BLASTX nr result

ID: Catharanthus23_contig00021897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00021897
         (273 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB62508.1| Putative F-box protein [Morus notabilis]                45   8e-07

>gb|EXB62508.1| Putative F-box protein [Morus notabilis]
          Length = 389

 Score = 45.1 bits (105), Expect(2) = 8e-07
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
 Frame = +1

Query: 1   YKIINSRSFIDSHLQRSETVITFREHARKDLD-------------AFSVQSKLFPFQSVL 141
           Y +INS  FID HL+RSETV+ F    +K L              A SV++KL+   S +
Sbjct: 45  YNLINSTKFIDDHLRRSETVLLFLSSIQKKLSDSRMVSILPENPKAVSVEAKLYHANSAI 104

Query: 142 SLPRPILDQSSLCDIKLMK 198
              + ++D++S   I+ ++
Sbjct: 105 VFDKLLVDRASKFSIQFLE 123



 Score = 33.5 bits (75), Expect(2) = 8e-07
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 195 EMTRGKIKIEEYKTTCMGKIRASCYG 272
           E+  GK +I EY  +C+G IRA+C G
Sbjct: 123 ELKNGKCQIGEYNISCLGNIRATCNG 148


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