BLASTX nr result
ID: Catharanthus23_contig00021701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00021701
(297 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 103 2e-20
emb|CBI15349.3| unnamed protein product [Vitis vinifera] 103 2e-20
gb|EOY22146.1| Nucleic acid binding,ATP-dependent helicases,ATP ... 98 1e-18
gb|EMJ12200.1| hypothetical protein PRUPE_ppa020942mg [Prunus pe... 94 2e-17
ref|XP_006399297.1| hypothetical protein EUTSA_v10012480mg [Eutr... 93 3e-17
ref|XP_002317947.2| hypothetical protein POPTR_0012s06280g [Popu... 93 4e-17
ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase H... 92 7e-17
ref|XP_004236502.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 91 1e-16
ref|XP_006345206.1| PREDICTED: putative ATP-dependent helicase H... 91 2e-16
ref|XP_006440816.1| hypothetical protein CICLE_v10018555mg [Citr... 91 2e-16
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 91 2e-16
ref|XP_006485704.1| PREDICTED: putative ATP-dependent helicase H... 88 1e-15
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ... 87 2e-15
ref|XP_002873340.1| predicted protein [Arabidopsis lyrata subsp.... 85 1e-14
ref|XP_006290022.1| hypothetical protein CARUB_v10003654mg [Caps... 82 7e-14
ref|NP_196428.2| UBQ, helicase-c and DEAD-like helicase domain-c... 81 1e-13
emb|CAB93712.1| putative protein [Arabidopsis thaliana] 81 1e-13
gb|EMS68357.1| Putative ATP-dependent helicase HRQ1 [Triticum ur... 78 1e-12
gb|EMT24567.1| Putative ATP-dependent helicase HRQ1 [Aegilops ta... 74 2e-11
ref|XP_004301098.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 74 2e-11
>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
HRQ1-like [Vitis vinifera]
Length = 1231
Score = 103 bits (257), Expect = 2e-20
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = -3
Query: 295 NKMVDFFSLEDL-ISVKECDIAAEGQGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLK 119
N+M FSLEDL ISVKE Q RRS SS++SA+ +CH+TNPLLP EM+EHL+
Sbjct: 382 NEMAMLFSLEDLLISVKEGGAGKAKQARRSWSAVSSTNSAQSKCHDTNPLLPMEMVEHLR 441
Query: 118 SGIGSEGQIVHVEQINARKANYVEIPSELSKSTTFALK 5
G+G +GQ+VHVE+I AR A VEIP ELS++T AL+
Sbjct: 442 KGMGCQGQMVHVEEICARMAIRVEIPDELSENTKSALE 479
>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
Length = 1188
Score = 103 bits (257), Expect = 2e-20
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = -3
Query: 295 NKMVDFFSLEDL-ISVKECDIAAEGQGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLK 119
N+M FSLEDL ISVKE Q RRS SS++SA+ +CH+TNPLLP EM+EHL+
Sbjct: 322 NEMAMLFSLEDLLISVKEGGAGKAKQARRSWSAVSSTNSAQSKCHDTNPLLPMEMVEHLR 381
Query: 118 SGIGSEGQIVHVEQINARKANYVEIPSELSKSTTFALK 5
G+G +GQ+VHVE+I AR A VEIP ELS++T AL+
Sbjct: 382 KGMGCQGQMVHVEEICARMAIRVEIPDELSENTKSALE 419
>gb|EOY22146.1| Nucleic acid binding,ATP-dependent helicases,ATP
binding,helicases,ATP-dependent helicases isoform 1
[Theobroma cacao]
Length = 1208
Score = 97.8 bits (242), Expect = 1e-18
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 5/97 (5%)
Frame = -3
Query: 277 FSLEDLISV-KECDIAAEG----QGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLKSG 113
FSLEDL+ KE D +E + RRS +AS+SHS K RCH+T+ LLP EM+EHL+
Sbjct: 355 FSLEDLLIFWKEGDKVSERNETKRARRSWSSASNSHSVKRRCHDTSQLLPAEMVEHLRKS 414
Query: 112 IGSEGQIVHVEQINARKANYVEIPSELSKSTTFALKS 2
IG + Q+VHVE I ARKA+YVEIP ELS +T AL+S
Sbjct: 415 IGLDRQMVHVENIGARKASYVEIPKELSDNTKSALQS 451
>gb|EMJ12200.1| hypothetical protein PRUPE_ppa020942mg [Prunus persica]
Length = 1045
Score = 93.6 bits (231), Expect = 2e-17
Identities = 55/109 (50%), Positives = 70/109 (64%), Gaps = 11/109 (10%)
Frame = -3
Query: 295 NKMVDFFSLEDL-ISVKECDIAAEGQGRR-------SGCNASSSHSAKPR---CHETNPL 149
N++ FSLEDL ISVKECD AA G + + N HSA R CH T+ L
Sbjct: 219 NEISRDFSLEDLLISVKECDSAARGNEAKQSRITPAASNNFDRKHSAASRTHRCHGTDSL 278
Query: 148 LPKEMMEHLKSGIGSEGQIVHVEQINARKANYVEIPSELSKSTTFALKS 2
LP+EM+EHL+ GIG++GQ+VHVE I AR+ YVE+P ELS++ AL S
Sbjct: 279 LPEEMVEHLRKGIGAKGQVVHVEDIGARRPVYVEVPHELSENMRSALHS 327
>ref|XP_006399297.1| hypothetical protein EUTSA_v10012480mg [Eutrema salsugineum]
gi|557100387|gb|ESQ40750.1| hypothetical protein
EUTSA_v10012480mg [Eutrema salsugineum]
Length = 1196
Score = 93.2 bits (230), Expect = 3e-17
Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Frame = -3
Query: 274 SLED-LISVKECDIAAEGQGRRSGCNA---SSSHSAKPRCHETNPLLPKEMMEHLKSGIG 107
SLED LI +E + R++G ++ S SHS++ CH+ N LLP EM+EHL++G G
Sbjct: 337 SLEDMLIFAREGKGVGGNEARQAGKDSFPHSGSHSSRTLCHDKNSLLPAEMVEHLRNGFG 396
Query: 106 SEGQIVHVEQINARKANYVEIPSELSKSTTFALK 5
S+GQIVHVE INARKA YVEIP ELS+ T ALK
Sbjct: 397 SKGQIVHVEDINARKAVYVEIPDELSEFTKSALK 430
>ref|XP_002317947.2| hypothetical protein POPTR_0012s06280g [Populus trichocarpa]
gi|550326490|gb|EEE96167.2| hypothetical protein
POPTR_0012s06280g [Populus trichocarpa]
Length = 671
Score = 92.8 bits (229), Expect = 4e-17
Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 5/102 (4%)
Frame = -3
Query: 295 NKMVDFFSLEDLISVKECD--IAAEGQGRRS-GCN--ASSSHSAKPRCHETNPLLPKEMM 131
N++ FSLEDL+ D +E + +++ GC+ ASSS+S + RCHETN LLP EM+
Sbjct: 330 NRVAMPFSLEDLLKFVRKDGISVSESEAKQAKGCHSLASSSYSFQTRCHETNQLLPVEMV 389
Query: 130 EHLKSGIGSEGQIVHVEQINARKANYVEIPSELSKSTTFALK 5
EHL+ GIGS+GQIVHVE I++RK YV++P+ LS + ALK
Sbjct: 390 EHLREGIGSKGQIVHVEDIDSRKPIYVQVPNVLSDNMKSALK 431
>ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase HRQ1-like, partial
[Cucumis sativus]
Length = 489
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Frame = -3
Query: 277 FSLEDLISVKECDI--AAEGQGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLKSGIGS 104
FSLE LI+ E D+ + + ++S +SSS S + RCH+T LLP++M+EHL +G
Sbjct: 386 FSLEALITSNETDVDGSETKRAKKSDTASSSSQSDRIRCHDTLKLLPEDMVEHLGKSVGP 445
Query: 103 EGQIVHVEQINARKANYVEIPSELSKSTTFALK 5
EGQIVH+ I ARKANYVEIP ELS S ALK
Sbjct: 446 EGQIVHINDILARKANYVEIPKELSNSVVSALK 478
>ref|XP_004236502.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
HRQ1-like [Solanum lycopersicum]
Length = 1225
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Frame = -3
Query: 274 SLEDLIS-VKECDIAAEG-QGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLKSGIGSE 101
SLED I+ VK+ I A G + +R+G +A +H C +TNP+ P EM+EHL+ GIGS+
Sbjct: 397 SLEDFITFVKQGGIGATGIETKRTGSHAFEAH-----CCDTNPMTPLEMVEHLRKGIGSD 451
Query: 100 GQIVHVEQINARKANYVEIPSELSKSTTFALKS 2
GQ+VH+E I AR A YVEIPS LS+ST ALK+
Sbjct: 452 GQVVHIENITARNATYVEIPSVLSESTVLALKN 484
>ref|XP_006345206.1| PREDICTED: putative ATP-dependent helicase HRQ1-like [Solanum
tuberosum]
Length = 1276
Score = 90.9 bits (224), Expect = 2e-16
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Frame = -3
Query: 274 SLEDLIS-VKECDIAAEG-QGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLKSGIGSE 101
SLED I+ VK+ I A G +R+G SH+ + C +TNP+ P EM+EHL+ GIGS+
Sbjct: 430 SLEDFITFVKQGGIGATGIDTKRAG-----SHAFEANCCDTNPMTPLEMVEHLRKGIGSD 484
Query: 100 GQIVHVEQINARKANYVEIPSELSKSTTFALKS 2
GQ+VH+E I AR A YVEIPS LS+ST ALK+
Sbjct: 485 GQVVHIENITARNATYVEIPSALSESTVLALKN 517
>ref|XP_006440816.1| hypothetical protein CICLE_v10018555mg [Citrus clementina]
gi|557543078|gb|ESR54056.1| hypothetical protein
CICLE_v10018555mg [Citrus clementina]
Length = 1216
Score = 90.9 bits (224), Expect = 2e-16
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Frame = -3
Query: 292 KMVDFFSLEDLIS-VKECDIAAEG----QGRRSGCNASSSHSAKPRCHETNPLLPKEMME 128
K V S+EDL++ VKE G + RRS + SSSHS + RC + + LLP EM+E
Sbjct: 382 KRVMSLSVEDLLTYVKERSTDVRGNEVKRARRSQSSTSSSHSFQRRCSDKSQLLPLEMVE 441
Query: 127 HLKSGIGSEGQIVHVEQINARKANYVEIPSELSKSTTFALKS 2
HL+ GIGS+GQ+VHVE I+ARKA VEIP LS +T ALKS
Sbjct: 442 HLRKGIGSQGQMVHVEDISARKAVLVEIPDALSDNTKSALKS 483
>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
HRQ1-like [Cucumis sativus]
Length = 1218
Score = 90.9 bits (224), Expect = 2e-16
Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Frame = -3
Query: 277 FSLEDLISVKECDI--AAEGQGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLKSGIGS 104
FSLE +I+ E D+ + + ++S +SSS S + RCH+T LLP++M+EHL +G
Sbjct: 386 FSLEAVITSNETDVDGSETKRAKKSDTASSSSQSDRIRCHDTLKLLPEDMVEHLGKSVGP 445
Query: 103 EGQIVHVEQINARKANYVEIPSELSKSTTFALK 5
EGQIVH+ I ARKANYVEIP ELS S ALK
Sbjct: 446 EGQIVHINDILARKANYVEIPKELSNSVVSALK 478
>ref|XP_006485704.1| PREDICTED: putative ATP-dependent helicase HRQ1-like [Citrus
sinensis]
Length = 1236
Score = 87.8 bits (216), Expect = 1e-15
Identities = 53/102 (51%), Positives = 66/102 (64%), Gaps = 5/102 (4%)
Frame = -3
Query: 292 KMVDFFSLEDLIS-VKECDIAAEG----QGRRSGCNASSSHSAKPRCHETNPLLPKEMME 128
K V S+EDL++ VKE G + RRS + SSSHS + RC + + LLP EM+E
Sbjct: 377 KRVMSLSVEDLLTYVKERSTDMRGNEVKRARRSQSSTSSSHSFQRRCSDKSQLLPLEMVE 436
Query: 127 HLKSGIGSEGQIVHVEQINARKANYVEIPSELSKSTTFALKS 2
HL+ GIGS+GQ+VHVE I ARKA VEIP L +T ALKS
Sbjct: 437 HLRKGIGSQGQMVHVEDIGARKAVLVEIPDALLDNTKSALKS 478
>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 1189
Score = 87.4 bits (215), Expect = 2e-15
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Frame = -3
Query: 295 NKMVDFFSLEDLIS-VKECDIAAEGQG--RRSGCNASSS--HSAKPRCHETNPLLPKEMM 131
N + FSLEDL++ VK ++ +G R SG +S S +S + CHETN L+P EM+
Sbjct: 339 NAIAMLFSLEDLLNFVKGGGVSEKGNEAKRESGRLSSISRPYSFRTHCHETNHLVPVEMV 398
Query: 130 EHLKSGIGSEGQIVHVEQINARKANYVEIPSELSKSTTFALK 5
+HL+ G+GS G +VHVE I+ARKA Y EIP ELS +T ALK
Sbjct: 399 QHLREGLGSNGHMVHVEDIDARKAIYAEIPHELSDNTKLALK 440
>ref|XP_002873340.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319177|gb|EFH49599.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1067
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -3
Query: 223 QGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLKSGIGSEGQIVHVEQINARKANYVEI 44
Q + C S S ++ C ETN LLP EM+EHL++GIGS+GQ+VHVE INARK+ YVE+
Sbjct: 326 QAGKGSCPTSGSRKSQTLCRETNSLLPSEMVEHLRNGIGSKGQVVHVEVINARKSAYVEM 385
Query: 43 PSELSKSTTFALK 5
+LS++T ALK
Sbjct: 386 SDKLSETTKSALK 398
>ref|XP_006290022.1| hypothetical protein CARUB_v10003654mg [Capsella rubella]
gi|482558728|gb|EOA22920.1| hypothetical protein
CARUB_v10003654mg [Capsella rubella]
Length = 1153
Score = 82.0 bits (201), Expect = 7e-14
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Frame = -3
Query: 274 SLEDLISVKECDIAAEG----QGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLKSGIG 107
S ED++ A G Q + C+ S S + CH+TN LLP EM+EHL+ GIG
Sbjct: 297 SFEDMLKFSTEGRALGGNKARQAGKGSCSFSGSRKPQTLCHDTNSLLPSEMVEHLRHGIG 356
Query: 106 SEGQIVHVEQINARKANYVEIPSELSKSTTFALK 5
S+GQ+VHVE INARKA E+ +LS++T ALK
Sbjct: 357 SKGQVVHVEVINARKAACAEMSEKLSETTKSALK 390
>ref|NP_196428.2| UBQ, helicase-c and DEAD-like helicase domain-containing protein
[Arabidopsis thaliana] gi|332003865|gb|AED91248.1| UBQ,
helicase-c and DEAD-like helicase domain-containing
protein [Arabidopsis thaliana]
Length = 1141
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = -3
Query: 223 QGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLKSGIGSEGQIVHVEQINARKANYVEI 44
Q + C S S + CH TN LLP EM+EHL++GIGS+GQ+VHVE I ARK+ YVE+
Sbjct: 315 QAGKGTCPTSGSRKFQTLCHATNSLLPSEMVEHLRNGIGSKGQVVHVEVIKARKSAYVEM 374
Query: 43 PSELSKSTTFALK 5
+LS++T ALK
Sbjct: 375 SDKLSETTKSALK 387
>emb|CAB93712.1| putative protein [Arabidopsis thaliana]
Length = 1058
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = -3
Query: 223 QGRRSGCNASSSHSAKPRCHETNPLLPKEMMEHLKSGIGSEGQIVHVEQINARKANYVEI 44
Q + C S S + CH TN LLP EM+EHL++GIGS+GQ+VHVE I ARK+ YVE+
Sbjct: 315 QAGKGTCPTSGSRKFQTLCHATNSLLPSEMVEHLRNGIGSKGQVVHVEVIKARKSAYVEM 374
Query: 43 PSELSKSTTFALK 5
+LS++T ALK
Sbjct: 375 SDKLSETTKSALK 387
>gb|EMS68357.1| Putative ATP-dependent helicase HRQ1 [Triticum urartu]
Length = 866
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = -3
Query: 229 EGQGRRSGCNASSS--HSAKPRCHETNPLLPKEMMEHLKSGIGSEGQIVHVEQINARKAN 56
EG ++ N SS SA CH+ +PL P EM+EHLK+G+G EGQIVH+E+I R+A+
Sbjct: 156 EGASKQPSMNKKSSFVRSAASSCHDKHPLGPAEMVEHLKNGLGKEGQIVHIEEIPCRRAS 215
Query: 55 YVEIPSELSKSTTFALKS 2
Y E+P +LSK AL+S
Sbjct: 216 YSELPRDLSKVMRKALES 233
>gb|EMT24567.1| Putative ATP-dependent helicase HRQ1 [Aegilops tauschii]
Length = 915
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Frame = -3
Query: 229 EGQGRRSGCNASSS--HSAKPRCHETNPLLPKEMMEHLKSGIGSEGQIVHVEQINARKAN 56
+G ++ N S SA CH+ +PL P EM+EHLK+G+G EGQIVH+E+I R+A+
Sbjct: 156 DGASKQPSMNKKSGFVRSAASSCHDKHPLGPAEMVEHLKNGLGKEGQIVHIEEIPCRRAS 215
Query: 55 YVEIPSELSKSTTFALKS 2
Y E+P +LS+ AL+S
Sbjct: 216 YSELPRDLSEVMRKALES 233
>ref|XP_004301098.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
HRQ1-like [Fragaria vesca subsp. vesca]
Length = 1227
Score = 73.9 bits (180), Expect = 2e-11
Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 18/115 (15%)
Frame = -3
Query: 292 KMVDFFSLED-LISVKECDIAAEG----QGRRSGCN-----------ASSSHSAKPR--C 167
K + SLED LI VKEC AA G Q RS AS++ S K R C
Sbjct: 366 KRNEISSLEDFLIYVKECGAAARGNKVNQAMRSHTASTTDSDKNQSAASTTRSTKKRAGC 425
Query: 166 HETNPLLPKEMMEHLKSGIGSEGQIVHVEQINARKANYVEIPSELSKSTTFALKS 2
H T+PLLP EM+EHL+ +E +IVHVE I ARKA +VE+P EL+++ AL S
Sbjct: 426 HRTDPLLPVEMVEHLRKSFRAE-KIVHVEDIGARKAVHVEVPQELTENMRSALHS 479