BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00021346
         (1555 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006381622.1| pentatricopeptide repeat-containing family p...    94   1e-16
ref|XP_002326124.1| predicted protein [Populus trichocarpa]            94   1e-16
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-16
gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]      90   3e-15
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-15
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,...    88   1e-14
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-14
gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, put...    87   1e-14
gb|EMJ06024.1| hypothetical protein PRUPE_ppa004064mg [Prunus pe...    86   6e-14
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...    86   6e-14
ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-13
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr...    85   1e-13
gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]      84   1e-13
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-13
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-13
gb|ESW08136.1| hypothetical protein PHAVU_009G021500g [Phaseolus...    81   1e-12
ref|XP_006581144.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-12
ref|XP_006581143.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-12
ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-12
ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-12

>ref|XP_006381622.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550336330|gb|ERP59419.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 511

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 47/81 (58%), Positives = 56/81 (69%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHC+KGRM +AI++FN+M    CAPD ITVN L+SCLLKAGM  EAYRI+K  L+    
Sbjct: 431  IGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNL 490

Query: 1374 GFSSAGGPKPFRASMDITVAV 1312
            G SS     P R + DI VAV
Sbjct: 491  GLSSFEKAIPLRTNTDIPVAV 511


>ref|XP_002326124.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 47/81 (58%), Positives = 56/81 (69%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHC+KGRM +AI++FN+M    CAPD ITVN L+SCLLKAGM  EAYRI+K  L+    
Sbjct: 432  IGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNL 491

Query: 1374 GFSSAGGPKPFRASMDITVAV 1312
            G SS     P R + DI VAV
Sbjct: 492  GLSSFEKAIPLRTNTDIPVAV 512


>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Solanum tuberosum]
            gi|565370447|ref|XP_006351832.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X2 [Solanum tuberosum]
          Length = 550

 Score = 94.0 bits (232), Expect = 2e-16
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            +GHCMKGRM +A+ +F+KM  +GC PD ITV+CL SCLLKAGMV EAY+++    + L  
Sbjct: 470  LGHCMKGRMLEAMAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKEAYKVRLTPSKDLNP 529

Query: 1374 GFSSAGGPKPFRASMDITVAV 1312
              SS+    PFR S+DI VAV
Sbjct: 530  DLSSSKQSVPFRTSLDIPVAV 550


>gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]
          Length = 570

 Score = 89.7 bits (221), Expect = 3e-15
 Identities = 47/81 (58%), Positives = 58/81 (71%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            +G+CMKGRM DAI VF KM  VGCAPD+ITV+CL+SCLLKAGM  EA+ IK+ V++ L  
Sbjct: 491  LGNCMKGRMVDAIGVFYKMLAVGCAPDKITVHCLMSCLLKAGMPNEAFHIKETVMKSLNV 550

Query: 1374 GFSSAGGPKPFRASMDITVAV 1312
            G SS       RA  +I +AV
Sbjct: 551  GMSSLRS-NHMRAIAEIPMAV 570


>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Solanum lycopersicum]
          Length = 550

 Score = 89.0 bits (219), Expect = 5e-15
 Identities = 43/81 (53%), Positives = 57/81 (70%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            +GHCMKGRM +A+ +F+KM  +GC PD IT++CL SCLLKAGMV EAY+++    + L  
Sbjct: 470  LGHCMKGRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAGMVKEAYKVRLIPSKDLNP 529

Query: 1374 GFSSAGGPKPFRASMDITVAV 1312
              S +    PFR S+DI VAV
Sbjct: 530  DLSPSKLFIPFRTSLDIPVAV 550


>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 532

 Score = 87.8 bits (216), Expect = 1e-14
 Identities = 42/80 (52%), Positives = 54/80 (67%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHCMKGRM +A+D+F KM  +GCAPD IT++ LV+CLLKAG  +EA+ I +   + L  
Sbjct: 452  IGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASEDLNL 511

Query: 1374 GFSSAGGPKPFRASMDITVA 1315
             FSS     P R   DI+VA
Sbjct: 512  SFSSLRKTFPMRVKTDISVA 531


>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Citrus sinensis]
            gi|568841566|ref|XP_006474729.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X2 [Citrus sinensis]
          Length = 595

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 44/80 (55%), Positives = 52/80 (65%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHCMKGRM +AI +FNKM  +GCAPD ITVN L+SCLLK GM  EA+RI +   + L  
Sbjct: 515  IGHCMKGRMVEAISIFNKMLTIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDLNL 574

Query: 1374 GFSSAGGPKPFRASMDITVA 1315
               S     P R + DI VA
Sbjct: 575  QLPSWKKAVPLRTNTDIPVA 594


>gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
            cacao]
          Length = 592

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 43/80 (53%), Positives = 53/80 (66%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHCMKGRM +AI +FNKM  VGC PD +TVN L+SCLLKAGM +EA RI K   + ++ 
Sbjct: 512  IGHCMKGRMFEAISIFNKMLSVGCTPDDVTVNSLISCLLKAGMPSEASRITKMASEDMKL 571

Query: 1374 GFSSAGGPKPFRASMDITVA 1315
            G S      P R +  + VA
Sbjct: 572  GSSLLENNSPLRINRGVPVA 591


>gb|EMJ06024.1| hypothetical protein PRUPE_ppa004064mg [Prunus persica]
          Length = 532

 Score = 85.5 bits (210), Expect = 6e-14
 Identities = 43/81 (53%), Positives = 54/81 (66%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            +G+CMKGRM +AI  F KM  +GCAPD ITV+ L+SCL+KAGM  EA+ IKK   + L  
Sbjct: 452  LGNCMKGRMSEAISNFKKMLAIGCAPDNITVDSLISCLMKAGMPNEAHHIKKIACEDLNL 511

Query: 1374 GFSSAGGPKPFRASMDITVAV 1312
            G S +      RA+  ITVAV
Sbjct: 512  GMSPSRRADHLRANAKITVAV 532


>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Vitis vinifera]
          Length = 641

 Score = 85.5 bits (210), Expect = 6e-14
 Identities = 42/80 (52%), Positives = 51/80 (63%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHCMKGR+ +AI +FN+M   GCAPD IT+  L+SCLLKAGM  EAYRI +   +    
Sbjct: 491  IGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASEDFNL 550

Query: 1374 GFSSAGGPKPFRASMDITVA 1315
            G  S     P R + DI VA
Sbjct: 551  GLKSLKRNVPLRTNTDIPVA 570


>ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Glycine max] gi|571448762|ref|XP_006577947.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g06000-like isoform X2 [Glycine max]
            gi|571448764|ref|XP_006577948.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X3 [Glycine max]
            gi|571448766|ref|XP_006577949.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X4 [Glycine max]
          Length = 510

 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 46/81 (56%), Positives = 54/81 (66%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHCMKGRM +AI +F+KM  VGCAPD ITVN L SCLLKAGM  EA R+KK + Q L  
Sbjct: 430  IGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKKVLAQNLTL 489

Query: 1374 GFSSAGGPKPFRASMDITVAV 1312
            G +S+        +  I VAV
Sbjct: 490  GITSSKKSYHETTNESIPVAV 510


>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
            gi|557556032|gb|ESR66046.1| hypothetical protein
            CICLE_v10007804mg [Citrus clementina]
          Length = 595

 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 43/80 (53%), Positives = 51/80 (63%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHCMKGRM +AI +FNKM  +GCAPD ITVN L+SCLLK GM  EA+RI +   +    
Sbjct: 515  IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574

Query: 1374 GFSSAGGPKPFRASMDITVA 1315
               S     P R + DI VA
Sbjct: 575  QLPSWKKAVPLRTNTDIPVA 594


>gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]
          Length = 732

 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 39/61 (63%), Positives = 46/61 (75%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IG+CMKGRM +AI VFNKM  VGCAP+  T NCL+SCLLKAGM  EA+ IKK  ++ L  
Sbjct: 653  IGNCMKGRMLEAIGVFNKMKAVGCAPESRTANCLISCLLKAGMPNEAFSIKKSAIEDLNL 712

Query: 1374 G 1372
            G
Sbjct: 713  G 713


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Cucumis sativus]
          Length = 548

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 45/81 (55%), Positives = 53/81 (65%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IG+CMKGRM +AI  F KM  + C PD IT+N L+SCLLKAGM  EA +IK+  LQ L  
Sbjct: 468  IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNL 527

Query: 1374 GFSSAGGPKPFRASMDITVAV 1312
            G SS G P   R S  + VAV
Sbjct: 528  GLSSLGSPLT-RKSSRVPVAV 547


>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Cucumis sativus]
          Length = 548

 Score = 82.4 bits (202), Expect = 5e-13
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IG+CMKGRM +AI  F KM  + C PD IT+N L+SCLLKAGM  EA +IK+  LQ L  
Sbjct: 468  IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNL 527

Query: 1374 GFSSAGGPKPFRAS 1333
            G SS G P   ++S
Sbjct: 528  GLSSLGSPLTRKSS 541


>gb|ESW08136.1| hypothetical protein PHAVU_009G021500g [Phaseolus vulgaris]
          Length = 452

 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 41/64 (64%), Positives = 46/64 (71%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHCMKGRM +AI +FNKM  VGCAPD ITVN L SCLLK GM  EA R+K+ + Q L  
Sbjct: 365  IGHCMKGRMPEAISIFNKMLAVGCAPDEITVNNLRSCLLKVGMPGEAARVKEVLSQNLPC 424

Query: 1374 GFSS 1363
              SS
Sbjct: 425  STSS 428


>ref|XP_006581144.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X2 [Glycine max]
          Length = 581

 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 41/65 (63%), Positives = 48/65 (73%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHCMKGRM +AI  F+KM  VGCAPD ITVN L SCLLKAGM  EA R+K+ + Q L  
Sbjct: 431  IGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKEVLAQNLTL 490

Query: 1374 GFSSA 1360
            G +S+
Sbjct: 491  GTTSS 495


>ref|XP_006581143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Glycine max]
          Length = 598

 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 41/65 (63%), Positives = 48/65 (73%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHCMKGRM +AI  F+KM  VGCAPD ITVN L SCLLKAGM  EA R+K+ + Q L  
Sbjct: 431  IGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKEVLAQNLTL 490

Query: 1374 GFSSA 1360
            G +S+
Sbjct: 491  GTTSS 495


>ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Brachypodium distachyon]
          Length = 560

 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 45/81 (55%), Positives = 53/81 (65%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            IGHCMKGR+ +AI  FNKM   GC+PD ITVN  + CLLKAGM +E  RI K +  G  S
Sbjct: 483  IGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIMK-IASGSTS 541

Query: 1374 GFSSAGGPKPFRASMDITVAV 1312
              SS   P P   S+DI+VAV
Sbjct: 542  --SSQEVPSPVSQSIDISVAV 560


>ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Fragaria vesca subsp. vesca]
          Length = 583

 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 43/81 (53%), Positives = 56/81 (69%)
 Frame = -2

Query: 1554 IGHCMKGRMHDAIDVFNKMSLVGCAPDRITVNCLVSCLLKAGMVTEAYRIKKDVLQGLQS 1375
            +G+ MKGRM +AI  F+KM  +GCAPD+IT++ L+SCL KAGM +EA RIKK   + L  
Sbjct: 504  LGNSMKGRMSEAIGNFSKMLSIGCAPDKITIDSLISCLSKAGMPSEAGRIKKIAYEDLNM 563

Query: 1374 GFSSAGGPKPFRASMDITVAV 1312
            G  S G P   RA+ +I VAV
Sbjct: 564  GAPSMGRPPHLRAN-EIPVAV 583