BLASTX nr result

ID: Catharanthus23_contig00021434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00021434
         (347 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006415907.1| hypothetical protein EUTSA_v10007125mg [Eutr...    57   2e-06
gb|EMJ28256.1| hypothetical protein PRUPE_ppa020938mg [Prunus pe...    57   3e-06
ref|XP_002315987.2| hypothetical protein POPTR_0010s14520g [Popu...    56   4e-06
ref|XP_004239429.1| PREDICTED: chaperonin 60 subunit beta 4, chl...    55   1e-05
ref|NP_173947.1| chaperonin 60 subunit beta 4 [Arabidopsis thali...    55   1e-05
ref|NP_001185097.1| chaperonin 60 subunit beta 4 [Arabidopsis th...    55   1e-05

>ref|XP_006415907.1| hypothetical protein EUTSA_v10007125mg [Eutrema salsugineum]
           gi|557093678|gb|ESQ34260.1| hypothetical protein
           EUTSA_v10007125mg [Eutrema salsugineum]
          Length = 604

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 32/32 (100%)
 Frame = +1

Query: 223 KIMQNTEEKFQKKIVNERIARLSGGIAILQLG 318
           K++QNTEE+FQKKI+NERIARLSGGIAI+Q+G
Sbjct: 383 KLVQNTEERFQKKILNERIARLSGGIAIIQVG 414


>gb|EMJ28256.1| hypothetical protein PRUPE_ppa020938mg [Prunus persica]
          Length = 611

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/32 (81%), Positives = 32/32 (100%)
 Frame = +1

Query: 223 KIMQNTEEKFQKKIVNERIARLSGGIAILQLG 318
           K+++NTEE+FQKKI+NERIARLSGGIAILQ+G
Sbjct: 384 KLVENTEEEFQKKILNERIARLSGGIAILQVG 415


>ref|XP_002315987.2| hypothetical protein POPTR_0010s14520g [Populus trichocarpa]
           gi|550329805|gb|EEF02158.2| hypothetical protein
           POPTR_0010s14520g [Populus trichocarpa]
          Length = 585

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/31 (83%), Positives = 31/31 (100%)
 Frame = +1

Query: 226 IMQNTEEKFQKKIVNERIARLSGGIAILQLG 318
           +++NTEEKFQKKI+NERIARLSGGIAILQ+G
Sbjct: 384 LVENTEEKFQKKILNERIARLSGGIAILQVG 414


>ref|XP_004239429.1| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like
           [Solanum lycopersicum]
          Length = 606

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/31 (77%), Positives = 31/31 (100%)
 Frame = +1

Query: 226 IMQNTEEKFQKKIVNERIARLSGGIAILQLG 318
           +++NTEEKFQKKI+NERIARLSGGIA++Q+G
Sbjct: 386 LVENTEEKFQKKILNERIARLSGGIAVIQVG 416


>ref|NP_173947.1| chaperonin 60 subunit beta 4 [Arabidopsis thaliana]
           gi|75308802|sp|Q9C667.1|CPNB4_ARATH RecName:
           Full=Chaperonin 60 subunit beta 4, chloroplastic;
           Short=CPN-60 beta 4; Flags: Precursor
           gi|12321186|gb|AAG50688.1|AC079829_21 chaperonin
           precursor, putative [Arabidopsis thaliana]
           gi|332192542|gb|AEE30663.1| chaperonin 60 subunit beta 4
           [Arabidopsis thaliana]
          Length = 611

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +1

Query: 226 IMQNTEEKFQKKIVNERIARLSGGIAILQLGRK*VGALTQ 345
           +++NTEE FQKKI+NER+ARLSGGIAI+Q     VGALTQ
Sbjct: 390 LIENTEENFQKKILNERVARLSGGIAIIQ-----VGALTQ 424


>ref|NP_001185097.1| chaperonin 60 subunit beta 4 [Arabidopsis thaliana]
           gi|332192543|gb|AEE30664.1| chaperonin 60 subunit beta 4
           [Arabidopsis thaliana]
          Length = 559

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +1

Query: 226 IMQNTEEKFQKKIVNERIARLSGGIAILQLGRK*VGALTQ 345
           +++NTEE FQKKI+NER+ARLSGGIAI+Q     VGALTQ
Sbjct: 338 LIENTEENFQKKILNERVARLSGGIAIIQ-----VGALTQ 372


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