BLASTX nr result

ID: Catharanthus23_contig00021402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00021402
         (340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ07587.1| hypothetical protein PRUPE_ppa018042mg [Prunus pe...    65   1e-08
ref|XP_004245394.1| PREDICTED: uncharacterized protein LOC101250...    61   1e-07
ref|XP_006359774.1| PREDICTED: uncharacterized protein LOC102599...    58   1e-06
ref|XP_004161429.1| PREDICTED: uncharacterized LOC101207232 [Cuc...    57   2e-06
ref|XP_004139573.1| PREDICTED: uncharacterized protein LOC101207...    57   2e-06
gb|EMJ02764.1| hypothetical protein PRUPE_ppa018158mg, partial [...    55   7e-06

>gb|EMJ07587.1| hypothetical protein PRUPE_ppa018042mg [Prunus persica]
          Length = 465

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
 Frame = -1

Query: 232 EAATA--TPSKVVCKDRRFYDCYNVTKYCPATCPRSCAVNCFTCEPQC 95
           EAAT+   P KV C+D++FY CY+   YCPA+CPR+C V+C  C+P C
Sbjct: 22  EAATSHPKPKKVKCQDKKFYKCYHKDLYCPASCPRTCVVDCKKCKPVC 69


>ref|XP_004245394.1| PREDICTED: uncharacterized protein LOC101250532 [Solanum
           lycopersicum]
          Length = 486

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = -1

Query: 217 TPSKVVCKDRRFYDCYNVTKYCPATCPRSCAVNCFTCEPQCLP 89
           +P KV C+D++F  CY  T  CPA CPRSC  +C +C+P CLP
Sbjct: 130 SPMKVKCQDKKFPKCYRKTFACPANCPRSCIADCDSCQPVCLP 172



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = -1

Query: 232 EAATATPSKVVCKDRRFYDCYNVTKYCPATCPRSCAVNCFTCEPQCLP 89
           E     P KV C+D++F  CY+   +CP  CPR+C  +C +C+P C+P
Sbjct: 22  EGGPPKPMKVKCQDKKFASCYHKDLFCPVNCPRTCIADCDSCQPICVP 69



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = -1

Query: 217 TPSKVVCKDRRFYDCYNVTKYCPATCPRSCAVNCFTCEPQCLP 89
           +P KV C+D+ F  CY+   +CP  CPR+C V+C +C+P C+P
Sbjct: 78  SPKKVKCQDKNFPKCYHKDLFCPVNCPRTCIVDCDSCQPICVP 120


>ref|XP_006359774.1| PREDICTED: uncharacterized protein LOC102599540 [Solanum tuberosum]
          Length = 479

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 22/43 (51%), Positives = 30/43 (69%)
 Frame = -1

Query: 217 TPSKVVCKDRRFYDCYNVTKYCPATCPRSCAVNCFTCEPQCLP 89
           +P KV C+D++F  CY+ T  CPA C RSC  +C +C+P CLP
Sbjct: 131 SPMKVKCQDKKFPKCYHKTFACPANCLRSCIADCDSCQPVCLP 173



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 19/43 (44%), Positives = 30/43 (69%)
 Frame = -1

Query: 217 TPSKVVCKDRRFYDCYNVTKYCPATCPRSCAVNCFTCEPQCLP 89
           +P KV C+++ F  CY+   +CP  CPR+C V+C +C+P C+P
Sbjct: 79  SPKKVKCQEKNFPKCYHKDLFCPVNCPRTCIVDCDSCQPICVP 121



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 19/48 (39%), Positives = 30/48 (62%)
 Frame = -1

Query: 232 EAATATPSKVVCKDRRFYDCYNVTKYCPATCPRSCAVNCFTCEPQCLP 89
           E     P KV C+D++F  CY+   +CP +CP +C  +C +C+P C+P
Sbjct: 23  EGGPPKPMKVKCQDKKFPSCYHKDLFCPVSCPHTCIADCDSCQPICVP 70


>ref|XP_004161429.1| PREDICTED: uncharacterized LOC101207232 [Cucumis sativus]
          Length = 466

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = -1

Query: 208 KVVCKDRRFYDCYNVTKYCPATCPRSCAVNCFTCEPQCLP 89
           KV CKD++F  CY    YCPA C R+C V+C +C+P C P
Sbjct: 27  KVKCKDKKFPQCYKSEHYCPADCLRTCVVDCSSCQPVCTP 66


>ref|XP_004139573.1| PREDICTED: uncharacterized protein LOC101207232 [Cucumis sativus]
          Length = 456

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = -1

Query: 208 KVVCKDRRFYDCYNVTKYCPATCPRSCAVNCFTCEPQCLP 89
           KV CKD++F  CY    YCPA C R+C V+C +C+P C P
Sbjct: 27  KVKCKDKKFPQCYKSEHYCPADCLRTCVVDCSSCQPVCTP 66


>gb|EMJ02764.1| hypothetical protein PRUPE_ppa018158mg, partial [Prunus persica]
          Length = 419

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 19/47 (40%), Positives = 30/47 (63%)
 Frame = -1

Query: 223 TATPSKVVCKDRRFYDCYNVTKYCPATCPRSCAVNCFTCEPQCLPNQ 83
           + +P K  CK++ +  CYN+   CP++CP  C V+C TC+P C  +Q
Sbjct: 114 STSPKKAKCKNKYYPQCYNIEHVCPSSCPGGCEVDCVTCKPVCKCDQ 160


Top