BLASTX nr result
ID: Catharanthus23_contig00022728
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00022728
(510 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004513404.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 139 6e-35
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 140 3e-34
ref|XP_004244401.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 139 4e-34
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 140 4e-34
gb|EXC36384.1| Pre-mRNA-splicing factor CWC22-like protein [Moru... 140 5e-34
emb|CBI38093.3| unnamed protein product [Vitis vinifera] 140 7e-34
gb|EMJ09291.1| hypothetical protein PRUPE_ppa001342mg [Prunus pe... 140 7e-34
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 140 7e-34
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 135 1e-33
gb|ESW18300.1| hypothetical protein PHAVU_006G029300g [Phaseolus... 138 1e-33
ref|NP_178208.1| MIF4G and MA3 domain-containing protein [Arabi... 138 2e-33
ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 138 2e-33
ref|XP_002887803.1| hypothetical protein ARALYDRAFT_895889 [Arab... 138 2e-33
ref|XP_004295206.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 136 4e-33
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 135 4e-33
ref|XP_004236472.1| PREDICTED: pre-mRNA-splicing factor CWC22-li... 134 4e-33
ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 138 6e-33
ref|XP_006300681.1| hypothetical protein CARUB_v10019722mg, part... 138 9e-33
ref|XP_006364611.1| PREDICTED: pre-mRNA-splicing factor cwc22-li... 131 9e-33
gb|ESW25473.1| hypothetical protein PHAVU_003G039000g [Phaseolus... 134 2e-32
>ref|XP_004513404.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cicer arietinum]
Length = 803
Score = 139 bits (351), Expect(2) = 6e-35
Identities = 67/113 (59%), Positives = 87/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL T AL W++L+ IRL EE+ SSS+IFIKIL
Sbjct: 625 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTFALPWHVLSYIRLTEEDTTSSSRIFIKIL 684
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++LN+ +++DS IFPKD+ +N +FCINFFT IG G+
Sbjct: 685 FQELSEHLGIRLLNERLNDPTMQDSFESIFPKDNPKNTRFCINFFTSIGLGGL 737
Score = 33.5 bits (75), Expect(2) = 6e-35
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG LT+NLR+YLK M Q++ + DSD D
Sbjct: 734 LGGLTENLREYLKNMPRLIMQQQKQVSDSDSD 765
>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
Length = 860
Score = 140 bits (353), Expect(2) = 3e-34
Identities = 67/113 (59%), Positives = 88/113 (77%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W++L+ IRL EE+ SSS+IFIKIL
Sbjct: 678 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKIL 737
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++LN+ ++++S IFPKD+ +N +FCINFFT IG G+
Sbjct: 738 FQELSEHLGIRLLNERLNDLTMQESFESIFPKDNPKNTRFCINFFTSIGLGGL 790
Score = 30.4 bits (67), Expect(2) = 3e-34
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG LT+NLR+YLK M Q++ + +S+ D
Sbjct: 787 LGGLTENLREYLKNMPRLIMQQQKQVSESESD 818
>ref|XP_004244401.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
lycopersicum]
Length = 920
Score = 139 bits (351), Expect(2) = 4e-34
Identities = 68/113 (60%), Positives = 87/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W+ LA IRL EE+ SSS+IFIKIL
Sbjct: 743 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHALAYIRLTEEDTTSSSRIFIKIL 802
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQE+ + LGI LL ++LN+ +++DS+ IFPKD+ +N +F INFFT IG GI
Sbjct: 803 FQEMSEHLGIRLLNERLNDPTMQDSLDSIFPKDNPKNTRFAINFFTSIGLGGI 855
Score = 30.8 bits (68), Expect(2) = 4e-34
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG +T+NLRDYLK M Q++ +SD++
Sbjct: 852 LGGITENLRDYLKNMPRLIMQQQKPISESDDE 883
>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X1 [Glycine
max] gi|571473788|ref|XP_006586031.1| PREDICTED:
pre-mRNA-splicing factor CWC22 homolog isoform X2
[Glycine max]
Length = 871
Score = 140 bits (352), Expect(2) = 4e-34
Identities = 66/113 (58%), Positives = 87/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NV KFF HLL TDAL W++L+ IRL EE+ SSS+IFIKIL
Sbjct: 695 KCFVQQYSMIHRLETNKLRNVGKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKIL 754
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++LN+ ++++S IFPKD+ +N +FCINFFT IG G+
Sbjct: 755 FQELSEHLGIRLLNERLNDPTMQESFESIFPKDNPKNTRFCINFFTSIGLGGL 807
Score = 30.4 bits (67), Expect(2) = 4e-34
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG LT+NLR+YLK M Q++ + +S+ D
Sbjct: 804 LGGLTENLREYLKNMPRLIMQQQKQVSESESD 835
>gb|EXC36384.1| Pre-mRNA-splicing factor CWC22-like protein [Morus notabilis]
Length = 850
Score = 140 bits (353), Expect(2) = 5e-34
Identities = 69/113 (61%), Positives = 86/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W+ LA IRL EE+ SSS+IFIKIL
Sbjct: 669 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHCLAYIRLTEEDTTSSSRIFIKIL 728
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LG+ LL ++LN+ S++DS IFPKD+ +N +F INFFT IG GI
Sbjct: 729 FQELSEHLGLRLLNERLNDPSMQDSFESIFPKDNPKNTRFAINFFTSIGLGGI 781
Score = 29.6 bits (65), Expect(2) = 5e-34
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG +T+NLR+YLK M + Q++ +S+ D
Sbjct: 778 LGGITENLREYLKNMPNLIMQQQKHVSESESD 809
>emb|CBI38093.3| unnamed protein product [Vitis vinifera]
Length = 2607
Score = 140 bits (352), Expect(2) = 7e-34
Identities = 69/113 (61%), Positives = 86/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W++LA IRL EE+ SSS+IFIKIL
Sbjct: 2427 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKIL 2486
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++L + S++DS IFPKD+ +N +F INFFT IG GI
Sbjct: 2487 FQELSEHLGIRLLNERLTDPSMQDSFESIFPKDNPKNTRFSINFFTSIGLGGI 2539
Score = 29.6 bits (65), Expect(2) = 7e-34
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG +T+NLR+YLK M Q++ +SD++
Sbjct: 2536 LGGITENLREYLKNMPRLIMQQQKPVSESDDE 2567
>gb|EMJ09291.1| hypothetical protein PRUPE_ppa001342mg [Prunus persica]
Length = 849
Score = 140 bits (352), Expect(2) = 7e-34
Identities = 69/113 (61%), Positives = 86/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W++LA IRL EE+ SSS+IFIKIL
Sbjct: 661 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKIL 720
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++L + S++DS IFPKD+ +N +F INFFT IG GI
Sbjct: 721 FQELSEHLGIRLLNERLTDPSMQDSYDSIFPKDNPKNTRFAINFFTSIGLGGI 773
Score = 29.6 bits (65), Expect(2) = 7e-34
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDEDRLG 437
LG +T+NLR+YLK M Q++ DS+ + G
Sbjct: 770 LGGITENLREYLKHMPRLIMQQQKAVSDSESESSG 804
>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
Length = 785
Score = 140 bits (352), Expect(2) = 7e-34
Identities = 69/113 (61%), Positives = 86/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W++LA IRL EE+ SSS+IFIKIL
Sbjct: 605 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKIL 664
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++L + S++DS IFPKD+ +N +F INFFT IG GI
Sbjct: 665 FQELSEHLGIRLLNERLTDPSMQDSFESIFPKDNPKNTRFSINFFTSIGLGGI 717
Score = 29.6 bits (65), Expect(2) = 7e-34
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG +T+NLR+YLK M Q++ +SD++
Sbjct: 714 LGGITENLREYLKNMPRLIMQQQKPVSESDDE 745
>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
Length = 797
Score = 135 bits (341), Expect(2) = 1e-33
Identities = 65/113 (57%), Positives = 86/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W++L+ IRL EE+ SSS+IFIKIL
Sbjct: 618 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKIL 677
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++L + +++DS IFP+D+ +N +F INFFT IG G+
Sbjct: 678 FQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGL 730
Score = 33.1 bits (74), Expect(2) = 1e-33
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG LT+NLR+YLK M Q++ DSDE+
Sbjct: 727 LGGLTENLREYLKNMPRLIMQQQKPVSDSDEE 758
>gb|ESW18300.1| hypothetical protein PHAVU_006G029300g [Phaseolus vulgaris]
Length = 866
Score = 138 bits (347), Expect(2) = 1e-33
Identities = 66/113 (58%), Positives = 87/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL T AL W++L+ IRL EE+ SSS+IFIKIL
Sbjct: 686 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTFALPWHVLSYIRLTEEDTTSSSRIFIKIL 745
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++LN+ ++++S IFPKD+ +N +FCINFFT IG G+
Sbjct: 746 FQELSEHLGIRLLNERLNDPTMQESFESIFPKDNPKNTRFCINFFTSIGLGGL 798
Score = 30.4 bits (67), Expect(2) = 1e-33
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG LT+NLR+YLK M Q++ + +S+ D
Sbjct: 795 LGGLTENLREYLKNMPRLIMQQQKQVSESESD 826
>ref|NP_178208.1| MIF4G and MA3 domain-containing protein [Arabidopsis thaliana]
gi|6503305|gb|AAF14681.1|AC011713_29 Contains similarity
to gb|U19615 LET 858 gene from Caenorhabditis elegans.
ESTs gb|AI995150, gb|H76674 and gb|R84035 come from this
gene [Arabidopsis thaliana] gi|22654971|gb|AAM98078.1|
At1g80930/F23A5_23 [Arabidopsis thaliana]
gi|28416525|gb|AAO42793.1| At1g80930/F23A5_23
[Arabidopsis thaliana] gi|332198347|gb|AEE36468.1| MIF4G
and MA3 domain-containing protein [Arabidopsis thaliana]
Length = 900
Score = 138 bits (348), Expect(2) = 2e-33
Identities = 67/113 (59%), Positives = 87/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W++LA IRL EE+ SSS+IFIKIL
Sbjct: 722 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKIL 781
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++L + ++++S+ IFPKD+ +N +F INFFT IG GI
Sbjct: 782 FQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGI 834
Score = 29.6 bits (65), Expect(2) = 2e-33
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSD 422
LG +T+NLR+YLK M S Q++ + +S+
Sbjct: 831 LGGITENLREYLKNMPSLIMQRQKQVAESE 860
>ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
lycopersicum]
Length = 860
Score = 138 bits (348), Expect(2) = 2e-33
Identities = 67/113 (59%), Positives = 87/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W+ LA IRL EE+ SSS+IFIKIL
Sbjct: 685 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHCLAYIRLTEEDTTSSSRIFIKIL 744
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQE+ + LGI LL ++LN+ ++++S+ IFPKD+ +N +F INFFT IG GI
Sbjct: 745 FQEMSEHLGIRLLNERLNDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGI 797
Score = 29.6 bits (65), Expect(2) = 2e-33
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDE 425
LG +T++LR+YLK M Q++ DSDE
Sbjct: 794 LGGITESLREYLKNMPRLIMQQQKPVSDSDE 824
>ref|XP_002887803.1| hypothetical protein ARALYDRAFT_895889 [Arabidopsis lyrata subsp.
lyrata] gi|297333644|gb|EFH64062.1| hypothetical protein
ARALYDRAFT_895889 [Arabidopsis lyrata subsp. lyrata]
Length = 897
Score = 138 bits (348), Expect(2) = 2e-33
Identities = 67/113 (59%), Positives = 87/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W++LA IRL EE+ SSS+IFIKIL
Sbjct: 719 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKIL 778
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++L + ++++S+ IFPKD+ +N +F INFFT IG GI
Sbjct: 779 FQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGI 831
Score = 29.3 bits (64), Expect(2) = 2e-33
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSD 422
LG +T+NLR+YLK M S Q++ + +S+
Sbjct: 828 LGGITENLREYLKNMPSLIMQQQKQVAESE 857
>ref|XP_004295206.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Fragaria vesca
subsp. vesca]
Length = 838
Score = 136 bits (343), Expect(2) = 4e-33
Identities = 67/113 (59%), Positives = 85/113 (75%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W+ LA IRL EE+ SSS+IFIKIL
Sbjct: 654 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHCLAYIRLTEEDTTSSSRIFIKIL 713
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++L + +++DS IFP+D+ +N +F INFFT IG GI
Sbjct: 714 FQELSEHLGIRLLNERLTDPAMQDSYESIFPRDNPKNTRFAINFFTSIGLGGI 766
Score = 30.4 bits (67), Expect(2) = 4e-33
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDEDRLG 437
LG +T+NLR+YLK M Q++ A D + D G
Sbjct: 763 LGGITENLREYLKHMPRLIMQQQRAASDVESDSSG 797
>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
homolog, partial [Cucumis sativus]
Length = 780
Score = 135 bits (341), Expect(2) = 4e-33
Identities = 65/113 (57%), Positives = 86/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W++L+ IRL EE+ SSS+IFIKIL
Sbjct: 618 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKIL 677
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++L + +++DS IFP+D+ +N +F INFFT IG G+
Sbjct: 678 FQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGL 730
Score = 31.2 bits (69), Expect(2) = 4e-33
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG LT+NLR+Y K M Q++ DSDE+
Sbjct: 727 LGGLTENLREYXKNMPRLIMQQQKPVSDSDEE 758
>ref|XP_004236472.1| PREDICTED: pre-mRNA-splicing factor CWC22-like [Solanum
lycopersicum]
Length = 517
Score = 134 bits (336), Expect(2) = 4e-33
Identities = 66/111 (59%), Positives = 84/111 (75%)
Frame = +1
Query: 10 FATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKILFQ 189
F YS IHRLET +++NVAKFF HLL TDAL W++LA +RL EE+ SSS+IFIKILFQ
Sbjct: 367 FVQQYSRIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYLRLTEEDTTSSSRIFIKILFQ 426
Query: 190 ELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
EL + LGI+ L +L+E S++++ IFPKDS +N +F INFFT IG GI
Sbjct: 427 ELSEHLGINKLNDRLSEPSMQEAFESIFPKDSLKNTRFAINFFTSIGLGGI 477
Score = 33.1 bits (74), Expect(2) = 4e-33
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAF---DSDEDRLGKRRK 449
LG +T+NLRDYLK M Q+ +AF SD+ KRR+
Sbjct: 474 LGGITENLRDYLKNMPRLILQQDKRAFRSSQSDDVHQSKRRR 515
>ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum tuberosum]
Length = 951
Score = 138 bits (348), Expect(2) = 6e-33
Identities = 67/113 (59%), Positives = 87/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W+ LA IRL EE+ SSS+IFIKIL
Sbjct: 776 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHCLAYIRLTEEDTTSSSRIFIKIL 835
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQE+ + LGI LL ++LN+ ++++S+ IFPKD+ +N +F INFFT IG GI
Sbjct: 836 FQEMSEHLGIRLLNERLNDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGI 888
Score = 28.1 bits (61), Expect(2) = 6e-33
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDE 425
LG +T++LR+YLK M Q++ +SDE
Sbjct: 885 LGGITESLREYLKNMPRLIMQQQKPVSESDE 915
>ref|XP_006300681.1| hypothetical protein CARUB_v10019722mg, partial [Capsella rubella]
gi|482569391|gb|EOA33579.1| hypothetical protein
CARUB_v10019722mg, partial [Capsella rubella]
Length = 980
Score = 138 bits (348), Expect(2) = 9e-33
Identities = 67/113 (59%), Positives = 87/113 (76%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL TDAL W++LA IRL EE+ SSS+IFIKIL
Sbjct: 802 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKIL 861
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI LL ++L + ++++S+ IFPKD+ +N +F INFFT IG GI
Sbjct: 862 FQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGI 914
Score = 27.3 bits (59), Expect(2) = 9e-33
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSD 422
LG +T+NLR+YLK M Q++ + +S+
Sbjct: 911 LGGITENLREYLKNMPRLIMQQQKQVAESE 940
>ref|XP_006364611.1| PREDICTED: pre-mRNA-splicing factor cwc22-like [Solanum tuberosum]
Length = 513
Score = 131 bits (330), Expect(2) = 9e-33
Identities = 65/111 (58%), Positives = 83/111 (74%)
Frame = +1
Query: 10 FATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKILFQ 189
F YS IHRLET +++NVAKFF HLL TDAL W++LA +RL EE+ SSS+IFIKILFQ
Sbjct: 366 FVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYLRLTEEDTTSSSRIFIKILFQ 425
Query: 190 ELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
EL +LGI+ L +L++ S+++S IFPKDS +N +F INFF IG GI
Sbjct: 426 ELSGQLGINTLNDRLSDPSMQESFESIFPKDSPKNTRFAINFFISIGLGGI 476
Score = 34.3 bits (77), Expect(2) = 9e-33
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDEDRLGKRRK 449
LG +T+NLR+YLK M Q ++ ++ +SD+ KRR+
Sbjct: 473 LGGITENLRNYLKNMPRQQDKRVFRSSESDDVHQSKRRR 511
>gb|ESW25473.1| hypothetical protein PHAVU_003G039000g [Phaseolus vulgaris]
Length = 629
Score = 134 bits (336), Expect(2) = 2e-32
Identities = 64/113 (56%), Positives = 85/113 (75%)
Frame = +1
Query: 4 QCFATNYSGIHRLETYRIQNVAKFFGHLLSTDALNWNILACIRLHEEERNSSSQIFIKIL 183
+CF YS IHRLET +++NVAKFF HLL T AL W++L+ IRL EE+ SSS+IFIKIL
Sbjct: 448 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTCALPWHVLSYIRLTEEDTTSSSRIFIKIL 507
Query: 184 FQELCDELGIDLLGKKLNEDSVRDSVAGIFPKDSKRNIQFCINFFTCIGFWGI 342
FQEL + LGI L ++LN+ ++++ IFPKD+ +N +FCINFFT IG G+
Sbjct: 508 FQELSEHLGIQPLNERLNDPTMQEYFESIFPKDNPKNTRFCINFFTSIGLGGL 560
Score = 31.2 bits (69), Expect(2) = 2e-32
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 333 LGHLTKNLRDYLKKMVSQAKQKRGKAFDSDED 428
LG LT+NLR+YLK M Q++ + DS+ D
Sbjct: 557 LGGLTENLREYLKNMPHFIMQQQKQGSDSETD 588