BLASTX nr result
ID: Catharanthus23_contig00017456
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00017456 (1403 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004169632.1| PREDICTED: signal recognition particle 43 kD... 60 2e-06 ref|XP_004144929.1| PREDICTED: signal recognition particle 43 kD... 60 2e-06 gb|EMJ02459.1| hypothetical protein PRUPE_ppa008415mg [Prunus pe... 55 9e-06 >ref|XP_004169632.1| PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Cucumis sativus] Length = 358 Score = 59.7 bits (143), Expect(2) = 2e-06 Identities = 29/44 (65%), Positives = 35/44 (79%) Frame = +1 Query: 1117 YATTWFPSDFIAKDVIAEYETSC*TAA*KADESAMKWLLDYNDE 1248 ++ +W PSDFIAKDV+AEYET TAA KADESA+K L+D DE Sbjct: 91 HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDE 134 Score = 20.4 bits (41), Expect(2) = 2e-06 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +2 Query: 1013 DESYGQVNKII 1045 DESYG+V+ II Sbjct: 60 DESYGEVDGII 70 >ref|XP_004144929.1| PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Cucumis sativus] gi|449472373|ref|XP_004153574.1| PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Cucumis sativus] Length = 355 Score = 59.7 bits (143), Expect(2) = 2e-06 Identities = 29/44 (65%), Positives = 35/44 (79%) Frame = +1 Query: 1117 YATTWFPSDFIAKDVIAEYETSC*TAA*KADESAMKWLLDYNDE 1248 ++ +W PSDFIAKDV+AEYET TAA KADESA+K L+D DE Sbjct: 91 HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDE 134 Score = 20.4 bits (41), Expect(2) = 2e-06 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +2 Query: 1013 DESYGQVNKII 1045 DESYG+V+ II Sbjct: 60 DESYGEVDGII 70 >gb|EMJ02459.1| hypothetical protein PRUPE_ppa008415mg [Prunus persica] Length = 333 Score = 54.7 bits (130), Expect(2) = 9e-06 Identities = 28/50 (56%), Positives = 36/50 (72%) Frame = +1 Query: 1099 LSRKTLYATTWFPSDFIAKDVIAEYETSC*TAA*KADESAMKWLLDYNDE 1248 +S K +A +W PSDFIAKDV+AEYE+ TAA KADESA+ L+ D+ Sbjct: 50 ISWKDGHAPSWVPSDFIAKDVVAEYESPWWTAAKKADESALSQLIAAEDD 99 Score = 23.1 bits (48), Expect(2) = 9e-06 Identities = 9/11 (81%), Positives = 11/11 (100%) Frame = +2 Query: 1013 DESYGQVNKII 1045 DESYG+V+KII Sbjct: 25 DESYGEVDKII 35