BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00021889
         (280 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40586.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s...    83   4e-14
ref|XP_004239689.1| PREDICTED: DNA-directed RNA polymerase III s...    79   6e-13
ref|XP_006345812.1| PREDICTED: DNA-directed RNA polymerase III s...    77   2e-12
gb|EOX95647.1| DNA-directed RNA polymerase subunit [Theobroma ca...    77   2e-12
ref|XP_006444795.1| hypothetical protein CICLE_v10022957mg [Citr...    77   3e-12
ref|XP_006491318.1| PREDICTED: DNA-directed RNA polymerase III s...    74   2e-11
ref|XP_004239690.1| PREDICTED: DNA-directed RNA polymerase III s...    72   1e-10
ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycin...    71   1e-10
ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III s...    70   2e-10
ref|XP_002523512.1| DNA-directed RNA polymerase III, putative [R...    70   4e-10
gb|ESW12299.1| hypothetical protein PHAVU_008G101000g [Phaseolus...    69   6e-10
gb|EXB83864.1| DNA-directed RNA polymerase subunit M [Morus nota...    69   8e-10
ref|XP_002318427.1| hypothetical protein POPTR_0012s02290g [Popu...    67   2e-09
ref|XP_004158339.1| PREDICTED: DNA-directed RNA polymerase III s...    66   5e-09
ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III s...    66   5e-09
gb|ADE76569.1| unknown [Picea sitchensis]                              63   4e-08
ref|XP_004306642.1| PREDICTED: DNA-directed RNA polymerase III s...    60   4e-07
gb|AFK43219.1| unknown [Lotus japonicus]                               58   1e-06
ref|XP_001766341.1| predicted protein [Physcomitrella patens] gi...    57   3e-06

>emb|CBI40586.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 35/42 (83%), Positives = 35/42 (83%)
 Frame = +3

Query: 153 RSAAMEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           R   MEFCPTCG  LQYELPHM RPARFFCPTCPYVC IETK
Sbjct: 61  RLQQMEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETK 102


>ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Vitis vinifera]
          Length = 111

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 34/38 (89%), Positives = 34/38 (89%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG  LQYELPHM RPARFFCPTCPYVC IETK
Sbjct: 1   MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETK 38


>ref|XP_004239689.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           isoform 1 [Solanum lycopersicum]
          Length = 111

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           ME CP CGMLLQYELPHMDRPARFFCP CPYVC +E +
Sbjct: 1   MEVCPDCGMLLQYELPHMDRPARFFCPACPYVCNLENR 38


>ref|XP_006345812.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Solanum tuberosum]
          Length = 111

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           ME CP CGMLLQYELPHMDRPARFFCP CP+VC +E +
Sbjct: 1   MEVCPDCGMLLQYELPHMDRPARFFCPACPFVCNLENR 38


>gb|EOX95647.1| DNA-directed RNA polymerase subunit [Theobroma cacao]
          Length = 112

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG +LQ+ELPHM RP+RF CPTCPYVCQ+E K
Sbjct: 1   MEFCPTCGNMLQFELPHMGRPSRFVCPTCPYVCQLENK 38


>ref|XP_006444795.1| hypothetical protein CICLE_v10022957mg [Citrus clementina]
           gi|557547057|gb|ESR58035.1| hypothetical protein
           CICLE_v10022957mg [Citrus clementina]
          Length = 110

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG +LQYELPHMDRP+RF CP CPYVC +E++
Sbjct: 1   MEFCPTCGTMLQYELPHMDRPSRFSCPACPYVCNMESR 38


>ref|XP_006491318.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           isoform X1 [Citrus sinensis]
           gi|568876506|ref|XP_006491319.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC10-like isoform X2 [Citrus
           sinensis] gi|568876508|ref|XP_006491320.1| PREDICTED:
           DNA-directed RNA polymerase III subunit RPC10-like
           isoform X3 [Citrus sinensis]
          Length = 110

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG +LQYELPHMD P+RF CP CPYVC +E++
Sbjct: 1   MEFCPTCGTMLQYELPHMDSPSRFSCPACPYVCNMESR 38


>ref|XP_004239690.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           isoform 2 [Solanum lycopersicum]
          Length = 104

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYV 260
           ME CP CGMLLQYELPHMDRPARFFCP CPY+
Sbjct: 1   MEVCPDCGMLLQYELPHMDRPARFFCPACPYI 32


>ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycine max]
           gi|255631470|gb|ACU16102.1| unknown [Glycine max]
          Length = 111

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG +LQYELP+M RP+RFFC  CPYVC IE +
Sbjct: 1   MEFCPTCGNMLQYELPYMGRPSRFFCSACPYVCLIENR 38


>ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           isoform X1 [Glycine max]
           gi|571546939|ref|XP_006602584.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC10-like isoform X2
           [Glycine max]
          Length = 111

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCP+CG +LQYELP+M RP+RFFC  CPYVC IE +
Sbjct: 1   MEFCPSCGNMLQYELPYMGRPSRFFCSACPYVCHIENR 38


>ref|XP_002523512.1| DNA-directed RNA polymerase III, putative [Ricinus communis]
           gi|223537219|gb|EEF38851.1| DNA-directed RNA polymerase
           III, putative [Ricinus communis]
          Length = 112

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG+LL+YELP+M + ARF+C TCPYVC IE++
Sbjct: 1   MEFCPTCGVLLRYELPNMGQSARFYCSTCPYVCSIESR 38


>gb|ESW12299.1| hypothetical protein PHAVU_008G101000g [Phaseolus vulgaris]
          Length = 111

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG +L YELP++DRPARFFC  CPYVC I  +
Sbjct: 1   MEFCPTCGNMLLYELPYLDRPARFFCFACPYVCNIHNR 38


>gb|EXB83864.1| DNA-directed RNA polymerase subunit M [Morus notabilis]
          Length = 110

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG++L YELP   R ARF+CPTCPYVC +E++
Sbjct: 1   MEFCPTCGVMLLYELPDRGRSARFYCPTCPYVCSLESR 38


>ref|XP_002318427.1| hypothetical protein POPTR_0012s02290g [Populus trichocarpa]
           gi|566196382|ref|XP_006376652.1| DNA-directed RNA
           polymerase 3 family protein [Populus trichocarpa]
           gi|566196384|ref|XP_006376653.1| hypothetical protein
           POPTR_0012s02290g [Populus trichocarpa]
           gi|222859100|gb|EEE96647.1| hypothetical protein
           POPTR_0012s02290g [Populus trichocarpa]
           gi|550326208|gb|ERP54449.1| DNA-directed RNA polymerase
           3 family protein [Populus trichocarpa]
           gi|550326209|gb|ERP54450.1| hypothetical protein
           POPTR_0012s02290g [Populus trichocarpa]
          Length = 112

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCGMLL+YE P+M + ARF+CPTCPY   IE++
Sbjct: 1   MEFCPTCGMLLRYETPNMGQAARFYCPTCPYFASIESR 38


>ref|XP_004158339.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Cucumis sativus]
          Length = 112

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG +LQ+ELP+M + +RFFCPTCPYV  +E +
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENR 38


>ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Cucumis sativus]
          Length = 111

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG +LQ+ELP+M + +RFFCPTCPYV  +E +
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENR 38


>gb|ADE76569.1| unknown [Picea sitchensis]
          Length = 110

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           MEFCPTCG LLQ E P+M +  RFFCPTCPYV  IE K
Sbjct: 1   MEFCPTCGNLLQIEHPYMSQSLRFFCPTCPYVFPIERK 38


>ref|XP_004306642.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Fragaria vesca subsp. vesca]
          Length = 111

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           M+FCP CG +LQYELP+M   ARFFCPTCPYV  +E +
Sbjct: 1   MDFCPDCGGMLQYELPNM-HAARFFCPTCPYVAYMENR 37


>gb|AFK43219.1| unknown [Lotus japonicus]
          Length = 111

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIE 272
           MEFCP+C  +L++ELP+M   +R FC TCPYVC IE
Sbjct: 1   MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIE 36


>ref|XP_001766341.1| predicted protein [Physcomitrella patens]
           gi|162682555|gb|EDQ68973.1| predicted protein
           [Physcomitrella patens]
          Length = 110

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +3

Query: 165 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCQIETK 278
           M+FCPTC  LL  E P M RP R+FCPTCPYV  ++ K
Sbjct: 1   MDFCPTCANLLLVENPSMGRPLRYFCPTCPYVYVVDRK 38