BLASTX nr result
ID: Catharanthus23_contig00021559
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00021559
(233 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 83 4e-14
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 79 5e-13
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 79 5e-13
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 77 2e-12
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 76 4e-12
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 76 4e-12
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 76 4e-12
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 76 4e-12
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 75 7e-12
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 74 2e-11
ref|XP_004294137.1| PREDICTED: uncharacterized mitochondrial pro... 74 3e-11
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 74 3e-11
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 74 3e-11
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 74 3e-11
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 73 5e-11
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 72 6e-11
ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855... 72 6e-11
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 72 6e-11
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 72 8e-11
gb|EOY00074.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 72 1e-10
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/83 (49%), Positives = 58/83 (69%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TRP+L YSV +L QFMH+PR +H +AALRV++Y+KGT QG+ LRA++ + LQ CDS+
Sbjct: 889 VTRPDLAYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSD 948
Query: 182 YWG------SLANFFVSFGHSPI 232
+ SL+ + V G SPI
Sbjct: 949 WAACPVTRRSLSGWLVFLGQSPI 971
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TRP+L YSV +L QFM +PR +H +AALRV++Y+KGT QG+ LRA++ + LQ CDS+
Sbjct: 968 VTRPDLAYSVHILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSD 1027
Query: 182 YWG------SLANFFVSFGHSPI 232
+ SL+ + V G SPI
Sbjct: 1028 WAACPVTRRSLSGWLVFLGQSPI 1050
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TRP+L YSV +L QFM +PR +H +AALRV+ Y+KGT QG+ LRA++ + LQ CDS+
Sbjct: 1251 VTRPDLAYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDLSLQGWCDSD 1310
Query: 182 YWG------SLANFFVSFGHSPI 232
+ SL+ + V G SPI
Sbjct: 1311 WAACPVTKRSLSGWLVFLGQSPI 1333
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TRP++VYSV+ L QFM+ PR+ H +AALRVL+YIKG+ QGLFL + + L A CDS+
Sbjct: 1519 VTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFCDSD 1578
Query: 182 YWG------SLANFFVSFGHSPI 232
+ G S++ + V G S I
Sbjct: 1579 WGGCRMSRRSVSGYCVFLGSSLI 1601
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Frame = +2
Query: 5 TRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSNY 184
TRPEL Y + +L QFMH P+ H +AALRV++Y+K + QG+ LRANT + L A CDS++
Sbjct: 1277 TRPELSYVIHILSQFMHNPKPAHWEAALRVVRYLKSSPGQGILLRANTPLVLSAWCDSDF 1336
Query: 185 WG------SLANFFVSFGHSPI 232
SL +F+ G SP+
Sbjct: 1337 GACPHSDRSLTGWFIQLGGSPL 1358
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TRPEL YSV L QFM PRQDH +AA+RV++Y+K QG+ L + + +Q+ CDS+
Sbjct: 899 VTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSD 958
Query: 182 YWG------SLANFFVSFGHSPI 232
Y SL +FV G +PI
Sbjct: 959 YAACPLTRRSLTGYFVQLGDTPI 981
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TRPEL YSV L QFM PRQDH +AA+RV++Y+K QG+ L + + +Q+ CDS+
Sbjct: 899 VTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSD 958
Query: 182 YWG------SLANFFVSFGHSPI 232
Y SL +FV G +PI
Sbjct: 959 YAACPLTRRSLTGYFVQLGDTPI 981
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TRPEL YSV L QFM PRQDH +AA+RV++Y+K QG+ L + + +Q+ CDS+
Sbjct: 1258 VTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSD 1317
Query: 182 YWG------SLANFFVSFGHSPI 232
Y SL +FV G +PI
Sbjct: 1318 YAACPLTRRSLTGYFVQLGDTPI 1340
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TRP+L YSV L QFM +PR +H +AALRV +Y+KGT QG+ LR ++ + LQ CDS+
Sbjct: 1095 VTRPDLAYSVHXLSQFMQEPRIEHWEAALRVXRYLKGTXGQGILLRXDSDLSLQGWCDSD 1154
Query: 182 Y------WGSLANFFVSFGHSPI 232
+ SL+ + V G SPI
Sbjct: 1155 WAACPVTXRSLSGWLVFLGQSPI 1177
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Frame = +2
Query: 5 TRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSNY 184
TRPEL YSV VL QFM PR+ H DAALRV++Y+KG+ QG+ L A+ + L+ CDS++
Sbjct: 1292 TRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCDSDW 1351
Query: 185 WG------SLANFFVSFGHSPI 232
S++ + V G SPI
Sbjct: 1352 QSCPLTRRSISAYVVLLGGSPI 1373
>ref|XP_004294137.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 331
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/63 (50%), Positives = 49/63 (77%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
++RP++ Y+V VL +FMHQPR+ H +AALRV++Y+KG QGLF + + ++L+A CDS+
Sbjct: 121 VSRPDITYAVHVLSRFMHQPRKSHMEAALRVIRYLKGAPGQGLFFSSTSDLKLRAYCDSD 180
Query: 182 YWG 190
WG
Sbjct: 181 -WG 182
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/61 (52%), Positives = 48/61 (78%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TRP+L YSV ++ QFM +PR +H +AALRV++Y+KGT QG+ LRA++ + LQ CDS+
Sbjct: 1251 VTRPDLAYSVHIISQFMQEPRIEHWEAALRVVRYLKGTPGQGVLLRADSDLSLQGWCDSD 1310
Query: 182 Y 184
+
Sbjct: 1311 W 1311
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TRP L YSV +L QFM +PR +H + ALRV+ Y+KGT QG+ LRA++ + LQ CDS+
Sbjct: 919 VTRPNLAYSVHILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLRADSDLSLQGWCDSD 978
Query: 182 YWG------SLANFFVSFGHSPI 232
+ SL+ + V G S I
Sbjct: 979 WAACPVTRRSLSGWLVFLGQSHI 1001
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
+TR +L +SV +L +FM +PR+DH AALRV++Y+K QG+FLR + Q+ CDS+
Sbjct: 1123 VTRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCDSD 1182
Query: 182 YWG------SLANFFVSFGHSPI 232
+ G S+ +FV FG SPI
Sbjct: 1183 WAGDPMSRRSVTGYFVQFGDSPI 1205
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Frame = +2
Query: 5 TRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSNY 184
TRPEL Y++ +L QFM P+ DH +AALRV++Y+K + QG+ LR+NT + L CDS +
Sbjct: 1239 TRPELSYAIHMLSQFMSDPKADHMEAALRVVRYLKSSPGQGILLRSNTPLVLTGWCDSGF 1298
Query: 185 ------WGSLANFFVSFGHSPI 232
SL +F+ G SPI
Sbjct: 1299 DSCPITQRSLTGWFIQLGGSPI 1320
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Frame = +2
Query: 5 TRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSNY 184
TRPEL YSV VL QFM PR+ H +AA+R+++Y+KG+ QG+ L +N + L+ CDS++
Sbjct: 1282 TRPELSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCDSDF 1341
Query: 185 WG------SLANFFVSFGHSPI 232
SL+ + V G SPI
Sbjct: 1342 QSCPLTRRSLSAYVVLLGGSPI 1363
>ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
Length = 1011
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
ITRP+LVY+V +L QFM PRQ H DAA +VL+Y+K T QG+FL + ++L A CD++
Sbjct: 795 ITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDAD 854
Query: 182 YWG-------SLANFFVSFGHSPI 232
W S + + FG++PI
Sbjct: 855 -WARCKDTRRSTTGYCIFFGNAPI 877
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
ITRP+LVY+V +L QFM PRQ H DAA +VL+Y+K T QG+FL + ++L A CD++
Sbjct: 1268 ITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDAD 1327
Query: 182 YWG-------SLANFFVSFGHSPI 232
W S + + FG++PI
Sbjct: 1328 -WARCKDTRRSTTGYCIFFGNAPI 1350
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/63 (50%), Positives = 48/63 (76%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
++RP++ YSV VL +FMHQPR+ H +AALRV++Y+K QGLF +N+ +L+A CDS+
Sbjct: 1309 VSRPDITYSVHVLSRFMHQPRKLHMEAALRVVRYLKNAPGQGLFFSSNSDFRLRAYCDSD 1368
Query: 182 YWG 190
+ G
Sbjct: 1369 WAG 1371
>gb|EOY00074.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 1494
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Frame = +2
Query: 2 ITRPELVYSVKVLYQFMHQPRQDH*DAALRVLQYIKGTSRQGLFLRANTGIQLQAICDSN 181
ITRP++ Y V +L QFMH PRQ H +A RVL+Y+K QGL L +N + L+A CD++
Sbjct: 1150 ITRPDISYVVHLLSQFMHNPRQPHLNAVFRVLRYLKNAPGQGLLLPSNNSLSLRAYCDAD 1209
Query: 182 YWG------SLANFFVSFGHSPI 232
+ G S + + G SPI
Sbjct: 1210 WVGCPTTRRSTTGYIIFLGSSPI 1232