BLASTX nr result

ID: Catharanthus23_contig00017456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00017456
         (1403 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169632.1| PREDICTED: signal recognition particle 43 kD...    60   2e-06
ref|XP_004144929.1| PREDICTED: signal recognition particle 43 kD...    60   2e-06
gb|EMJ02459.1| hypothetical protein PRUPE_ppa008415mg [Prunus pe...    55   9e-06

>ref|XP_004169632.1| PREDICTED: signal recognition particle 43 kDa protein,
            chloroplastic-like [Cucumis sativus]
          Length = 358

 Score = 59.7 bits (143), Expect(2) = 2e-06
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 1117 YATTWFPSDFIAKDVIAEYETSC*TAA*KADESAMKWLLDYNDE 1248
            ++ +W PSDFIAKDV+AEYET   TAA KADESA+K L+D  DE
Sbjct: 91   HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDE 134



 Score = 20.4 bits (41), Expect(2) = 2e-06
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 1013 DESYGQVNKII 1045
            DESYG+V+ II
Sbjct: 60   DESYGEVDGII 70


>ref|XP_004144929.1| PREDICTED: signal recognition particle 43 kDa protein,
            chloroplastic-like [Cucumis sativus]
            gi|449472373|ref|XP_004153574.1| PREDICTED: signal
            recognition particle 43 kDa protein, chloroplastic-like
            [Cucumis sativus]
          Length = 355

 Score = 59.7 bits (143), Expect(2) = 2e-06
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 1117 YATTWFPSDFIAKDVIAEYETSC*TAA*KADESAMKWLLDYNDE 1248
            ++ +W PSDFIAKDV+AEYET   TAA KADESA+K L+D  DE
Sbjct: 91   HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDE 134



 Score = 20.4 bits (41), Expect(2) = 2e-06
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 1013 DESYGQVNKII 1045
            DESYG+V+ II
Sbjct: 60   DESYGEVDGII 70


>gb|EMJ02459.1| hypothetical protein PRUPE_ppa008415mg [Prunus persica]
          Length = 333

 Score = 54.7 bits (130), Expect(2) = 9e-06
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = +1

Query: 1099 LSRKTLYATTWFPSDFIAKDVIAEYETSC*TAA*KADESAMKWLLDYNDE 1248
            +S K  +A +W PSDFIAKDV+AEYE+   TAA KADESA+  L+   D+
Sbjct: 50   ISWKDGHAPSWVPSDFIAKDVVAEYESPWWTAAKKADESALSQLIAAEDD 99



 Score = 23.1 bits (48), Expect(2) = 9e-06
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +2

Query: 1013 DESYGQVNKII 1045
            DESYG+V+KII
Sbjct: 25   DESYGEVDKII 35


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