASCKVAGIGNIIIK 192


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/70 (45%), Positives = 43/70 (61%)
 Frame = -3

Query: 211 DGNSMYSEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCE 32
           DG  +YSE           +D WI+DSG T+HMTP + WF  ++P+  G VFMGN++  E
Sbjct: 269 DGEVLYSEAAVSTKGKNRLTDVWIVDSGATWHMTPRRDWFCTYEPVSEGNVFMGNDHALE 328

Query: 31  VKGIGNVFIK 2
           + GIG V IK
Sbjct: 329 IVGIGTVKIK 338


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 28/70 (40%), Positives = 44/70 (62%)
 Frame = -3

Query: 211 DGNSMYSEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCE 32
           DG  +YSE           +D WI+DSG T+HMTP++ WF  ++P+  G V+MGN++  E
Sbjct: 269 DGEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALE 328

Query: 31  VKGIGNVFIK 2
           + G+G + +K
Sbjct: 329 IAGVGTIRLK 338


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 28/70 (40%), Positives = 44/70 (62%)
 Frame = -3

Query: 211 DGNSMYSEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCE 32
           DG  +YSE           +D WI+DSG T+HMTP++ WF  ++P+  G V+MGN++  E
Sbjct: 269 DGEILYSEAATSSEGERQLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALE 328

Query: 31  VKGIGNVFIK 2
           + G+G + +K
Sbjct: 329 IAGVGTIRLK 338


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 28/70 (40%), Positives = 44/70 (62%)
 Frame = -3

Query: 211 DGNSMYSEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCE 32
           DG  +YSE           +D WI+DSG T+HMTP++ WF  ++P+  G V+MGN++  E
Sbjct: 269 DGEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALE 328

Query: 31  VKGIGNVFIK 2
           + G+G + +K
Sbjct: 329 IAGVGTIRLK 338


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 28/70 (40%), Positives = 44/70 (62%)
 Frame = -3

Query: 211 DGNSMYSEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCE 32
           DG  +YSE           +D WI+DSG T+HMTP++ WF  ++P+  G V+MGN++  E
Sbjct: 269 DGEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALE 328

Query: 31  VKGIGNVFIK 2
           + G+G + +K
Sbjct: 329 IAGVGTIRLK 338


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = -3

Query: 151 DHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGNVFIK 2
           D WILDSGC++HM+PN  WFS ++P+D GKV MGN   C+V GI  + IK
Sbjct: 233 DEWILDSGCSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVVGIHXIQIK 282


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/68 (42%), Positives = 43/68 (63%)
 Frame = -3

Query: 205 NSMYSEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVK 26
           N   +E+L         SD W+LD+GCT+HM PN+ WF+ ++P+  G V MG+N  C+V 
Sbjct: 222 NKPDAELLVAYAGCVQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVA 281

Query: 25  GIGNVFIK 2
           G+G + IK
Sbjct: 282 GVGTIQIK 289


>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = -3

Query: 151 DHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGNVFIK 2
           D WILDSGCT+HM P + WF +F+ LD G V+MGN+N C+  GIG++ ++
Sbjct: 262 DEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTAGIGSIKLR 311


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = -3

Query: 151 DHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGNVFIK 2
           D WILDSGCT+HM P + WF +F+ LD G V+MGN+N C+  GIG++ ++
Sbjct: 223 DEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLR 272


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 29/70 (41%), Positives = 42/70 (60%)
 Frame = -3

Query: 211 DGNSMYSEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCE 32
           DG  +YSE           SD W++DSG T+HMT  + WF  ++P+  G V+MGN++  E
Sbjct: 270 DGEILYSEATIVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHALE 329

Query: 31  VKGIGNVFIK 2
           + GIG + IK
Sbjct: 330 IAGIGTIKIK 339


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 29/70 (41%), Positives = 42/70 (60%)
 Frame = -3

Query: 211 DGNSMYSEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCE 32
           DG  +YSE           SD W++DSG T+HMT  + WF  ++P+  G V+MGN++  E
Sbjct: 270 DGEILYSEATTVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHALE 329

Query: 31  VKGIGNVFIK 2
           + GIG + IK
Sbjct: 330 IAGIGTIKIK 339


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = -3

Query: 151 DHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGNVFIK 2
           + W+LD+GC+FHMTP K WF DFK L  G V MGN+    VKGIG++ I+
Sbjct: 283 NEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIR 332


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/50 (62%), Positives = 35/50 (70%)
 Frame = -3

Query: 151 DHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGNVFIK 2
           D WILD+GC+FHMT  K W  DFK    GKV MGN+   EVKGIG+V IK
Sbjct: 310 DTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKGIGDVRIK 359


>emb|CAN79540.1| hypothetical protein VITISV_016973 [Vitis vinifera]
          Length = 699

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/65 (49%), Positives = 36/65 (55%)
 Frame = -3

Query: 196 YSEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIG 17
           Y E L            WILDSGCTFHM PN+ WFS  +    G V MGNN  C++ GIG
Sbjct: 93  YGEHLVVSDGDSKPYKDWILDSGCTFHMCPNRDWFSTNETXSKGIVLMGNNVSCKITGIG 152

Query: 16  NVFIK 2
            V IK
Sbjct: 153 TVRIK 157


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 28/48 (58%), Positives = 33/48 (68%)
 Frame = -3

Query: 145 WILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGNVFIK 2
           WILDSGC+FHM P K WF DFK  + G V +GNN  C++ G G V IK
Sbjct: 282 WILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTGTVKIK 329


>emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera]
          Length = 437

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 28/48 (58%), Positives = 33/48 (68%)
 Frame = -3

Query: 145 WILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGNVFIK 2
           WILDSGC+FHM P K WF +FK  D G V +GNN  C++ G G V IK
Sbjct: 118 WILDSGCSFHMCPIKAWFENFKEADGGHVLLGNNKHCKILGTGTVRIK 165


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = -3

Query: 193 SEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGN 14
           +E+L         SD WILD+ CT+HM PN+ WF+ ++ +  G V MG++  CEV GIG 
Sbjct: 250 AELLVAYVGCAQTSDQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGT 309

Query: 13  VFIK 2
           V IK
Sbjct: 310 VQIK 313


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = -3

Query: 193 SEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGN 14
           +E+L         SD WILD+ CT+HM PN+ WF+ ++ +  G V MG++  CEV GIG 
Sbjct: 193 AELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGT 252

Query: 13  VFIK 2
           V IK
Sbjct: 253 VQIK 256


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = -3

Query: 193 SEVLCXXXXXXXXSDHWILDSGCTFHMTPNKHWFSDFKPLDHGKVFMGNNNVCEVKGIGN 14
           +E+L         SD WILD+ CT+HM PN+ WF+ ++ +  G V MG++  CEV GIG 
Sbjct: 284 AELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGT 343

Query: 13  VFIK 2
           V IK
Sbjct: 344 VQIK 347