BLASTX nr result
ID: Catharanthus23_contig00017729
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00017729
(2836 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt... 753 0.0
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt... 745 0.0
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt... 737 0.0
emb|CBI34194.3| unnamed protein product [Vitis vinifera] 739 0.0
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt... 743 0.0
gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [... 728 0.0
gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus no... 714 0.0
ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citr... 719 0.0
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt... 727 0.0
gb|EOY11113.1| Pseudouridine synthase family protein, putative i... 715 0.0
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu... 717 0.0
gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus pe... 716 0.0
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt... 712 0.0
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric... 713 0.0
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C... 699 0.0
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g... 709 0.0
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt... 674 0.0
ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata... 675 0.0
ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Caps... 668 0.0
ref|XP_006408145.1| hypothetical protein EUTSA_v10022286mg, part... 671 0.0
>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
vinifera]
Length = 694
Score = 753 bits (1944), Expect(2) = 0.0
Identities = 393/567 (69%), Positives = 447/567 (78%), Gaps = 7/567 (1%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGSESWPESLGKF 762
KF + GPDT+SKCIRVRLN G +H S+KRK+R DKP+DSRGS++W E +GKF
Sbjct: 131 KFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGSDNWSEHVGKF 190
Query: 763 LRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN 942
LRFHL+KENKDTQEA+G+IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQ A+RLAALN
Sbjct: 191 LRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAALN 250
Query: 943 ERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFG 1122
ERLIGIK+GDFCHV EGLVLGQL GNRFTITLRGVVA+SE+ IK S +AL + GFINYFG
Sbjct: 251 ERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFG 310
Query: 1123 LQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQ 1302
LQRFGS SVPTHLIGA LLRGEW+ AV LILDPREGE++AIR+ REYYKE+ DIEGTLRQ
Sbjct: 311 LQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGTLRQ 370
Query: 1303 LPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVD 1482
PRHLVAE+AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAASMR++ YG
Sbjct: 371 FPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTK 430
Query: 1483 QVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVT 1662
QVVLGDLVY K A K SE +D +D + H DEISETD+PEE VKA+
Sbjct: 431 QVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALD 490
Query: 1663 EEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSM 1842
EDL G Y +DDVVLPLPGSR IYP NDI +VYHD AKKD+I+L ESAHS+KEFSIT+M
Sbjct: 491 AEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNM 550
Query: 1843 TGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR-----SAEQANLGNGKGRHE 2007
TGG+RRVFQK DFEWE+LTY +GN+PLAETD+D I KS+ E + GN K E
Sbjct: 551 TGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEK---E 607
Query: 2008 DAIDNEEQSVSFPGSLKDSSKDNE-GGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLP 2184
++ +QS SF ++ S+ +NE G G Q E S E Q ALKLSFTLP
Sbjct: 608 NSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVE--PQFESGAPEAQRALKLSFTLP 665
Query: 2185 ASCYATMAIRELLKTSTSVAFHKTLNT 2265
ASCYATMAIRELLKTSTSVAF KTLNT
Sbjct: 666 ASCYATMAIRELLKTSTSVAFQKTLNT 692
Score = 157 bits (396), Expect(2) = 0.0
Identities = 77/120 (64%), Positives = 94/120 (78%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE 430
MK L+ESDVGI YIS+LPGFRGILKQRY DFIVNEVD +G VV LTSL APPE +++ E
Sbjct: 1 MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60
Query: 431 VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 610
K+SD+ NK Y +EI+ FR++ GDSD + LK ID++ G+E + PIVLS SSDKSHRT
Sbjct: 61 TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120
>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
tuberosum]
Length = 685
Score = 745 bits (1923), Expect(2) = 0.0
Identities = 393/563 (69%), Positives = 450/563 (79%), Gaps = 4/563 (0%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGSESWPESLGKF 762
KF + G + SKC+RVRLN +GR S+KRK+RDDK YDSRGS+SWP LGKF
Sbjct: 131 KFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRSSRKRKDRDDKRYDSRGSDSWPGHLGKF 190
Query: 763 LRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN 942
LRFHL KENKDTQEAL VI KMLG+Q RSFGFAGTKDKR+VSTQRVTVFKQ+AS+LAALN
Sbjct: 191 LRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFKQQASKLAALN 250
Query: 943 ERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFG 1122
+RLIGIK+GDFCHV EGL+LGQL+GNRFTITLRGV AESEDIIK S AL K GFINYFG
Sbjct: 251 KRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFG 310
Query: 1123 LQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQ 1302
LQRFGSSSVPTHLIGA LLRGEWKAAV LILDPREGEK AI VREYYKE+GDI+GTLRQ
Sbjct: 311 LQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYKESGDIDGTLRQ 370
Query: 1303 LPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVD 1482
LPR+LVAEKAI+QCL++SPGN+LQALKAIPRTLRMMYVHSYQSYLWNHAASMR++K+G D
Sbjct: 371 LPRYLVAEKAILQCLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFD 430
Query: 1483 QVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVT 1662
QVVLGDLVY KE+ KE + +E ED + N+ + +LDEISETD+PEE VK +
Sbjct: 431 QVVLGDLVYSKEEYKVKE--SFVAECEDVNDNNMDDYSNLDEISETDLPEERNIPVKVIN 488
Query: 1663 EEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSM 1842
EEDL +GTY +DDV+LPLPGSRVIYP NDIGEVY DLA+KD I+L E+AH IKEFSIT+M
Sbjct: 489 EEDLKSGTYAIDDVLLPLPGSRVIYPSNDIGEVYCDLAQKDDISLTETAHKIKEFSITNM 548
Query: 1843 TGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGNGKGRHEDAIDN 2022
TG YRRVFQK KDFEWE+L+Y DG +PLAETDFDVI S ++ G E D+
Sbjct: 549 TGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIANSVKSKVREEDPTNGSKELPADS 608
Query: 2023 EEQSVS---FPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLPASC 2193
SV G + + +NE G +Q+E S S + +E+Q ALKLSFTLPASC
Sbjct: 609 SAISVGGDMLSGKVCEEKINNEAG------MQSEKSQ-SGGNAEESQMALKLSFTLPASC 661
Query: 2194 YATMAIRELLKTSTSVAFHKTLN 2262
YATMA+RELLKTSTSVAFHK+LN
Sbjct: 662 YATMAVRELLKTSTSVAFHKSLN 684
Score = 164 bits (416), Expect(2) = 0.0
Identities = 82/120 (68%), Positives = 98/120 (81%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE 430
MK++DESDVGI CYIS LPGFRGILKQRYSDFIVNEVDL+ VV LT L AP E + K+
Sbjct: 1 MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLTLLEAPKECSENKD 60
Query: 431 VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 610
V +SD+ N+SY EI+SFR++AG+SDAD LK FID++ G +V+ E IVLSPSSDKSHRT
Sbjct: 61 VNISDQLNRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHRT 120
>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
lycopersicum]
Length = 685
Score = 737 bits (1903), Expect(2) = 0.0
Identities = 390/563 (69%), Positives = 448/563 (79%), Gaps = 4/563 (0%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRDG-SKKRKNRDDKPYDSRGSESWPESLGKF 762
KF + G + SKC+RVRLN +GR S+KRK+R+DK YDSRGS+SWP LGKF
Sbjct: 131 KFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRYSRKRKDRNDKRYDSRGSDSWPGHLGKF 190
Query: 763 LRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN 942
LRFHL KENKDTQEAL VI KMLG+Q RSFGFAGTKDKR+VSTQRVTVFKQ+AS+LAALN
Sbjct: 191 LRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFKQQASKLAALN 250
Query: 943 ERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFG 1122
+RLIGIK+GDFCHV EGL+LGQL+GNRFTITLRGV AESEDIIK S AL K GFINYFG
Sbjct: 251 KRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFG 310
Query: 1123 LQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQ 1302
LQRFGSSSVPTHLIGA LLRGEWKAAV LILDPREGEK I VREYYKE+GDI+GTLRQ
Sbjct: 311 LQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNTISTVREYYKESGDIDGTLRQ 370
Query: 1303 LPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVD 1482
LPR+LVAEKAI+Q L++SPGN+LQALKAIPRTLRMMYVHSYQSYLWNHAASMR++K+G D
Sbjct: 371 LPRYLVAEKAILQSLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFD 430
Query: 1483 QVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVT 1662
QVVLGDLVY KE KE + +E ED + N+ + +LDEISETD+PEE VK +
Sbjct: 431 QVVLGDLVYSKEDYKVKE--SFVAECEDVNDNNMDDYSNLDEISETDLPEERNIPVKVIN 488
Query: 1663 EEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSM 1842
EEDL +GTY +DDV+LPL GSRVIYP NDIGEVY DLA+KD I+L E+AH IKEFSIT+M
Sbjct: 489 EEDLKSGTYTIDDVLLPLSGSRVIYPSNDIGEVYRDLAQKDGISLTETAHKIKEFSITNM 548
Query: 1843 TGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGNGKGRHEDAIDN 2022
TG YRRVFQK KDFEWE+L+Y DG +PLAETDFDVI KS ++ G E D+
Sbjct: 549 TGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIAKSVKSKVIEEVPSNGSKELPADS 608
Query: 2023 EEQSVS---FPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLPASC 2193
SV G + + + +NE G +Q+E S S + +E+Q ALKLSFTLPASC
Sbjct: 609 SAISVGGDMLSGKVCEETINNEAG------MQSEKSQ-SGGNAEESQMALKLSFTLPASC 661
Query: 2194 YATMAIRELLKTSTSVAFHKTLN 2262
YATMA+RELLKTSTSVAFHK+LN
Sbjct: 662 YATMAVRELLKTSTSVAFHKSLN 684
Score = 165 bits (417), Expect(2) = 0.0
Identities = 82/120 (68%), Positives = 98/120 (81%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE 430
MK++DESDVGI CYIS LPGFRGILKQRYSDFIVNEVDL+ VV L SL AP E + K+
Sbjct: 1 MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLNSLEAPKECSENKD 60
Query: 431 VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 610
V +SD+ N+SY EI+SFR++AG+SDAD LK FID++ G +V+ E IVLSPSSDKSHRT
Sbjct: 61 VNISDQLNRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHRT 120
>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
Length = 693
Score = 739 bits (1908), Expect(2) = 0.0
Identities = 389/567 (68%), Positives = 443/567 (78%), Gaps = 7/567 (1%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGSESWPESLGKF 762
KF + GPDT+SKCIRVRLN G +H S+KRK+R DKP+DSRGS++W E +GKF
Sbjct: 131 KFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGSDNWSEHVGKF 190
Query: 763 LRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN 942
LRFHL+KENKDTQEA+G+IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQ A+RLAALN
Sbjct: 191 LRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAALN 250
Query: 943 ERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFG 1122
ERLIGIK+GDFCHV EGLVLGQL GNRFTITLRGVVA+SE+ IK S +AL + GFINYFG
Sbjct: 251 ERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFG 310
Query: 1123 LQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQ 1302
LQRFGS SVPTHLIGA LLRGEW+ AV LILDPREG+ + + REYYKE+ DIEGTLRQ
Sbjct: 311 LQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGDI-LLLKAREYYKESDDIEGTLRQ 369
Query: 1303 LPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVD 1482
PRHLVAE+AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAASMR++ YG
Sbjct: 370 FPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTK 429
Query: 1483 QVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVT 1662
QVVLGDLVY K A K SE +D +D + H DEISETD+PEE VKA+
Sbjct: 430 QVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALD 489
Query: 1663 EEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSM 1842
EDL G Y +DDVVLPLPGSR IYP NDI +VYHD AKKD+I+L ESAHS+KEFSIT+M
Sbjct: 490 AEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNM 549
Query: 1843 TGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR-----SAEQANLGNGKGRHE 2007
TGG+RRVFQK DFEWE+LTY +GN+PLAETD+D I KS+ E + GN K E
Sbjct: 550 TGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEK---E 606
Query: 2008 DAIDNEEQSVSFPGSLKDSSKDNE-GGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLP 2184
++ +QS SF ++ S+ +NE G G Q E S E Q ALKLSFTLP
Sbjct: 607 NSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVE--PQFESGAPEAQRALKLSFTLP 664
Query: 2185 ASCYATMAIRELLKTSTSVAFHKTLNT 2265
ASCYATMAIRELLKTSTSVAF KTLNT
Sbjct: 665 ASCYATMAIRELLKTSTSVAFQKTLNT 691
Score = 157 bits (396), Expect(2) = 0.0
Identities = 77/120 (64%), Positives = 94/120 (78%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE 430
MK L+ESDVGI YIS+LPGFRGILKQRY DFIVNEVD +G VV LTSL APPE +++ E
Sbjct: 1 MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60
Query: 431 VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 610
K+SD+ NK Y +EI+ FR++ GDSD + LK ID++ G+E + PIVLS SSDKSHRT
Sbjct: 61 TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120
>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
[Citrus sinensis]
Length = 739
Score = 743 bits (1918), Expect(2) = 0.0
Identities = 384/567 (67%), Positives = 446/567 (78%), Gaps = 8/567 (1%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMG---NTHGRDGSKKRKNRDDKPYDSRGSESWPESLG 756
KF + GPD +SKCIRVRLN G N+ GR+ SKKRK R D P+DSRGSE+WPE LG
Sbjct: 178 KFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRN-SKKRKERGDNPFDSRGSENWPEQLG 236
Query: 757 KFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAA 936
KFLRFHL+KENKDTQEALG+I KMLGI PRSFGFAGTKDKRSVSTQRVTVFKQRAS+LAA
Sbjct: 237 KFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAA 296
Query: 937 LNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINY 1116
LN+RLIGI+LGDFC+V EGL+LGQL GNRFTITLRGVV +SED+IK S N+L + GFINY
Sbjct: 297 LNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINY 356
Query: 1117 FGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTL 1296
FGLQRFGS SVPTHL+GATLLRGEWK+AV +ILDPREGE+ I + REYYKET DI+GTL
Sbjct: 357 FGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYKETDDIDGTL 416
Query: 1297 RQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYG 1476
R+LPRHLVAE+AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQS+LWNHAAS R++K+G
Sbjct: 417 RKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHG 476
Query: 1477 VDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKA 1656
+ VV+GDLV+ K KE+G E E SSND + HLDE+ ETD P+ + VK
Sbjct: 477 TEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKT 536
Query: 1657 VTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSIT 1836
VT ED+++G Y +DDVVLPLPGSRVIYP ND+ EVYH LA+KD INL ES H++KEFSIT
Sbjct: 537 VTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSIT 596
Query: 1837 SMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSA-----EQANLGNGKGR 2001
SMTG YRRVFQK DFEWE+LTY DGN PLAETD D I K + A E+A GN K
Sbjct: 597 SMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNKK-- 654
Query: 2002 HEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTL 2181
+D D +QS S +K S+++NE + Q + +D+Q Q ALKL TL
Sbjct: 655 -KDPSDCMKQSESLSKDIKLSTENNEAACAKE-VKQPHVESVCGADSQGKQMALKLGLTL 712
Query: 2182 PASCYATMAIRELLKTSTSVAFHKTLN 2262
P+SCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 713 PSSCYATMAIRELLKTSTSVAFHKTLN 739
Score = 150 bits (380), Expect(2) = 0.0
Identities = 79/128 (61%), Positives = 100/128 (78%), Gaps = 3/128 (2%)
Frame = +2
Query: 236 ISSSRMKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPE- 412
++++ MK++DESD GILC+IS LPGFRGILKQRY DFIVNEVD + KVV LTSL PPE
Sbjct: 40 LTTTTMKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEE 99
Query: 413 -LVDEKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGV-EVNIEPIVLSP 586
V+ E K SD+ N+SY +EI+SFR++AGDSDA L+T I+++ G E +I PIVLS
Sbjct: 100 AAVEHNETKASDQLNRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSA 159
Query: 587 SSDKSHRT 610
+SDKSHRT
Sbjct: 160 NSDKSHRT 167
>gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
Length = 732
Score = 728 bits (1880), Expect(2) = 0.0
Identities = 376/557 (67%), Positives = 437/557 (78%), Gaps = 7/557 (1%)
Frame = +1
Query: 613 GPDTTSKCIRVRLNMGNTHGRDGSKKRKNRDDKPYDSRGSESWPESLGKFLRFHLHKENK 792
GPD++SKCIRVRLN GN + SKKRK R DKPYDSRGS WPE LGKFLRFHL+KENK
Sbjct: 182 GPDSSSKCIRVRLNSGNNNKGRNSKKRKERGDKPYDSRGSSHWPEHLGKFLRFHLYKENK 241
Query: 793 DTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNERLIGIKLGD 972
DTQEALG+IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQ ASRLAALNERLIGIK+GD
Sbjct: 242 DTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGD 301
Query: 973 FCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFGLQRFGSSSVP 1152
FC+V + +LGQL GNRFTI LRG+VA+SE+ IK SV +L + GFINYFGLQRFGS S+P
Sbjct: 302 FCYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIP 361
Query: 1153 THLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQLPRHLVAEKA 1332
TH IGATLLRGEW+AA ILDPREGE++ + + REYYKETGDIEGTLRQLPRHLVAE+A
Sbjct: 362 THRIGATLLRGEWQAAASTILDPREGERDFVSKAREYYKETGDIEGTLRQLPRHLVAERA 421
Query: 1333 IMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVDQVVLGDLVYW 1512
++QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAASMR+EKYG ++VVLGDLVY
Sbjct: 422 MLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVYC 481
Query: 1513 KEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVTEEDLSAGTYN 1692
K A K + SE ED + D + LDEIS TD+PE + VKA+T D+S G Y
Sbjct: 482 KGNDAEK-VKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGNYT 540
Query: 1693 VDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSMTGGYRRVFQK 1872
++DVVLP+PGSR+IYP NDI VYHD+AKKD I+L ES H+IKEFSITSMTG YRRVFQK
Sbjct: 541 IEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQK 600
Query: 1873 LKDFEWEMLTYRDGNVPLAETDFDVIVKSRSA----EQANLGNGKGRHEDAIDNEEQSVS 2040
DFEWE+L+Y DG++ L+ETD D I K++ E+ +G +D+ D+ E S
Sbjct: 601 PIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEG--QDSSDHMEHIES 658
Query: 2041 FPGSLKDSSKDNEGGSDRTGFVQTE---ISDGSRSDNQETQTALKLSFTLPASCYATMAI 2211
F +D K + G + G + E I S++ TQ ALKL+FTLPASCYATMAI
Sbjct: 659 F----EDDKKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAI 714
Query: 2212 RELLKTSTSVAFHKTLN 2262
RELLKTSTSVAFHKTLN
Sbjct: 715 RELLKTSTSVAFHKTLN 731
Score = 160 bits (405), Expect(2) = 0.0
Identities = 86/131 (65%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = +2
Query: 230 PEISSSR----MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSL 397
P I SS M ++ ESDVGILC+IS LPGFRGILKQRYSDFIVNEVD EG VV LTSL
Sbjct: 32 PVIKSSNSLTLMTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSL 91
Query: 398 VAPPELVDEKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIV 577
APPE V E E K D+ NK Y +EI FR++AGD+DAD L+ FI++I G E +I PIV
Sbjct: 92 DAPPEAVQEGETKTPDQLNKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPIV 151
Query: 578 LSPSSDKSHRT 610
LSP SDKSHRT
Sbjct: 152 LSPDSDKSHRT 162
>gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus notabilis]
Length = 784
Score = 714 bits (1844), Expect(2) = 0.0
Identities = 372/556 (66%), Positives = 435/556 (78%), Gaps = 4/556 (0%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMG--NTHGRDGSKKRKNRDDKPYDSRGSESWPESLGK 759
KF + GPD +SKCIRVRLN G N HGR+ SKKRK R DKP+D RGS+ WPE +GK
Sbjct: 190 KFLVTDTVDGPDASSKCIRVRLNSGRHNNHGRN-SKKRKERGDKPFDRRGSDDWPEHVGK 248
Query: 760 FLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAAL 939
FLRFHL+KENKD+QEALG+IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAAL
Sbjct: 249 FLRFHLYKENKDSQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAAL 308
Query: 940 NERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYF 1119
N+RLIGI++GDFC+V E LVLGQL GNRFT+TLRGVVA+SE+ IK S +AL ++GFINYF
Sbjct: 309 NDRLIGIQVGDFCYVKEELVLGQLSGNRFTVTLRGVVADSEETIKASASALGRRGFINYF 368
Query: 1120 GLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGE--KEAIRRVREYYKETGDIEGT 1293
GLQRFGS SVPT+LIGA L RGEWK AV +ILDPREG+ + I + REYYKET DI+GT
Sbjct: 369 GLQRFGSGSVPTYLIGAMLFRGEWKDAVHMILDPREGDILLDVITKAREYYKETNDIDGT 428
Query: 1294 LRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKY 1473
LRQLPRHLVAE AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAAS R++KY
Sbjct: 429 LRQLPRHLVAENAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASTRVQKY 488
Query: 1474 GVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVK 1653
G DQVV+GDLV+ KE K GTA ++ +D SN +DE+S ++PEE + VK
Sbjct: 489 GTDQVVVGDLVFCKEHNIEKVKGTASADCKDEDSNAIFGSHDIDEVSGAELPEERNNPVK 548
Query: 1654 AVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSI 1833
V ED+ AG + +DDVVLPLPGSRVI P NDI +VYHDLAKKD+I+L ESAH++KEFSI
Sbjct: 549 VVAAEDILAGNFAIDDVVLPLPGSRVILPTNDIAQVYHDLAKKDAISLTESAHNVKEFSI 608
Query: 1834 TSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGNGKGRHEDA 2013
TSMTG YRRVFQK D+EWE+LTY +G +PLAETD D+I KS+ A A G E
Sbjct: 609 TSMTGSYRRVFQKPVDYEWELLTYTNGTIPLAETDLDIIAKSKPAHVAEENEVNGNEE-- 666
Query: 2014 IDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLPASC 2193
+ ++S + DN+ +R +Q E + G+ S QE Q ALKLSFTLPASC
Sbjct: 667 --STKRSKRVENEAVLQTDDNKVDGEREAELQAESTCGTNS--QEPQMALKLSFTLPASC 722
Query: 2194 YATMAIRELLKTSTSV 2241
YATMAIRELLKTSTSV
Sbjct: 723 YATMAIRELLKTSTSV 738
Score = 159 bits (401), Expect(2) = 0.0
Identities = 80/123 (65%), Positives = 94/123 (76%)
Frame = +2
Query: 242 SSRMKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVD 421
++ MK+LDESDVGI CYIS LPGFRGILKQRYSDFIVNEVD +G VV LTSL APPE +
Sbjct: 57 TTAMKTLDESDVGIFCYISNLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLDAPPETRE 116
Query: 422 EKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKS 601
E + D KSY +EI+SFR +AGDSDA+ L+ I++I G + PIVLSPSSDKS
Sbjct: 117 ETRTETIDAGTKSYTSEIESFRCLAGDSDAESLEALINQINSGGGEEVSPIVLSPSSDKS 176
Query: 602 HRT 610
HRT
Sbjct: 177 HRT 179
>ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
gi|557535111|gb|ESR46229.1| hypothetical protein
CICLE_v10003382mg [Citrus clementina]
Length = 697
Score = 719 bits (1857), Expect(2) = 0.0
Identities = 375/561 (66%), Positives = 439/561 (78%), Gaps = 8/561 (1%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMG---NTHGRDGSKKRKNRDDKPYDSRGSESWPESLG 756
KF + GPD +SKCIRVRLN G N+ GR+ SKKRK R D P+DSRGSE+WPE LG
Sbjct: 134 KFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRN-SKKRKERGDNPFDSRGSENWPEQLG 192
Query: 757 KFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAA 936
KFLRFHL+KENKDTQEALG+I KMLGI PRSFGFAGTKDKRSVSTQRVTVFKQRAS+LAA
Sbjct: 193 KFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAA 252
Query: 937 LNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINY 1116
LN+RLIGI+LGDFC+V EGL+LGQL GNRFTITLRGVV +SED+IK S N+L + GFINY
Sbjct: 253 LNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINY 312
Query: 1117 FGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTL 1296
FGLQRFGS SVPTHL+GATLLRGEWK+AV +ILDPREG+ + + REYYKET DI+GTL
Sbjct: 313 FGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGDI-LLFKAREYYKETDDIDGTL 371
Query: 1297 RQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYG 1476
R+LPRHLVAE+AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQS+LWNHAAS R++K+G
Sbjct: 372 RKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHG 431
Query: 1477 VDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKA 1656
+ VV+GDLV+ K KE+G E E SSND + HLDE+ ETD P+ + VK
Sbjct: 432 TEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKT 491
Query: 1657 VTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSIT 1836
VT ED+++G Y +DDVVLPLPGSRVIYP ND+ EVYH LA+KD INL ES H++KEFSIT
Sbjct: 492 VTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSIT 551
Query: 1837 SMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSA-----EQANLGNGKGR 2001
SMTG YRRVFQK DFEWE+LTY DGN PLAETD D I K + A E+A GN K
Sbjct: 552 SMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNKK-- 609
Query: 2002 HEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTL 2181
+D D +QS S +K S+++NE + Q + +D+Q Q ALKL TL
Sbjct: 610 -KDPSDCMKQSESLSKDIKLSTENNEAACAKE-VKQPHVESVCGADSQGKQMALKLGLTL 667
Query: 2182 PASCYATMAIRELLKTSTSVA 2244
P+SCYATMAIRELLKTSTSV+
Sbjct: 668 PSSCYATMAIRELLKTSTSVS 688
Score = 149 bits (376), Expect(2) = 0.0
Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPE--LVDE 424
MK++DESD GILC+IS LPGFRGILKQRY DFIVNEVD + KVV LTSL PPE V+
Sbjct: 1 MKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEAAVEH 60
Query: 425 KEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGV-EVNIEPIVLSPSSDKS 601
E K SD+ N+SY +EI+SFR++AGDSDA L+T I+++ G E +I PIVLS +SDKS
Sbjct: 61 NETKASDQLNRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSANSDKS 120
Query: 602 HRT 610
HRT
Sbjct: 121 HRT 123
>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 693
Score = 727 bits (1877), Expect(2) = 0.0
Identities = 376/569 (66%), Positives = 445/569 (78%), Gaps = 10/569 (1%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGSESWPESLGKF 762
KF + GPD +SKCIRVRLN G +GR SKKRK R DKP+DSRG + W E +GKF
Sbjct: 130 KFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDDWSEHVGKF 189
Query: 763 LRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN 942
LRFHL KENKDTQEALGVIGKMLGIQPR+FGFAGTKDKR+V+ QRVTVFKQ ASRLAALN
Sbjct: 190 LRFHLFKENKDTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFASRLAALN 249
Query: 943 ERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFG 1122
+RLIGIK+GDFC+V EGL LGQL GNRFTITLRGVVA+SEDII+ S NAL KQGF+NYFG
Sbjct: 250 DRLIGIKVGDFCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGFVNYFG 309
Query: 1123 LQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQ 1302
LQRFGS S+PTHLIGA+LLRGEWK+ V ++L+PREGE++ I R+YYKE+ DI+GTLR+
Sbjct: 310 LQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDIDGTLRK 369
Query: 1303 LPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVD 1482
LPR+LVAE+A++QCL+K PGN+ QALKA+PRTLRMMYVHSYQSYLWNHAASMR++KYG D
Sbjct: 370 LPRYLVAERAVLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTD 429
Query: 1483 QVVLGDLVYWKEQCAGKEIGTAYSEREDGSSN-----DTQNPDHLDEISETDMPEETISF 1647
+VV+GDLVY K K G SE D + N DT +P+HLD+ISET++PE +S
Sbjct: 430 RVVVGDLVYCKGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETNVPEARVSL 489
Query: 1648 VKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEF 1827
VKAVT ED++ GTY +DD+VLPLPGSRVI+P+NDI V+HDLAKKD I+L ES H++KEF
Sbjct: 490 VKAVTAEDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTESVHNVKEF 549
Query: 1828 SITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR----SAEQANLGNGK 1995
SIT++TG YRRVFQK DFEW++L Y DGN+PL ETDF+ I K++ + E +G
Sbjct: 550 SITNVTGSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKEYPTGVSGD 609
Query: 1996 GRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSF 2175
G D I E SV+ ++ KDNE S+ E G Q TQ ALKLSF
Sbjct: 610 GSLHDRIKQSECSVN---DVQLPKKDNEVESEGEKLPHVESLGGPIP--QGTQIALKLSF 664
Query: 2176 TLPASCYATMAIRELLKTSTSVAFHKTLN 2262
TLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 665 TLPASCYATMAIRELLKTSTSVAFHKTLN 693
Score = 140 bits (353), Expect(2) = 0.0
Identities = 69/115 (60%), Positives = 82/115 (71%)
Frame = +2
Query: 266 ESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKEVKVSD 445
ES+VGI CYIS LPGFRGILKQRYSDF+VNEVD+EG VV LT+L APPE+V E K D
Sbjct: 5 ESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAKTED 64
Query: 446 EPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 610
+K Y AEI+ FR +A D + L+ FI ++ G E + PIVLSP DK HRT
Sbjct: 65 AASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRT 119
>gb|EOY11113.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
cacao]
Length = 763
Score = 715 bits (1845), Expect(2) = 0.0
Identities = 376/575 (65%), Positives = 437/575 (76%), Gaps = 25/575 (4%)
Frame = +1
Query: 613 GPDTTSKCIRVRLNMGNTHGRDGSKKRKNRDDKPYDSRGSESWPESLGKFLRFHLHKENK 792
GPD++SKCIRVRLN GN + SKKRK R DKPYDSRGS WPE LGKFLRFHL+KENK
Sbjct: 195 GPDSSSKCIRVRLNSGNNNKGRNSKKRKERGDKPYDSRGSSHWPEHLGKFLRFHLYKENK 254
Query: 793 DTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNERLIGIKLGD 972
DTQEALG+IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQ ASRLAALNERLIGIK+GD
Sbjct: 255 DTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGD 314
Query: 973 FCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFGLQRFGSSSVP 1152
FC+V + +LGQL GNRFTI LRG+VA+SE+ IK SV +L + GFINYFGLQRFGS S+P
Sbjct: 315 FCYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIP 374
Query: 1153 THLIGATLLRGEWKAAVDLILDPREGEKEAI------------------RRVREYYKETG 1278
TH IGATLLRGEW+AA ILDPREG+ ++ +R REYYKETG
Sbjct: 375 THRIGATLLRGEWQAAASTILDPREGDILSLTFFFPFLLGKALFRCLTTQRAREYYKETG 434
Query: 1279 DIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASM 1458
DIEGTLRQLPRHLVAE+A++QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAASM
Sbjct: 435 DIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASM 494
Query: 1459 RIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEET 1638
R+EKYG ++VVLGDLVY K A K + SE ED + D + LDEIS TD+PE
Sbjct: 495 RVEKYGSNEVVLGDLVYCKGNDAEK-VKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGK 553
Query: 1639 ISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSI 1818
+ VKA+T D+S G Y ++DVVLP+PGSR+IYP NDI VYHD+AKKD I+L ES H+I
Sbjct: 554 NNLVKAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNI 613
Query: 1819 KEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSA----EQANLG 1986
KEFSITSMTG YRRVFQK DFEWE+L+Y DG++ L+ETD D I K++ E+
Sbjct: 614 KEFSITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTD 673
Query: 1987 NGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTE---ISDGSRSDNQETQT 2157
+G +D+ D+ E SF +D K + G + G + E I S++ TQ
Sbjct: 674 GTEG--QDSSDHMEHIESF----EDDKKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQK 727
Query: 2158 ALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2262
ALKL+FTLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 728 ALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLN 762
Score = 152 bits (383), Expect(2) = 0.0
Identities = 86/144 (59%), Positives = 99/144 (68%), Gaps = 17/144 (11%)
Frame = +2
Query: 230 PEISSSR----MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSL 397
P I SS M ++ ESDVGILC+IS LPGFRGILKQRYSDFIVNEVD EG VV LTSL
Sbjct: 32 PVIKSSNSLTLMTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSL 91
Query: 398 VAPPEL-------------VDEKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDK 538
APPE+ V E E K D+ NK Y +EI FR++AGD+DAD L+ FI++
Sbjct: 92 DAPPEVMIDVFSLNKFTQAVQEGETKTPDQLNKCYASEIIKFRSLAGDTDADRLEAFINQ 151
Query: 539 IGPGVEVNIEPIVLSPSSDKSHRT 610
I G E +I PIVLSP SDKSHRT
Sbjct: 152 ITSGSEEDICPIVLSPDSDKSHRT 175
>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
gi|550338143|gb|ERP60572.1| hypothetical protein
POPTR_0005s05300g [Populus trichocarpa]
Length = 752
Score = 717 bits (1851), Expect(2) = 0.0
Identities = 379/569 (66%), Positives = 439/569 (77%), Gaps = 10/569 (1%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRDG--SKKRKNRDDKPYDSRGSESWPESLGK 759
KF + GPD +SKCIRVRL+ G H +G SKKRK R +KP+DSRGS +WPE LGK
Sbjct: 190 KFLVTDTTDGPDASSKCIRVRLDSGG-HKNNGRNSKKRKERGEKPFDSRGSSNWPEHLGK 248
Query: 760 FLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAAL 939
FLRFHL+KENKDTQEALG+IGKMLGIQ +SFGFAGTKDKR+VSTQRVTVFKQ+ASRLAAL
Sbjct: 249 FLRFHLYKENKDTQEALGIIGKMLGIQSKSFGFAGTKDKRAVSTQRVTVFKQQASRLAAL 308
Query: 940 NERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYF 1119
N+RLIGIK+GDFCHV EGL+LG+L GNRFT+TLRGV+A+SED IK + ++L + GFINYF
Sbjct: 309 NDRLIGIKVGDFCHVKEGLLLGRLLGNRFTVTLRGVIADSEDTIKAAADSLGRHGFINYF 368
Query: 1120 GLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGE-----KEAIRRVREYYKETGDI 1284
GLQRFG+ SVPTHLIGA LLRGEWK AV +ILDPREG+ IR+ REYYKE+ DI
Sbjct: 369 GLQRFGTGSVPTHLIGAALLRGEWKTAVSMILDPREGDILLLFPYVIRKAREYYKESNDI 428
Query: 1285 EGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRI 1464
EGTLRQLPRHLVAE+A++QCL+K PG++LQA+KAIPRTLRMMYVH YQSYLWNHAAS R+
Sbjct: 429 EGTLRQLPRHLVAERAVLQCLKKCPGDYLQAMKAIPRTLRMMYVHGYQSYLWNHAASERV 488
Query: 1465 EKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETIS 1644
+KYG DQV+LGDLVY K + KE SE D + +DT + HLDE S TD+ E +
Sbjct: 489 QKYGFDQVLLGDLVYCKGDDSEKETVGVNSECNDDNCDDTYDCSHLDETSGTDLLERKNT 548
Query: 1645 FVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKE 1824
VK VT ED+S G Y VDDVVLP+PGSRVI+P N+I +VYHDLAKKD+INL ES H +KE
Sbjct: 549 LVKVVTVEDMSTGNYTVDDVVLPMPGSRVIFPTNEIAKVYHDLAKKDAINLTESVHRVKE 608
Query: 1825 FSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSA---EQANLGNGK 1995
FSITSMTG YRRVFQK DFEWE+LTY D N PLAETD D I K+ S +Q G G
Sbjct: 609 FSITSMTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDLDKISKTGSTNIIKQEEQGKG- 667
Query: 1996 GRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSF 2175
D D + V S+ SS NE S+R + E S S+ QETQ ALKLS
Sbjct: 668 DEDNDLSDCTKLPVCSRNSIALSSDTNE-ESER----EVESEQVSGSNWQETQMALKLSL 722
Query: 2176 TLPASCYATMAIRELLKTSTSVAFHKTLN 2262
TLPASCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 723 TLPASCYATMAIRELLKTSTSVAYHKTLN 751
Score = 142 bits (359), Expect(2) = 0.0
Identities = 76/126 (60%), Positives = 98/126 (77%), Gaps = 8/126 (6%)
Frame = +2
Query: 257 SLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE-- 430
S++ESDVGILCYIS+LPGFRGILKQRY+DFIVNEVD +G VV LT L PP++V+E +
Sbjct: 54 SMEESDVGILCYISQLPGFRGILKQRYADFIVNEVDTDGNVVHLTCLEPPPQMVEETKEC 113
Query: 431 -VKVSDE---PNKSYDAEIQSFRAVAGDSDADMLKTFIDKIG--PGVEVNIEPIVLSPSS 592
KVSDE +KSY+AEI+ FR++AGDSDA+ L++ I ++ G E ++ IVLSP S
Sbjct: 114 GAKVSDEKMSESKSYEAEIELFRSLAGDSDAEKLESLISQVDSCTGSEDSVPHIVLSPDS 173
Query: 593 DKSHRT 610
DK+HRT
Sbjct: 174 DKTHRT 179
>gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
Length = 691
Score = 716 bits (1849), Expect(2) = 0.0
Identities = 377/556 (67%), Positives = 436/556 (78%), Gaps = 4/556 (0%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMG--NTHGRDGSKKRKNRDDKPYDSRGSESWPESLGK 759
KF + GPD +SKCIRVR+N G N+ GR+ S+KRK R DKP+DSRGS+ W E++GK
Sbjct: 131 KFLVTDTVDGPDASSKCIRVRINSGGQNSRGRN-SRKRKERGDKPFDSRGSDDWSENVGK 189
Query: 760 FLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAAL 939
FLRFHL+KENKDTQEALG+I KMLGIQPRSFGFAGTKDKR+V+TQRVTVFKQ ASRLAAL
Sbjct: 190 FLRFHLYKENKDTQEALGIIAKMLGIQPRSFGFAGTKDKRAVTTQRVTVFKQLASRLAAL 249
Query: 940 NERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYF 1119
N+RLIGIK+GDFC+V EGLVLGQL GNRFTITLRGVVA+SED IK SV AL KQGFINYF
Sbjct: 250 NDRLIGIKVGDFCYVKEGLVLGQLLGNRFTITLRGVVADSEDTIKASVIALGKQGFINYF 309
Query: 1120 GLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGE--KEAIRRVREYYKETGDIEGT 1293
GLQRFGS SVPTHLIGATLLRGEWK+ V L LDPREG+ + REYYKET DIEGT
Sbjct: 310 GLQRFGSGSVPTHLIGATLLRGEWKSTVSLFLDPREGDILLMLLGIAREYYKETNDIEGT 369
Query: 1294 LRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKY 1473
LRQLPRHLV+EKAI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAASMR++KY
Sbjct: 370 LRQLPRHLVSEKAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKY 429
Query: 1474 GVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVK 1653
G D+VVLGDLVY K K S+ D + NDT +P LD+IS T++PEE ++ VK
Sbjct: 430 GTDRVVLGDLVYCKGNETEKVSEVVSSKCVDENGNDTLDPIDLDDISGTNLPEERLNLVK 489
Query: 1654 AVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSI 1833
AVT ED+ +G Y +DDVVLP+PGSRVI+P+NDI V+HDLAKKD+I+L ES H++KEFSI
Sbjct: 490 AVTAEDILSGNYTIDDVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLTESVHNVKEFSI 549
Query: 1834 TSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGNGKGRHEDA 2013
TSMTG YRRVFQK DFEWE+L Y DGN PL +TDFD I K++ + N GR
Sbjct: 550 TSMTGSYRRVFQKPMDFEWEILKYIDGNKPLVDTDFDKIAKTKPSSL----NEDGRLH-- 603
Query: 2014 IDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLPASC 2193
D +QS + + DN G+ G + ++ QETQTALKLSFTLPASC
Sbjct: 604 -DKTKQSECLDNDIGLQTDDN--GAKAKGEELPQAESLCDTNPQETQTALKLSFTLPASC 660
Query: 2194 YATMAIRELLKTSTSV 2241
YATMAIRELLKTSTSV
Sbjct: 661 YATMAIRELLKTSTSV 676
Score = 140 bits (352), Expect(2) = 0.0
Identities = 72/120 (60%), Positives = 86/120 (71%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE 430
MK+ +E DVGI CYIS+LPGFRGILKQRYSDF+VNEVD E VV LT+L AP E V E E
Sbjct: 1 MKTTEEPDVGIFCYISQLPGFRGILKQRYSDFMVNEVDTEENVVHLTNLDAPAETVKEIE 60
Query: 431 VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 610
K D +K Y EI+SFR++ DA+ L+ I++I G E +I PIVLSP DKSHRT
Sbjct: 61 TKTHDATSKDYTTEIESFRSLVDPDDAERLEAIINQINSGSEDSILPIVLSPDYDKSHRT 120
>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 701
Score = 712 bits (1839), Expect(2) = 0.0
Identities = 369/562 (65%), Positives = 438/562 (77%), Gaps = 10/562 (1%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGSESWPESLGKF 762
KF + GPD +SKCIRVRLN G +GR SKKRK R DKP+DSRG + W E +GKF
Sbjct: 130 KFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDDWSEHVGKF 189
Query: 763 LRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN 942
LRFHL KENKDTQEALGVIGKMLGIQPR+FGFAGTKDKR+V+ QRVTVFKQ ASRLAALN
Sbjct: 190 LRFHLFKENKDTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFASRLAALN 249
Query: 943 ERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFG 1122
+RLIGIK+GDFC+V EGL LGQL GNRFTITLRGVVA+SEDII+ S NAL KQGF+NYFG
Sbjct: 250 DRLIGIKVGDFCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGFVNYFG 309
Query: 1123 LQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQ 1302
LQRFGS S+PTHLIGA+LLRGEWK+ V ++L+PREGE++ I R+YYKE+ DI+GTLR+
Sbjct: 310 LQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDIDGTLRK 369
Query: 1303 LPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVD 1482
LPR+LVAE+A++QCL+K PGN+ QALKA+PRTLRMMYVHSYQSYLWNHAASMR++KYG D
Sbjct: 370 LPRYLVAERAVLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTD 429
Query: 1483 QVVLGDLVYWKEQCAGKEIGTAYSEREDGSSN-----DTQNPDHLDEISETDMPEETISF 1647
+VV+GDLVY K K G SE D + N DT +P+HLD+ISET++PE +S
Sbjct: 430 RVVVGDLVYCKGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETNVPEARVSL 489
Query: 1648 VKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEF 1827
VKAVT ED++ GTY +DD+VLPLPGSRVI+P+NDI V+HDLAKKD I+L ES H++KEF
Sbjct: 490 VKAVTAEDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTESVHNVKEF 549
Query: 1828 SITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR----SAEQANLGNGK 1995
SIT++TG YRRVFQK DFEW++L Y DGN+PL ETDF+ I K++ + E +G
Sbjct: 550 SITNVTGSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKEYPTGVSGD 609
Query: 1996 GRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSF 2175
G D I E SV+ ++ KDNE S+ E G Q TQ ALKLSF
Sbjct: 610 GSLHDRIKQSECSVN---DVQLPKKDNEVESEGEKLPHVESLGGPIP--QGTQIALKLSF 664
Query: 2176 TLPASCYATMAIRELLKTSTSV 2241
TLPASCYATMAIRELLKTSTSV
Sbjct: 665 TLPASCYATMAIRELLKTSTSV 686
Score = 140 bits (353), Expect(2) = 0.0
Identities = 69/115 (60%), Positives = 82/115 (71%)
Frame = +2
Query: 266 ESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKEVKVSD 445
ES+VGI CYIS LPGFRGILKQRYSDF+VNEVD+EG VV LT+L APPE+V E K D
Sbjct: 5 ESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAKTED 64
Query: 446 EPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 610
+K Y AEI+ FR +A D + L+ FI ++ G E + PIVLSP DK HRT
Sbjct: 65 AASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRT 119
>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
d, putative [Ricinus communis]
Length = 753
Score = 713 bits (1841), Expect(2) = 0.0
Identities = 377/572 (65%), Positives = 436/572 (76%), Gaps = 13/572 (2%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNM-GNTH-GRDGSKKRKNRDDKPYDSRGSESWPESLGK 759
KF + GPD +SKCIRVRLN GN + G SKKRK+R+DKP+DSRGS+ WPE LGK
Sbjct: 183 KFLVTDTVDGPDASSKCIRVRLNSRGNINEGNRNSKKRKDRNDKPFDSRGSDHWPEHLGK 242
Query: 760 FLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAAL 939
FLRFHL+KENKDTQEA+G+IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQ ASRLAAL
Sbjct: 243 FLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAAL 302
Query: 940 NERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYF 1119
N+RLIGIK+GDFC+VNEGL+LGQL GNRFT+TLRGVVA+SED IK S ++L + GFINYF
Sbjct: 303 NDRLIGIKVGDFCYVNEGLLLGQLLGNRFTVTLRGVVADSEDTIKGSADSLGRHGFINYF 362
Query: 1120 GLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAI-------RRVREYYKETG 1278
GLQRFGS SVPTHLIGA LLRGEWK AV +ILDPREG+ + R REYYKE+
Sbjct: 363 GLQRFGSGSVPTHLIGAALLRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYKESD 422
Query: 1279 DIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASM 1458
DI+GTLRQLPR+L AE+A++QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAASM
Sbjct: 423 DIDGTLRQLPRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASM 482
Query: 1459 RIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEET 1638
R++KYG DQVV+GDLVY K +EIG+A S ED D +LDE S TD+ E
Sbjct: 483 RVQKYGTDQVVVGDLVYCKGDDTEREIGSANSACEDDDCEDMYGCSNLDETSGTDLSERK 542
Query: 1639 ISFVK---AVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESA 1809
+ VK AV EDLS G Y ++DV+LP+PGSRV YP NDI +VYHDLA+KD+INL ES
Sbjct: 543 DTLVKVEQAVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVYHDLAEKDAINLAESV 602
Query: 1810 HSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAE-QANLG 1986
HS KEFSITSMTG YRRVFQK DFEWE+L+Y DG PLAETD + + K++S E
Sbjct: 603 HSAKEFSITSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETDMEKLAKAKSIELNKEEE 662
Query: 1987 NGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALK 2166
K + D Q +S L S++ N G + E G + + QTALK
Sbjct: 663 TKKNDTKSPSDCMRQPMSSGNDLHLSAEYNREGEREVEVAKVEPLYG--PNTRGAQTALK 720
Query: 2167 LSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2262
L+FTLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 721 LTFTLPASCYATMAIRELLKTSTSVAFHKTLN 752
Score = 139 bits (350), Expect(2) = 0.0
Identities = 72/124 (58%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELV---D 421
M +++ESDVGI CYIS++PGFRGILKQRYSDFIVNEVD G VV LTSL P E+V +
Sbjct: 49 MTTIEESDVGISCYISKVPGFRGILKQRYSDFIVNEVDNNGNVVHLTSLHVPREIVEVAE 108
Query: 422 EKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDK-IGPGVEVNIEPIVLSPSSDK 598
E+E +++++ K+Y AEI+SFR +AGD+D L+ FI++ I +NI PI+LSP SDK
Sbjct: 109 EREEEITNQVGKNYAAEIESFRELAGDADTQRLEAFINQVISEDNCINISPILLSPDSDK 168
Query: 599 SHRT 610
+HRT
Sbjct: 169 AHRT 172
>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
sativus]
Length = 719
Score = 699 bits (1805), Expect(2) = 0.0
Identities = 361/568 (63%), Positives = 444/568 (78%), Gaps = 9/568 (1%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMG--NTHGRDGSKKRKNRDDKPYDSRGSESWPESLGK 759
KF + GPD++SKC+RVR++ G N GR SKKRK R DKP+DSRGS++WPE +GK
Sbjct: 170 KFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRF-SKKRKERGDKPFDSRGSDNWPEHVGK 228
Query: 760 FLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAAL 939
FLRFHL+KENKDTQEALG+IGKMLGIQ RSFGFAGTKDKRS+STQRVTVFKQ ASR+AAL
Sbjct: 229 FLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAAL 288
Query: 940 NERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYF 1119
N+RLIGIKLG+F ++ EGL+LGQL GNRFTITLRGVVA SED+IK S AL + GFINYF
Sbjct: 289 NDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVANSEDVIKASAEALGRHGFINYF 348
Query: 1120 GLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLR 1299
GLQRFGS SVPTHL+GA+LLRGEWK AV++ILDPREG+ + R R+YYKE+ DI+GTL+
Sbjct: 349 GLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGDILLLMRARDYYKESDDIDGTLK 408
Query: 1300 QLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGV 1479
QLPR+LVAE+AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAASMR++KYG+
Sbjct: 409 QLPRYLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 468
Query: 1480 DQVVLGDLVYWKE---QCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFV 1650
D+VV+GDLVY KE + A + Y + + G +N + + HL+E+ + +P E V
Sbjct: 469 DKVVVGDLVYCKENHTETAAVQNSEEYEDEDCGDAN-SYDSCHLEEVCKLGLPTERHKLV 527
Query: 1651 KAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFS 1830
KAVT D+ +G + +DDVVLPLPGSRV+YP NDI EVY+DLA KDSI+L S H++KEFS
Sbjct: 528 KAVTAGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDSISLTNSVHNVKEFS 587
Query: 1831 ITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGN--GKGRH 2004
ITSMTG YRRVFQ+ KD+EWE+++Y D N+PLA++D ++KS+S E + K ++
Sbjct: 588 ITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSVEISKEEKIADKSKN 647
Query: 2005 EDAIDNEEQSVSFPGS--LKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFT 2178
ED++D+ +QSV + L+ K+NE G Q+ Q ALKLSFT
Sbjct: 648 EDSLDSTDQSVCCKKNIQLEAGGKENENG----------------QGTQDPQMALKLSFT 691
Query: 2179 LPASCYATMAIRELLKTSTSVAFHKTLN 2262
LPAS YATMAIRELLKTSTSVAFHKTLN
Sbjct: 692 LPASSYATMAIRELLKTSTSVAFHKTLN 719
Score = 142 bits (357), Expect(2) = 0.0
Identities = 74/120 (61%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
Frame = +2
Query: 254 KSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPE-LVDEKE 430
KS+ ESDVGIL YIS LPGFRGILKQRYSDFIVNEVD +G VV LTSL APPE +V E
Sbjct: 41 KSVGESDVGILSYISSLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESG 100
Query: 431 VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 610
+ ++SY +EI+ FR++AGDSDA++L+ F+ +I GV +I PIV SP +DK+HRT
Sbjct: 101 PTIVHSTSQSYASEIELFRSLAGDSDAEILEIFLKQINSGVNDDILPIVFSPDTDKTHRT 160
>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
[Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
hypothetical protein At3g04820 [Arabidopsis thaliana]
gi|332640619|gb|AEE74140.1| pseudouridine synthase
[Arabidopsis thaliana]
Length = 715
Score = 709 bits (1831), Expect(2) = 0.0
Identities = 366/565 (64%), Positives = 434/565 (76%), Gaps = 6/565 (1%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRDG-SKKRKNRDDKPYDSRGSESWPESLGKF 762
KF + GPD+TSKCIRVR+N G + R SKKRK R DKP+DSRGSE WPE +GKF
Sbjct: 169 KFLVTDTVDGPDSTSKCIRVRVNSGANNNRGNRSKKRKERGDKPFDSRGSEHWPEHVGKF 228
Query: 763 LRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN 942
LRFHL+KENKDTQEALG+IGKMLG+QP+SFGF+GTKDKRSVSTQRVTVFKQ+AS+LAALN
Sbjct: 229 LRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALN 288
Query: 943 ERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFG 1122
+RL GIK+GDFC+V EGL+LGQL GNRFTITLRGVVA+SE+ IK+S +L K GFINYFG
Sbjct: 289 KRLFGIKVGDFCNVKEGLLLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINYFG 348
Query: 1123 LQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQ 1302
LQRFGS SVPTH +GA LL+GEWK AVD+ILDPRE E+ + REYYKETGDI+GTLRQ
Sbjct: 349 LQRFGSGSVPTHHVGAALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQ 408
Query: 1303 LPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVD 1482
LPR+LVAE+AI+QCL+K PGN+LQALK IPRTLRMMYVHSYQSYLWN+AAS+R++ YG
Sbjct: 409 LPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGTS 468
Query: 1483 QVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVT 1662
QVVLGDLV K A + + + SE + SS + + D +D+ + D+P E VK V+
Sbjct: 469 QVVLGDLVSTKVDAAKRMVDSLTSEHNE-SSEEALDCDQVDDTAVVDLPAERSDLVKVVS 527
Query: 1663 EEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSM 1842
EDL AGTY+ D+VLPLPGSRVIYP NDI E+YHDLAKKD I+L ES H +KEFSITSM
Sbjct: 528 IEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSM 587
Query: 1843 TGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGNGKGRHEDAIDN 2022
TGGYRRVFQK DFEWE+LTY D N PLAETD D I ++ E+ G E+ D
Sbjct: 588 TGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRIPMNKPVEKV------GSTEEIEDE 641
Query: 2023 EEQSVSFP-----GSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLPA 2187
+S + P +LKD + NE D TG D+++TQ ALK++ TLP+
Sbjct: 642 SMKSDTNPHDSGETNLKDQTDSNEAEKD-TG----------NPDSEQTQMALKMALTLPS 690
Query: 2188 SCYATMAIRELLKTSTSVAFHKTLN 2262
SCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 691 SCYATMAIRELLKTSTSVAYHKTLN 715
Score = 131 bits (330), Expect(2) = 0.0
Identities = 63/122 (51%), Positives = 92/122 (75%), Gaps = 2/122 (1%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELV--DE 424
MK++DE+DVGI C+IS+LPGFRGILKQRY+DFIVNEVD++G VV LTSL PPE+ +E
Sbjct: 37 MKTVDEADVGISCFISQLPGFRGILKQRYADFIVNEVDMDGNVVHLTSLDLPPEMAVKEE 96
Query: 425 KEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSH 604
+ K D ++Y + ++SF++++ +DA+ L+ I+++ G + + P+VL PSSDKS
Sbjct: 97 DKAKSCDNVPQNYTSAVESFKSISSVTDAERLEILINQVTSGTDGEVLPVVLDPSSDKSK 156
Query: 605 RT 610
RT
Sbjct: 157 RT 158
>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
Length = 690
Score = 674 bits (1738), Expect(2) = 0.0
Identities = 348/555 (62%), Positives = 421/555 (75%), Gaps = 5/555 (0%)
Frame = +1
Query: 613 GPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGSESWPESLGKFLRFHLHKEN 789
GPD +SKCIRVRLN + + SKKRK R DKP+DSRGSE+WP+++GKFLRFHL+KEN
Sbjct: 144 GPDASSKCIRVRLNSAEPNNKGKNSKKRKERGDKPFDSRGSENWPKNVGKFLRFHLYKEN 203
Query: 790 KDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNERLIGIKLG 969
KDT EALGVIG ML +QP+SFGFAGTKDKR+V+TQRVTV+KQRASRLA+LN+RL GIKLG
Sbjct: 204 KDTHEALGVIGNMLSVQPKSFGFAGTKDKRAVTTQRVTVYKQRASRLASLNKRLFGIKLG 263
Query: 970 DFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFGLQRFGSSSV 1149
DFC+V EGL LGQL GNRFTITLRG+VA+SEDIIK S +AL + GFINYFGLQRFGS S+
Sbjct: 264 DFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFGLQRFGSGSL 323
Query: 1150 PTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQLPRHLVAEK 1329
PTHLIGA LL+GEWK AVD+ILDPR+GEK AI + R+YYKE+ D+ GTL+QLPR+LVAE+
Sbjct: 324 PTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAER 383
Query: 1330 AIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVDQVVLGDLVY 1509
A++Q L+ SPGN+LQALK+IPRTLRM+YVHSYQSYLWNHAAS R++KYG + VVLGDLVY
Sbjct: 384 AVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVY 443
Query: 1510 WKEQCAGK---EIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVTEEDLSA 1680
KE GK +G+ Y+E G + + EI E I VK V EDL++
Sbjct: 444 CKENSTGKVTESVGSEYAEDCSGRYDSNNEDEISGEI------HEEIDSVKVVDVEDLNS 497
Query: 1681 GTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSMTGGYRR 1860
G Y +DDV+LP+PGSR+ YP N I VY DLAKKD I+L ES H++++FSITS+TG YRR
Sbjct: 498 GYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYRR 557
Query: 1861 VFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR-SAEQANLGNGKGRHEDAIDNEEQSV 2037
VFQK +FEWE+LTY D N L ETD D + KS+ +G G++E+A D +
Sbjct: 558 VFQKPINFEWELLTYSDSNKQLVETDLDKVNKSKPMGTVKQMGAANGKNEEAFDCIRELE 617
Query: 2038 SFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLPASCYATMAIRE 2217
S +K + G + E GS S Q++Q ALKLSFTLPASCYATMAIRE
Sbjct: 618 SSNDVVKVENYSEIAG-EEIKLPHDESLSGSSS--QDSQIALKLSFTLPASCYATMAIRE 674
Query: 2218 LLKTSTSVAFHKTLN 2262
LLKTSTSVA+HKTLN
Sbjct: 675 LLKTSTSVAYHKTLN 689
Score = 134 bits (337), Expect(2) = 0.0
Identities = 73/122 (59%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAP---PELVD 421
MK+ +E +VGI C+IS LPGFRGILKQRYSDFIVNEVD +G VV+L+SL AP PE
Sbjct: 3 MKTAEEHEVGISCFISDLPGFRGILKQRYSDFIVNEVDRDGTVVQLSSLDAPQEEPESSQ 62
Query: 422 EKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKS 601
E SD SY ++I+SF+++AGDSDA +L+ FI+KI G E + PIVLSP SDKS
Sbjct: 63 ENGTNTSDNV-VSYASQIESFKSLAGDSDAVLLEEFINKINAGGEDGVSPIVLSPDSDKS 121
Query: 602 HR 607
HR
Sbjct: 122 HR 123
>ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata subsp. lyrata]
gi|297330312|gb|EFH60731.1| pseudouridylate synthase
[Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 675 bits (1742), Expect(2) = 0.0
Identities = 351/561 (62%), Positives = 420/561 (74%), Gaps = 2/561 (0%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRDG-SKKRKNRDDKPYDSRGSESWPESLGKF 762
KF + GPD+TSKCIRVR+N G + R SKKRK R DKP+DSRGSE WPE +GKF
Sbjct: 170 KFLVTDTVDGPDSTSKCIRVRVNSGAHNNRGNRSKKRKERGDKPFDSRGSEHWPEHVGKF 229
Query: 763 LRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN 942
LRFHL+KENKDTQEALG+IGKMLG+QP+SFGF+GTKDKRSVSTQRVTVFKQ+AS+LAALN
Sbjct: 230 LRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALN 289
Query: 943 ERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFG 1122
+RL GIK+GDFCHV EGL+LGQL GNRFTITLRGVVA+SE+ IK+S +L K GFINYFG
Sbjct: 290 KRLFGIKVGDFCHVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSAESLGKDGFINYFG 349
Query: 1123 LQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQ 1302
LQRFGS SVPTH +GA LL+GEWK A + REYYKETGDI+GTLRQ
Sbjct: 350 LQRFGSGSVPTHHVGAALLKGEWKDA------ECSNAWHVVNDAREYYKETGDIDGTLRQ 403
Query: 1303 LPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVD 1482
LPR+LVAE+AI+QCL+K PGN+LQALK IPRTLRMMYVHSYQSYLWN+AAS+R+ KYG
Sbjct: 404 LPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVTKYGTS 463
Query: 1483 QVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVT 1662
QVVLGDLV K + + + SE + SS + + D +D+ + D+P E VK V+
Sbjct: 464 QVVLGDLVSTKVDAEKRMVDSLTSEHNE-SSEEALDCDQVDDTAVVDLPAERSDLVKVVS 522
Query: 1663 EEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSM 1842
EDL AGTY D+VLPLPGSRVIYP NDI E+YHDLAKKD I+L ES H +KEFSITSM
Sbjct: 523 IEDLEAGTYLTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSM 582
Query: 1843 TGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGNGKGRHEDAIDN 2022
TGGYRRVFQK DFEWE+LTY D N PLAETD D I + ++ +G+ + ++ + +
Sbjct: 583 TGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRITVYKPVDK--VGSAEEIEDEPLKS 640
Query: 2023 E-EQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLPASCYA 2199
+ S +LKD + E + D D+++TQ ALK++ TLP+SCYA
Sbjct: 641 DTNPHESCETNLKDQTDSKE-----------DEKDTRNPDSEQTQMALKMALTLPSSCYA 689
Query: 2200 TMAIRELLKTSTSVAFHKTLN 2262
TMAIRELLKTSTSVA+HKTLN
Sbjct: 690 TMAIRELLKTSTSVAYHKTLN 710
Score = 132 bits (331), Expect(2) = 0.0
Identities = 67/123 (54%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQR-YSDFIVNEVDLEGKVVRLTSLVAPPEL--VD 421
M ++DE+DVGI C+IS+LPGFRGILKQR Y+DFIVNEVD++G VV LTSL PPE+ +
Sbjct: 37 MTTVDEADVGISCFISQLPGFRGILKQRSYADFIVNEVDIDGNVVHLTSLDLPPEMDVKE 96
Query: 422 EKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKS 601
E + K SD ++Y + I+SFR+++ +DA+ L+T I+++ G + I P+VL PSSDKS
Sbjct: 97 EDKTKTSDNVPQNYTSAIESFRSISSVTDAERLETLINQVTSGTDDEISPVVLDPSSDKS 156
Query: 602 HRT 610
RT
Sbjct: 157 KRT 159
>ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Capsella rubella]
gi|482568803|gb|EOA32992.1| hypothetical protein
CARUB_v10016322mg [Capsella rubella]
Length = 704
Score = 668 bits (1724), Expect(2) = 0.0
Identities = 352/560 (62%), Positives = 415/560 (74%), Gaps = 1/560 (0%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRDG-SKKRKNRDDKPYDSRGSESWPESLGKF 762
KF + GPD+TSKCIRVR+N G + R SKKRK R DKP+DSRGSE WPE +GKF
Sbjct: 171 KFLVTDTVDGPDSTSKCIRVRVNSGAHNNRGNRSKKRKERGDKPFDSRGSEHWPEHVGKF 230
Query: 763 LRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN 942
LRFHL+KENKDTQEALG+IGKMLG+QP+SFGF+GTKDKRSVSTQ VTVFKQ+AS+LAALN
Sbjct: 231 LRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQCVTVFKQQASKLAALN 290
Query: 943 ERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFG 1122
+RL GIK+GDFCHV EGL+LGQL GNRFTITLRGVVA+SE+ IK+S +L K GFINYFG
Sbjct: 291 KRLFGIKVGDFCHVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSAESLGKDGFINYFG 350
Query: 1123 LQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQ 1302
LQRFGS SVPTH +GA LL+GEWK A R + REYYKETGDI+GTLRQ
Sbjct: 351 LQRFGSGSVPTHHVGAALLKGEWKDA------ERINAWHVVNDAREYYKETGDIDGTLRQ 404
Query: 1303 LPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVD 1482
LPR+LVAE+AI+QCL+K PGN+LQALK IPRTLRMMYVHSYQSYLWN+AAS+R++KYG
Sbjct: 405 LPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKKYGTS 464
Query: 1483 QVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVT 1662
QVVLGDLV K K T SE ++ ++ D + D +D+ + D+P E VK V+
Sbjct: 465 QVVLGDLVSTKIDATKKMADT--SEHKE-NNEDALDCDQVDDTAIVDLPAERSDLVKVVS 521
Query: 1663 EEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSM 1842
EDL AGTY+ D+VLPLPGSRVIYP NDI E+YHDLAKKD I+L +S H +KEFSITSM
Sbjct: 522 VEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTDSIHGVKEFSITSM 581
Query: 1843 TGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGNGKGRHEDAIDN 2022
TGGYRRVFQK DFEWE+LTY D N PLAETD D I + + G E+ D
Sbjct: 582 TGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRITMT--------VDKVGSAEEVEDE 633
Query: 2023 EEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLPASCYAT 2202
+S P D + E D D ++++TQ ALK++ TLP+SCYAT
Sbjct: 634 SMNPISNPPE-TDLNDQTERKDDE--------KDTGNPNSEQTQMALKMALTLPSSCYAT 684
Query: 2203 MAIRELLKTSTSVAFHKTLN 2262
MAIRELLKTSTSVA+HKTLN
Sbjct: 685 MAIRELLKTSTSVAYHKTLN 704
Score = 136 bits (343), Expect(2) = 0.0
Identities = 67/122 (54%), Positives = 93/122 (76%), Gaps = 2/122 (1%)
Frame = +2
Query: 251 MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPEL--VDE 424
MK++DE+DVGI C+IS+LPGFRGILKQRY+DFIVNEVD+ G VV LTSL PPE+ +E
Sbjct: 39 MKTVDEADVGISCFISQLPGFRGILKQRYADFIVNEVDINGNVVHLTSLDLPPEMDVKEE 98
Query: 425 KEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSH 604
+ K SD ++Y + I+SF++++ +DA+ L+T I+++ G + I P+VL PSSDKS
Sbjct: 99 DKTKSSDNVPQNYTSAIESFKSISNATDAERLETLINQVTSGTDDEISPVVLDPSSDKSK 158
Query: 605 RT 610
RT
Sbjct: 159 RT 160
>ref|XP_006408145.1| hypothetical protein EUTSA_v10022286mg, partial [Eutrema salsugineum]
gi|557109291|gb|ESQ49598.1| hypothetical protein
EUTSA_v10022286mg, partial [Eutrema salsugineum]
Length = 692
Score = 671 bits (1730), Expect(2) = 0.0
Identities = 346/552 (62%), Positives = 420/552 (76%), Gaps = 1/552 (0%)
Frame = +1
Query: 586 KF**VSSYHGPDTTSKCIRVRLNMGNTHGRDG-SKKRKNRDDKPYDSRGSESWPESLGKF 762
KF + GPD TSKCIRVR+N + + R SKKRK R DKP+DSRGSE WPE LGKF
Sbjct: 171 KFLVTDTVDGPDPTSKCIRVRVNSADHNSRGKRSKKRKERGDKPFDSRGSEHWPEHLGKF 230
Query: 763 LRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN 942
++FHL+KENKDTQEALG+IGKMLG+QP+SFGF+GTKDKRSVS+QRVTVFKQ+AS+LAALN
Sbjct: 231 VKFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSSQRVTVFKQQASKLAALN 290
Query: 943 ERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGFINYFG 1122
+RL GIK+GDFCHV EGL+LGQL GNRFTITLRGVVA+SE+ IK+S +L K GFINYFG
Sbjct: 291 KRLFGIKVGDFCHVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSAESLGKDGFINYFG 350
Query: 1123 LQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIEGTLRQ 1302
LQRFGS SVPTH +GA +L+GEWK AVD+ILDPRE I REYYKETGDI+GTLRQ
Sbjct: 351 LQRFGSGSVPTHHVGAAVLKGEWKEAVDMILDPRE-----INEAREYYKETGDIDGTLRQ 405
Query: 1303 LPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVD 1482
LPR+LVAE+AI+QCL+K PGN+LQALK IPRTLRMMYVHSYQSYLWN+AAS+R++KYG +
Sbjct: 406 LPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVQKYGTN 465
Query: 1483 QVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVT 1662
QVVLGDLV K A + +G+ SE ++ ++ + + D LD+ + D+ E VK V
Sbjct: 466 QVVLGDLVSTKVDDAKRIVGSLTSEHKE-NNEEALDCDQLDDTAVVDLSGERSDLVKVVD 524
Query: 1663 EEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSM 1842
ED+ AGTY+ D+VLPLPGSRVIYP NDI E+YH+LAKKD I+L ES H +KEFSITSM
Sbjct: 525 IEDMEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHNLAKKDGISLTESIHGVKEFSITSM 584
Query: 1843 TGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGNGKGRHEDAIDN 2022
TGGYRRVFQK DFEWE+LTY D N PLAETD D I ++ D + +
Sbjct: 585 TGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRITLEKT-------------RDKVGS 631
Query: 2023 EEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALKLSFTLPASCYAT 2202
E+ S+K S+ E ++++ D +++TQ ALK++ TLP+SCYAT
Sbjct: 632 AEEI----ESMKSDSRPPES-------CESDLKDTGNPVSEQTQLALKMALTLPSSCYAT 680
Query: 2203 MAIRELLKTSTS 2238
MAIRELLKTSTS
Sbjct: 681 MAIRELLKTSTS 692
Score = 132 bits (332), Expect(2) = 0.0
Identities = 69/122 (56%), Positives = 92/122 (75%), Gaps = 3/122 (2%)
Frame = +2
Query: 254 KSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE- 430
K++DESDVGI C+IS+LPGFRGILKQRY+DFIVNEVD++G VV LTSL PE+ DEKE
Sbjct: 40 KTVDESDVGISCFISQLPGFRGILKQRYADFIVNEVDMDGNVVHLTSLDVSPEM-DEKEE 98
Query: 431 --VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSH 604
K SD+ +SY + I+SFR+++ +DA+ L+T I+++ + I P+V PSSDKS
Sbjct: 99 EKTKSSDDVPQSYASAIESFRSISSVTDAERLETLINQVTSVTDDEISPVVFDPSSDKSK 158
Query: 605 RT 610
RT
Sbjct: 159 RT 160