BLASTX nr result
ID: Catharanthus23_contig00017966
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00017966
(824 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 257 1e-70
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 256 9e-70
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 251 1e-68
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 249 1e-68
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 250 3e-68
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 247 1e-67
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 246 2e-67
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 244 5e-67
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 244 5e-67
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 243 1e-66
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 242 2e-66
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 242 2e-66
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 242 2e-66
emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera] 241 4e-66
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera] 241 6e-66
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 241 6e-66
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 244 7e-66
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 241 1e-65
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 240 4e-65
emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera] 238 4e-65
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 257 bits (657), Expect(2) = 1e-70
Identities = 131/254 (51%), Positives = 178/254 (70%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKEN+ C LK S +GLKQSPRQWYK FDSFML F +SNYDSC+Y
Sbjct: 1150 YMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKV 1209
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
+ SAIYLLLYV+DM IA K K++I LK+QL EF +KDLG+ +IL M ITR R +
Sbjct: 1210 VD-GSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSF 1268
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
L+LSQK ++K++ +F+MH KPV TPLA+HF+LS CP+++ M+ P A+G
Sbjct: 1269 KLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVG 1328
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ +RPD++ ++S++SR+M+N G++H A++W+ YL T+ L D
Sbjct: 1329 SLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSRD--G 1386
Query: 50 LIGYVNSDFAGDKD 9
L+GYV+SDFAGD D
Sbjct: 1387 LVGYVDSDFAGDLD 1400
Score = 37.0 bits (84), Expect(2) = 1e-70
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQ+DVKTAFLHG LEE IY
Sbjct: 1132 EQMDVKTAFLHGELEEDIY 1150
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 256 bits (654), Expect(2) = 9e-70
Identities = 130/256 (50%), Positives = 177/256 (69%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKEN+ C LK S +GLKQSPRQWYK FDSFML F SNYDSC+Y
Sbjct: 915 YMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYLKV 974
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
+ S IYLLLYV+DM IA K K++I+ LK+QL EF +KDLG+ +IL M ITR+R +
Sbjct: 975 VD-GSVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSG 1033
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
L+LSQK ++K++ +F+MH KPV TPLA+HF+LS CP ++ M+ P A+G
Sbjct: 1034 KLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPLSDYDIEYMSRVPYSSAVG 1093
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ RPD++ ++S+++R+M+N G++H A++W+ YL T+ L D
Sbjct: 1094 SLMYAMVCCRPDLSHALSVVNRYMANPGKEHWKAVQWIFRYLRGTSSACLQFERSRD--G 1151
Query: 50 LIGYVNSDFAGDKDGR 3
L+GYV+SDFAGD D R
Sbjct: 1152 LVGYVDSDFAGDLDRR 1167
Score = 35.0 bits (79), Expect(2) = 9e-70
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQ++VKTAFLHG LEE IY
Sbjct: 897 EQMNVKTAFLHGELEEDIY 915
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 251 bits (640), Expect(2) = 1e-68
Identities = 130/256 (50%), Positives = 177/256 (69%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKEN+ C LK S +GLKQSPRQWYK FDSFML F +SNYDSC+Y
Sbjct: 852 YMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKV 911
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
+ SAIYLLLYV+DM IA K K++I LK+QL EF +KDLG+ +IL M ITR+R +
Sbjct: 912 VD-GSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSG 970
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
L+LSQK ++K++ +F+MH K V T LA+HF+LS CP++ M+ P A+
Sbjct: 971 KLYLSQKCYIEKVLHRFNMHDAKLVSTLLAAHFRLSSDLCPQSAYDIEYMSRVPYSSAVS 1030
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ +RPD++ ++S++SR+M+N G++H A++W+ YL T+ L SD
Sbjct: 1031 SLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSD--G 1088
Query: 50 LIGYVNSDFAGDKDGR 3
L+GYV+SDFAGD D R
Sbjct: 1089 LVGYVDSDFAGDLDRR 1104
Score = 37.0 bits (84), Expect(2) = 1e-68
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQ+DVKTAFLHG LEE IY
Sbjct: 834 EQMDVKTAFLHGELEEDIY 852
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 249 bits (637), Expect(2) = 1e-68
Identities = 131/256 (51%), Positives = 172/256 (67%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKE+ C LK S +GLKQSPRQWYK FDSFML GF +S +DSC+Y
Sbjct: 933 YMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKF 992
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
N S IYLLLYV+D+ IA K K +I LK QL EF++KDLG+ +IL M ITRD+ +
Sbjct: 993 VN-GSPIYLLLYVDDILIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDKNSG 1051
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
LFLSQ+ ++K++ F+MH KPV TP+A HFKLS C T+ M+ P A+G
Sbjct: 1052 LLFLSQQSYIKKVLQCFNMHDAKPVSTPIAPHFKLSALQCANTDEDVEYMSRVPYSSAVG 1111
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ +RPD++ ++SL+SR+M+N G++H A++W+ YL T D L D
Sbjct: 1112 SLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAVQWIFRYLRGTADACLKFGR--TDKG 1169
Query: 50 LIGYVNSDFAGDKDGR 3
LIGYV+SDFA D D R
Sbjct: 1170 LIGYVDSDFAADLDKR 1185
Score = 37.7 bits (86), Expect(2) = 1e-68
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG LEE IY
Sbjct: 915 EQLDVKTAFLHGELEEEIY 933
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 250 bits (638), Expect(2) = 3e-68
Identities = 131/256 (51%), Positives = 172/256 (67%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKE+ C LK S +GLKQSPRQWYK FDSFML GF +S +DSC+Y
Sbjct: 933 YMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKF 992
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
N S IYLLLYV+DM IA K K +I LK QL EF++KDLG+ +IL M ITRDR +
Sbjct: 993 VN-GSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSG 1051
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
LFLSQ+ ++K++ +F+MH KPV TP+A HFKLS C T+ M+ P A+G
Sbjct: 1052 LLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAVG 1111
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ + PD++ ++SL+SR+M+N G++H A++W+ YL T D L D
Sbjct: 1112 SLMYAMVCSWPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGR--IDKG 1169
Query: 50 LIGYVNSDFAGDKDGR 3
L+GYV+SDFA D D R
Sbjct: 1170 LVGYVDSDFAADLDKR 1185
Score = 36.2 bits (82), Expect(2) = 3e-68
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKT FLHG LEE IY
Sbjct: 915 EQLDVKTTFLHGELEEEIY 933
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 247 bits (631), Expect(2) = 1e-67
Identities = 126/256 (49%), Positives = 176/256 (68%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKEN+ LK S +GLKQSPRQWYK FDSFM F +SNYDSC+Y
Sbjct: 822 YMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYLKV 881
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
+ S+IYLLLYV+DM IA K K++I+ LK+QL EF +KDLG+ +IL M ITR+R +
Sbjct: 882 VD-GSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSG 940
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
L+LSQK ++K++ +F+MH KPV TPLA+HF+LS CP+++ M+ P +G
Sbjct: 941 KLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYLSVVG 1000
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ +R D++ ++S++SR+M+N G++H ++W+ YL T+ L D
Sbjct: 1001 SLMYAMVCSRLDLSHALSVVSRYMANPGKEHWKVVQWIFKYLRGTSSACLQFGRSRD--G 1058
Query: 50 LIGYVNSDFAGDKDGR 3
L+GYV+SDFAGD D R
Sbjct: 1059 LVGYVDSDFAGDLDRR 1074
Score = 37.0 bits (84), Expect(2) = 1e-67
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQ+DVKTAFLHG LEE IY
Sbjct: 804 EQMDVKTAFLHGELEEDIY 822
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 246 bits (627), Expect(2) = 2e-67
Identities = 131/256 (51%), Positives = 170/256 (66%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKE C LK S +GLKQSPRQW K FDSFML F +S YDSC+Y
Sbjct: 946 YMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH 1005
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
N S IYLLLYV+DM IA K K +I LK L EF++KDLGS +IL M I+RDR +
Sbjct: 1006 VN-GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSG 1064
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
LFLSQ ++K++ +F+M K V TP+A HFKLS CP T+++ M+ P A+G
Sbjct: 1065 LLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVG 1124
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ +RPD+++++SL+SR+MSN G++H AL+W+ YL TT L D
Sbjct: 1125 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTTYSCLKFGR--TDKG 1182
Query: 50 LIGYVNSDFAGDKDGR 3
LIGYV+SD+A D D R
Sbjct: 1183 LIGYVDSDYAADLDRR 1198
Score = 37.7 bits (86), Expect(2) = 2e-67
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG LEE IY
Sbjct: 928 EQLDVKTAFLHGELEEDIY 946
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 244 bits (624), Expect(2) = 5e-67
Identities = 127/256 (49%), Positives = 176/256 (68%), Gaps = 1/256 (0%)
Frame = -1
Query: 767 MRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSRN 588
M QP GFE K KE+ CLL S +GLKQSPRQWY+ FD FM+ G+ +S YDSC+YF +
Sbjct: 942 MAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDSCVYFGGS 1001
Query: 587 NVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTNDS 408
+ YLLLYV+DM IA K+K++I+ LK+ LK EF +KDLG+ RIL M I RDR+ +
Sbjct: 1002 DQGGVAYLLLYVDDMLIASKYKSEIERLKNLLKAEFEMKDLGNAKRILGMDIIRDRSAGT 1061
Query: 407 LFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIGS 228
LFLSQ ++K++ +F M CKPV TPL FKLS T + ES+ M FP A+GS
Sbjct: 1062 LFLSQGKYIKKVLERFEMQDCKPVQTPLGPQFKLSAATTSEDESQ---MNEFPYAQAVGS 1118
Query: 227 IMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYL-NRTTDRVLHCHNWSDDFD 51
+MY+M+ TR DIA+++S++SR++S G+ H A+KW++ YL +T +L+ SD +
Sbjct: 1119 LMYAMVCTRSDIAYAVSVVSRYLSCPGKVHWNAVKWIMRYLKGSSTCGLLYGKTKSDKIE 1178
Query: 50 LIGYVNSDFAGDKDGR 3
++G+V+SDFAGD D R
Sbjct: 1179 VMGFVDSDFAGDLDRR 1194
Score = 37.4 bits (85), Expect(2) = 5e-67
Identities = 19/26 (73%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETI-YASTSGF 748
EQ+DVKTAFLHGNLEE I A GF
Sbjct: 923 EQMDVKTAFLHGNLEEQILMAQPEGF 948
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 244 bits (623), Expect(2) = 5e-67
Identities = 125/256 (48%), Positives = 172/256 (67%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF+V GKEN C LK S +GLKQSPRQWYK FDS+M+K+G+ +S+YD C+Y++R
Sbjct: 918 YMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNR 977
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
N DS IYL+LYV+DM IA K K I LK L EF +KDLG+ +IL M I RDR
Sbjct: 978 LNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERR 1037
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
LFLSQ+ +QK++++F M KP+ TP A++ L+ P++E +K M+ P A+G
Sbjct: 1038 KLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVG 1097
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ TRPD+A ++S++SRFM GR+H A+K + YL T+D L +
Sbjct: 1098 SLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGL-IYGGDTQCL 1156
Query: 50 LIGYVNSDFAGDKDGR 3
+ GY +SD+AGD D R
Sbjct: 1157 VTGYSDSDYAGDVDTR 1172
Score = 37.7 bits (86), Expect(2) = 5e-67
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG LEE IY
Sbjct: 900 EQLDVKTAFLHGELEEEIY 918
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 243 bits (619), Expect(2) = 1e-66
Identities = 129/256 (50%), Positives = 169/256 (66%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKE C LK S +GLKQSPRQW K FDSFML F +S YDSC+Y
Sbjct: 944 YMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH 1003
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
N S IYLLLYV+DM IA K K +I LK L EF++KDLGS +IL M I+RDR +
Sbjct: 1004 VN-GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSG 1062
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
LFLSQ ++K++ +F+M K V TP+A HFKLS CP T+++ M+ P A+G
Sbjct: 1063 LLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVG 1122
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ +RPD+++++SL+SR+MSN G++H ++W+ YL TT L D
Sbjct: 1123 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRGTTYSCLKFGR--TDKG 1180
Query: 50 LIGYVNSDFAGDKDGR 3
LIGYV+SD+A D D R
Sbjct: 1181 LIGYVDSDYAADLDRR 1196
Score = 37.7 bits (86), Expect(2) = 1e-66
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG LEE IY
Sbjct: 926 EQLDVKTAFLHGELEEDIY 944
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 242 bits (618), Expect(2) = 2e-66
Identities = 129/256 (50%), Positives = 169/256 (66%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKE C LK S +GLKQSPRQW K FDSFML F +S YDSC+Y
Sbjct: 944 YMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH 1003
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
N S IYLLLYV+DM IA K K +I LK L EF++KDLGS +IL M I+RDR +
Sbjct: 1004 VN-GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSG 1062
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
LFLSQ ++K++ +F+M K V TP+A HFKLS CP +++ M+ P A+G
Sbjct: 1063 LLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVG 1122
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ +RPD+++++SL+SR+MSN G++H A++W+ YL TT L D
Sbjct: 1123 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGR--TDKG 1180
Query: 50 LIGYVNSDFAGDKDGR 3
LIGYV+SD+A D D R
Sbjct: 1181 LIGYVDSDYAADLDRR 1196
Score = 37.7 bits (86), Expect(2) = 2e-66
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG LEE IY
Sbjct: 926 EQLDVKTAFLHGELEEDIY 944
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 242 bits (618), Expect(2) = 2e-66
Identities = 129/256 (50%), Positives = 169/256 (66%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKE C LK S +GLKQSPRQW K FDSFML F +S YDSC+Y
Sbjct: 944 YMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH 1003
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
N S IYLLLYV+DM IA K K +I LK L EF++KDLGS +IL M I+RDR +
Sbjct: 1004 VN-GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSG 1062
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
LFLSQ ++K++ +F+M K V TP+A HFKLS CP +++ M+ P A+G
Sbjct: 1063 LLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVG 1122
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ +RPD+++++SL+SR+MSN G++H A++W+ YL TT L D
Sbjct: 1123 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGR--TDKG 1180
Query: 50 LIGYVNSDFAGDKDGR 3
LIGYV+SD+A D D R
Sbjct: 1181 LIGYVDSDYAADLDRR 1196
Score = 37.7 bits (86), Expect(2) = 2e-66
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG LEE IY
Sbjct: 926 EQLDVKTAFLHGELEEDIY 944
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 242 bits (617), Expect(2) = 2e-66
Identities = 126/256 (49%), Positives = 168/256 (65%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GFEV GK++M C L S +GLKQ+PRQWY FDSFM +LK+ D C+YF R
Sbjct: 937 YMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKR 996
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
+ ++ I LLLYV+DM I K K I LK L F++KDLG +IL M I R+RT+
Sbjct: 997 FSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSR 1056
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
L+LSQ+ +++++ +F+M KPV TPLA H KLS K CP T +K +MA P A+G
Sbjct: 1057 KLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVG 1116
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ TRPDIA ++ ++SRF+ N G++H A+KW+L YL TT L C SD
Sbjct: 1117 SLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCL-CFGGSDPI- 1174
Query: 50 LIGYVNSDFAGDKDGR 3
L GY ++D AGD D R
Sbjct: 1175 LKGYTDADMAGDIDNR 1190
Score = 38.1 bits (87), Expect(2) = 2e-66
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG+LEE IY
Sbjct: 919 EQLDVKTAFLHGDLEEEIY 937
>emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]
Length = 1186
Score = 241 bits (616), Expect(2) = 4e-66
Identities = 128/256 (50%), Positives = 174/256 (67%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V+G+EN+ C L+ S +GLKQ+PRQWYK FD+FM ++GF + D C YF
Sbjct: 589 YMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKS 648
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
+ +S I LLLYV+DM IA KI++LK QL +F +KDLG+ +IL M I RD+ N
Sbjct: 649 FD-NSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANS 707
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
+L LSQ ++K++S+F+M+ KPV TPL SHFKLS + PKTE ++ M+ P AIG
Sbjct: 708 TLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIG 767
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ TRPDIA ++ ++SRFMS G+ H A+KW+L YL + D L C +
Sbjct: 768 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCL-CFTGA-SLK 825
Query: 50 LIGYVNSDFAGDKDGR 3
L GYV++DFAGD D R
Sbjct: 826 LQGYVDADFAGDIDSR 841
Score = 37.4 bits (85), Expect(2) = 4e-66
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG+LEE +Y
Sbjct: 571 EQLDVKTAFLHGDLEEDLY 589
>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
Length = 1286
Score = 241 bits (615), Expect(2) = 6e-66
Identities = 128/256 (50%), Positives = 173/256 (67%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V+G+EN+ C L+ S +GLKQ+PRQWYK FD+FM ++GF + D C YF
Sbjct: 897 YMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKS 956
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
+ +S I LLLYV+DM IA KI++LK QL +F +KDLG+ +IL M I RD+ N
Sbjct: 957 FD-NSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANG 1015
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
+L LSQ ++K++S+F+M+ KPV TPL SHFKLS + PKTE K+ M+ P AIG
Sbjct: 1016 TLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEKRDHMSKVPYASAIG 1075
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ TRPDIA ++ ++SRFMS G+ H +KW+L YL + D L C +
Sbjct: 1076 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEVVKWILRYLKGSLDTCL-CFTGA-SLK 1133
Query: 50 LIGYVNSDFAGDKDGR 3
L GYV++DFAGD D R
Sbjct: 1134 LQGYVDADFAGDIDSR 1149
Score = 37.4 bits (85), Expect(2) = 6e-66
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG+LEE +Y
Sbjct: 879 EQLDVKTAFLHGDLEEDLY 897
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 241 bits (614), Expect(2) = 6e-66
Identities = 128/256 (50%), Positives = 170/256 (66%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKE+ C LK S +GLKQSPRQWYK FDSFML GF +S +DSC+Y
Sbjct: 786 YMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKF 845
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
NV S IYLLLYV+DM IA K K +I LK QL EF++KDL + +IL M ITRDR +
Sbjct: 846 VNV-SPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLDAAKKILGMEITRDRNSG 904
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
LFLSQ+ ++K++ +F+MH KPV T +A HFKLS C T+ M+ P +G
Sbjct: 905 WLFLSQQSYIKKVLQRFNMHDTKPVSTHIAPHFKLSALQCASTDEDVEYMSRVPYSSVVG 964
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ +R D++ ++SL+SR+M+N G++H A++W+ YL T + L +
Sbjct: 965 SLMYAMVCSRLDLSHAMSLVSRYMANPGKEHWKAIQWIFRYLRDTANACLKFGRTNK--G 1022
Query: 50 LIGYVNSDFAGDKDGR 3
LIGYV+SDFA D D R
Sbjct: 1023 LIGYVDSDFAADLDKR 1038
Score = 37.7 bits (86), Expect(2) = 6e-66
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG LEE IY
Sbjct: 768 EQLDVKTAFLHGELEEEIY 786
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 244 bits (624), Expect(2) = 7e-66
Identities = 131/257 (50%), Positives = 171/257 (66%), Gaps = 1/257 (0%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKE+ C LK S +GLKQSPRQWYK FDSFML GF S +DSC+Y
Sbjct: 266 YMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKWSEFDSCVYIKF 325
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
N S IYLLLYV+DM IA K K +I LK QL EF++KDLG+ +IL M ITRD
Sbjct: 326 VN-GSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDINFG 384
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
LFLSQ+ ++K++ F+MH KP+ TP+A+HFKLS C T+ M+ P A+G
Sbjct: 385 LLFLSQQSYIKKVLEHFNMHDAKPISTPIAAHFKLSALQCASTDEDVGYMSRVPYSSAVG 444
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWS-DDF 54
S+MY+MI +RPD++ ++SL+SR+M+N G++H A++W YL TTD C + D
Sbjct: 445 SLMYAMICSRPDLSHAMSLVSRYMANPGKEHWKAVQWFFRYLRGTTDA---CSKFGRTDK 501
Query: 53 DLIGYVNSDFAGDKDGR 3
L+GYV+SDFA + D R
Sbjct: 502 GLVGYVDSDFAANLDKR 518
Score = 33.5 bits (75), Expect(2) = 7e-66
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
+QLDVKT FLHG LE+ IY
Sbjct: 248 KQLDVKTTFLHGELEDEIY 266
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 241 bits (615), Expect(2) = 1e-65
Identities = 122/256 (47%), Positives = 170/256 (66%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF+VKGKE+ C LK S +GLKQ+PRQWYK F S M K G+ K++ D C++ +R
Sbjct: 935 YMEQPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKTSSDHCVFVNR 994
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
+ D + LLLYV+DM I ++ ++I +LK +L F++KD+G +IL M I RDR N
Sbjct: 995 YSDDDFVILLLYVDDMLIVGRNASRIQELKQELSKSFSMKDMGPAKQILGMKIIRDRQNK 1054
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
L+LSQ+ ++K++ +F M+ KPV TPL HFKL K CP +E +K +M P A+G
Sbjct: 1055 KLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVG 1114
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ TRPDIA ++ ++SRF+SN GR+H A+KW+L YL T+ L C
Sbjct: 1115 SLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSL-CFGTGKPI- 1172
Query: 50 LIGYVNSDFAGDKDGR 3
L GY +SD AGD D R
Sbjct: 1173 LTGYTDSDMAGDIDTR 1188
Score = 36.2 bits (82), Expect(2) = 1e-65
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQ+DVKTAFLHG+L+E IY
Sbjct: 917 EQMDVKTAFLHGDLDEEIY 935
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 240 bits (612), Expect(2) = 4e-65
Identities = 127/256 (49%), Positives = 170/256 (66%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V GKE+ C LK S +GLKQSPRQWYK FDSFML GF +S +DSC+Y
Sbjct: 879 YMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKF 938
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
N S IYLLLYV+DM IA K K +I LK QL EF++KDL ++ +IL M ITRD +
Sbjct: 939 VN-GSHIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLVASKKILGMEITRDINSG 997
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
LFLSQ+ ++K++ +F++H KPV TP+A HFKLS C T+ M+ P +G
Sbjct: 998 LLFLSQQSYIKKVLQRFNIHDAKPVSTPIAPHFKLSALQCTSTDEDVEYMSRVPYSSVVG 1057
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ +RP ++ ++SL+SR+M+N G++H A++W+ YL T D L D
Sbjct: 1058 SLMYAMVCSRPVLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGR--TDKG 1115
Query: 50 LIGYVNSDFAGDKDGR 3
L+GYV+SDFA D D R
Sbjct: 1116 LVGYVDSDFAADLDKR 1131
Score = 35.8 bits (81), Expect(2) = 4e-65
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKT FLHG LEE IY
Sbjct: 861 EQLDVKTIFLHGELEEEIY 879
>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
Length = 1211
Score = 238 bits (608), Expect(2) = 4e-65
Identities = 127/256 (49%), Positives = 173/256 (67%)
Frame = -1
Query: 770 YMRQPPGFEVKGKENMTCLLKTSSHGLKQSPRQWYKMFDSFMLKVGFLKSNYDSCLYFSR 591
YM QP GF V+G+EN+ C L+ S +GLKQ+PRQWYK FD+FM ++GF + D C YF
Sbjct: 822 YMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKS 881
Query: 590 NNVDSAIYLLLYVNDM*IACKHKAKIDDLKSQLKFEFNIKDLGSTSRILRMSITRDRTND 411
+ +S I LLLYV+DM I KI++LK QL +F +KDLG+ +IL M I RD+ N
Sbjct: 882 FD-NSYIILLLYVDDMLITGFDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANG 940
Query: 410 SLFLSQKPSLQKIVSKFSMHLCKPVITPLASHFKLSDKTCPKTESKKRDMANFP*RIAIG 231
+L LSQ ++K++S+F+M+ KPV TPL SHFKLS + PKTE ++ M+ P AIG
Sbjct: 941 TLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIG 1000
Query: 230 SIMYSMISTRPDIAFSISLLSRFMSNLGRDH*AALKWLLHYLNRTTDRVLHCHNWSDDFD 51
S+MY+M+ TRPDIA ++ ++SRFMS G+ H A+KW+L YL + D L C +
Sbjct: 1001 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCL-CFTGA-SLK 1058
Query: 50 LIGYVNSDFAGDKDGR 3
L GYV++DFAGD D R
Sbjct: 1059 LQGYVDADFAGDIDSR 1074
Score = 37.4 bits (85), Expect(2) = 4e-65
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -3
Query: 822 EQLDVKTAFLHGNLEETIY 766
EQLDVKTAFLHG+LEE +Y
Sbjct: 804 EQLDVKTAFLHGDLEEDLY 822