BLASTX nr result

ID: Catharanthus23_contig00021721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00021721
         (1608 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ11800.1| hypothetical protein PRUPE_ppa017098mg [Prunus pe...    65   8e-08
ref|XP_006366658.1| PREDICTED: probable ubiquitin-like-specific ...    63   3e-07
gb|ESW09944.1| hypothetical protein PHAVU_009G168700g [Phaseolus...    63   3e-07
ref|XP_004253246.1| PREDICTED: uncharacterized protein LOC101254...    63   3e-07
ref|XP_003522425.2| PREDICTED: probable ubiquitin-like-specific ...    62   5e-07

>gb|EMJ11800.1| hypothetical protein PRUPE_ppa017098mg [Prunus persica]
          Length = 303

 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
 Frame = -3

Query: 1573 EQSEDSKLVMLLLDSLHTINIS-LEPEIRK*VYFNN*DV**VHIE*KLNIFLSDDVLSLF 1397
            EQSE  K  MLLLDSL   +    EP+IRK V               L+I+ ++      
Sbjct: 186  EQSETHKPCMLLLDSLENADPRRYEPDIRKFV---------------LDIYEAEG----- 225

Query: 1396 LTCPNYTMKKQLRIQLRTYPIPKVPQQKGGVDCGWYSLHFVKLFVENAPDHVSIGGGYPY 1217
                + T     RI    + +PKVPQQ+  V+CG + L+++ LF+E AP++ SI GGYPY
Sbjct: 226  ---RSETKDFIYRIP---FLVPKVPQQRNDVECGNFVLYYINLFIEGAPENFSIEGGYPY 279

Query: 1216 FV 1211
            F+
Sbjct: 280  FM 281


>ref|XP_006366658.1| PREDICTED: probable ubiquitin-like-specific protease 2B-like [Solanum
            tuberosum]
          Length = 427

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
 Frame = -3

Query: 1570 QSEDSKLVMLLLDSLHTINIS-LEPEIRK*VYFNN*DV**VHIE*KLNIFLSDDVLSLFL 1394
            QS++    MLLLDSLH  N    +P IRK V               +++F ++       
Sbjct: 291  QSKERSPCMLLLDSLHMANPERFDPGIRKFV---------------VDLFKAEQ------ 329

Query: 1393 TCPNYTMKKQLRIQLRTYP--IPKVPQQKGGVDCGWYSLHFVKLFVENAPDHVSIGGGYP 1220
                   + + + Q+   P  IPKVPQQ+   DCG + L+++ LF+E+AP++ SI  GYP
Sbjct: 330  -------RPETKDQIMKIPLMIPKVPQQRNDEDCGNFVLYYINLFLESAPENFSISKGYP 382

Query: 1219 YFV 1211
            YF+
Sbjct: 383  YFM 385


>gb|ESW09944.1| hypothetical protein PHAVU_009G168700g [Phaseolus vulgaris]
          Length = 268

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
 Frame = -3

Query: 1570 QSEDSKLVMLLLDSLHTINIS-LEPEIRK*VYFNN*DV**VHIE*KLNIFLSDDVLSLFL 1394
            QS      MLLLDSL   N   LEPEIR+ V               L+I+ S D      
Sbjct: 154  QSSTRSRCMLLLDSLEMANPRRLEPEIRRFV---------------LDIYKSGD------ 192

Query: 1393 TCPNYTMKKQLRIQLRTYPIPKVPQQKGGVDCGWYSLHFVKLFVENAPDHVSIGGGYPYF 1214
                    K +  Q+  + +PKVPQQ+ G +CG++ L+F+ LF+E+APD+ S+  GYPYF
Sbjct: 193  ----RPETKNILSQI-PFLVPKVPQQRDGNECGFFVLYFINLFLEHAPDNFSM-EGYPYF 246

Query: 1213 VNYSNESF 1190
            +     SF
Sbjct: 247  MTKDWFSF 254


>ref|XP_004253246.1| PREDICTED: uncharacterized protein LOC101254774 [Solanum
            lycopersicum]
          Length = 460

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
 Frame = -3

Query: 1570 QSEDSKLVMLLLDSLHTINIS-LEPEIRK*VYFNN*DV**VHIE*KLNIFLSDDVLSLFL 1394
            QS++    MLLLDSLH  N    +P IRK V               +++F ++       
Sbjct: 324  QSKERSPCMLLLDSLHMANPERFDPGIRKFV---------------IDLFKAE------- 361

Query: 1393 TCPNYTMKKQLRIQLRTYP--IPKVPQQKGGVDCGWYSLHFVKLFVENAPDHVSIGGGYP 1220
                   + + + Q+   P  IPKVPQQ+   DCG + L+++ LF+E+AP++ SI  GYP
Sbjct: 362  ------QRPETKDQIMKIPLMIPKVPQQQNDEDCGNFVLYYINLFLESAPENFSISKGYP 415

Query: 1219 YFV 1211
            YF+
Sbjct: 416  YFM 418


>ref|XP_003522425.2| PREDICTED: probable ubiquitin-like-specific protease 2A-like [Glycine
            max]
          Length = 314

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
 Frame = -3

Query: 1570 QSEDSKLVMLLLDSLHTINIS-LEPEIRK*VYFNN*DV**VHIE*KLNIFLSDDVLSLFL 1394
            +S      MLLLDSL   N   LEPEIR+ V               L+I+ ++D      
Sbjct: 200  ESTTKSRCMLLLDSLEMTNPRRLEPEIRRFV---------------LDIYKTED------ 238

Query: 1393 TCPNYTMKKQLRIQLRTYPIPKVPQQKGGVDCGWYSLHFVKLFVENAPDHVSIGGGYPYF 1214
                    K L  Q+  + +PKVPQQ+ G +CG++ L+F+ LF+E+APD+ S+  GYPYF
Sbjct: 239  ----RPEAKHLVSQI-PFLVPKVPQQRDGNECGFFILYFINLFLEHAPDNFSM-EGYPYF 292

Query: 1213 VNYSNESF 1190
            +     SF
Sbjct: 293  MKKDWFSF 300


Top