BLASTX nr result

ID: Catharanthus23_contig00017696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00017696
         (400 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348578.1| PREDICTED: putative late blight resistance p...    57   3e-06
ref|XP_004239116.1| PREDICTED: putative late blight resistance p...    55   7e-06
gb|AAC49408.1| PRF [Solanum lycopersicum]                              55   7e-06
gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]                    55   7e-06
gb|AAF76308.1| Prf [Solanum pimpinellifolium]                          55   7e-06

>ref|XP_006348578.1| PREDICTED: putative late blight resistance protein homolog
            R1A-10-like [Solanum tuberosum]
          Length = 915

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
 Frame = -3

Query: 389  EGEFAELKYLKLDNLNIVKWNAYSDQLPKXXXXXXXXXXXLEEVPLGVAYIPTLEKVDVQ 210
            E +F  LK+L    LN+  W A SD  P            L E+P+    I TLE +++ 
Sbjct: 745  ETKFESLKFLLFHGLNLKYWEASSDNFPNLRRLVLKKCTKLNEIPIDFGEICTLESIELY 804

Query: 209  WCGDHVEESVRRIKEE----GDENLKVFINFAELH 117
             CG   EES R+I++E    G+  LK+FI+  E +
Sbjct: 805  QCGVGAEESARKIEQEQEDMGNNFLKIFIHGIEAY 839


>ref|XP_004239116.1| PREDICTED: putative late blight resistance protein homolog
            R1B-17-like [Solanum lycopersicum]
          Length = 1825

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/77 (36%), Positives = 41/77 (53%)
 Frame = -3

Query: 398  DMVEGEFAELKYLKLDNLNIVKWNAYSDQLPKXXXXXXXXXXXLEEVPLGVAYIPTLEKV 219
            ++ + EF ELKYLKLDNL +V+W+   D  PK           LE++P        L +V
Sbjct: 1720 EVKDSEFLELKYLKLDNLKVVQWSISDDAFPKLEHLVLTKCKHLEKIPSRFEDAVCLNRV 1779

Query: 218  DVQWCGDHVEESVRRIK 168
            +V WC  +V  S + I+
Sbjct: 1780 EVNWCNWNVANSAQDIQ 1796


>gb|AAC49408.1| PRF [Solanum lycopersicum]
          Length = 1824

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/77 (36%), Positives = 41/77 (53%)
 Frame = -3

Query: 398  DMVEGEFAELKYLKLDNLNIVKWNAYSDQLPKXXXXXXXXXXXLEEVPLGVAYIPTLEKV 219
            ++ + EF ELKYLKLDNL +V+W+   D  PK           LE++P        L +V
Sbjct: 1719 EVKDSEFLELKYLKLDNLKVVQWSISDDAFPKLEHLVLTKCKHLEKIPSRFEDAVCLNRV 1778

Query: 218  DVQWCGDHVEESVRRIK 168
            +V WC  +V  S + I+
Sbjct: 1779 EVNWCNWNVANSAQDIQ 1795


>gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]
          Length = 1825

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/77 (36%), Positives = 41/77 (53%)
 Frame = -3

Query: 398  DMVEGEFAELKYLKLDNLNIVKWNAYSDQLPKXXXXXXXXXXXLEEVPLGVAYIPTLEKV 219
            ++ + EF ELKYLKLDNL +V+W+   D  PK           LE++P        L +V
Sbjct: 1720 EVKDSEFLELKYLKLDNLKVVQWSISDDAFPKLEHLVLTKCKHLEKIPSRFEDAVCLNRV 1779

Query: 218  DVQWCGDHVEESVRRIK 168
            +V WC  +V  S + I+
Sbjct: 1780 EVNWCNWNVANSAQDIQ 1796


>gb|AAF76308.1| Prf [Solanum pimpinellifolium]
          Length = 1824

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/77 (36%), Positives = 41/77 (53%)
 Frame = -3

Query: 398  DMVEGEFAELKYLKLDNLNIVKWNAYSDQLPKXXXXXXXXXXXLEEVPLGVAYIPTLEKV 219
            ++ + EF ELKYLKLDNL +V+W+   D  PK           LE++P        L +V
Sbjct: 1719 EVKDSEFLELKYLKLDNLKVVQWSISDDAFPKLEHLVLTKCKHLEKIPSRFEDAVCLNRV 1778

Query: 218  DVQWCGDHVEESVRRIK 168
            +V WC  +V  S + I+
Sbjct: 1779 EVNWCNWNVANSAQDIQ 1795


Top