BLASTX nr result
ID: Catharanthus23_contig00021745
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00021745
(507 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002331487.1| predicted protein [Populus trichocarpa] 113 2e-23
gb|EMJ25612.1| hypothetical protein PRUPE_ppa021206mg [Prunus pe... 105 5e-21
ref|XP_002517091.1| pentatricopeptide repeat-containing protein,... 105 5e-21
ref|XP_004493626.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago t... 100 3e-19
ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
gb|ESW34360.1| hypothetical protein PHAVU_001G146000g [Phaseolus... 96 5e-18
gb|EXC34666.1| hypothetical protein L484_020434 [Morus notabilis] 89 5e-16
ref|XP_006361254.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_006842814.1| hypothetical protein AMTR_s00081p00056740 [A... 82 6e-14
emb|CBI15973.3| unnamed protein product [Vitis vinifera] 80 2e-13
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 80 2e-13
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, p... 79 5e-13
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe... 77 2e-12
gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus pe... 77 2e-12
gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily p... 76 4e-12
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-12
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis... 75 7e-12
>ref|XP_002331487.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 113 bits (283), Expect = 2e-23
Identities = 53/76 (69%), Positives = 64/76 (84%)
Frame = -1
Query: 228 IITHPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLLF 49
IITHP LL +ESC SM QLKQIQAHMT+T LI H FP+SR+L+F AL +GDIN+A+LLF
Sbjct: 48 IITHPILLAMESCTSMLQLKQIQAHMTKTALISHTFPVSRVLAFCALSDSGDINHAHLLF 107
Query: 48 SQIADPNIYIWNTMMR 1
SQ+ +PN YIWNTM+R
Sbjct: 108 SQLQNPNTYIWNTMIR 123
>gb|EMJ25612.1| hypothetical protein PRUPE_ppa021206mg [Prunus persica]
Length = 597
Score = 105 bits (263), Expect = 5e-21
Identities = 50/77 (64%), Positives = 63/77 (81%)
Frame = -1
Query: 231 LIITHPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLL 52
+IIT+PTLL++ESC +M +LKQIQA MT TGLI H FP+SR+L+F AL GDI YA+LL
Sbjct: 14 VIITNPTLLIMESCTTMLELKQIQAQMTCTGLITHTFPLSRILAFCALADGGDIQYAHLL 73
Query: 51 FSQIADPNIYIWNTMMR 1
F+QI PN Y+WNTM+R
Sbjct: 74 FTQIEKPNTYMWNTMIR 90
>ref|XP_002517091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543726|gb|EEF45254.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 606
Score = 105 bits (263), Expect = 5e-21
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = -1
Query: 231 LIITHPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLL 52
+I+THP LL++ESC M QLKQIQAHM TGLI H FP+SR+L+F AL GDI +A+LL
Sbjct: 155 VIVTHPVLLIMESCTCMIQLKQIQAHMIITGLITHTFPVSRVLAFCALADTGDIRHAHLL 214
Query: 51 FSQIADPNIYIWNTMMR 1
F+QI PN YIWNTM+R
Sbjct: 215 FNQIEYPNTYIWNTMIR 231
>ref|XP_004493626.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cicer arietinum]
Length = 666
Score = 100 bits (248), Expect = 3e-19
Identities = 44/77 (57%), Positives = 64/77 (83%)
Frame = -1
Query: 231 LIITHPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLL 52
+IIT+PTL+++ESC +M QL+QIQA MT TGLI H FP+SR+++F AL +GDI+YA++L
Sbjct: 44 VIITNPTLVVMESCSTMRQLRQIQARMTVTGLITHAFPVSRVIAFCALADSGDIHYAHIL 103
Query: 51 FSQIADPNIYIWNTMMR 1
F + +PN ++WNTM+R
Sbjct: 104 FDRFQEPNTFMWNTMIR 120
>ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 1024
Score = 100 bits (248), Expect = 3e-19
Identities = 43/77 (55%), Positives = 64/77 (83%)
Frame = -1
Query: 231 LIITHPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLL 52
+IIT+PTLL++ESC +M QLKQIQA MT TG+I H FP+SR+++F AL +GD++YA+ +
Sbjct: 154 VIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTI 213
Query: 51 FSQIADPNIYIWNTMMR 1
F+++ PN ++WNTM+R
Sbjct: 214 FNRVEQPNTFMWNTMIR 230
>ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/77 (58%), Positives = 61/77 (79%)
Frame = -1
Query: 231 LIITHPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLL 52
+ I++PTLL+++SC SM QLKQIQAH+T TGL+ IFP SRLL+F AL +GDI+YA+L+
Sbjct: 49 VFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLI 108
Query: 51 FSQIADPNIYIWNTMMR 1
F Q PN + WNTM++
Sbjct: 109 FDQTELPNCFFWNTMIK 125
>gb|ESW34360.1| hypothetical protein PHAVU_001G146000g [Phaseolus vulgaris]
Length = 670
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -1
Query: 231 LIITHPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPN-GDINYANL 55
+IITHPTL+++ESC SM QL+QIQA MT TGLI H FP+SR+L+F AL + GDI YA+
Sbjct: 43 VIITHPTLVVMESCSSMFQLRQIQARMTLTGLITHTFPLSRILAFCALAADAGDICYAHR 102
Query: 54 LFSQIADPNIYIWNTMMR 1
LF +I PN ++WNT++R
Sbjct: 103 LFCRIPQPNTFMWNTIIR 120
>gb|EXC34666.1| hypothetical protein L484_020434 [Morus notabilis]
Length = 603
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = -1
Query: 183 MAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLLFSQIADPNIYIWNTMM 4
M LKQIQAHMTRTGLI H FP SR+L+F AL GDI YA LLFSQI +PN Y+WNTM+
Sbjct: 1 MLDLKQIQAHMTRTGLIAHTFPASRVLAFCALADAGDIRYARLLFSQIENPNTYMWNTMI 60
Query: 3 R 1
R
Sbjct: 61 R 61
>ref|XP_006361254.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Solanum tuberosum]
Length = 597
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 153 MTRTGLIFHIFPISRLLSFSALDPNGDINYANLLFSQIADPNIYIWNTMMR 1
M TG+I HIFPISRL+SF ALD NGDINYAN LFS+I PN+YIWNTM+R
Sbjct: 1 MIHTGMISHIFPISRLISFCALDVNGDINYANALFSEINKPNVYIWNTMIR 51
>ref|XP_006842814.1| hypothetical protein AMTR_s00081p00056740 [Amborella trichopoda]
gi|548844970|gb|ERN04489.1| hypothetical protein
AMTR_s00081p00056740 [Amborella trichopoda]
Length = 406
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/73 (49%), Positives = 54/73 (73%)
Frame = -1
Query: 219 HPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLLFSQI 40
HPTL L++SC SM QLKQI A +TGL F +S+++ F ++ P GD+++A+LLF I
Sbjct: 34 HPTLFLLQSCTSMKQLKQIHAQFFKTGLHNDQFALSKIIEFCSISPFGDLDFAHLLFGTI 93
Query: 39 ADPNIYIWNTMMR 1
++PN +IWNT++R
Sbjct: 94 SEPNQFIWNTLIR 106
>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = -1
Query: 219 HPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLLFSQI 40
HPTL LI+ C QLKQI A M RTGL F F SRL++ +AL P ++YA +F QI
Sbjct: 36 HPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQI 95
Query: 39 ADPNIYIWNTMMR 1
PN+Y WNT++R
Sbjct: 96 PHPNLYTWNTLIR 108
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = -1
Query: 219 HPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLLFSQI 40
HPTL LI+ C QLKQI A M RTGL F F SRL++ +AL P ++YA +F QI
Sbjct: 36 HPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQI 95
Query: 39 ADPNIYIWNTMMR 1
PN+Y WNT++R
Sbjct: 96 PHPNLYTWNTLIR 108
>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = -1
Query: 219 HPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLLFSQI 40
HPTL LI+ C QLKQI A M RTGL F F SRL++ +AL P ++YA +F QI
Sbjct: 36 HPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQI 95
Query: 39 ADPNIYIWNTMMR 1
PN+Y WNT++R
Sbjct: 96 PHPNLYTWNTLIR 108
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/73 (47%), Positives = 53/73 (72%)
Frame = -1
Query: 219 HPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLLFSQI 40
HP+L L+ C S+ KQI AH+ +TGL +F +S+L+ FSA+ +GDI+YA LF+ I
Sbjct: 30 HPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSI 89
Query: 39 ADPNIYIWNTMMR 1
+PN++IWN+M+R
Sbjct: 90 EEPNLFIWNSMIR 102
>ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, partial [Amborella
trichopoda] gi|548860532|gb|ERN18110.1| hypothetical
protein AMTR_s01859p00006880, partial [Amborella
trichopoda]
Length = 190
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSAL-DPNGDINYANLLFSQ 43
HP+L+L+E C + QL QI AH+ R GLIFH +P+SRLL+ SAL + ++YA +F Q
Sbjct: 34 HPSLILLERCKNTKQLPQIHAHLIRLGLIFHPYPLSRLLTISALSNSENALSYALKIFEQ 93
Query: 42 IADPNIYIWNTMMR 1
I PN+Y++NT++R
Sbjct: 94 IPQPNLYMYNTIIR 107
>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
Length = 738
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/74 (45%), Positives = 50/74 (67%)
Frame = -1
Query: 222 THPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLLFSQ 43
+HP L LI+ C S+ QLKQ+ A M RTG++F + S+L++ SAL ++YA +F Q
Sbjct: 30 SHPALSLIDQCTSIKQLKQVHAQMLRTGVLFDPYSASKLITASALSSFSSLDYARQVFDQ 89
Query: 42 IADPNIYIWNTMMR 1
I PN+Y WNT++R
Sbjct: 90 IPQPNVYTWNTLIR 103
>gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
Length = 714
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = -1
Query: 231 LIITHPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLL 52
L+ T P+L L+ C SM LKQ+ AH+ +TGL F +S+L+ F A+ P GD++YA L+
Sbjct: 30 LLQTQPSLTLLSKCKSMQNLKQVHAHIIKTGLHNTHFALSKLVEFCAISPFGDLSYALLV 89
Query: 51 FSQIADPNIYIWNTMMR 1
F I +PN IWNT++R
Sbjct: 90 FQSIENPNQIIWNTIIR 106
>gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 847
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = -1
Query: 231 LIITHPTLLLIESCHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLL 52
L+ HP+L L+ C ++ LKQ+ H+ +TGL F +S+L+ F A+ P GD+ YA LL
Sbjct: 85 LLQNHPSLSLLSKCRTIQTLKQVHCHIIKTGLHHTQFALSKLIEFCAVSPFGDLPYALLL 144
Query: 51 FSQIADPNIYIWNTMMR 1
F I +PN IWNTM+R
Sbjct: 145 FESIDEPNQVIWNTMIR 161
>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product
[Vitis vinifera]
Length = 533
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -1
Query: 228 IITHPTLLLIES-CHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLL 52
I HP L ++E C +M L++I AH+ +TGL H +S +L+F A P GDINYA L+
Sbjct: 21 ISDHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLV 80
Query: 51 FSQIADPNIYIWNTMMR 1
F+QI PN++ WNT++R
Sbjct: 81 FTQIHSPNLFSWNTIIR 97
>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
gi|587904202|gb|EXB92403.1| hypothetical protein
L484_021387 [Morus notabilis]
Length = 530
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/77 (49%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -1
Query: 228 IITHPTLLLIES-CHSMAQLKQIQAHMTRTGLIFHIFPISRLLSFSALDPNGDINYANLL 52
I P L ++E C +M+ L++I AH+ +TGLI H SRLL+F A P G+INYA ++
Sbjct: 23 ISDQPHLSMLEKRCATMSDLRKIHAHLIKTGLISHTIASSRLLAFCA-SPAGNINYALMV 81
Query: 51 FSQIADPNIYIWNTMMR 1
FSQI +PN++IWNT++R
Sbjct: 82 FSQIQNPNLFIWNTIIR 98