BLASTX nr result
ID: Catharanthus23_contig00017975
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00017975
(277 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004248028.1| PREDICTED: probable ATP-dependent RNA helica... 67 6e-18
ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica... 62 2e-17
emb|CBI30650.3| unnamed protein product [Vitis vinifera] 62 2e-17
ref|XP_006358785.1| PREDICTED: probable ATP-dependent RNA helica... 65 2e-17
ref|XP_004300266.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP... 59 2e-17
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica... 62 1e-16
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu... 60 2e-16
gb|EMJ15734.1| hypothetical protein PRUPE_ppa002300mg [Prunus pe... 59 2e-16
gb|ESW20074.1| hypothetical protein PHAVU_006G179000g [Phaseolus... 62 5e-16
ref|XP_006852514.1| hypothetical protein AMTR_s00021p00166450 [A... 55 1e-15
gb|EXB88532.1| putative ATP-dependent RNA helicase DHX35 [Morus ... 59 3e-15
gb|EXB88539.1| hypothetical protein L484_008858 [Morus notabilis] 56 3e-15
gb|EOY28088.1| RNA helicase family protein isoform 1 [Theobroma ... 59 4e-15
ref|XP_006467687.1| PREDICTED: probable ATP-dependent RNA helica... 57 4e-15
gb|EOY28092.1| RNA helicase family protein isoform 5, partial [T... 59 4e-15
ref|XP_006449459.1| hypothetical protein CICLE_v10014624mg [Citr... 57 4e-15
gb|EOY28094.1| ATP-dependent RNA helicase DDX35 isoform 7, parti... 59 4e-15
gb|EOY28091.1| RNA helicase family protein isoform 4 [Theobroma ... 59 4e-15
ref|XP_006467688.1| PREDICTED: probable ATP-dependent RNA helica... 57 4e-15
gb|EOY28089.1| RNA helicase family protein isoform 2, partial [T... 59 4e-15
>ref|XP_004248028.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Solanum
lycopersicum]
Length = 690
Score = 66.6 bits (161), Expect(2) = 6e-18
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = -1
Query: 271 EHGPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
E GP E AILSVEGRGFNVE+FY++DP DY+Q VSTV+SI D+
Sbjct: 222 EQGPRKEPAILSVEGRGFNVEIFYVDDPVSDYVQSAVSTVMSIHDQ 267
Score = 49.7 bits (117), Expect(2) = 6e-18
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = -2
Query: 132 HIQEPMGDILVFLMGQDDIDAAGQLLSEEAHNS 34
H QE MGDILVFL GQDDID A QLL+EEA +S
Sbjct: 265 HDQERMGDILVFLTGQDDIDTAIQLLTEEAQSS 297
>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
vinifera]
Length = 695
Score = 62.0 bits (149), Expect(2) = 2e-17
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = -1
Query: 271 EHGPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
E GP T+ AILSVEGRGFNV++ ++E+P DYLQ VSTVLSI ++
Sbjct: 226 ESGPRTDPAILSVEGRGFNVQIHHIEEPVPDYLQAAVSTVLSIHEQ 271
Score = 52.8 bits (125), Expect(2) = 2e-17
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -2
Query: 132 HIQEPMGDILVFLMGQDDIDAAGQLLSEEAHNS 34
H QEPMGDILVFL G++DIDAA QLL+EEA N+
Sbjct: 269 HEQEPMGDILVFLTGENDIDAAVQLLNEEAQNN 301
>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 62.0 bits (149), Expect(2) = 2e-17
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = -1
Query: 271 EHGPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
E GP T+ AILSVEGRGFNV++ ++E+P DYLQ VSTVLSI ++
Sbjct: 225 ESGPRTDPAILSVEGRGFNVQIHHIEEPVPDYLQAAVSTVLSIHEQ 270
Score = 52.8 bits (125), Expect(2) = 2e-17
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -2
Query: 132 HIQEPMGDILVFLMGQDDIDAAGQLLSEEAHNS 34
H QEPMGDILVFL G++DIDAA QLL+EEA N+
Sbjct: 268 HEQEPMGDILVFLTGENDIDAAVQLLNEEAQNN 300
>ref|XP_006358785.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Solanum
tuberosum]
Length = 690
Score = 65.1 bits (157), Expect(2) = 2e-17
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = -1
Query: 271 EHGPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
E GP E AILSVEGRGFNVE+FY++DP DY++ VSTV+SI D+
Sbjct: 222 EQGPTKEPAILSVEGRGFNVEIFYVDDPVSDYVRSAVSTVMSIHDQ 267
Score = 49.7 bits (117), Expect(2) = 2e-17
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = -2
Query: 132 HIQEPMGDILVFLMGQDDIDAAGQLLSEEAHNS 34
H QE MGDILVFL GQDDID A QLL+EEA +S
Sbjct: 265 HDQERMGDILVFLTGQDDIDTAIQLLTEEAQSS 297
>ref|XP_004300266.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX35-like [Fragaria vesca subsp. vesca]
Length = 691
Score = 58.9 bits (141), Expect(2) = 2e-17
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = -1
Query: 271 EHGPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
E GP E A+LSVEGRGFNV++ Y+E+P DYL+ VSTVL I D+
Sbjct: 221 ELGPIMEPAVLSVEGRGFNVQIHYVEEPVADYLRAAVSTVLLIHDQ 266
Score = 55.5 bits (132), Expect(2) = 2e-17
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHN 37
L+ H QEPMGDILVFL GQDDIDAA QL++EEA N
Sbjct: 261 LLIHDQEPMGDILVFLTGQDDIDAAVQLITEEAQN 295
>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
probable ATP-dependent RNA helicase DHX35-like [Cucumis
sativus]
Length = 696
Score = 61.6 bits (148), Expect(2) = 1e-16
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = -1
Query: 262 PGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
P E AILSVEGRGFNV++FYLE+P DY+Q VSTVLSI ++
Sbjct: 230 PKVEPAILSVEGRGFNVQIFYLEEPVSDYVQSAVSTVLSIHEQ 272
Score = 50.1 bits (118), Expect(2) = 1e-16
Identities = 25/32 (78%), Positives = 25/32 (78%)
Frame = -2
Query: 132 HIQEPMGDILVFLMGQDDIDAAGQLLSEEAHN 37
H QEP GDILVFL GQDDIDAA QLL EE N
Sbjct: 270 HEQEPPGDILVFLTGQDDIDAAVQLLIEEGQN 301
>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 696
Score = 60.5 bits (145), Expect(2) = 2e-16
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = -1
Query: 271 EHGPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
E GP E AILSVEGRGFNV++ Y+E+ DY++ TVSTVLSI D+
Sbjct: 227 ELGPRKEPAILSVEGRGFNVQILYVEEAVADYVRATVSTVLSIHDQ 272
Score = 50.8 bits (120), Expect(2) = 2e-16
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -2
Query: 132 HIQEPMGDILVFLMGQDDIDAAGQLLSEEA 43
H QEP GDILVFL GQDDIDAA QLL+EEA
Sbjct: 270 HDQEPAGDILVFLTGQDDIDAAVQLLTEEA 299
>gb|EMJ15734.1| hypothetical protein PRUPE_ppa002300mg [Prunus persica]
Length = 690
Score = 59.3 bits (142), Expect(2) = 2e-16
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -1
Query: 271 EHGPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
E GP E+A+LSVEGRGFNV++ Y+E+P DYL+ VSTVL I ++
Sbjct: 220 ELGPNMESAVLSVEGRGFNVQIHYVEEPVPDYLRAAVSTVLLIHEK 265
Score = 51.6 bits (122), Expect(2) = 2e-16
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHN 37
L+ H +EPMGDILVFL GQDDIDAA QL++EE N
Sbjct: 260 LLIHEKEPMGDILVFLTGQDDIDAAVQLITEEDQN 294
>gb|ESW20074.1| hypothetical protein PHAVU_006G179000g [Phaseolus vulgaris]
Length = 699
Score = 61.6 bits (148), Expect(2) = 5e-16
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -1
Query: 277 NMEHGPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
N +HGP E AILSVEGRGFNV++ Y E+P DY+Q VST L I R
Sbjct: 227 NKDHGPQVEPAILSVEGRGFNVQINYAEEPVQDYVQAAVSTTLLIHQR 274
Score = 48.1 bits (113), Expect(2) = 5e-16
Identities = 22/36 (61%), Positives = 29/36 (80%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHNS 34
L+ H +EP+GD+LVFL GQDDIDAA QLL++E +
Sbjct: 269 LLIHQREPVGDVLVFLTGQDDIDAAVQLLTDEVQTT 304
>ref|XP_006852514.1| hypothetical protein AMTR_s00021p00166450 [Amborella trichopoda]
gi|548856125|gb|ERN13981.1| hypothetical protein
AMTR_s00021p00166450 [Amborella trichopoda]
Length = 691
Score = 55.1 bits (131), Expect(2) = 1e-15
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = -1
Query: 271 EHGPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSI 143
+ GP E AILSVEGRG++V++ +LE+P +YLQ VSTVL I
Sbjct: 229 DFGPSREPAILSVEGRGYDVQIHFLEEPVSNYLQAAVSTVLDI 271
Score = 53.1 bits (126), Expect(2) = 1e-15
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 132 HIQEPMGDILVFLMGQDDIDAAGQLLSEEAHN 37
H QEPMGD+LVFL GQDDIDAA Q+L++EA N
Sbjct: 272 HNQEPMGDVLVFLTGQDDIDAAVQMLTDEAQN 303
>gb|EXB88532.1| putative ATP-dependent RNA helicase DHX35 [Morus notabilis]
Length = 696
Score = 59.3 bits (142), Expect(2) = 3e-15
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = -1
Query: 265 GPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
GP + AILSVEGRGFNV++ Y+E+P +Y+Q VSTVLSI D+
Sbjct: 228 GPRMDPAILSVEGRGFNVQIHYMEEPVSNYVQAAVSTVLSIHDK 271
Score = 47.8 bits (112), Expect(2) = 3e-15
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -2
Query: 132 HIQEPMGDILVFLMGQDDIDAAGQLLSEE 46
H +EPMGDILVFL GQDDIDA Q+L+EE
Sbjct: 269 HDKEPMGDILVFLTGQDDIDAVVQMLNEE 297
>gb|EXB88539.1| hypothetical protein L484_008858 [Morus notabilis]
Length = 299
Score = 55.8 bits (133), Expect(2) = 3e-15
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -1
Query: 265 GPGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSI 143
GP + AILSVEGRGFNV + Y+E+P +Y+Q VSTVLSI
Sbjct: 176 GPRMDPAILSVEGRGFNVHIHYVEEPVSNYVQAAVSTVLSI 216
Score = 51.2 bits (121), Expect(2) = 3e-15
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -2
Query: 132 HIQEPMGDILVFLMGQDDIDAAGQLLSEEAHN 37
H QEPMGDILVFL GQDDIDAA Q+L+EE +
Sbjct: 217 HNQEPMGDILVFLTGQDDIDAAVQMLNEEVQS 248
>gb|EOY28088.1| RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 697
Score = 58.5 bits (140), Expect(2) = 4e-15
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -1
Query: 262 PGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
P E AILSVEGRGFNV++ Y+EDP DY+Q VSTVL I D+
Sbjct: 230 PRLEPAILSVEGRGFNVQIHYVEDPVQDYVQAAVSTVLLIHDQ 272
Score = 48.1 bits (113), Expect(2) = 4e-15
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHN 37
L+ H QEP GDILVFL GQDDID A ++L+EEA +
Sbjct: 267 LLIHDQEPAGDILVFLTGQDDIDVAVKMLTEEARS 301
>ref|XP_006467687.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like isoform
X1 [Citrus sinensis]
Length = 697
Score = 57.4 bits (137), Expect(2) = 4e-15
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -1
Query: 262 PGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
P E AILSVEGRGFNV++ Y+E+P DY+Q VSTVL I D+
Sbjct: 231 PRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
Score = 49.3 bits (116), Expect(2) = 4e-15
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHNS 34
L+ H +EP GDILVFL GQDDIDA QLL+EEA S
Sbjct: 268 LLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTS 303
>gb|EOY28092.1| RNA helicase family protein isoform 5, partial [Theobroma cacao]
Length = 623
Score = 58.5 bits (140), Expect(2) = 4e-15
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -1
Query: 262 PGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
P E AILSVEGRGFNV++ Y+EDP DY+Q VSTVL I D+
Sbjct: 226 PRLEPAILSVEGRGFNVQIHYVEDPVQDYVQAAVSTVLLIHDQ 268
Score = 48.1 bits (113), Expect(2) = 4e-15
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHN 37
L+ H QEP GDILVFL GQDDID A ++L+EEA +
Sbjct: 263 LLIHDQEPAGDILVFLTGQDDIDVAVKMLTEEARS 297
>ref|XP_006449459.1| hypothetical protein CICLE_v10014624mg [Citrus clementina]
gi|557552070|gb|ESR62699.1| hypothetical protein
CICLE_v10014624mg [Citrus clementina]
Length = 618
Score = 57.4 bits (137), Expect(2) = 4e-15
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -1
Query: 262 PGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
P E AILSVEGRGFNV++ Y+E+P DY+Q VSTVL I D+
Sbjct: 231 PRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
Score = 49.3 bits (116), Expect(2) = 4e-15
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHNS 34
L+ H +EP GDILVFL GQDDIDA QLL+EEA S
Sbjct: 268 LLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTS 303
>gb|EOY28094.1| ATP-dependent RNA helicase DDX35 isoform 7, partial [Theobroma
cacao]
Length = 599
Score = 58.5 bits (140), Expect(2) = 4e-15
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -1
Query: 262 PGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
P E AILSVEGRGFNV++ Y+EDP DY+Q VSTVL I D+
Sbjct: 226 PRLEPAILSVEGRGFNVQIHYVEDPVQDYVQAAVSTVLLIHDQ 268
Score = 48.1 bits (113), Expect(2) = 4e-15
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHN 37
L+ H QEP GDILVFL GQDDID A ++L+EEA +
Sbjct: 263 LLIHDQEPAGDILVFLTGQDDIDVAVKMLTEEARS 297
>gb|EOY28091.1| RNA helicase family protein isoform 4 [Theobroma cacao]
Length = 575
Score = 58.5 bits (140), Expect(2) = 4e-15
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -1
Query: 262 PGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
P E AILSVEGRGFNV++ Y+EDP DY+Q VSTVL I D+
Sbjct: 230 PRLEPAILSVEGRGFNVQIHYVEDPVQDYVQAAVSTVLLIHDQ 272
Score = 48.1 bits (113), Expect(2) = 4e-15
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHN 37
L+ H QEP GDILVFL GQDDID A ++L+EEA +
Sbjct: 267 LLIHDQEPAGDILVFLTGQDDIDVAVKMLTEEARS 301
>ref|XP_006467688.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like isoform
X2 [Citrus sinensis]
Length = 560
Score = 57.4 bits (137), Expect(2) = 4e-15
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -1
Query: 262 PGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
P E AILSVEGRGFNV++ Y+E+P DY+Q VSTVL I D+
Sbjct: 94 PRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDK 136
Score = 49.3 bits (116), Expect(2) = 4e-15
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHNS 34
L+ H +EP GDILVFL GQDDIDA QLL+EEA S
Sbjct: 131 LLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTS 166
>gb|EOY28089.1| RNA helicase family protein isoform 2, partial [Theobroma cacao]
Length = 521
Score = 58.5 bits (140), Expect(2) = 4e-15
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -1
Query: 262 PGTEAAILSVEGRGFNVEVFYLEDPALDYLQITVSTVLSIPDR 134
P E AILSVEGRGFNV++ Y+EDP DY+Q VSTVL I D+
Sbjct: 94 PRLEPAILSVEGRGFNVQIHYVEDPVQDYVQAAVSTVLLIHDQ 136
Score = 48.1 bits (113), Expect(2) = 4e-15
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2
Query: 141 LIGHIQEPMGDILVFLMGQDDIDAAGQLLSEEAHN 37
L+ H QEP GDILVFL GQDDID A ++L+EEA +
Sbjct: 131 LLIHDQEPAGDILVFLTGQDDIDVAVKMLTEEARS 165