BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00023014
         (292 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW04113.1| hypothetical protein PHAVU_011G068200g [Phaseolus...    91   2e-16
ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis]      87   2e-15
gb|EMJ09951.1| hypothetical protein PRUPE_ppa015993mg [Prunus pe...    86   7e-15
gb|EMJ08380.1| hypothetical protein PRUPE_ppa017156mg [Prunus pe...    86   7e-15
ref|XP_002303899.2| pentatricopeptide repeat-containing family p...    85   1e-14
ref|XP_006424739.1| hypothetical protein CICLE_v10030177mg [Citr...    84   2e-14
ref|XP_004505902.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_004251315.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein...    75   9e-12
ref|NP_172253.1| pentatricopeptide repeat-containing protein [Ar...    75   1e-11
ref|XP_006363379.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11
ref|XP_006363378.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11
emb|CBI16200.3| unnamed protein product [Vitis vinifera]               73   4e-11
ref|XP_006417772.1| hypothetical protein EUTSA_v10009298mg [Eutr...    72   6e-11
ref|XP_002531100.1| pentatricopeptide repeat-containing protein,...    72   1e-10
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]    69   5e-10
ref|XP_002892416.1| pentatricopeptide repeat-containing protein ...    67   2e-09

>gb|ESW04113.1| hypothetical protein PHAVU_011G068200g [Phaseolus vulgaris]
          Length = 447

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 42/77 (54%), Positives = 58/77 (75%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L+VLN ML SRH+P+ ETF+CL VGL+KS N+D A F+LEEMEK  + F+L SWE+++  
Sbjct: 370 LSVLNAMLTSRHWPRSETFNCLVVGLLKSGNIDGACFVLEEMEKRKVEFDLGSWETIIKF 429

Query: 183 SCRDGTAVNELVTELIS 233
           +C +   V+EL+T L S
Sbjct: 430 ACSEDKGVSELLTVLTS 446


>ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Glycine max]
          Length = 449

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 40/77 (51%), Positives = 57/77 (74%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L+VLN ML SRH P+ ETF+C+ VGL+KS N+D + F+LEEMEK  + F+LESWE+++  
Sbjct: 370 LSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLEEMEKRKLEFDLESWETIIKS 429

Query: 183 SCRDGTAVNELVTELIS 233
           +C +    +EL+T L S
Sbjct: 430 ACSENKGASELMTVLTS 446


>ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Citrus sinensis]
          Length = 477

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/77 (57%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VLN ML SRH P+ ETFSCL VGL+K   +D A F+LEEMEK  MRF+L++WE LV +
Sbjct: 399 LKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTD 458

Query: 183 SCRDGTAVNELVTELIS 233
           +C        LV+ELIS
Sbjct: 459 ACIGDGNAGGLVSELIS 475


>gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis]
          Length = 461

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 42/77 (54%), Positives = 55/77 (71%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VLN ML SRH P+ E+F CL +GLVK  NL+ A F+LEEM K  M+F+LE W++LV E
Sbjct: 383 LKVLNAMLTSRHCPRLESFRCLIMGLVKCGNLEDACFVLEEMGKRKMQFDLEGWDALVVE 442

Query: 183 SCRDGTAVNELVTELIS 233
           +C   +  + LVTELI+
Sbjct: 443 ACGRNSGADGLVTELIT 459


>gb|EMJ09951.1| hypothetical protein PRUPE_ppa015993mg [Prunus persica]
          Length = 714

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 42/77 (54%), Positives = 52/77 (67%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VL  ML SRH P+ ETF CL  GLVK   +D A  +LEEMEK NM+F  E+WE+LV +
Sbjct: 389 LKVLIAMLTSRHCPRLETFECLVTGLVKCGKIDDAFVVLEEMEKRNMQFCFEAWEALVVD 448

Query: 183 SCRDGTAVNELVTELIS 233
           +C +     E+VTELIS
Sbjct: 449 ACGENVVAGEVVTELIS 465


>gb|EMJ08380.1| hypothetical protein PRUPE_ppa017156mg [Prunus persica]
          Length = 727

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 42/77 (54%), Positives = 52/77 (67%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VL  ML SRH P+ ETF CL  GLVK   +D A  +LEEMEK NM+F  E+WE+LV +
Sbjct: 402 LKVLIAMLTSRHCPRLETFECLVTGLVKCGKIDDACVVLEEMEKRNMQFCFEAWEALVVD 461

Query: 183 SCRDGTAVNELVTELIS 233
           +C +     E+VTELIS
Sbjct: 462 ACGENVVAGEVVTELIS 478


>ref|XP_002303899.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550343608|gb|EEE78878.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 463

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VLN ML S HFP+ ETF  L VGLVKS NLD A F+LEEMEK  M F  + WE+LV E
Sbjct: 381 LKVLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGACFVLEEMEKRQMMFCADDWEALVME 440

Query: 183 SCR--DGTAVNELVTELI 230
           SCR  +  +V E V EL+
Sbjct: 441 SCRGDENGSVGEHVNELV 458


>ref|XP_006424739.1| hypothetical protein CICLE_v10030177mg [Citrus clementina]
           gi|557526673|gb|ESR37979.1| hypothetical protein
           CICLE_v10030177mg [Citrus clementina]
          Length = 797

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VLN ML SRH P+ ETFSCL VGL+K   +D A F+LEEMEK  MRF+L++WE LV +
Sbjct: 397 LKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTD 456

Query: 183 SC-RDGTA 203
           +C  DG A
Sbjct: 457 ACIGDGNA 464


>ref|XP_004505902.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Cicer arietinum]
          Length = 452

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           LNVLN ML SRH P+ +TF+CL VGL+KS N+D   F+LEEMEK  + F+LESWE+++  
Sbjct: 372 LNVLNAMLASRHCPRSDTFNCLVVGLLKSGNVDGGCFVLEEMEKRKVDFDLESWETVIKF 431

Query: 183 SC-RDGTAVNELVTELISIA 239
           +C  D  A + L+  + S++
Sbjct: 432 ACSEDDKAASGLMNIITSLS 451


>ref|XP_004251315.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Solanum lycopersicum]
          Length = 473

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 36/76 (47%), Positives = 51/76 (67%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VLN ML SRHFP+ ET  CL +GL+    ++ A F+LEEMEK   +F  +SWE +V +
Sbjct: 397 LKVLNAMLMSRHFPRMETVRCLILGLLDKGKVEDACFVLEEMEKRKKKFNFDSWEVIVKD 456

Query: 183 SCRDGTAVNELVTELI 230
           SC    +V++L+ EL+
Sbjct: 457 SCTSDRSVSQLLDELV 472


>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Vitis vinifera]
          Length = 501

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 38/77 (49%), Positives = 50/77 (64%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VL+ ML   H P+ E+F  L VGL+K+  +D A F+LEEMEK  MRF LE+WE+LV +
Sbjct: 422 LKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKD 481

Query: 183 SCRDGTAVNELVTELIS 233
           +C        LV EL+S
Sbjct: 482 ACPGDRGAGGLVRELVS 498


>gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 951

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 40/80 (50%), Positives = 52/80 (65%)
 Frame = +3

Query: 3    LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
            L VLNVM  S H P+ ET   L  GL+K   +D A F+LEEMEK  M F+LE+W +LV +
Sbjct: 872  LKVLNVMFTSGHCPRLETLCQLVTGLLKCGKIDGACFVLEEMEKRKMSFDLEAWGALVRD 931

Query: 183  SCRDGTAVNELVTELISIAS 242
            +C  G   N+L T+LI +AS
Sbjct: 932  AC-GGDDTNDLQTQLILVAS 950


>ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g07740, mitochondrial; Flags: Precursor
           gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR
           repeats PF|01535 [Arabidopsis thaliana]
           gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis
           thaliana] gi|31376389|gb|AAP49521.1| At1g07730
           [Arabidopsis thaliana] gi|51970836|dbj|BAD44110.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332190050|gb|AEE28171.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 459

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           LNVLN ML SRH P   TF C+  GL+K  NLD A F+LE M K N+ F   +W++L+++
Sbjct: 381 LNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSD 440

Query: 183 SC-RDGTAVNELVTELISI 236
            C +DG    E ++E+ISI
Sbjct: 441 LCIKDGGVYCEALSEVISI 459


>ref|XP_006363379.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 492

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/62 (51%), Positives = 43/62 (69%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VLN ML SRHFP+ ET  CL +GL+    ++ A F+LEEMEK   +F  +SWE++V +
Sbjct: 394 LKVLNAMLMSRHFPRMETVRCLILGLLDKGKVEDACFVLEEMEKRKKKFNFDSWEAIVKD 453

Query: 183 SC 188
           SC
Sbjct: 454 SC 455


>ref|XP_006363378.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 506

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/62 (51%), Positives = 43/62 (69%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VLN ML SRHFP+ ET  CL +GL+    ++ A F+LEEMEK   +F  +SWE++V +
Sbjct: 394 LKVLNAMLMSRHFPRMETVRCLILGLLDKGKVEDACFVLEEMEKRKKKFNFDSWEAIVKD 453

Query: 183 SC 188
           SC
Sbjct: 454 SC 455


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 37/75 (49%), Positives = 48/75 (64%)
 Frame = +3

Query: 3    LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
            L VL+ ML   H P+ E+F  L VGL+K+  +D A F+LEEMEK  MRF LE+WE+LV +
Sbjct: 784  LKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKD 843

Query: 183  SCRDGTAVNELVTEL 227
            +C        LV EL
Sbjct: 844  ACPGDRGAGGLVREL 858


>ref|XP_006417772.1| hypothetical protein EUTSA_v10009298mg [Eutrema salsugineum]
           gi|557095543|gb|ESQ36125.1| hypothetical protein
           EUTSA_v10009298mg [Eutrema salsugineum]
          Length = 460

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           LNVLN ML SRH P   TF C+  GL+K  NLD A F+LE M K N+ F   +W++L+ +
Sbjct: 382 LNVLNAMLASRHSPTPATFVCMVSGLIKGDNLDHACFVLEVMGKKNLSFGSGAWQNLLCD 441

Query: 183 SC-RDGTAVNELVTELIS 233
            C +DG A  + ++E+IS
Sbjct: 442 LCIKDGGACCDALSEVIS 459


>ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529296|gb|EEF31265.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/64 (53%), Positives = 44/64 (68%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VLN ML SRH P+ ETF+C  VGL+KS ++D A F+LEEMEK  M  + + WE+LV  
Sbjct: 380 LKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKRKMALDSDGWEALVRC 439

Query: 183 SCRD 194
            C +
Sbjct: 440 CCSE 443


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/62 (53%), Positives = 44/62 (70%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           L VL+ ML   H P+ E+F  L VGL+K+  +D A F+LEEMEK  MRF LE+WE+LV +
Sbjct: 713 LKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKD 772

Query: 183 SC 188
           +C
Sbjct: 773 AC 774


>ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338258|gb|EFH68675.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   LNVLNVMLKSRHFPQKETFSCLFVGLVKSSNLDSARFILEEMEKINMRFELESWESLVAE 182
           LNVLN ML SRH P   TF  +  GL+K  NLD A F+LE M K  + F   +W++L+ +
Sbjct: 381 LNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACFVLEVMGKKKLSFGYSAWQNLLCD 440

Query: 183 SC-RDGTAVNELVTELIS 233
            C +DG A  E ++E IS
Sbjct: 441 LCIKDGGAYCEALSEAIS 458