BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00021328
         (492 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251201.1| PREDICTED: TATA box-binding protein-associat...    73   4e-11
ref|XP_006340292.1| PREDICTED: TATA box-binding protein-associat...    71   1e-10
ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241...    64   2e-08
emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]    64   2e-08
gb|EOY01936.1| Maternal effect embryo arrest 12, putative [Theob...    57   3e-06
ref|XP_004291537.1| PREDICTED: TATA box-binding protein-associat...    56   6e-06

>ref|XP_004251201.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Solanum lycopersicum]
          Length = 652

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 42/96 (43%), Positives = 56/96 (58%)
 Frame = -1

Query: 303 MTARLQLTCTTCSNIVFKDGGDGFYYCSLCNSRAXXXXXXXXXXXXXXXXXDGGMYSASH 124
           MT ++Q  C  C N+ F DGGDGF+YC+ C S+A                 DGGMYS S 
Sbjct: 1   MTEKIQRCCEVCGNLSFDDGGDGFFYCTRCGSQA-VDIMDTGVDDDDLFNVDGGMYSTSQ 59

Query: 123 RRHPSRQVLEPEPISQVKSMQSQHLDSLESFGVAEE 16
           RR    QV++P PISQV+   SQHL++L++F   +E
Sbjct: 60  RRQYC-QVIQPVPISQVQ--LSQHLETLKTFDDYDE 92


>ref|XP_006340292.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like isoform X1 [Solanum
           tuberosum] gi|565346503|ref|XP_006340293.1| PREDICTED:
           TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like isoform X2 [Solanum
           tuberosum]
          Length = 652

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 42/96 (43%), Positives = 55/96 (57%)
 Frame = -1

Query: 303 MTARLQLTCTTCSNIVFKDGGDGFYYCSLCNSRAXXXXXXXXXXXXXXXXXDGGMYSASH 124
           MT ++Q  C  C N+ F DGGDGF+YC+ C S+A                 DGGMYS S 
Sbjct: 1   MTEKIQRCCEVCGNLSFDDGGDGFFYCTRCGSQA-VDIMDTGVDDDDLFNVDGGMYSTSQ 59

Query: 123 RRHPSRQVLEPEPISQVKSMQSQHLDSLESFGVAEE 16
           RR    QV +P PISQV+   SQHL++L++F   +E
Sbjct: 60  RRQYC-QVSQPVPISQVQ--LSQHLETLKTFDDYDE 92


>ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241425 [Vitis vinifera]
          Length = 722

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
 Frame = -1

Query: 303 MTARLQLTCTTCSNIVFKDGGDGFYYCSLCNSRA--XXXXXXXXXXXXXXXXXDGGMYSA 130
           M  RL LTC  C ++ F DG DGF+YC  C S+A                    G +YSA
Sbjct: 1   MPERLDLTCHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGDARGAIYSA 60

Query: 129 SHRRHPSRQVLEPEPISQVKSMQSQHLDSLESFGVAEEDLDKE 1
           SHRR       +PEP+SQ +S    +L   + + V  E+  +E
Sbjct: 61  SHRRQRHSIAPKPEPLSQSQSQFLNNLTLDDDYRVENEETREE 103


>emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]
          Length = 722

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
 Frame = -1

Query: 303 MTARLQLTCTTCSNIVFKDGGDGFYYCSLCNSRA--XXXXXXXXXXXXXXXXXDGGMYSA 130
           M  RL LTC  C ++ F DG DGF+YC  C S+A                    G +YSA
Sbjct: 1   MPERLBLTCHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGDARGAIYSA 60

Query: 129 SHRRHPSRQVLEPEPISQVKSMQSQHLDSLESFGVAEEDLDKE 1
           SHRR       +PEP+SQ +S    +L   + + V  E+  +E
Sbjct: 61  SHRRQRHSIAPKPEPLSQSQSQFLNNLTLDDDYRVENEETREE 103


>gb|EOY01936.1| Maternal effect embryo arrest 12, putative [Theobroma cacao]
          Length = 734

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = -1

Query: 282 TCTTCSNIVFKDGGDGFYYCSLCNSRA--XXXXXXXXXXXXXXXXXDGGMYSASHRRHPS 109
           TC TC N+   DG DG+YYC  C S+A                    G +Y ASH RH  
Sbjct: 9   TCNTCGNVGMADGSDGYYYCFRCGSQADDVIDTGVADEDFIEKGSQGGALYLASHTRHAR 68

Query: 108 RQVLEPEPISQVKSMQSQ 55
           + V   +PISQ  S   Q
Sbjct: 69  QPVTPSQPISQFDSQSQQ 86


>ref|XP_004291537.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Fragaria vesca subsp.
           vesca]
          Length = 743

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
 Frame = -1

Query: 279 CTTCSNIVFKDGGDGFYYCSLCNSRA---XXXXXXXXXXXXXXXXXDGGMYSASHRRHPS 109
           C  C N+  +DG DGF+YC+ CNS+A                     GG+YSA H R  +
Sbjct: 9   CQNCGNVGLEDGDDGFFYCTQCNSQAEDFMDTGVADEDFLDQTGNPYGGLYSARHTRRVN 68

Query: 108 RQVLEPEPISQVKSMQSQHLDSLESFGVAEEDLD 7
             V++ EP+SQ     S + +         ED D
Sbjct: 69  SSVVKAEPLSQPLDDFSPYYEPFSQSQAKTEDQD 102