BLASTX nr result
ID: Catharanthus23_contig00017789
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00017789
(872 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS59086.1| hypothetical protein M569_15724, partial [Genlise... 109 1e-21
ref|XP_006356840.1| PREDICTED: RNA-binding protein 1-like [Solan... 106 1e-20
ref|XP_004238077.1| PREDICTED: RNA-binding protein Musashi homol... 106 1e-20
ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea ma... 103 6e-20
ref|XP_004982907.1| PREDICTED: heterogeneous nuclear ribonucleop... 103 1e-19
ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea ma... 101 4e-19
gb|EOY15656.1| RNA-binding family protein, putative [Theobroma c... 100 5e-19
gb|EMT18277.1| RNA-binding Musashi-2-like protein [Aegilops taus... 100 1e-18
dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgar... 99 3e-18
ref|NP_001064824.1| Os10g0470900 [Oryza sativa Japonica Group] g... 97 6e-18
gb|EAZ16390.1| hypothetical protein OsJ_31855 [Oryza sativa Japo... 97 6e-18
ref|XP_006661850.1| PREDICTED: heterogeneous nuclear ribonucleop... 97 8e-18
gb|ABR16827.1| unknown [Picea sitchensis] 97 1e-17
ref|XP_006385422.1| hypothetical protein POPTR_0003s04340g [Popu... 96 1e-17
gb|EMJ24141.1| hypothetical protein PRUPE_ppa005309mg [Prunus pe... 96 1e-17
ref|XP_004234048.1| PREDICTED: heterogeneous nuclear ribonucleop... 96 1e-17
ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832... 96 1e-17
gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japo... 96 1e-17
gb|EXC25278.1| RNA-binding protein Musashi-Rbp6-like protein [Mo... 96 2e-17
gb|EXC24410.1| Uncharacterized RNA-binding protein [Morus notabi... 96 2e-17
>gb|EPS59086.1| hypothetical protein M569_15724, partial [Genlisea aurea]
Length = 205
Score = 109 bits (273), Expect = 1e-21
Identities = 51/73 (69%), Positives = 62/73 (84%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
+DQSKLFVGG+SWETTE L +HFS+YGTV+ S IA+DR +G PRGFAFV+FSE ++VD
Sbjct: 5 ADQSKLFVGGISWETTEDILNDHFSKYGTVISSAIAKDRNSGVPRGFAFVTFSESSSVDR 64
Query: 328 ALQDSHDILGRTV 290
ALQ+SH IL RTV
Sbjct: 65 ALQESHQILSRTV 77
>ref|XP_006356840.1| PREDICTED: RNA-binding protein 1-like [Solanum tuberosum]
Length = 344
Score = 106 bits (265), Expect = 1e-20
Identities = 51/77 (66%), Positives = 66/77 (85%)
Frame = -2
Query: 520 MEDISDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPA 341
MED+ D+SKLF GG+ +T+++ L +HFS+YGTVV SVIA+DR G PRGFAFV+FS+P+
Sbjct: 1 MEDL-DKSKLFCGGIPRDTSDEMLKDHFSKYGTVVSSVIAKDRETGRPRGFAFVTFSDPS 59
Query: 340 AVDLALQDSHDILGRTV 290
AVDLALQD+H+ILGR V
Sbjct: 60 AVDLALQDTHEILGRMV 76
Score = 59.3 bits (142), Expect = 2e-06
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = -2
Query: 496 KLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDLALQD 317
K+FVGG+S ++ +F R+GT+ D V+ D + PRGF F++F AV+ +Q+
Sbjct: 116 KIFVGGLSASLNQEDFKSYFERFGTITDVVVMHDNVTHRPRGFGFITFDSEDAVEEVMQE 175
Query: 316 S-HDILGRTV 290
S H++ G+ V
Sbjct: 176 SFHELSGKFV 185
>ref|XP_004238077.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Solanum
lycopersicum]
Length = 341
Score = 106 bits (265), Expect = 1e-20
Identities = 51/77 (66%), Positives = 66/77 (85%)
Frame = -2
Query: 520 MEDISDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPA 341
MED+ D+SKLF GG+ +T+++ L +HFS+YGTVV SVIA+DR G PRGFAFVSF++P+
Sbjct: 1 MEDL-DKSKLFCGGIPRDTSDEMLKDHFSKYGTVVSSVIAKDRETGRPRGFAFVSFTDPS 59
Query: 340 AVDLALQDSHDILGRTV 290
AVDLALQD+H+ILGR V
Sbjct: 60 AVDLALQDTHEILGRMV 76
>ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein
ZEAMMB73_548572 [Zea mays] gi|413934066|gb|AFW68617.1|
hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein
ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 103 bits (258), Expect = 6e-20
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWETTE+ L+EHFS YG V + + RD++ G PRGF FV F++PAAVD
Sbjct: 3 SDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDR 62
Query: 328 ALQDSHDILGRTV 290
ALQD H + GRTV
Sbjct: 63 ALQDPHTLDGRTV 75
>ref|XP_004982907.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Setaria italica] gi|514816331|ref|XP_004982908.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X2 [Setaria italica]
Length = 445
Score = 103 bits (256), Expect = 1e-19
Identities = 46/73 (63%), Positives = 56/73 (76%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWETTE+ L+EHFS YG V + + RD+L G PRGF FV F++PA VD
Sbjct: 3 SDQGKLFIGGISWETTEEKLSEHFSSYGEVTQAAVMRDKLTGRPRGFGFVVFADPAVVDR 62
Query: 328 ALQDSHDILGRTV 290
ALQD H + GRTV
Sbjct: 63 ALQDPHTLDGRTV 75
>ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein
ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 101 bits (251), Expect = 4e-19
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWETTE+ L+EHFS YG V + + RD+ G PRGF FV F++PA VD
Sbjct: 3 SDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVVDR 62
Query: 328 ALQDSHDILGRTV 290
ALQD H + GRTV
Sbjct: 63 ALQDPHTLDGRTV 75
>gb|EOY15656.1| RNA-binding family protein, putative [Theobroma cacao]
Length = 401
Score = 100 bits (250), Expect = 5e-19
Identities = 49/73 (67%), Positives = 57/73 (78%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLFVGG+S ETTE L +HFSRYG V+ SV+A+DR PRGF FV FSEP++ D
Sbjct: 3 SDQGKLFVGGISRETTEAILKDHFSRYGNVMSSVVAKDRNTKTPRGFGFVLFSEPSSADK 62
Query: 328 ALQDSHDILGRTV 290
ALQD+H ILGRTV
Sbjct: 63 ALQDTHVILGRTV 75
>gb|EMT18277.1| RNA-binding Musashi-2-like protein [Aegilops tauschii]
Length = 453
Score = 99.8 bits (247), Expect = 1e-18
Identities = 44/73 (60%), Positives = 56/73 (76%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWETTE+ L EHFS +G V + + RD+L G PRGF FV +++PAAVD
Sbjct: 3 SDQGKLFIGGISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDA 62
Query: 328 ALQDSHDILGRTV 290
ALQ+ H + GRTV
Sbjct: 63 ALQEPHTLDGRTV 75
>dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 453
Score = 98.6 bits (244), Expect = 3e-18
Identities = 43/73 (58%), Positives = 56/73 (76%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWETTE+ L EHFS +G V + + RD+L G PRGF FV +++PA+VD
Sbjct: 3 SDQGKLFIGGISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDA 62
Query: 328 ALQDSHDILGRTV 290
ALQ+ H + GRTV
Sbjct: 63 ALQEPHTLDGRTV 75
>ref|NP_001064824.1| Os10g0470900 [Oryza sativa Japonica Group]
gi|10716605|gb|AAG21903.1|AC026815_7 putative RNA
binding protein [Oryza sativa Japonica Group]
gi|31432618|gb|AAP54226.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113639433|dbj|BAF26738.1| Os10g0470900 [Oryza sativa
Japonica Group]
Length = 464
Score = 97.4 bits (241), Expect = 6e-18
Identities = 43/73 (58%), Positives = 55/73 (75%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWETTE+ L +HF+ YG V + + RD+L G PRGF FV FS+P++VD
Sbjct: 3 SDQGKLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDA 62
Query: 328 ALQDSHDILGRTV 290
AL D H + GRTV
Sbjct: 63 ALVDPHTLDGRTV 75
>gb|EAZ16390.1| hypothetical protein OsJ_31855 [Oryza sativa Japonica Group]
Length = 463
Score = 97.4 bits (241), Expect = 6e-18
Identities = 43/73 (58%), Positives = 55/73 (75%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWETTE+ L +HF+ YG V + + RD+L G PRGF FV FS+P++VD
Sbjct: 3 SDQGKLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDA 62
Query: 328 ALQDSHDILGRTV 290
AL D H + GRTV
Sbjct: 63 ALVDPHTLDGRTV 75
>ref|XP_006661850.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Oryza
brachyantha]
Length = 455
Score = 97.1 bits (240), Expect = 8e-18
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWETTE+ L +HF YG V + + RD+L G PRGF FV F+ PAAVD
Sbjct: 3 SDQGKLFIGGISWETTEEKLRDHFGAYGEVSQAAVMRDKLTGRPRGFGFVVFAAPAAVDA 62
Query: 328 ALQDSHDILGRTV 290
AL D H + GRTV
Sbjct: 63 ALVDPHTLDGRTV 75
>gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 96.7 bits (239), Expect = 1e-17
Identities = 43/73 (58%), Positives = 55/73 (75%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
++Q K+F+GG+SWETTE+TL E+F YG VV++VI RD++ G RGF F+ FSEP AVD
Sbjct: 3 TEQGKVFIGGISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDR 62
Query: 328 ALQDSHDILGRTV 290
LQD H I GR V
Sbjct: 63 VLQDKHTIDGRQV 75
>ref|XP_006385422.1| hypothetical protein POPTR_0003s04340g [Populus trichocarpa]
gi|550342385|gb|ERP63219.1| hypothetical protein
POPTR_0003s04340g [Populus trichocarpa]
Length = 421
Score = 96.3 bits (238), Expect = 1e-17
Identities = 45/75 (60%), Positives = 55/75 (73%)
Frame = -2
Query: 514 DISDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAV 335
D S KLFVGGVSWETTE+T T +FS+YG V+DSVI DR +G PRGF FV+F++PA
Sbjct: 75 DSSSAGKLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPAVA 134
Query: 334 DLALQDSHDILGRTV 290
D L++ H I GR V
Sbjct: 135 DRVLEEDHVIDGRAV 149
>gb|EMJ24141.1| hypothetical protein PRUPE_ppa005309mg [Prunus persica]
Length = 467
Score = 96.3 bits (238), Expect = 1e-17
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWET+E L E+FS YG V+ +V+ RD++ G PRGF FV F +PA +D
Sbjct: 3 SDQGKLFIGGISWETSEDKLKEYFSNYGDVLQTVVMRDKVTGRPRGFGFVVFVDPAVLDR 62
Query: 328 ALQDSHDILGRTV 290
LQD H I GRTV
Sbjct: 63 VLQDKHTIDGRTV 75
Score = 59.3 bits (142), Expect = 2e-06
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = -2
Query: 496 KLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDLALQD 317
K+FVGG+ +E+ E+F YG V D V+ D+ G PRGF F+SF AVD L
Sbjct: 111 KIFVGGLPPTLSEEGFREYFETYGHVTDVVVMYDQSTGRPRGFGFISFDTEEAVDRVLHK 170
Query: 316 S-HDILGRTV 290
+ HD+ G+ V
Sbjct: 171 TFHDLNGKQV 180
>ref|XP_004234048.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Solanum
lycopersicum]
Length = 427
Score = 96.3 bits (238), Expect = 1e-17
Identities = 42/73 (57%), Positives = 56/73 (76%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GGVSWET+E+ + E+F YG VV +V+ RD++ G PRGF FV F++P+ +D
Sbjct: 3 SDQGKLFIGGVSWETSEEKMKEYFQGYGDVVQTVVMRDKITGKPRGFGFVVFADPSVIDR 62
Query: 328 ALQDSHDILGRTV 290
LQD+H I GRTV
Sbjct: 63 VLQDTHVIDGRTV 75
>ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 96.3 bits (238), Expect = 1e-17
Identities = 43/73 (58%), Positives = 55/73 (75%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWETTE+ L EHFS +G V + + RD+L G PRGF FV +++PAAVD
Sbjct: 3 SDQGKLFIGGISWETTEEKLHEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDA 62
Query: 328 ALQDSHDILGRTV 290
AL + H + GRTV
Sbjct: 63 ALLEPHTLDGRTV 75
>gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 96.3 bits (238), Expect = 1e-17
Identities = 41/76 (53%), Positives = 57/76 (75%)
Frame = -2
Query: 517 EDISDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAA 338
E++ + K+FVGGV+WETTE++ T+HF +YG + DSVI +D+ PRGF FV+FS+P+
Sbjct: 22 EEVEEVEKIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSV 81
Query: 337 VDLALQDSHDILGRTV 290
+D LQD H I GRTV
Sbjct: 82 IDKVLQDEHTIDGRTV 97
Score = 59.7 bits (143), Expect = 1e-06
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = -2
Query: 496 KLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDLALQD 317
K+FVGG+ TE L EHFS YG VV+ I D G RGF FV+F AV+ + +
Sbjct: 118 KIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSE 177
Query: 316 S--HDILGRTV 290
HD+ G+ V
Sbjct: 178 GRMHDLAGKQV 188
>gb|EXC25278.1| RNA-binding protein Musashi-Rbp6-like protein [Morus notabilis]
Length = 301
Score = 95.9 bits (237), Expect = 2e-17
Identities = 45/73 (61%), Positives = 61/73 (83%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
+D++KLFVGG+S ET+E +L E+F +YGTV++SVIA+DR+ +PRGF FV FS+ ++VD
Sbjct: 3 NDRAKLFVGGISRETSEDSLKEYFGKYGTVLESVIAKDRITKSPRGFGFVWFSDASSVDK 62
Query: 328 ALQDSHDILGRTV 290
AL DSH ILGRTV
Sbjct: 63 ALNDSHVILGRTV 75
Score = 59.3 bits (142), Expect = 2e-06
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = -2
Query: 496 KLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDLALQD 317
K+FVGG+S TE+ +F R+GT+ D V+ D PRGF F++F+ +V+ +++
Sbjct: 113 KIFVGGLSASLTEEEFKNYFERFGTITDVVVMHDSTTHRPRGFGFITFASEDSVENVVRN 172
Query: 316 S-HDILGRTV 290
S H++ GR V
Sbjct: 173 SFHELNGRLV 182
>gb|EXC24410.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 450
Score = 95.9 bits (237), Expect = 2e-17
Identities = 41/73 (56%), Positives = 55/73 (75%)
Frame = -2
Query: 508 SDQSKLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDL 329
SDQ KLF+GG+SWETTE+ L E+F YG V+ +V+ R++ G PRGF FV F++P+ +D
Sbjct: 3 SDQGKLFIGGISWETTEEKLKEYFENYGDVLQTVVMREKFTGRPRGFGFVVFTDPSVLDR 62
Query: 328 ALQDSHDILGRTV 290
LQD+H I GRTV
Sbjct: 63 VLQDNHSIDGRTV 75
Score = 60.5 bits (145), Expect = 8e-07
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = -2
Query: 496 KLFVGGVSWETTEQTLTEHFSRYGTVVDSVIARDRLNGNPRGFAFVSFSEPAAVDLALQD 317
K+FVGG+ TE+ E+F YG V D V+ D+ G PRGF F+SF AVD L
Sbjct: 111 KIFVGGLPPTLTEEGFREYFEAYGRVTDVVVMYDQNTGRPRGFGFISFDAEDAVDRVLHK 170
Query: 316 S-HDILGRTV 290
+ HD+ G+ V
Sbjct: 171 TFHDLNGKQV 180