BLASTX nr result
ID: Catharanthus23_contig00021276
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00021276
(889 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 122 2e-25
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera] 110 5e-22
emb|CAN63563.1| hypothetical protein VITISV_003097 [Vitis vinifera] 101 4e-19
ref|XP_006847759.1| hypothetical protein AMTR_s00162p00033520 [A... 75 7e-19
emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera] 100 1e-18
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 75 2e-15
gb|ABA99612.1| retrotransposon protein, putative, unclassified [... 74 2e-14
gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat... 74 2e-14
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi... 82 5e-14
gb|ABA95820.1| retrotransposon protein, putative, unclassified [... 74 8e-14
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group] 72 1e-13
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza... 70 1e-13
emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera] 58 2e-13
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group] 73 2e-13
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 57 3e-13
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 57 3e-13
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 57 4e-13
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi... 64 5e-13
emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera] 66 5e-13
emb|CCA17441.1| putative polyprotein [Albugo laibachii Nc14] 67 5e-13
>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 122 bits (306), Expect = 2e-25
Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 5/105 (4%)
Frame = +1
Query: 160 RH-AEVCS----CQNDPPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFK 324
RH AE+C +N P +WAE M+TAA VINRLPQ RL F SPF+K+WN++PTV +F+
Sbjct: 584 RHLAEICRSMLHAKNVPGXFWAEXMKTAAFVINRLPQQRLNFSSPFEKLWNIKPTVSYFR 643
Query: 325 VFGFVCYMFVLDQLRMKFDKKTIRCIFVGDDSRRKGWSVVIPR*G 459
VFG VCY+FV + LR K DKK +RC+ VG DS+RK W P G
Sbjct: 644 VFGCVCYVFVPNHLRSKMDKKAVRCVLVGYDSQRKXWRCCDPTTG 688
Score = 73.2 bits (178), Expect = 1e-10
Identities = 53/141 (37%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Frame = +3
Query: 117 TPQE--VAKRMNRHLAETCRSMLMPK*PA*VLGRAYEDSCKCD**ATAGKARIQVTVSED 290
TPQ+ V +R NRHLAE CRSML K V G + + K + ++ S
Sbjct: 572 TPQQNGVXERKNRHLAEICRSMLHAKN---VPGXFWAEXMKTAAFVINRLPQQRLNFSSP 628
Query: 291 VERKTNGAPLQSIWLCLLHVC----P*STEDEV**EDHKMYLCGR**QKKRVECCDPTIG 458
E+ N P S + VC P ++ + + L G Q+K CCDPT G
Sbjct: 629 FEKLWNIKPTVSYFRVFGCVCYVFVPNHLRSKMDKKAVRCVLVGYDSQRKXWRCCDPTTG 688
Query: 459 RCYVSRNVVFDKASSWWFVEK 521
+CY SRNVVFD++SSWW EK
Sbjct: 689 KCYTSRNVVFDESSSWWSSEK 709
>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
Length = 1194
Score = 110 bits (276), Expect = 5e-22
Identities = 50/92 (54%), Positives = 63/92 (68%)
Frame = +1
Query: 184 QNDPPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQ 363
+N P +W E M+TAA VINRLPQ RL F SPF+K+WN++P V +F+VFG VCY FV +
Sbjct: 594 KNVPGRFWVEAMKTAAFVINRLPQQRLNFSSPFEKLWNIKPIVSYFRVFGCVCYAFVPNH 653
Query: 364 LRMKFDKKTIRCIFVGDDSRRKGWSVVIPR*G 459
R K DKK +RC+ VG DS+ K W P G
Sbjct: 654 XRSKMDKKXVRCVLVGYDSQXKRWRCCNPTTG 685
>emb|CAN63563.1| hypothetical protein VITISV_003097 [Vitis vinifera]
Length = 1052
Score = 101 bits (251), Expect = 4e-19
Identities = 58/119 (48%), Positives = 75/119 (63%), Gaps = 6/119 (5%)
Frame = +1
Query: 55 SQEFSNFL*ENKIRRQ-TFSPGLHKK*LKE*TGI*QRH-AEVCS----CQNDPPEYWAER 216
S EF FL E ++R Q T + L + + E RH AE+C +N P +WAE
Sbjct: 483 SNEFFYFLRECRVRHQFTCANTLQQNGVAERKN---RHLAEICRSMLHAKNVPGRFWAEA 539
Query: 217 MRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRMKFDKKTI 393
M+T A VINRLPQ RL F SPF+K+WN++PTV +F+VFG VCY+FV LR K DKK +
Sbjct: 540 MKTXAFVINRLPQQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVFVPKHLRNKMDKKAV 598
>ref|XP_006847759.1| hypothetical protein AMTR_s00162p00033520 [Amborella trichopoda]
gi|548851060|gb|ERN09340.1| hypothetical protein
AMTR_s00162p00033520 [Amborella trichopoda]
Length = 124
Score = 75.5 bits (184), Expect(2) = 7e-19
Identities = 33/68 (48%), Positives = 49/68 (72%)
Frame = +1
Query: 232 NVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRMKFDKKTIRCIFVG 411
++INRLPQ +L F +P++K+W ++ TV +FKVFG Y+ + L K +KKT+RCIFV
Sbjct: 2 HIINRLPQPKLGFITPYEKLWKIKATVIYFKVFGSTFYVLIPKTLHNKLEKKTLRCIFVR 61
Query: 412 DDSRRKGW 435
D+ RKG+
Sbjct: 62 YDTDRKGY 69
Score = 45.8 bits (107), Expect(2) = 7e-19
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 423 KKRVECCDPTIGRCYVSRNVVFDKASSWWFVEKT*TEDTLRKSR 554
+K CCD T RCY S +VVF +ASSWW + DT + +
Sbjct: 66 RKGYRCCDSTTNRCYTSLDVVFYEASSWWIPKTAKVSDTREEQK 109
>emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]
Length = 1161
Score = 99.8 bits (247), Expect = 1e-18
Identities = 57/122 (46%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Frame = +1
Query: 46 ENVSQEFSNFL*ENKIRRQ-TFSPGLHKK*LKE*TGI*QRH-AEVCS----CQNDPPEYW 207
E S EF FL E ++R Q T + + + E RH AE+C +N P +W
Sbjct: 522 EYTSDEFFYFLRECRVRHQFTCANTPQQNSVAERKN---RHLAEICRSMLHAKNVPRRFW 578
Query: 208 AERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRMKFDKK 387
AE M+T A VINRLPQ +L F SPF+K+WN++PT+ +F+VFG VCY+FV + LR K DKK
Sbjct: 579 AEAMKTVAFVINRLPQQKLNFSSPFEKLWNIKPTISYFRVFGCVCYVFVPNHLRSKMDKK 638
Query: 388 TI 393
I
Sbjct: 639 EI 640
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 75.1 bits (183), Expect(2) = 2e-15
Identities = 36/86 (41%), Positives = 53/86 (61%)
Frame = +1
Query: 193 PPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRM 372
P E+WAE ++ A V NR P V+L+ ++P + +PTV H KVFG V Y V DQ R
Sbjct: 673 PKEFWAEAVQCAIYVQNRCPHVKLDDQTPQEAWSGQKPTVSHLKVFGSVAYAHVPDQRRT 732
Query: 373 KFDKKTIRCIFVGDDSRRKGWSVVIP 450
K + K+ R +F+G D + KG+ ++ P
Sbjct: 733 KLEDKSKRYVFIGYDEKTKGYKLLDP 758
Score = 34.3 bits (77), Expect(2) = 2e-15
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 12 KKIRCLRTDNGGECVTRVLKLPLRKQD-KKTNVFPRTPQE--VAKRMNRHLAETCRSMLM 182
K+I+ +R+D GGE + +Q ++ P TPQ+ VA+R NR + + RSML
Sbjct: 609 KQIKAVRSDRGGEYTSTTFMEYCEEQGIRRFLTAPYTPQQNGVAERKNRTILDMVRSMLK 668
Query: 183 PK 188
K
Sbjct: 669 SK 670
>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1198
Score = 73.6 bits (179), Expect(3) = 2e-14
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +1
Query: 193 PPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRM 372
P +WAE + TA ++NR P + ++PF+ + +P + H +VFG +CY V Q R+
Sbjct: 593 PKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRV 652
Query: 373 KFDKKTIRCIFVGDDSRRKGW 435
KFD K+ RCIFVG KG+
Sbjct: 653 KFDNKSDRCIFVGYADGIKGY 673
Score = 29.6 bits (65), Expect(3) = 2e-14
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 12 KKIRCLRTDNGGECVTRVLK-----LPLRKQDKKTNVFPRTPQEVAKRMNRHLAETCRSM 176
+KI+ LR+D GGE +++ + +R+Q T + VA+R NR + + SM
Sbjct: 529 RKIKVLRSDQGGEYISKEFEKYCENAGIRRQ--LTAGYSAQQNGVAERKNRTINDMANSM 586
Query: 177 LMPK 188
L K
Sbjct: 587 LQDK 590
Score = 22.7 bits (47), Expect(3) = 2e-14
Identities = 6/13 (46%), Positives = 13/13 (100%)
Frame = +3
Query: 468 VSRNVVFDKASSW 506
+SR+V+FD++++W
Sbjct: 685 ISRDVIFDESATW 697
>gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108708461|gb|ABF96256.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1167
Score = 73.6 bits (179), Expect(3) = 2e-14
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +1
Query: 193 PPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRM 372
P +WAE + TA ++NR P + ++PF+ + +P + H +VFG +CY V Q R+
Sbjct: 516 PKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRV 575
Query: 373 KFDKKTIRCIFVGDDSRRKGW 435
KFD K+ RCIFVG KG+
Sbjct: 576 KFDNKSDRCIFVGYADGIKGY 596
Score = 29.6 bits (65), Expect(3) = 2e-14
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 12 KKIRCLRTDNGGECVTRVLK-----LPLRKQDKKTNVFPRTPQEVAKRMNRHLAETCRSM 176
+KI+ LR+D GGE +++ + +R+Q T + VA+R NR + + SM
Sbjct: 452 RKIKVLRSDQGGEYISKEFEKYCENAGIRRQ--LTAGYSAQQNGVAERKNRTINDMANSM 509
Query: 177 LMPK 188
L K
Sbjct: 510 LQDK 513
Score = 22.7 bits (47), Expect(3) = 2e-14
Identities = 6/13 (46%), Positives = 13/13 (100%)
Frame = +3
Query: 468 VSRNVVFDKASSW 506
+SR+V+FD++++W
Sbjct: 608 ISRDVIFDESATW 620
>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 822
Score = 82.0 bits (201), Expect(2) = 5e-14
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Frame = +1
Query: 46 ENVSQEFSNFL*ENKIRRQ---TFSPGLHKK*LKE*TGI*QRHAEVCSCQNDPPEYWAER 216
E +S+EFS FL N I RQ +SP ++ + + + + ++ P + WAE
Sbjct: 292 EYLSKEFSEFLEGNGIERQLTAAYSPQQNEVSERRNRSLVEMARAMIKAKDLPLKLWAEA 351
Query: 217 MRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRMKFDKKTIR 396
+ AA NR P L+ K+P + + +P+V H KVFG +CY+ + D+ R K+D K+ R
Sbjct: 352 VHVAAYAQNRTPTRTLKNKTPLEAWSDSKPSVSHMKVFGSICYVHIPDEKRRKWDDKSKR 411
Query: 397 CIFVGDDSRRKGWSVVI 447
IFVG S+ KG+ V +
Sbjct: 412 AIFVGYSSQTKGYRVYL 428
Score = 22.7 bits (47), Expect(2) = 5e-14
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 468 VSRNVVFDKASSWWFVEK 521
+SR+V+FD+ S W + +K
Sbjct: 436 ISRDVIFDEDSKWDWEKK 453
>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1142
Score = 73.6 bits (179), Expect(3) = 8e-14
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +1
Query: 193 PPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRM 372
P +WAE + TA ++NR P + ++PF+ + +P + H +VFG +CY V Q R+
Sbjct: 432 PKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRV 491
Query: 373 KFDKKTIRCIFVGDDSRRKGW 435
KFD K+ RCIFVG KG+
Sbjct: 492 KFDNKSDRCIFVGYADGIKGY 512
Score = 29.6 bits (65), Expect(3) = 8e-14
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 12 KKIRCLRTDNGGECVTRVLK-----LPLRKQDKKTNVFPRTPQEVAKRMNRHLAETCRSM 176
+KI+ LR+D GGE +++ + +R+Q T + VA+R NR + + SM
Sbjct: 368 RKIKVLRSDQGGEYISKEFEKYCENAGIRRQ--LTAGYSTQQNGVAERKNRTINDMANSM 425
Query: 177 LMPK 188
L K
Sbjct: 426 LQDK 429
Score = 20.4 bits (41), Expect(3) = 8e-14
Identities = 5/13 (38%), Positives = 12/13 (92%)
Frame = +3
Query: 468 VSRNVVFDKASSW 506
+ R+V+FD++++W
Sbjct: 524 IIRDVIFDESATW 536
>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
Length = 1314
Score = 71.6 bits (174), Expect(3) = 1e-13
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +1
Query: 193 PPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRM 372
P +WAE + TA ++NR P + ++PF+ + +P + H +VF +CY V Q R+
Sbjct: 649 PKSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFACICYAQVPAQKRV 708
Query: 373 KFDKKTIRCIFVGDDSRRKGW 435
KFD K+ RCIFVG KG+
Sbjct: 709 KFDNKSNRCIFVGYADGIKGY 729
Score = 30.4 bits (67), Expect(3) = 1e-13
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 12 KKIRCLRTDNGGECVTRVLK-----LPLRKQDKKTNVFPRTPQEVAKRMNRHLAETCRSM 176
+KI+ LR+D GGE +++ + +R+Q T + VA+R NR + + SM
Sbjct: 585 RKIKVLRSDQGGEYISKEFEKYCENAGIRRQ--LTTGYSAQQNGVAERKNRTINDMANSM 642
Query: 177 LMPK 188
L K
Sbjct: 643 LQDK 646
Score = 21.2 bits (43), Expect(3) = 1e-13
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +3
Query: 468 VSRNVVFDKASSW 506
+SR+V FD++++W
Sbjct: 741 ISRDVFFDESATW 753
>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
gi|31429795|gb|AAP51797.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1350
Score = 70.5 bits (171), Expect(3) = 1e-13
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +1
Query: 193 PPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRM 372
P +WAE + TA ++NR P + ++PF+ + +P + H +VFG +CY V Q R+
Sbjct: 565 PKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRV 624
Query: 373 KFDKKTIRCIFVGDDSRRKGW 435
KFD K+ CIFVG KG+
Sbjct: 625 KFDNKSDWCIFVGYADGIKGY 645
Score = 29.6 bits (65), Expect(3) = 1e-13
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 12 KKIRCLRTDNGGECVTRVLK-----LPLRKQDKKTNVFPRTPQEVAKRMNRHLAETCRSM 176
+KI+ LR+D GGE +++ + +R+Q T + VA+R NR + + SM
Sbjct: 501 RKIKVLRSDQGGEYISKEFEKYCENAGIRRQ--LTAGYSAQQNGVAERKNRTINDMANSM 558
Query: 177 LMPK 188
L K
Sbjct: 559 LQDK 562
Score = 22.7 bits (47), Expect(3) = 1e-13
Identities = 6/13 (46%), Positives = 13/13 (100%)
Frame = +3
Query: 468 VSRNVVFDKASSW 506
+SR+V+FD++++W
Sbjct: 657 ISRDVIFDESATW 669
>emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera]
Length = 1252
Score = 58.2 bits (139), Expect(2) = 2e-13
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 193 PPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPT-VRHFKVFGFVCYMFVLDQLR 369
P +WA+ + TAA +INR P + +EF+ P +++W+ + H KVFG V Y+ + R
Sbjct: 368 PKNFWADAISTAAYLINRGPSIPMEFRLP-EEVWSGKEMKFSHLKVFGCVSYVHIDSDAR 426
Query: 370 MKFDKKTIRCIFVGDDSRRKGW 435
K D K+ C F+G + G+
Sbjct: 427 SKLDAKSKICFFIGYGDEKFGY 448
Score = 44.3 bits (103), Expect(2) = 2e-13
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +3
Query: 15 KIRCLRTDNGGECVT-RVLKLPLRKQDKKTNVFPRTPQE--VAKRMNRHLAETCRSM 176
KI+CLR+DNGGE + R K + + P TPQ+ VA+RMNR L E RSM
Sbjct: 305 KIKCLRSDNGGEYIDGRFSKYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSM 361
>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1136
Score = 72.8 bits (177), Expect(2) = 2e-13
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +1
Query: 193 PPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRM 372
P +WAE + TA ++NR P + ++PF+ + +P + H +VFG +CY V Q R+
Sbjct: 483 PKSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRV 542
Query: 373 KFDKKTIRCIFVG 411
KFD K+ RCIFVG
Sbjct: 543 KFDNKSDRCIFVG 555
Score = 29.6 bits (65), Expect(2) = 2e-13
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 12 KKIRCLRTDNGGECVTRVLK-----LPLRKQDKKTNVFPRTPQEVAKRMNRHLAETCRSM 176
+KI+ LR+D GGE +++ + +R+Q T + VA+R NR + + SM
Sbjct: 419 RKIKVLRSDQGGEYISKEFEKYCENAGIRRQ--LTAGYSAQQNGVAERKNRTINDMANSM 476
Query: 177 LMPK 188
L K
Sbjct: 477 LQDK 480
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 57.0 bits (136), Expect(2) = 3e-13
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 202 YWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPT-VRHFKVFGFVCYMFVLDQLRMKF 378
+WAE ++TA VINR P ++ K+P + MW +P VFG Y+ Q R K
Sbjct: 609 FWAEAVKTACYVINRSPSTTIDLKTPME-MWKGKPVDYSSLHVFGCPVYVMYNSQERTKL 667
Query: 379 DKKTIRCIFVGDDSRRKGWSVVIP 450
D K+ +CIF+G KG+ + P
Sbjct: 668 DPKSRKCIFLGYADNVKGYRLWDP 691
Score = 45.1 bits (105), Expect(2) = 3e-13
Identities = 31/60 (51%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +3
Query: 12 KKIRCLRTDNGGECVTRVLKLPLRKQDKKTNVF--PRTPQE--VAKRMNRHLAETCRSML 179
KKI+CLRTDNGGE V L KQ+ F TPQ+ VA+RMNR L E R+ML
Sbjct: 542 KKIKCLRTDNGGEYVDGEF-LAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAML 600
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 57.0 bits (136), Expect(2) = 3e-13
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 202 YWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPT-VRHFKVFGFVCYMFVLDQLRMKF 378
+WAE ++TA VINR P ++ K+P + MW +P VFG Y+ Q R K
Sbjct: 609 FWAEAVKTACYVINRSPSTAIDLKTPME-MWKGKPVDYSSLHVFGCPVYVMYNSQERTKL 667
Query: 379 DKKTIRCIFVGDDSRRKGWSVVIP 450
D K+ +CIF+G KG+ + P
Sbjct: 668 DPKSRKCIFLGYADNVKGYRLWDP 691
Score = 45.1 bits (105), Expect(2) = 3e-13
Identities = 31/60 (51%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +3
Query: 12 KKIRCLRTDNGGECVTRVLKLPLRKQDKKTNVF--PRTPQE--VAKRMNRHLAETCRSML 179
KKI+CLRTDNGGE V L KQ+ F TPQ+ VA+RMNR L E R+ML
Sbjct: 542 KKIKCLRTDNGGEYVDGEF-LAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAML 600
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 57.0 bits (136), Expect(2) = 4e-13
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 202 YWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPT-VRHFKVFGFVCYMFVLDQLRMKF 378
+WAE ++TA VINR P ++ K+P + MW +P VFG Y+ Q R K
Sbjct: 609 FWAEAVKTACYVINRSPSTAIDLKTPME-MWKGKPVDYSSLHVFGCPVYVMYNSQERTKL 667
Query: 379 DKKTIRCIFVGDDSRRKGWSVVIP 450
D K+ +CIF+G KG+ + P
Sbjct: 668 DPKSRKCIFLGYADNVKGYRLWDP 691
Score = 44.7 bits (104), Expect(2) = 4e-13
Identities = 30/60 (50%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +3
Query: 12 KKIRCLRTDNGGECVTRVLKLPLRKQDKKTNVF--PRTPQE--VAKRMNRHLAETCRSML 179
KKI+CLRTDNGGE + L KQ+ F TPQ+ VA+RMNR L E R+ML
Sbjct: 542 KKIKCLRTDNGGEYIDGEF-LAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAML 600
>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 63.9 bits (154), Expect(3) = 5e-13
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 199 EYWAERMRTAANVINRLPQVRLEFKSPFQKMWN-VRPTVRHFKVFGFVCYMFVLDQLRMK 375
++WAE + T+ + NRLP LE ++W+ +P+V H KVFG VCY+ + D+ R K
Sbjct: 643 KFWAEAIATSTYLQNRLPSKSLEKGVTPMEIWSGKKPSVDHLKVFGCVCYIHIPDEKRRK 702
Query: 376 FDKKTIRCIFVGDDSRRKGWSVVI 447
D K + IFVG + KG+ V +
Sbjct: 703 LDTKAKQGIFVGYSNESKGYRVFL 726
Score = 36.2 bits (82), Expect(3) = 5e-13
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 15 KIRCLRTDNGGECVTR-VLKLPLRKQDKKTNVFPRTPQE--VAKRMNRHLAETCRSMLMP 185
+I+ LRTD GGE ++R +KL P +PQ+ VA+R NR L E RSM+
Sbjct: 578 RIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRTLVEMARSMIEE 637
Query: 186 K 188
K
Sbjct: 638 K 638
Score = 20.8 bits (42), Expect(3) = 5e-13
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 468 VSRNVVFDKASSWWFVEK 521
VS++V FD+ +W EK
Sbjct: 734 VSKDVTFDEKKTWSHDEK 751
>emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
Length = 845
Score = 65.9 bits (159), Expect(2) = 5e-13
Identities = 27/81 (33%), Positives = 51/81 (62%)
Frame = +1
Query: 193 PPEYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRM 372
P +W E ++TA ++INRLP L +SP+ +++ +P+ H ++FG VC++ + R
Sbjct: 654 PSMFWVEALKTATHLINRLPSQVLHMESPYFRLFAKQPSYDHLRIFGCVCFVHLPPHERH 713
Query: 373 KFDKKTIRCIFVGDDSRRKGW 435
K +++RC F+G + +KG+
Sbjct: 714 KLSAQSVRCAFLGYNMCQKGF 734
Score = 35.4 bits (80), Expect(2) = 5e-13
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +3
Query: 18 IRCLRTDNGGECVTRVLKLPL-RKQDKKTNVFPRTPQE--VAKRMNRHLAETCRSMLM 182
I+ LRTD+GGE ++ + L K P TPQ+ VA+R NRHL + R++L+
Sbjct: 592 IKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPSTPQQNGVAERKNRHLLDVVRTLLL 649
>emb|CCA17441.1| putative polyprotein [Albugo laibachii Nc14]
Length = 595
Score = 67.0 bits (162), Expect(2) = 5e-13
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = +1
Query: 199 EYWAERMRTAANVINRLPQVRLEFKSPFQKMWNVRPTVRHFKVFGFVCYMFVLDQLRMKF 378
++WAE M TA V NR+P +FK+ F+ + +P+V HFKVFG Y + R KF
Sbjct: 251 KWWAEAMNTAVYVTNRVPCAANQFKTSFEVCFGRKPSVAHFKVFGAQGYAHIDRSKRSKF 310
Query: 379 DKKTIRCIFVGDDSRRKGWSV 441
D+K +C+F G KG+ V
Sbjct: 311 DRKAYKCMFPGYFENFKGYRV 331
Score = 34.3 bits (77), Expect(2) = 5e-13
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 3 RYWKKIRCLRTDNGGECVTRVLKLPLRKQ----DKKTNVFPRTPQEVAKRMNRHLAETCR 170
++ KKI+C+R+ NGGE + LRK + T +P A+RMNR L E
Sbjct: 182 QFGKKIKCMRSHNGGEYINDKF-ANLRKNYGIIHQTTVPYPPQQNGHAERMNRTLTERAS 240
Query: 171 SML 179
ML
Sbjct: 241 CML 243