BLASTX nr result
ID: Catharanthus23_contig00017851
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00017851
(300 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341456.1| PREDICTED: pentatricopeptide repeat-containi... 126 3e-27
ref|XP_006394472.1| hypothetical protein EUTSA_v10004369mg [Eutr... 120 2e-25
ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arab... 120 2e-25
ref|XP_002318186.2| hypothetical protein POPTR_0012s11260g [Popu... 120 2e-25
dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas] 120 2e-25
ref|XP_004309554.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
ref|NP_200988.1| pentatricopeptide repeat-containing protein [Ar... 119 5e-25
ref|XP_006282095.1| hypothetical protein CARUB_v10028342mg [Caps... 117 1e-24
ref|XP_006485061.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_004503812.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
gb|EMJ10367.1| hypothetical protein PRUPE_ppa006155mg [Prunus pe... 113 2e-23
ref|XP_002511070.1| pentatricopeptide repeat-containing protein,... 112 4e-23
ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 110 2e-22
ref|XP_006436989.1| hypothetical protein CICLE_v10033340mg, part... 105 5e-21
gb|EOX99095.1| Pentatricopeptide repeat superfamily protein [The... 105 5e-21
gb|EXC33996.1| hypothetical protein L484_007553 [Morus notabilis] 104 1e-20
ref|XP_006484519.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_006437608.1| hypothetical protein CICLE_v10031339mg [Citr... 103 2e-20
gb|EXC35167.1| hypothetical protein L484_022720 [Morus notabilis] 103 2e-20
ref|XP_006586321.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
>ref|XP_006341456.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Solanum tuberosum]
Length = 531
Score = 126 bits (317), Expect = 3e-27
Identities = 59/98 (60%), Positives = 79/98 (80%)
Frame = +3
Query: 6 KTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVKA 185
+TLH +ALKFGF+ D+FVCN+L+ +Y+V+G IS+A +FDE RD+VSYN++IDG+VKA
Sbjct: 139 RTLHSQALKFGFLVDVFVCNNLVRVYTVSGSISDARRVFDESCDRDVVSYNLIIDGYVKA 198
Query: 186 AEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
EI +ARE+F+ MP R+ VSWGTLM GYAK Q +AI
Sbjct: 199 GEIGEAREVFDEMPVRDAVSWGTLMAGYAKMNQCKDAI 236
>ref|XP_006394472.1| hypothetical protein EUTSA_v10004369mg [Eutrema salsugineum]
gi|557091111|gb|ESQ31758.1| hypothetical protein
EUTSA_v10004369mg [Eutrema salsugineum]
Length = 393
Score = 120 bits (301), Expect = 2e-25
Identities = 57/98 (58%), Positives = 76/98 (77%)
Frame = +3
Query: 6 KTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVKA 185
KTLHC+AL+FG ++DLF N+LI +YS+ I +A LFDE P RD+V+YNV+IDG VKA
Sbjct: 31 KTLHCQALRFGLVSDLFTLNTLIRVYSLITPIESALQLFDENPQRDVVTYNVLIDGLVKA 90
Query: 186 AEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
EIV+ARELF+ MP R++VSW +L+ GYA+ + EAI
Sbjct: 91 REIVRARELFDSMPFRDLVSWNSLIAGYAQMNHYREAI 128
>ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata] gi|297312290|gb|EFH42714.1| hypothetical protein
ARALYDRAFT_496347 [Arabidopsis lyrata subsp. lyrata]
Length = 1401
Score = 120 bits (301), Expect = 2e-25
Identities = 58/98 (59%), Positives = 75/98 (76%)
Frame = +3
Query: 6 KTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVKA 185
KTLHC+AL+FG ++DLF N+LI YS+ I +A LFDE P RD+V+YNV+IDG VKA
Sbjct: 551 KTLHCQALRFGLLSDLFTLNTLIRAYSLMAPIGSALQLFDENPQRDVVTYNVLIDGLVKA 610
Query: 186 AEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
EIV+ARELF+ MP R++VSW +L+ GYA+ Q EAI
Sbjct: 611 CEIVRARELFDSMPFRDLVSWNSLIAGYAQMNQCREAI 648
>ref|XP_002318186.2| hypothetical protein POPTR_0012s11260g [Populus trichocarpa]
gi|550326865|gb|EEE96406.2| hypothetical protein
POPTR_0012s11260g [Populus trichocarpa]
Length = 536
Score = 120 bits (300), Expect = 2e-25
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
A+ LHC+ LKFGF++DL+V NSLIH Y V ++A+ +FDE P RD+VSYNV+IDGFVK
Sbjct: 142 ARCLHCQVLKFGFLSDLYVMNSLIHGYMVCDMSNDAYKVFDESPQRDVVSYNVLIDGFVK 201
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
A ++VKARELF+ MP R+ VSW T++ G AK EAI
Sbjct: 202 AGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAI 240
>dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]
Length = 248
Score = 120 bits (300), Expect = 2e-25
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
A +LH +A KFGF++DL+V NSLIH+YSV+ + +A+ +FDE P +D+VSYN +IDGFVK
Sbjct: 139 ANSLHSQAFKFGFMSDLYVVNSLIHVYSVSDRLCDAYQVFDESPRKDVVSYNAVIDGFVK 198
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
++ KAR+LF+RMP R+ VSWGT++ GYA+ EAI
Sbjct: 199 VGDVEKARKLFDRMPVRDSVSWGTIISGYAQGSYCKEAI 237
>ref|XP_004309554.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Fragaria vesca subsp. vesca]
Length = 527
Score = 119 bits (299), Expect = 3e-25
Identities = 55/99 (55%), Positives = 75/99 (75%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
++ LH +ALKFGF + FV N+LIH+YSV ++++A LFDE PH+DMVSYN M+D FVK
Sbjct: 133 SQALHSQALKFGFASHSFVANTLIHVYSVCHNLNHARQLFDESPHKDMVSYNAMLDAFVK 192
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
E+ ARE+F+ MPER+ VSWGT++ GYA+ + EAI
Sbjct: 193 GGEMDNAREVFDEMPERDSVSWGTVLAGYAQTSRCEEAI 231
>ref|NP_200988.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171532|sp|Q9FLS9.1|PP441_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g61800 gi|10176873|dbj|BAB10080.1| unnamed protein
product [Arabidopsis thaliana]
gi|332010136|gb|AED97519.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 499
Score = 119 bits (297), Expect = 5e-25
Identities = 57/98 (58%), Positives = 75/98 (76%)
Frame = +3
Query: 6 KTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVKA 185
KTLHC+AL+FG ++DLF N+LI +YS+ I +A LFDE P RD+V+YNV+IDG VKA
Sbjct: 137 KTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKA 196
Query: 186 AEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
EIV+ARELF+ MP R++VSW +L+ GYA+ EAI
Sbjct: 197 REIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAI 234
>ref|XP_006282095.1| hypothetical protein CARUB_v10028342mg [Capsella rubella]
gi|482550799|gb|EOA14993.1| hypothetical protein
CARUB_v10028342mg [Capsella rubella]
Length = 501
Score = 117 bits (294), Expect = 1e-24
Identities = 57/98 (58%), Positives = 74/98 (75%)
Frame = +3
Query: 6 KTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVKA 185
KTLHC+AL+FG ++DLF N+LI +YS+ I A LFDE P RD+V+YNV+IDG VK
Sbjct: 139 KTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIGIALQLFDENPQRDVVTYNVLIDGLVKG 198
Query: 186 AEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
EIV+ARELF+ MP R++VSW +L+ GYA+ Q EAI
Sbjct: 199 REIVRARELFDSMPFRDLVSWNSLIAGYAQMNQCREAI 236
>ref|XP_006485061.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Citrus sinensis]
Length = 523
Score = 114 bits (285), Expect = 1e-23
Identities = 54/99 (54%), Positives = 75/99 (75%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
A+T+H + LK GFI D+FV NSL+H+Y V + +A LFDE+ +RD+VS N +IDG+VK
Sbjct: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
A ++ AR+LF+RMP R+ VSWGTL+ GYA++ Q EAI
Sbjct: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
>ref|XP_004503812.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Cicer arietinum]
Length = 494
Score = 114 bits (284), Expect = 2e-23
Identities = 52/99 (52%), Positives = 76/99 (76%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
A+++H +A KFGF+ D FV NSLI +YSV +++AH LF + +RD+VSYNVM+DGFVK
Sbjct: 132 AQSIHSQAYKFGFLVDSFVLNSLIRVYSVHDRVNDAHKLFCQCSYRDVVSYNVMVDGFVK 191
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
+ ++ +AR+LF+ MP+RN +SWGT++ GY+ A EAI
Sbjct: 192 SFQLDRARKLFDEMPQRNEISWGTMIAGYSHAKLCAEAI 230
>gb|EMJ10367.1| hypothetical protein PRUPE_ppa006155mg [Prunus persica]
Length = 425
Score = 113 bits (283), Expect = 2e-23
Identities = 54/99 (54%), Positives = 74/99 (74%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
++ LH +ALKFGF + LFV N+LIH+YS+ +++A +FDE RD+VSYN M+D FVK
Sbjct: 31 SQALHSQALKFGFASHLFVSNTLIHVYSICHHLNHACKVFDESSRRDVVSYNAMLDAFVK 90
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
A E+ +AR+LFE MP R+ VSWGT++ GYA+ Q EAI
Sbjct: 91 AGEVSRARQLFEEMPVRDSVSWGTVLVGYAQMNQCEEAI 129
>ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550185|gb|EEF51672.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 551
Score = 112 bits (281), Expect = 4e-23
Identities = 54/99 (54%), Positives = 73/99 (73%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
A+ LH + KFGF++DL+V NSLIH+YS+ ++ A +FDE RD+VSYN ++DGFVK
Sbjct: 156 AQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYNALVDGFVK 215
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
A E VKARE+F+ MP R+ VSWG+L+ GYA+ EAI
Sbjct: 216 AGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAI 254
>ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 110 bits (275), Expect = 2e-22
Identities = 51/93 (54%), Positives = 71/93 (76%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
A+TLH +A KFGF ADLFVCN+LIH+YSV + +A +F+E +D+VSYN +I GF+K
Sbjct: 148 AQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNALIGGFIK 207
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAG 281
+ +AR LF++MP R+ VSWGTL+ GYA++G
Sbjct: 208 VGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSG 240
>ref|XP_006436989.1| hypothetical protein CICLE_v10033340mg, partial [Citrus clementina]
gi|557539185|gb|ESR50229.1| hypothetical protein
CICLE_v10033340mg, partial [Citrus clementina]
Length = 527
Score = 105 bits (263), Expect = 5e-21
Identities = 50/99 (50%), Positives = 72/99 (72%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
A+T+H + LK GFI D+FV NSL+ +Y + + +A LFDE +RD+VS N +IDG+VK
Sbjct: 134 AQTIHSQVLKLGFICDVFVLNSLMRVYCIFHRLRDAQELFDESLYRDVVSCNTLIDGYVK 193
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
A ++ AR+LF+ +P R+ VSWGTL+ GYA++ Q EAI
Sbjct: 194 AGDLAHARQLFDTLPFRDAVSWGTLVAGYAQSDQCQEAI 232
>gb|EOX99095.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 530
Score = 105 bits (263), Expect = 5e-21
Identities = 48/96 (50%), Positives = 70/96 (72%)
Frame = +3
Query: 12 LHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVKAAE 191
+HC ALK GF D F+ NSLIH+Y+ DI A +FDELP +++VS+N M+DG+ K +
Sbjct: 124 IHCHALKNGFELDKFINNSLIHMYASCHDIVYARRVFDELPMKNIVSWNAMLDGYAKCGD 183
Query: 192 IVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
+ AR++F+ MP+R+VVSW L+ GYAK+G + EA+
Sbjct: 184 MALARQVFDWMPQRDVVSWSCLIDGYAKSGDYKEAL 219
>gb|EXC33996.1| hypothetical protein L484_007553 [Morus notabilis]
Length = 465
Score = 104 bits (259), Expect = 1e-20
Identities = 45/98 (45%), Positives = 70/98 (71%)
Frame = +3
Query: 6 KTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVKA 185
+T+H K G+ +D+F+ +SLIH+Y+ GDI A +FD++ R++VS+ M+DG+ K
Sbjct: 109 ETVHAVIAKHGYESDIFIQSSLIHMYASCGDIQYARKVFDKMTQRNLVSWTAMLDGYAKC 168
Query: 186 AEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
++ ARE+FE MPER+VVSW +L+ GY KAG + EA+
Sbjct: 169 GDVKSAREVFELMPERDVVSWSSLIDGYVKAGDYSEAL 206
>ref|XP_006484519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Citrus sinensis]
Length = 537
Score = 103 bits (258), Expect = 2e-20
Identities = 48/99 (48%), Positives = 67/99 (67%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
A +H + K G+ +DLF+ NSLIH+Y GDI +A +FD +P + VS+N M+DG+ K
Sbjct: 128 AVAVHAQIAKTGYESDLFISNSLIHMYGSCGDIVHAREVFDGMPTKMSVSWNSMLDGYAK 187
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
E+ AR++FE MPERNVVSW L+ GY K G + EA+
Sbjct: 188 CGEMNMARQVFELMPERNVVSWSALIDGYVKCGDYKEAL 226
>ref|XP_006437608.1| hypothetical protein CICLE_v10031339mg [Citrus clementina]
gi|557539804|gb|ESR50848.1| hypothetical protein
CICLE_v10031339mg [Citrus clementina]
Length = 491
Score = 103 bits (258), Expect = 2e-20
Identities = 48/99 (48%), Positives = 67/99 (67%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
A +H + K G+ +DLF+ NSLIH+Y GDI +A +FD +P + VS+N M+DG+ K
Sbjct: 82 AVAVHAQIAKTGYESDLFISNSLIHMYGSCGDIVHAREVFDGMPTKMSVSWNSMLDGYAK 141
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYAKAGQFIEAI 299
E+ AR++FE MPERNVVSW L+ GY K G + EA+
Sbjct: 142 CGEMNMARQVFELMPERNVVSWSALIDGYVKCGDYKEAL 180
>gb|EXC35167.1| hypothetical protein L484_022720 [Morus notabilis]
Length = 642
Score = 103 bits (257), Expect = 2e-20
Identities = 48/89 (53%), Positives = 65/89 (73%)
Frame = +3
Query: 15 HCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVKAAEI 194
H K ++FGF +DLFV NSLIH+YSV G + +A +FDE+P D+VS+N MI G+VK E+
Sbjct: 182 HSKVVRFGFGSDLFVRNSLIHMYSVCGSVGDARKVFDEMPELDLVSWNSMIHGYVKNGEV 241
Query: 195 VKARELFERMPERNVVSWGTLMGGYAKAG 281
AR+LFE MP+R+ SW TL+ GY + G
Sbjct: 242 DVARKLFEVMPKRDAFSWNTLVMGYVEKG 270
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +3
Query: 48 DLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVKAAEIVKARELFERMP 227
D F N+L+ Y G++ A +LFD +P +D+VS+N MIDG+ + + A E F MP
Sbjct: 255 DAFSWNTLVMGYVEKGNMEAAKLLFDIIPDKDVVSWNCMIDGYARTGNVSAACEFFNGMP 314
Query: 228 ERNVVSWGTLMGGYAKAGQFIEAI 299
RN+VSW T++ Y ++ + E +
Sbjct: 315 LRNIVSWNTMLALYVRSKDYSECL 338
>ref|XP_006586321.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Glycine max]
Length = 496
Score = 103 bits (257), Expect = 2e-20
Identities = 47/90 (52%), Positives = 67/90 (74%)
Frame = +3
Query: 3 AKTLHCKALKFGFIADLFVCNSLIHLYSVAGDISNAHVLFDELPHRDMVSYNVMIDGFVK 182
A++LH +ALKFG + DLF N+LI +YS+ +++AH LF E PH D+VSYN +I G VK
Sbjct: 128 AQSLHSQALKFGLLPDLFSLNTLIGVYSIHHRVNDAHKLFYECPHGDVVSYNALIHGLVK 187
Query: 183 AAEIVKARELFERMPERNVVSWGTLMGGYA 272
+I +ARELF+ MP R+ +SWGT++ GY+
Sbjct: 188 TRQISRARELFDEMPVRDEISWGTMIAGYS 217