BLASTX nr result
ID: Catharanthus23_contig00017405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00017405
(516 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY05749.1| ATP-dependent RNA helicase, mitochondrial (SUV3) ... 108 9e-22
gb|EOY05748.1| ATP-dependent RNA and DNA helicase, putative isof... 108 9e-22
gb|EOY05745.1| ATP-dependent RNA and DNA helicase, putative isof... 108 9e-22
ref|XP_004247583.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 106 3e-21
ref|XP_006360763.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 105 5e-21
emb|CBI26285.3| unnamed protein product [Vitis vinifera] 103 2e-20
ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 103 3e-20
gb|EOY05747.1| ATP-dependent RNA helicase, mitochondrial (SUV3) ... 97 2e-18
gb|EOY05746.1| ATP-dependent RNA and DNA helicase, putative isof... 97 2e-18
gb|ESW29100.1| hypothetical protein PHAVU_002G043200g [Phaseolus... 96 4e-18
gb|EPS66047.1| hypothetical protein M569_08726, partial [Genlise... 96 6e-18
gb|EMJ23250.1| hypothetical protein PRUPE_ppa003115mg [Prunus pe... 95 8e-18
ref|XP_004296632.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 94 2e-17
ref|XP_006378385.1| hypothetical protein POPTR_0010s09420g [Popu... 92 7e-17
ref|XP_002315757.1| hypothetical protein POPTR_0010s09420g [Popu... 92 7e-17
ref|XP_006573870.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 92 9e-17
ref|XP_006573869.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 92 9e-17
ref|XP_004134129.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 91 1e-16
ref|XP_006419993.1| hypothetical protein CICLE_v10004646mg [Citr... 89 6e-16
ref|XP_006419992.1| hypothetical protein CICLE_v10004646mg [Citr... 89 6e-16
>gb|EOY05749.1| ATP-dependent RNA helicase, mitochondrial (SUV3) isoform 5
[Theobroma cacao]
Length = 412
Score = 108 bits (269), Expect = 9e-22
Identities = 56/99 (56%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +3
Query: 222 MAFFLFR-RRLSATVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFT 398
MA L R RR+SA +L +N + LE KF R++SS S KFDFT
Sbjct: 1 MASLLLRQRRVSALGVSRILQDNGDSFRLRLESKFETFASIGVMIRKYSSGKSAAKFDFT 60
Query: 399 DLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
DLTCPHTWYPNARK+ R +FLHVGPTNSGKT+ ALKRLE
Sbjct: 61 DLTCPHTWYPNARKKNRKVFLHVGPTNSGKTYHALKRLE 99
>gb|EOY05748.1| ATP-dependent RNA and DNA helicase, putative isoform 4 [Theobroma
cacao]
Length = 571
Score = 108 bits (269), Expect = 9e-22
Identities = 56/99 (56%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +3
Query: 222 MAFFLFR-RRLSATVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFT 398
MA L R RR+SA +L +N + LE KF R++SS S KFDFT
Sbjct: 1 MASLLLRQRRVSALGVSRILQDNGDSFRLRLESKFETFASIGVMIRKYSSGKSAAKFDFT 60
Query: 399 DLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
DLTCPHTWYPNARK+ R +FLHVGPTNSGKT+ ALKRLE
Sbjct: 61 DLTCPHTWYPNARKKNRKVFLHVGPTNSGKTYHALKRLE 99
>gb|EOY05745.1| ATP-dependent RNA and DNA helicase, putative isoform 1 [Theobroma
cacao]
Length = 570
Score = 108 bits (269), Expect = 9e-22
Identities = 56/99 (56%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +3
Query: 222 MAFFLFR-RRLSATVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFT 398
MA L R RR+SA +L +N + LE KF R++SS S KFDFT
Sbjct: 1 MASLLLRQRRVSALGVSRILQDNGDSFRLRLESKFETFASIGVMIRKYSSGKSAAKFDFT 60
Query: 399 DLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
DLTCPHTWYPNARK+ R +FLHVGPTNSGKT+ ALKRLE
Sbjct: 61 DLTCPHTWYPNARKKNRKVFLHVGPTNSGKTYHALKRLE 99
>ref|XP_004247583.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Solanum lycopersicum]
Length = 569
Score = 106 bits (265), Expect = 3e-21
Identities = 56/100 (56%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
Frame = +3
Query: 222 MAFFLFRRRLSATVACH--VLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDF 395
MA LFRRRLS + +L L+P + S G NC R+FSSS++ K DF
Sbjct: 1 MASLLFRRRLSPASISYKTLLNGGGEFYLLPGNMATEASFGICNCLRKFSSSTAARKVDF 60
Query: 396 TDLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
TDLT PHTWYP+ARK+ RN+FLHVGPTNSGKT+ ALK+LE
Sbjct: 61 TDLTRPHTWYPHARKKSRNVFLHVGPTNSGKTYYALKQLE 100
>ref|XP_006360763.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Solanum tuberosum]
Length = 569
Score = 105 bits (263), Expect = 5e-21
Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
Frame = +3
Query: 222 MAFFLFRRRLSATVACH--VLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDF 395
M+ LFRRRLS + +L L+P + S G NC R+FSSS++ K DF
Sbjct: 1 MSSLLFRRRLSPASVSYKSLLHGGGEFYLLPGNMATEASFGICNCLRKFSSSTAARKVDF 60
Query: 396 TDLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
TDLT PHTWYP+ARK+ RN+FLHVGPTNSGKT+ ALK+LE
Sbjct: 61 TDLTRPHTWYPHARKKSRNVFLHVGPTNSGKTYYALKQLE 100
>emb|CBI26285.3| unnamed protein product [Vitis vinifera]
Length = 612
Score = 103 bits (258), Expect = 2e-20
Identities = 55/95 (57%), Positives = 61/95 (64%)
Frame = +3
Query: 231 FLFRRRLSATVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTC 410
FL RR LS + LEL+F I G N RQFSSSSST K DF DLT
Sbjct: 5 FLLRRHLSFSGISPTFHGTMEPFHRHLELRFRILVGVCNRIRQFSSSSSTSKLDFMDLTH 64
Query: 411 PHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
PHTWYPNAR++ R + +HVGPTNSGKTH ALKRLE
Sbjct: 65 PHTWYPNARRKSRKVIMHVGPTNSGKTHHALKRLE 99
>ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Vitis vinifera]
Length = 572
Score = 103 bits (256), Expect = 3e-20
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = +3
Query: 309 LELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHTWYPNARKEKRNIFLHVGPTNSGK 488
LEL+F I G N RQFSSSSST K DF DLT PHTWYPNAR++ R + +HVGPTNSGK
Sbjct: 35 LELRFRILVGVCNRIRQFSSSSSTSKLDFMDLTHPHTWYPNARRKSRKVIMHVGPTNSGK 94
Query: 489 THQALKRLE 515
TH ALKRLE
Sbjct: 95 THHALKRLE 103
>gb|EOY05747.1| ATP-dependent RNA helicase, mitochondrial (SUV3) isoform 3
[Theobroma cacao]
Length = 403
Score = 97.4 bits (241), Expect = 2e-18
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = +3
Query: 354 RQFSSSSSTIKFDFTDLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
R++SS S KFDFTDLTCPHTWYPNARK+ R +FLHVGPTNSGKT+ ALKRLE
Sbjct: 3 RKYSSGKSAAKFDFTDLTCPHTWYPNARKKNRKVFLHVGPTNSGKTYHALKRLE 56
>gb|EOY05746.1| ATP-dependent RNA and DNA helicase, putative isoform 2 [Theobroma
cacao]
Length = 527
Score = 97.4 bits (241), Expect = 2e-18
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = +3
Query: 354 RQFSSSSSTIKFDFTDLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
R++SS S KFDFTDLTCPHTWYPNARK+ R +FLHVGPTNSGKT+ ALKRLE
Sbjct: 3 RKYSSGKSAAKFDFTDLTCPHTWYPNARKKNRKVFLHVGPTNSGKTYHALKRLE 56
>gb|ESW29100.1| hypothetical protein PHAVU_002G043200g [Phaseolus vulgaris]
Length = 566
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/98 (51%), Positives = 61/98 (62%)
Frame = +3
Query: 222 MAFFLFRRRLSATVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTD 401
MA FL RR +A + L N + + KF G N +SSSS I+ DFTD
Sbjct: 1 MASFLLRR--NANLFARSLLGNKEPSRLYFQFKFQSLGGAANMVHSYSSSSGRIRNDFTD 58
Query: 402 LTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
LTCPH+WYP ARK+ R + +HVGPTNSGKTH ALK+LE
Sbjct: 59 LTCPHSWYPKARKKHRRVIMHVGPTNSGKTHHALKQLE 96
>gb|EPS66047.1| hypothetical protein M569_08726, partial [Genlisea aurea]
Length = 542
Score = 95.5 bits (236), Expect = 6e-18
Identities = 49/81 (60%), Positives = 56/81 (69%)
Frame = +3
Query: 273 VLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHTWYPNARKEKRN 452
+L +N + L L LK S G C RQ SS S+ K DFTDLT PHTWYP AR KR+
Sbjct: 6 LLIDNEVLYLPNLGLKLVSSFGASQCLRQLSSCSAANKVDFTDLTSPHTWYPIARSRKRS 65
Query: 453 IFLHVGPTNSGKTHQALKRLE 515
+ LHVGPTNSGKT+QALKRLE
Sbjct: 66 VTLHVGPTNSGKTYQALKRLE 86
>gb|EMJ23250.1| hypothetical protein PRUPE_ppa003115mg [Prunus persica]
Length = 601
Score = 95.1 bits (235), Expect = 8e-18
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +3
Query: 309 LELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHTWYPNARKEKRNIFLHVGPTNSGK 488
LELK F+ +Q+SSSS KFDFTDLT PHTWYP AR ++R + LH+GPTNSGK
Sbjct: 8 LELKVATLVDVFDKTKQYSSSSGATKFDFTDLTSPHTWYPKARSKQRKVILHMGPTNSGK 67
Query: 489 THQALKRLE 515
TH ALKRLE
Sbjct: 68 THNALKRLE 76
>ref|XP_004296632.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 573
Score = 94.0 bits (232), Expect = 2e-17
Identities = 51/100 (51%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Frame = +3
Query: 225 AFFLFRRRLSATVACHVL---PENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDF 395
A L RRR+S+ L P N + LELK G + R +SSSS T DF
Sbjct: 3 ASLLLRRRVSSAGVSRTLQGLPGNVEPFCLHLELKVGALVSVSDKTRFYSSSSGTTSVDF 62
Query: 396 TDLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
DLT PHTWYP AR + R + LH+GPTNSGKTH ALKRLE
Sbjct: 63 LDLTSPHTWYPKARSKPRKVILHMGPTNSGKTHNALKRLE 102
>ref|XP_006378385.1| hypothetical protein POPTR_0010s09420g [Populus trichocarpa]
gi|550329444|gb|ERP56182.1| hypothetical protein
POPTR_0010s09420g [Populus trichocarpa]
Length = 448
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 222 MAFFLFRRRLSATVACH-VLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTI--KFD 392
MA FL R R +T+ +L + +E + G G N R++S+S+ KFD
Sbjct: 1 MAAFLLRHRQVSTLGVSGILKDKLDPSRPHVESRLGALAGVCNLLREYSTSNDNRAHKFD 60
Query: 393 FTDLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
F DLTCPH WYP AR++ R IFLHVGPTNSGKT+ ALK+LE
Sbjct: 61 FLDLTCPHAWYPVARRKNRKIFLHVGPTNSGKTYHALKQLE 101
>ref|XP_002315757.1| hypothetical protein POPTR_0010s09420g [Populus trichocarpa]
gi|222864797|gb|EEF01928.1| hypothetical protein
POPTR_0010s09420g [Populus trichocarpa]
Length = 571
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 222 MAFFLFRRRLSATVACH-VLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTI--KFD 392
MA FL R R +T+ +L + +E + G G N R++S+S+ KFD
Sbjct: 1 MAAFLLRHRQVSTLGVSGILKDKLDPSRPHVESRLGALAGVCNLLREYSTSNDNRAHKFD 60
Query: 393 FTDLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
F DLTCPH WYP AR++ R IFLHVGPTNSGKT+ ALK+LE
Sbjct: 61 FLDLTCPHAWYPVARRKNRKIFLHVGPTNSGKTYHALKQLE 101
>ref|XP_006573870.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
isoform X2 [Glycine max]
Length = 443
Score = 91.7 bits (226), Expect = 9e-17
Identities = 50/98 (51%), Positives = 60/98 (61%)
Frame = +3
Query: 222 MAFFLFRRRLSATVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTD 401
MA FL RR + + L N +LKF G N +SSS+ I+ DFTD
Sbjct: 1 MASFLLRR--NRNLFARSLLGNKEPFRPYFQLKFLSLGGAANKVHPYSSSNGPIRNDFTD 58
Query: 402 LTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
LTCPHTWYP AR++ R + LHVGPTNSGKTH ALK+LE
Sbjct: 59 LTCPHTWYPQARRKHRRVILHVGPTNSGKTHHALKQLE 96
>ref|XP_006573869.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
isoform X1 [Glycine max]
Length = 565
Score = 91.7 bits (226), Expect = 9e-17
Identities = 50/98 (51%), Positives = 60/98 (61%)
Frame = +3
Query: 222 MAFFLFRRRLSATVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTD 401
MA FL RR + + L N +LKF G N +SSS+ I+ DFTD
Sbjct: 1 MASFLLRR--NRNLFARSLLGNKEPFRPYFQLKFLSLGGAANKVHPYSSSNGPIRNDFTD 58
Query: 402 LTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
LTCPHTWYP AR++ R + LHVGPTNSGKTH ALK+LE
Sbjct: 59 LTCPHTWYPQARRKHRRVILHVGPTNSGKTHHALKQLE 96
>ref|XP_004134129.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Cucumis sativus] gi|449504169|ref|XP_004162271.1|
PREDICTED: ATP-dependent RNA helicase SUPV3L1,
mitochondrial-like [Cucumis sativus]
Length = 560
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/57 (73%), Positives = 47/57 (82%)
Frame = +3
Query: 345 NCFRQFSSSSSTIKFDFTDLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
+C R +S S S FDFTDLTCPH+WYPNARK+ R IFLH+GPTNSGKTH ALKRLE
Sbjct: 34 SCCRLYSISRSN--FDFTDLTCPHSWYPNARKKHRKIFLHMGPTNSGKTHNALKRLE 88
>ref|XP_006419993.1| hypothetical protein CICLE_v10004646mg [Citrus clementina]
gi|557521866|gb|ESR33233.1| hypothetical protein
CICLE_v10004646mg [Citrus clementina]
Length = 508
Score = 89.0 bits (219), Expect = 6e-16
Identities = 50/99 (50%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +3
Query: 222 MAFFLFR-RRLSATVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFT 398
MA L R R+ SA +L +N + E G R + S S KFDFT
Sbjct: 1 MALLLLRNRKASALGIPRILRDNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFT 60
Query: 399 DLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
DLT PHTWYP ARK+ R + LHVGPTNSGKTHQAL RLE
Sbjct: 61 DLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLE 99
>ref|XP_006419992.1| hypothetical protein CICLE_v10004646mg [Citrus clementina]
gi|557521865|gb|ESR33232.1| hypothetical protein
CICLE_v10004646mg [Citrus clementina]
Length = 564
Score = 89.0 bits (219), Expect = 6e-16
Identities = 50/99 (50%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +3
Query: 222 MAFFLFR-RRLSATVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFT 398
MA L R R+ SA +L +N + E G R + S S KFDFT
Sbjct: 1 MALLLLRNRKASALGIPRILRDNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFT 60
Query: 399 DLTCPHTWYPNARKEKRNIFLHVGPTNSGKTHQALKRLE 515
DLT PHTWYP ARK+ R + LHVGPTNSGKTHQAL RLE
Sbjct: 61 DLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLE 99