BLASTX nr result

ID: Catharanthus23_contig00023209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00023209
         (222 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]    76   5e-12
gb|EOY31361.1| Pentatricopeptide repeat-containing protein isofo...    72   6e-11
gb|EOY31360.1| Pentatricopeptide repeat-containing protein isofo...    72   6e-11
ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-09
gb|EMJ26062.1| hypothetical protein PRUPE_ppa022809mg [Prunus pe...    64   3e-08

>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 35/55 (63%), Positives = 42/55 (76%)
 Frame = +2

Query: 2   DKLVAVYKGMKECGPYPNASTYNMLLNGMVSLGRLKDGIFFAKEMCSGGFVPSFT 166
           D+LV VY GMK  GPYPNAST+N+LL+GM S G L+   FFA+EM   GF+PSFT
Sbjct: 100 DELVQVYFGMKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFT 154


>gb|EOY31361.1| Pentatricopeptide repeat-containing protein isoform 2 [Theobroma
           cacao]
          Length = 720

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/54 (62%), Positives = 40/54 (74%)
 Frame = +2

Query: 5   KLVAVYKGMKECGPYPNASTYNMLLNGMVSLGRLKDGIFFAKEMCSGGFVPSFT 166
           +LV +Y GMK  GP PNAST+N LLNGM+ LG LKD IF  +EMC   FVPSF+
Sbjct: 102 ELVEMYIGMKSFGPQPNASTFNTLLNGMLRLGNLKDAIFTVEEMCRNHFVPSFS 155


>gb|EOY31360.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
           cacao]
          Length = 761

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/54 (62%), Positives = 40/54 (74%)
 Frame = +2

Query: 5   KLVAVYKGMKECGPYPNASTYNMLLNGMVSLGRLKDGIFFAKEMCSGGFVPSFT 166
           +LV +Y GMK  GP PNAST+N LLNGM+ LG LKD IF  +EMC   FVPSF+
Sbjct: 102 ELVEMYIGMKSFGPQPNASTFNTLLNGMLRLGNLKDAIFTVEEMCRNHFVPSFS 155


>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +2

Query: 29  MKECGPYPNASTYNMLLNGMVSLGRLKDGIFFAKEMCSGGFVPSFT 166
           MK  GPYPNAST+N+LL+GM S G L+   FFA+EM   GF+PSFT
Sbjct: 1   MKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFT 46


>gb|EMJ26062.1| hypothetical protein PRUPE_ppa022809mg [Prunus persica]
          Length = 544

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +2

Query: 29  MKECGPYPNASTYNMLLNGMVSLGRLKDGIFFAKEMCSGGFVPSFT 166
           M+  GP PN+ST+N+LLNGM+SLG LKD    A++M  GGF+PSFT
Sbjct: 1   MERFGPTPNSSTFNVLLNGMLSLGHLKDAFVIAEKMVGGGFLPSFT 46


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