BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00017352
         (2843 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353639.1| PREDICTED: pentatricopeptide repeat-containi...   674   0.0  
ref|XP_004241813.1| PREDICTED: pentatricopeptide repeat-containi...   667   0.0  
gb|EMJ23233.1| hypothetical protein PRUPE_ppa003040mg [Prunus pe...   657   0.0  
ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi...   642   0.0  
gb|EXC20787.1| hypothetical protein L484_007369 [Morus notabilis]     629   0.0  
ref|XP_004292965.1| PREDICTED: pentatricopeptide repeat-containi...   628   0.0  
ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containi...   600   0.0  
ref|XP_002516618.1| pentatricopeptide repeat-containing protein,...   605   e-180
ref|XP_002308636.1| hypothetical protein POPTR_0006s26360g [Popu...   604   e-179
ref|XP_004498635.1| PREDICTED: pentatricopeptide repeat-containi...   607   e-178
gb|ESW33251.1| hypothetical protein PHAVU_001G055200g [Phaseolus...   598   e-175
gb|EOY31372.1| Pentatricopeptide repeat superfamily protein isof...   591   e-175
gb|EOY31373.1| Pentatricopeptide repeat superfamily protein isof...   591   e-175
gb|EOY31375.1| Pentatricopeptide repeat (PPR) superfamily protei...   590   e-175
ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containi...   583   e-172
ref|XP_006476197.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   582   e-167
ref|XP_006450554.1| hypothetical protein CICLE_v10008018mg [Citr...   588   e-165
ref|XP_003588687.1| Pentatricopeptide repeat-containing protein ...   585   e-164
ref|XP_002871469.1| pentatricopeptide repeat-containing protein ...   542   e-158
ref|NP_196692.1| pentatricopeptide repeat-containing protein [Ar...   534   e-157

>ref|XP_006353639.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
            mitochondrial-like [Solanum tuberosum]
          Length = 604

 Score =  674 bits (1738), Expect(2) = 0.0
 Identities = 345/535 (64%), Positives = 416/535 (77%), Gaps = 5/535 (0%)
 Frame = -3

Query: 2784 RRDFLSLMTILRRATT---TVRRYSTQS-SAAIRGKPKWPLSK-SKPDXXXXXXXXXXXX 2620
            R   +SL ++L   TT   T + +STQS   + RGKP   L K + P             
Sbjct: 10   RHSIISLTSLLSHLTTKNPTSKLFSTQSWLKSTRGKPLMKLPKLNHPPKQPIPLFSPPPS 69

Query: 2619 XXXXXXPNFNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPK 2440
                  PN+  ++FT L ++L +  +  GP LENAL+   ++  E + L++FNH DSSPK
Sbjct: 70   TQQPETPNYCPTDFTTLCEILRDPIIPAGPVLENALDRAGVEVNECMFLQLFNHFDSSPK 129

Query: 2439 PLFTLFRWAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNLDTFAIM 2260
            PLFTL+ WAEK+  F+FS+ VFNA+VN+LGK REFDSAW+LIL  + +++ PNLDTFAIM
Sbjct: 130  PLFTLYLWAEKKEWFKFSLPVFNAVVNALGKEREFDSAWNLILDRLNSTERPNLDTFAIM 189

Query: 2259 IRRYARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRK 2080
            IRRYARAGM LPA+RTYEF+S LEI HAL  +  LFEILLDSLCKEGL+R AS+YF +RK
Sbjct: 190  IRRYARAGMLLPAVRTYEFSSNLEI-HALGLEDNLFEILLDSLCKEGLIREASDYFYRRK 248

Query: 2079 GEVPSWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGR 1900
            G+  +W PS RVYNILLNGWFRSRKLKKAERLW EMK+E I PSVVTYGTLVEG CRM R
Sbjct: 249  GQDSNWSPSIRVYNILLNGWFRSRKLKKAERLWTEMKKEGIKPSVVTYGTLVEGLCRMRR 308

Query: 1899 VEIAMELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNS 1720
            VE+A+ELI EM++EG+ PNA++YNPVIDALGE GRFK+AS MMER +VLESGPT+STYNS
Sbjct: 309  VEMAIELIDEMKEEGIPPNAVVYNPVIDALGEAGRFKEASGMMERLLVLESGPTLSTYNS 368

Query: 1719 LIKGFCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESG 1540
            L+KGFCKAGD+ GASKILK+MINRG +P+ TTYNYFFR+FSKFGKIEEGLNLYTKLIESG
Sbjct: 369  LVKGFCKAGDIVGASKILKMMINRGLMPTPTTYNYFFRYFSKFGKIEEGLNLYTKLIESG 428

Query: 1539 YEPDRLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAF 1360
            Y  DRLTYHLLVKMLCEQ RLNL++QII+EMR +G+DLDLAT+TMLIHL  K+HQFD+A 
Sbjct: 429  YVADRLTYHLLVKMLCEQDRLNLALQIIQEMRTKGFDLDLATSTMLIHLFCKMHQFDEAV 488

Query: 1359 GEFEAMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTYV 1195
              F  MIRRGLVPQYLTY+++  +L  QGM   A+KL   M S P+S  LPNTY+
Sbjct: 489  EWFHDMIRRGLVPQYLTYQRLCNDLAKQGMNDKAEKLRNTMVSTPYSEKLPNTYI 543



 Score = 57.4 bits (137), Expect(2) = 0.0
 Identities = 28/54 (51%), Positives = 41/54 (75%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKRV 1028
            +SH++R S++ KAE +S+IL+TC +PR+L K R P E+ V SAN  I+ IS+RV
Sbjct: 548  TSHSKRKSIIAKAEEMSNILQTCRSPRQLIKRRTPPENAVLSANQLIENISERV 601


>ref|XP_004241813.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
            mitochondrial-like [Solanum lycopersicum]
          Length = 602

 Score =  667 bits (1722), Expect(2) = 0.0
 Identities = 340/535 (63%), Positives = 416/535 (77%), Gaps = 5/535 (0%)
 Frame = -3

Query: 2784 RRDFLSLMTILRRATT---TVRRYSTQS-SAAIRGKPKWPLSK-SKPDXXXXXXXXXXXX 2620
            RR  +SL +++   TT   T + +STQS   + RGKP   L K + P             
Sbjct: 10   RRSIISLTSLVSHLTTKNPTFKLFSTQSWLKSTRGKPLMKLPKLNYPPKQPTPLFSPPPS 69

Query: 2619 XXXXXXPNFNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPK 2440
                  PN+  ++FT L ++L +  + PGP LENAL+   I+  E + L++FNH DSSPK
Sbjct: 70   THQPETPNYCPTDFTTLSEILRDPTIPPGPALENALDRAGIEVNECMFLQLFNHFDSSPK 129

Query: 2439 PLFTLFRWAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNLDTFAIM 2260
            PLFTL+ WAEK+  F+FS+ VFNA+VN+LGK REFDSAW+LIL  + +++ PNL TFAIM
Sbjct: 130  PLFTLYLWAEKKEWFKFSLPVFNAVVNALGKEREFDSAWNLILDRLNSTERPNLGTFAIM 189

Query: 2259 IRRYARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRK 2080
            IRRY+RAGM LPAIRTYEF++ LEI H L  +  LFEILLDSLCKEG +R AS+YF +RK
Sbjct: 190  IRRYSRAGMLLPAIRTYEFSTNLEI-HGLGLEDNLFEILLDSLCKEGHIREASDYFYRRK 248

Query: 2079 GEVPSWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGR 1900
            G+  +W PS RVYNILLNGWFRSRKLKKAERLW EMK+E I PSVVTYGTLVEG CRM R
Sbjct: 249  GKDLNWSPSIRVYNILLNGWFRSRKLKKAERLWTEMKKEGIKPSVVTYGTLVEGLCRMRR 308

Query: 1899 VEIAMELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNS 1720
            VE+A+ELI EM++EG+ PN ++YNPVIDALGE GRFK+AS MMER +VLESGPT+STYNS
Sbjct: 309  VEMAIELIDEMKEEGIHPNVVVYNPVIDALGEAGRFKEASGMMERLLVLESGPTLSTYNS 368

Query: 1719 LIKGFCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESG 1540
            L+KGFCKAGD+ GASKILK+MI+RGF+P+ TTYNYFFR+FSKFGKIEEGLNLYTKLIESG
Sbjct: 369  LVKGFCKAGDIAGASKILKMMIDRGFMPTPTTYNYFFRYFSKFGKIEEGLNLYTKLIESG 428

Query: 1539 YEPDRLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAF 1360
            Y  DRLTYHLLVKMLCEQ RL+L++QII+EMR +G+DLDLAT+TMLIHL  K+HQFD+A 
Sbjct: 429  YVADRLTYHLLVKMLCEQDRLDLALQIIQEMRTKGFDLDLATSTMLIHLFCKMHQFDEAV 488

Query: 1359 GEFEAMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTYV 1195
              F  MIRRG+VPQYLTY+++  +L  QGM   A+KL  MM S P++  LPNTY+
Sbjct: 489  EWFHDMIRRGVVPQYLTYQRLCNDLAKQGMNDNAEKLRNMMVSTPYAEKLPNTYI 543



 Score = 57.8 bits (138), Expect(2) = 0.0
 Identities = 28/54 (51%), Positives = 41/54 (75%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKRV 1028
            +SH+RR S++ KAE +S+I++TC +PR+L K R P E+ V SAN  I+ IS+RV
Sbjct: 548  TSHSRRKSIIAKAEEMSNIIQTCRSPRQLIKRRTPPENAVLSANQLIENISERV 601


>gb|EMJ23233.1| hypothetical protein PRUPE_ppa003040mg [Prunus persica]
          Length = 609

 Score =  657 bits (1694), Expect(2) = 0.0
 Identities = 330/544 (60%), Positives = 413/544 (75%), Gaps = 13/544 (2%)
 Frame = -3

Query: 2781 RDFLSLMTILRRATT-------TVRRYSTQSSAAIRGKP--KWPLSKSKP-DXXXXXXXX 2632
            R FLSL  +L +          ++R +S QS  ++RG P  KWP     P          
Sbjct: 7    RHFLSLALLLFKPNPNLNLRALSLRFFSNQSWLSVRGNPIIKWPSPPDIPCSLPHPNPAP 66

Query: 2631 XXXXXXXXXXPNFNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLD 2452
                      PNF+ ++F+ + ++L + ++ PG  L++AL+ T I+P   LL  +F+H D
Sbjct: 67   NPNPNPNSSGPNFSQNDFSTIANVLADPSISPGSSLQSALDRTGIEPGPCLLQAVFDHFD 126

Query: 2451 SSPKPLFTLFRWAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL-- 2278
            SSPK L TLF WAEK+PGF  S  +F  M+N L K+REF+SAWSLIL+ I   + P L  
Sbjct: 127  SSPKLLHTLFLWAEKRPGFRSSATLFGCMINVLAKSREFESAWSLILNRIGGDEEPGLVS 186

Query: 2277 -DTFAIMIRRYARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIAS 2101
             DTF IMIRRY+RAGM   AIRT+EFAS L+     +S+  LFE+LLDSLCKEGLVR+AS
Sbjct: 187  VDTFVIMIRRYSRAGMSQSAIRTFEFASNLDSFLNSESEMSLFEVLLDSLCKEGLVRVAS 246

Query: 2100 EYFEKRKGEVPSWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVE 1921
            EYF+ ++   P WIPS RVYNILLNGWFRSRKLK+AERLW EMKR+N+ PSVVTYGTL+E
Sbjct: 247  EYFDMKRKLHPDWIPSVRVYNILLNGWFRSRKLKRAERLWAEMKRDNVKPSVVTYGTLIE 306

Query: 1920 GYCRMGRVEIAMELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGP 1741
            GYCRM R EIA+EL++EMR EG+EPNAI+YN +IDALGE G+FK+A  MME F+VLESGP
Sbjct: 307  GYCRMRRAEIAIELVSEMRSEGIEPNAIVYNAIIDALGEAGKFKEALGMMEHFLVLESGP 366

Query: 1740 TVSTYNSLIKGFCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLY 1561
            T+STYNSL KGFCKAGDL GASKILK+MI++G +P+ TTYNYFFR+FSKFGKIEEG+NLY
Sbjct: 367  TISTYNSLAKGFCKAGDLVGASKILKMMISKGCVPTPTTYNYFFRYFSKFGKIEEGMNLY 426

Query: 1560 TKLIESGYEPDRLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKL 1381
            TK+IESGY PDRLT+HLL+KMLC++GRL L++Q+ KEMR RG D+DLAT+TMLIHLL  +
Sbjct: 427  TKMIESGYTPDRLTFHLLLKMLCDEGRLGLAVQVSKEMRSRGLDMDLATSTMLIHLLCNV 486

Query: 1380 HQFDKAFGEFEAMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNT 1201
            H+F +AF EFE MIRRGLVPQYLT+++M+ EL+ QGMT+MA K+  MM+SVPHS NLPNT
Sbjct: 487  HKFKEAFAEFEDMIRRGLVPQYLTFQRMNVELRKQGMTEMAHKMCNMMSSVPHSTNLPNT 546

Query: 1200 YVAQ 1189
            YV +
Sbjct: 547  YVRE 550



 Score = 65.1 bits (157), Expect(2) = 0.0
 Identities = 31/57 (54%), Positives = 44/57 (77%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKRVNSQ 1019
            +SHARR S++ KAEA+SD+LKTCS+PR+L K R+  E+VVS AN  ++ I ++ N Q
Sbjct: 553  ASHARRKSIIQKAEAMSDLLKTCSDPRELVKYRSLPENVVSRANQLVEDIKRKANIQ 609


>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
            mitochondrial [Vitis vinifera]
            gi|296081989|emb|CBI20994.3| unnamed protein product
            [Vitis vinifera]
          Length = 597

 Score =  642 bits (1657), Expect(2) = 0.0
 Identities = 307/470 (65%), Positives = 388/470 (82%), Gaps = 3/470 (0%)
 Frame = -3

Query: 2598 NFNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFR 2419
            NF+ S+F+ +  LLT+  L  G  LE+ALN T I P   LL  IF+H D+SPKPLFTLFR
Sbjct: 66   NFSQSDFSTICALLTDPALSSGAPLEDALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFR 125

Query: 2418 WAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRY 2248
            WA KQPGFE S+ +FN+M++ L K+R FDSAW L+L  I+  + P L   +TFA++IRRY
Sbjct: 126  WAMKQPGFESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRY 185

Query: 2247 ARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVP 2068
            ARAGM L AIRT+EFA  L+ +   DS+W LF+ILLDSLCKEG VR+ASEYF++++G  P
Sbjct: 186  ARAGMTLSAIRTFEFAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDP 245

Query: 2067 SWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIA 1888
            SW+PS RVYN+LLNGWFRSRKLK+AE+LW  MKREN+ P+VVTYGTLVEGYCRM R E A
Sbjct: 246  SWVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKA 305

Query: 1887 MELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKG 1708
            +EL+ EMR +G+EPN I+YNP+ID+L E GRFK+A  MMER +V E+GPT+STYNSL+KG
Sbjct: 306  IELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKG 365

Query: 1707 FCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPD 1528
            FCKAGDL GASK+LK+MI+RGF P++TTYNYFFR+FS+ GK EEG+NLYTK+IESG+ PD
Sbjct: 366  FCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPD 425

Query: 1527 RLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFE 1348
            RLTYHLL+KM+CE+ RL+L++Q+ KEMR RG DLDLAT+TML+HLL K+H+ ++AF EFE
Sbjct: 426  RLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFE 485

Query: 1347 AMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
             MIRRG+VPQYLT+E+M+  L+ +G+T+MA+KL  MMASVPHS+ LPNTY
Sbjct: 486  DMIRRGIVPQYLTFERMNNALRKRGLTEMARKLCDMMASVPHSSKLPNTY 535



 Score = 55.8 bits (133), Expect(2) = 0.0
 Identities = 26/55 (47%), Positives = 40/55 (72%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKRVN 1025
            +S AR+ S++ +AEA+SDILKTC++PR+L K R+  E+ V  A+  I+ I +R N
Sbjct: 541  ASRARKTSIIQRAEAMSDILKTCNDPRELVKRRSSFENTVLVADQLIEDIKRRAN 595



 Score = 73.6 bits (179), Expect = 5e-10
 Identities = 64/311 (20%), Positives = 131/311 (42%), Gaps = 11/311 (3%)
 Frame = -3

Query: 2070 PSWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVV---TYGTLVEGYCRMGR 1900
            P +  S  ++N +++   +SR    A  L ++       P +V   T+  L+  Y R G 
Sbjct: 131  PGFESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRYARAGM 190

Query: 1899 VEIAMEL------IAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESG-- 1744
               A+        +  +R    E +  ++  ++D+L ++G  + AS+  ++   L+    
Sbjct: 191  TLSAIRTFEFAFSLDSIRDRDSEWS--LFKILLDSLCKEGHVRVASEYFDQQRGLDPSWV 248

Query: 1743 PTVSTYNSLIKGFCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNL 1564
            P++  YN L+ G+ ++  L+ A ++ + M      P++ TY      + +  + E+ + L
Sbjct: 249  PSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIEL 308

Query: 1563 YTKLIESGYEPDRLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLK 1384
              ++   G EP+ + Y+ ++  L E GR   +M +++   +      ++T   L+    K
Sbjct: 309  VGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGFCK 368

Query: 1383 LHQFDKAFGEFEAMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPN 1204
                  A    + MI RG  P   TY    +     G T+    L   M    H+ +   
Sbjct: 369  AGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLT 428

Query: 1203 TYVAQVHMLEE 1171
             ++    M EE
Sbjct: 429  YHLLIKMMCEE 439


>gb|EXC20787.1| hypothetical protein L484_007369 [Morus notabilis]
          Length = 612

 Score =  629 bits (1621), Expect(2) = 0.0
 Identities = 321/557 (57%), Positives = 410/557 (73%), Gaps = 24/557 (4%)
 Frame = -3

Query: 2796 LALHRRDFLSLMTILRRATT---------TVRRYSTQSSA-----AIRGKP--KWP---- 2677
            L   RR F+SL + + +            T+R +S+ S++     ++ GKP  +WP    
Sbjct: 7    LLFKRRHFISLTSPIFQPNPNPNPNLQFHTLRFFSSSSASGLSWLSVPGKPLIRWPHEPC 66

Query: 2676 -LSKSKPDXXXXXXXXXXXXXXXXXXPNFNSSEFTCLRDLLTNQNLKPGPELENALNLTR 2500
             +   +PD                    F+ +EF  + ++LTN N+  G  L  AL+ T 
Sbjct: 67   SVPNPQPDPNPSPNPGA----------EFSQNEFAAISEVLTNPNISGGFSLHTALDRTG 116

Query: 2499 IDPTEALLLEIFNHLDSSPKPLFTLFRWAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWS 2320
            I+P+ +LL  +F+H DSSPK L++LF WAEKQPG+  S ++F +++N L K+REFDSAWS
Sbjct: 117  IEPSPSLLQAVFDHFDSSPKLLYSLFLWAEKQPGYRSSASLFASVINVLAKSREFDSAWS 176

Query: 2319 LILHHIKASKSPNL---DTFAIMIRRYARAGMPLPAIRTYEFASKLEILHALDSDWKLFE 2149
            LILH I   + P L   DTF IMIRRYAR GMP  A+RT+EFAS    + +  S+  LF 
Sbjct: 177  LILHRIGKEEEPRLVCEDTFVIMIRRYAREGMPQSAVRTFEFASNSVPICSYISEISLFG 236

Query: 2148 ILLDSLCKEGLVRIASEYFEKRKGEVPSWIPSTRVYNILLNGWFRSRKLKKAERLWMEMK 1969
            ILLD+LCKEG VR AS+YF ++K   PSWIPS R YNILLNGWFRSRKLK+AERLWMEMK
Sbjct: 237  ILLDALCKEGHVRAASDYFNEKKKLDPSWIPSIRAYNILLNGWFRSRKLKRAERLWMEMK 296

Query: 1968 RENIIPSVVTYGTLVEGYCRMGRVEIAMELIAEMRKEGLEPNAIIYNPVIDALGEDGRFK 1789
            R+N+  +VVTYGTLVEGYCRM R EIA+EL+ EMR EG+EPNAI+YNP+IDALGE GRFK
Sbjct: 297  RDNVRSTVVTYGTLVEGYCRMRRAEIAVELVKEMRTEGIEPNAIVYNPIIDALGEAGRFK 356

Query: 1788 DASDMMERFMVLESGPTVSTYNSLIKGFCKAGDLQGASKILKLMINRGFLPSMTTYNYFF 1609
            +A  MMERF+VLESGPT+STYNSL+KGFCKAG+L GASKI+K+MI RG +P+ TTYNYFF
Sbjct: 357  EALGMMERFLVLESGPTISTYNSLVKGFCKAGNLAGASKIIKMMIGRGIIPTPTTYNYFF 416

Query: 1608 RHFSKFGKIEEGLNLYTKLIESGYEPDRLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYD 1429
            ++FSKFGKIEEG+NLYTK+I SG+ PDRLTYHLL+KMLCE+G+L+L++Q+ KEMR RG+D
Sbjct: 417  KYFSKFGKIEEGMNLYTKMIGSGHSPDRLTYHLLLKMLCEEGKLDLAVQVGKEMRSRGFD 476

Query: 1428 LDLATATMLIHLLLKLHQFDKAFGEFEAMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKL 1249
            +DLAT+TMLIHL   + +F++A+ EF  MIRRG+VPQYLTY +M  ELK +GMT+M  KL
Sbjct: 477  MDLATSTMLIHLFCNMRRFEEAYLEFGDMIRRGIVPQYLTYHRMKDELKKRGMTEMVSKL 536

Query: 1248 SVMMASVPHSNNLPNTY 1198
              +M+SVPHS  LPNTY
Sbjct: 537  RDLMSSVPHSTKLPNTY 553



 Score = 55.8 bits (133), Expect(2) = 0.0
 Identities = 29/53 (54%), Positives = 35/53 (66%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKR 1031
            +S  RR SVM KAEAISD+LKTC   R+L   R P E+ VS AN  I+ I K+
Sbjct: 559  ASSDRRNSVMRKAEAISDMLKTCKESRELVNYRGPFENAVSLANRLIEDIQKK 611


>ref|XP_004292965.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 582

 Score =  628 bits (1619), Expect(2) = 0.0
 Identities = 313/512 (61%), Positives = 392/512 (76%), Gaps = 5/512 (0%)
 Frame = -3

Query: 2715 QSSAAIRGKP--KWPLSKSKPDXXXXXXXXXXXXXXXXXXPNFNSSEFTCLRDLLTNQNL 2542
            QS  ++ G P  KWP     P                     F+ ++F+ +  LLT+ ++
Sbjct: 13   QSWLSVPGNPLIKWPSLSPPPSPPPTLPPPNPNPNFDP---KFSENDFSTITKLLTDPSI 69

Query: 2541 KPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFRWAEKQPGFEFSVAVFNAMV 2362
             PG  L +AL+   IDP+ +L+  +F+H DSSPK L TLF WAE+QPGF  SV +F +++
Sbjct: 70   FPGASLRSALDRVGIDPSPSLVQAVFDHFDSSPKLLHTLFVWAEEQPGFRCSVKLFTSVI 129

Query: 2361 NSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRYARAGMPLPAIRTYEFASKL 2191
            N L KAREF+SAWS+IL  I   K   L   D F IMIRRYARAG P  AIR +EFA+ L
Sbjct: 130  NVLAKAREFESAWSMILDRIGGDKEAGLVSVDAFVIMIRRYARAGQPQSAIRAFEFATNL 189

Query: 2190 EILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVPSWIPSTRVYNILLNGWFRS 2011
            +   + +S+  LFEILLDSLCKEGLVR+A+EYF+ ++     WIPS RVYNILLNGWFRS
Sbjct: 190  DSFLSSESEMSLFEILLDSLCKEGLVRVATEYFDGKRKSHRDWIPSVRVYNILLNGWFRS 249

Query: 2010 RKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIAMELIAEMRKEGLEPNAIIY 1831
            RKLKKAERLW+EMK + + PSVVTYGTLVEGYCRM R EIAMEL+ EMR+EG+EPNAI++
Sbjct: 250  RKLKKAERLWVEMKSDGVKPSVVTYGTLVEGYCRMRRPEIAMELVGEMRREGVEPNAIVF 309

Query: 1830 NPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKGFCKAGDLQGASKILKLMIN 1651
            NP+IDALGE GRFK+A  MMERF VLESGPT+STYNSL+KG+CKAG+L  AS+ILK+MI+
Sbjct: 310  NPIIDALGEAGRFKEAWGMMERFSVLESGPTISTYNSLVKGYCKAGNLVEASRILKMMIS 369

Query: 1650 RGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPDRLTYHLLVKMLCEQGRLNL 1471
            RG +P+  TYNYFFR+FSK GKIEEG+NLYTK+IESGY PDRLT+HLL+KMLCE+GRL+L
Sbjct: 370  RGIVPTPATYNYFFRYFSKSGKIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCEEGRLDL 429

Query: 1470 SMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFEAMIRRGLVPQYLTYEKMSK 1291
            ++Q+ KEMR RG D+DLAT+TMLIHLL K+++F +A  EFE MIR+GLVPQYLT++ M+ 
Sbjct: 430  AVQVSKEMRTRGCDMDLATSTMLIHLLCKMNKFKEALSEFEDMIRKGLVPQYLTFQNMND 489

Query: 1290 ELKNQGMTKMAQKLSVMMASVPHSNNLPNTYV 1195
            EL+ QGMT+MA+KL  +M+SVPHS  LPNTYV
Sbjct: 490  ELRKQGMTEMARKLCALMSSVPHSTKLPNTYV 521



 Score = 55.5 bits (132), Expect(2) = 0.0
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = -2

Query: 1186 SHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKRVN 1025
            SH RR S++ KAEA+S +LKTCS+PR+L K R+  E V S AN  I+ I  + N
Sbjct: 527  SHERRKSIIKKAEAMSKVLKTCSDPRELVKHRSSPESVESRANRLIEDIKTKAN 580


>ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
            mitochondrial-like [Cucumis sativus]
            gi|449503560|ref|XP_004162063.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g11310,
            mitochondrial-like [Cucumis sativus]
          Length = 615

 Score =  600 bits (1548), Expect(2) = 0.0
 Identities = 300/517 (58%), Positives = 384/517 (74%), Gaps = 9/517 (1%)
 Frame = -3

Query: 2721 STQSSAAIRGKP--KWPLSKSKPDXXXXXXXXXXXXXXXXXXPNFNSS----EFTCLRDL 2560
            S  S  +  GKP  KWP    +P                     F +S    + + +  +
Sbjct: 36   SPHSWLSTPGKPLVKWPSLPDQPANPLPSNSAVISNPNSAIDVKFEASYSPNDLSTISSI 95

Query: 2559 LTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFRWAEKQPGFEFSVA 2380
            L++++++PG  LE+AL+ T I P+ +LL  +F+H DSSPK L +LF WA K+ GF  S A
Sbjct: 96   LSDRSVRPGAALEDALDRTGIVPSSSLLEAVFDHFDSSPKFLHSLFLWAAKKSGFRPSAA 155

Query: 2379 VFNAMVNSLGKAREFDSAWSLILHHIKASKSP---NLDTFAIMIRRYARAGMPLPAIRTY 2209
            +FN ++N L K+REFDSAWSLI   ++  +     +++ F I+IRRYARAGM  PAIRTY
Sbjct: 156  LFNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTY 215

Query: 2208 EFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVPSWIPSTRVYNILL 2029
            EFA  LE +    S+  LFEILLDSLCKEG VR+ASEYF +++    S+ PS R YNIL+
Sbjct: 216  EFACNLETISGTGSEG-LFEILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILI 274

Query: 2028 NGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIAMELIAEMRKEGLE 1849
            NGWFRSRKLK A+RLW EMK+  I P+VVTYGTL+EGYCRM  VEIA+EL+ EMR+EG+E
Sbjct: 275  NGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIE 334

Query: 1848 PNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKGFCKAGDLQGASKI 1669
            PNAI+YNP++DALGE GRFK+A  MMERFMVLE GPT+STYNSL+KG+CKAGDL GASKI
Sbjct: 335  PNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKI 394

Query: 1668 LKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPDRLTYHLLVKMLCE 1489
            LK+MI RGF P+ TTYNYFFR FSK+GKIEE ++LY K+IESGY PD+LTYHLL+KMLCE
Sbjct: 395  LKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCE 454

Query: 1488 QGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFEAMIRRGLVPQYLT 1309
            + RLNL++Q+  EM+ RG+D+DLAT+TML+HLL K+H+F++AF EFE MI RG+VPQYLT
Sbjct: 455  EERLNLAVQVCNEMKARGFDMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQYLT 514

Query: 1308 YEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
            + ++  E   +G+TKMA KL  MM+SVPHS  LP+TY
Sbjct: 515  FCRLHDEFMKRGLTKMASKLQEMMSSVPHSEKLPDTY 551



 Score = 63.5 bits (153), Expect(2) = 0.0
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKRVN 1025
            S  ARR S+M KAEA+S++LK C +PR+L K R+P ED V SAN  ID I K+ N
Sbjct: 557  SIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSEDAVFSANKLIDDIKKKAN 611


>ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544438|gb|EEF45959.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 577

 Score =  605 bits (1559), Expect(2) = e-180
 Identities = 297/467 (63%), Positives = 376/467 (80%)
 Frame = -3

Query: 2598 NFNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFR 2419
            N++ S+F+ L +LL++ NLKP   LE AL+ T I P  +LL  +F+H +SSPK L +LF 
Sbjct: 55   NYSHSDFSTLCNLLSDPNLKP---LETALDQTGIKPETSLLNAVFDHFNSSPKLLHSLFV 111

Query: 2418 WAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNLDTFAIMIRRYARA 2239
            WA+KQP FE S  +FN+++N+LGK +EFDSAW L+L       S   DTFAI+IRRY RA
Sbjct: 112  WADKQPEFESSTTLFNSVINALGKMKEFDSAWCLVLDRTGLVSS---DTFAILIRRYTRA 168

Query: 2238 GMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVPSWI 2059
            GMP  AIRT+E+A  L+ +   + D  L EILLDSLCKEG VR+A EYF+ RK     WI
Sbjct: 169  GMPQSAIRTFEYAISLDFICDYNCD-ALLEILLDSLCKEGHVRVAKEYFDSRKQLDSCWI 227

Query: 2058 PSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIAMEL 1879
            P  R+YNI+LNGWFRSRKLK AERLW+EMK+ N+ PSVVTYGTLVEGYCRM RVE A+EL
Sbjct: 228  PHVRIYNIMLNGWFRSRKLKHAERLWLEMKKNNVSPSVVTYGTLVEGYCRMRRVERAIEL 287

Query: 1878 IAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKGFCK 1699
            +  MRKEG+EPNA++YNP+IDAL E+GRFK+ S MME F+  ESGPT+STYNSL+KG+CK
Sbjct: 288  VDVMRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTISTYNSLVKGYCK 347

Query: 1698 AGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPDRLT 1519
            A D  GASK+LK+MI+RGF+P+ TTYNYFFRHFSKFG IEEG+NLYTK+IESGY PDRLT
Sbjct: 348  AKDPVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLT 407

Query: 1518 YHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFEAMI 1339
            +HLL+KMLCE+ RL+L++QI KEMR RG D+DLAT+TMLIHL  ++H+F++AF EFE MI
Sbjct: 408  FHLLLKMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLFCRMHRFEEAFMEFEDMI 467

Query: 1338 RRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
            ++G+VPQYLT+++++ EL+ +GM + A+KLS MM+SVPHS NLPNTY
Sbjct: 468  QKGIVPQYLTFQRLNDELRKRGMVERARKLSDMMSSVPHSTNLPNTY 514



 Score = 56.2 bits (134), Expect(2) = e-180
 Identities = 27/52 (51%), Positives = 40/52 (76%)
 Frame = -2

Query: 1180 ARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKRVN 1025
            ARR S++ KAEA+S ILKTC++PR+L KL++  ++ ++SA   I+ I KRVN
Sbjct: 524  ARRSSILQKAEAMSKILKTCNDPRELVKLKSSSQNPITSAIQLIENIRKRVN 575


>ref|XP_002308636.1| hypothetical protein POPTR_0006s26360g [Populus trichocarpa]
            gi|222854612|gb|EEE92159.1| hypothetical protein
            POPTR_0006s26360g [Populus trichocarpa]
          Length = 607

 Score =  604 bits (1558), Expect(2) = e-179
 Identities = 302/546 (55%), Positives = 402/546 (73%), Gaps = 9/546 (1%)
 Frame = -3

Query: 2808 ETNRLALHRRDFLSLMTILRRATTTVRRYSTQSSA----AIRGKP--KWPLSKSKPDXXX 2647
            +++ +  H+   L  + +  R     R +S  SSA    A++G P  KWP + +      
Sbjct: 2    KSSLINFHKNTTLLYVFLTTRKPPHNRHFSAVSSAESWLAVQGNPLIKWPHNPNLAPSPS 61

Query: 2646 XXXXXXXXXXXXXXXPNFNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEI 2467
                            N++ ++F  L ++L +  ++ GP L  AL+ T I+P   L+  +
Sbjct: 62   ADQQNSSPTSNSNP--NYHQNDFFTLCNILKDPKIQLGPSLRTALDRTGIEPELGLIQSV 119

Query: 2466 FNHLDSSPKPLFTLFRWAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKS 2287
            F+H DSSPK L ++F WAEK+PGF+ S A+FN+MVN LGKAREF SAW L+L  I  ++ 
Sbjct: 120  FDHFDSSPKLLHSVFLWAEKKPGFQSSAALFNSMVNFLGKAREFGSAWCLLLDRIGGNEG 179

Query: 2286 PNL---DTFAIMIRRYARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGL 2116
             +L   DTFAI+IRRY RAGM   AIRT+E+AS L+++H  ++   LFEILLDSLCKEG 
Sbjct: 180  GDLVSSDTFAILIRRYTRAGMSEAAIRTFEYASSLDLIHNSEAGTSLFEILLDSLCKEGH 239

Query: 2115 VRIASEYFEKRKGEVPSWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTY 1936
            VR+A++YF+++  + P W+PS R+YNILLNGWFRSRKLK AERLW+EMK++N+ PSVVTY
Sbjct: 240  VRVATDYFDRKVEKDPCWVPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTY 299

Query: 1935 GTLVEGYCRMGRVEIAMELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMV 1756
            GTLVEGY RM RVE A+EL+ EM++EG++ NAI+YNP+IDAL E GRFK+   MME F +
Sbjct: 300  GTLVEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFL 359

Query: 1755 LESGPTVSTYNSLIKGFCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEE 1576
             E GPT+STYNSL+KG+CKAGDL GASKILK+MI+R   P+ TTYNYFFRHFSK  KIEE
Sbjct: 360  CEEGPTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRKIEE 419

Query: 1575 GLNLYTKLIESGYEPDRLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIH 1396
            G+NLYTK+IESGY PDRLTYHLL+KMLCE+ RL+L++QI KEMR RG D+DLAT+TM  H
Sbjct: 420  GMNLYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMRARGCDMDLATSTMFTH 479

Query: 1395 LLLKLHQFDKAFGEFEAMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSN 1216
            LL K+ +F++AF EFE M+RRG+VPQYLT+ +++ E + QG+T++A++L  +M+SV HS 
Sbjct: 480  LLCKMQRFEEAFAEFEDMLRRGIVPQYLTFHRLNDEFRKQGLTELARRLCKLMSSVSHSK 539

Query: 1215 NLPNTY 1198
            NLPNTY
Sbjct: 540  NLPNTY 545



 Score = 54.7 bits (130), Expect(2) = e-179
 Identities = 27/56 (48%), Positives = 39/56 (69%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKRVNS 1022
            S HARR S++ KA  +S+ILKTC++PR+L K R+  ++  SSAN  I+ I KR  +
Sbjct: 552  SRHARRKSILQKAGVMSEILKTCNDPRELVKHRSSSQNPESSANQLIEDIKKRAKT 607


>ref|XP_004498635.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
            mitochondrial-like [Cicer arietinum]
          Length = 596

 Score =  607 bits (1566), Expect(2) = e-178
 Identities = 301/469 (64%), Positives = 372/469 (79%), Gaps = 6/469 (1%)
 Frame = -3

Query: 2586 SEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFRWAEK 2407
            S F+ +  L TN ++ PG +L   LN T I P   LL  +F+H  SSPK L +LF WA+K
Sbjct: 69   SNFSLISTLFTNPSISPGSQLHAQLNRTGIKPDSPLLRAVFDHFASSPKLLHSLFLWADK 128

Query: 2406 QPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHI------KASKSPNLDTFAIMIRRYA 2245
            QPGF+    +F++MVN+L K +EFDSAW+L+L  I      K  K  ++ TFAI+IRRYA
Sbjct: 129  QPGFKPDPTLFDSMVNALAKIKEFDSAWTLVLDRIHREEEEKEDKLVSIGTFAILIRRYA 188

Query: 2244 RAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVPS 2065
            RAGM   AIRT+EFA   + +    S+  LF IL+DSLCKEG VR ASEYF +RK     
Sbjct: 189  RAGMHEAAIRTFEFAKDKKSIVDSMSEMSLFGILIDSLCKEGSVREASEYFLRRKETDLG 248

Query: 2064 WIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIAM 1885
            W+PSTRVYNI+LNGWFR+RKLK AERLW EMK+EN+ PSVVTYGTLVEGYCRM RVE A+
Sbjct: 249  WVPSTRVYNIMLNGWFRARKLKHAERLWEEMKKENVKPSVVTYGTLVEGYCRMRRVEKAL 308

Query: 1884 ELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKGF 1705
            E++ EM KEG+E NAI+YNP+IDAL E GRFK+A  MMERF VL+ GPT+STYNSL+KGF
Sbjct: 309  EMVGEMTKEGIEANAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGF 368

Query: 1704 CKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPDR 1525
            CKAGDL+GASKILK MI+RGFLP  TTYNYFFR+FS+ GKIEEG+NLYTK+IESG+ PDR
Sbjct: 369  CKAGDLEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKIEEGMNLYTKMIESGHTPDR 428

Query: 1524 LTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFEA 1345
            LTYHL++KMLCE+ RL+L++Q+ KEMR  GYD+DLAT+TMLIHLL K+H+ ++AF EFE 
Sbjct: 429  LTYHLVLKMLCEEERLDLAVQVSKEMRHNGYDMDLATSTMLIHLLCKMHRLEEAFAEFED 488

Query: 1344 MIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
            MIRRG+VPQYLT++K++ ELK QGMT+M+QKL  +M++VPHS NLPNTY
Sbjct: 489  MIRRGIVPQYLTFQKLNVELKKQGMTEMSQKLCHLMSNVPHSTNLPNTY 537



 Score = 46.6 bits (109), Expect(2) = e-178
 Identities = 24/55 (43%), Positives = 39/55 (70%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKRVN 1025
            ++HA R S++ KA+A+SD+LK   +P++L K R+  E+ VS AN  I+ I KR++
Sbjct: 543  NAHAHRKSIIQKAQAVSDLLK---DPKELDKFRSSSENDVSIANCLIEDIKKRID 594


>gb|ESW33251.1| hypothetical protein PHAVU_001G055200g [Phaseolus vulgaris]
          Length = 606

 Score =  598 bits (1543), Expect(2) = e-175
 Identities = 297/471 (63%), Positives = 370/471 (78%), Gaps = 6/471 (1%)
 Frame = -3

Query: 2592 NSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFRWA 2413
            N + F+ + +L T+ ++ PGP L   L+ + I+P  ALLL +F+   SSPK L +LF WA
Sbjct: 78   NLNAFSLISNLFTDPSVSPGPVLHAKLDRSAIEPDPALLLALFDRFGSSPKLLHSLFLWA 137

Query: 2412 EKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSP------NLDTFAIMIRR 2251
            + +PGF     +F+A+VN+L KA+EFD+AW L+L ++            ++ TFAIMIRR
Sbjct: 138  QTRPGFRPGPKLFDAVVNALAKAKEFDAAWKLVLDNVDGDGEEENESLVSVGTFAIMIRR 197

Query: 2250 YARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEV 2071
            YARAGM   AIRTYEFA   + +    S+  LFEIL+DSLCKEG VR ASEYF  RK   
Sbjct: 198  YARAGMSKLAIRTYEFARNNKSIVDSGSEMSLFEILMDSLCKEGSVREASEYFLWRKELD 257

Query: 2070 PSWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEI 1891
             SW+PS RVYNI+LNGWFRSRKLK+ ERLW EMK+EN+ PSVVTYGTLVEGYCRM RVE 
Sbjct: 258  LSWVPSIRVYNIMLNGWFRSRKLKQGERLWEEMKKENVRPSVVTYGTLVEGYCRMRRVEK 317

Query: 1890 AMELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIK 1711
            A+E++ +M KEG+ PN I+YNP+IDAL E GRFK+A  M+ERF +LE GPT STYNSLIK
Sbjct: 318  ALEMVGDMTKEGIAPNVIVYNPIIDALAEAGRFKEALGMLERFHILEIGPTDSTYNSLIK 377

Query: 1710 GFCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEP 1531
            G+CKA DL GASKILK+MI+RGF+PS TTYNYFFR+FS+ GKIEEG+NLY K+IESGY P
Sbjct: 378  GYCKAADLAGASKILKMMISRGFIPSPTTYNYFFRYFSRCGKIEEGMNLYRKMIESGYTP 437

Query: 1530 DRLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEF 1351
            DRLTYHLLVKMLCE+G+L+L++Q+ KEMR  GYD+DLAT+TMLIHLL K+H+ ++AF EF
Sbjct: 438  DRLTYHLLVKMLCEEGKLDLAVQVSKEMRHNGYDMDLATSTMLIHLLCKMHRLEEAFAEF 497

Query: 1350 EAMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
            E MIRRG+VPQYLT++ M  ELK QGMT+MAQKL  +M+SVP+S+NLPNTY
Sbjct: 498  EDMIRRGIVPQYLTFQGMKAELKKQGMTEMAQKLCKLMSSVPYSDNLPNTY 548



 Score = 46.6 bits (109), Expect(2) = e-175
 Identities = 22/46 (47%), Positives = 33/46 (71%)
 Frame = -2

Query: 1177 RRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGI 1040
            RR S++ KA+A SD+LK C +P +L + +N  E+ VSSAN+ I+ I
Sbjct: 558  RRKSIIRKAKAFSDMLKDCKDPSELRQWKNSSENAVSSANSMIEDI 603


>gb|EOY31372.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
            cacao] gi|508784118|gb|EOY31374.1| Pentatricopeptide
            repeat superfamily protein isoform 1 [Theobroma cacao]
            gi|508784120|gb|EOY31376.1| Pentatricopeptide repeat
            superfamily protein isoform 1 [Theobroma cacao]
          Length = 595

 Score =  591 bits (1523), Expect(2) = e-175
 Identities = 302/515 (58%), Positives = 377/515 (73%), Gaps = 6/515 (1%)
 Frame = -3

Query: 2724 YSTQSSAAIRGKP--KWPLSKSKPDXXXXXXXXXXXXXXXXXXPNFNSSEFTCLRDLLTN 2551
            +S QS  + +  P  KWP   S P                     F+ S F+ + +LL N
Sbjct: 25   FSDQSWLSKKRNPLIKWPPPSSSP----------CNQPHPIPNRTFSQSNFSIISNLLKN 74

Query: 2550 QNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFRWAEKQPGFEFSVAVFN 2371
              +  G  LE+AL+ T IDP   LL  IF   DSSPK L  LF WAEK+PGF+ S  +F+
Sbjct: 75   STITSGSSLESALDQTEIDPDPGLLQAIFECFDSSPKLLHHLFLWAEKKPGFKSSATLFD 134

Query: 2370 AMVNSLGKAREFDSAWSLILHHI----KASKSPNLDTFAIMIRRYARAGMPLPAIRTYEF 2203
            +MVN LGKAR F+ AWSL+L  I    + S   +++TF I+IRRYARAGMP PAIRT+EF
Sbjct: 135  SMVNVLGKARGFEDAWSLVLDRIGDGMEGSTLVSVNTFVILIRRYARAGMPQPAIRTFEF 194

Query: 2202 ASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVPSWIPSTRVYNILLNG 2023
            A  LE +   D +  LFEI+LDSLCKEG VR+ SEY  +++     W+PS +VYNILLNG
Sbjct: 195  AKSLEQICNSDEETNLFEIMLDSLCKEGHVRVVSEYLTRKRETDLGWVPSIKVYNILLNG 254

Query: 2022 WFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIAMELIAEMRKEGLEPN 1843
            WFRSRKLK AERLW++MK+E ++PSVVTYGTLVEGYC M RVE A++L+ EM+  G+EPN
Sbjct: 255  WFRSRKLKHAERLWLDMKKEGVLPSVVTYGTLVEGYCTMRRVERAIQLVDEMKGVGIEPN 314

Query: 1842 AIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKGFCKAGDLQGASKILK 1663
            A +YNP+IDALGE GR K+A  MMER  + ESGP +S Y+SL+KG+CKA DL GASKILK
Sbjct: 315  AKVYNPIIDALGEAGRLKEALGMMERVFLCESGPNISMYSSLVKGYCKARDLVGASKILK 374

Query: 1662 LMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPDRLTYHLLVKMLCEQG 1483
            +MI+RGF+P+ TTYNYFFR+FS+F KIEE +NLYTK+IESG+ PDRLTYHLL+KML E+ 
Sbjct: 375  MMISRGFIPTPTTYNYFFRYFSQFRKIEEAMNLYTKMIESGHTPDRLTYHLLLKMLFEEE 434

Query: 1482 RLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFEAMIRRGLVPQYLTYE 1303
            RL+L++QI KEMR RGYD DLAT+TMLIHLL K+H+F+ AFGEFE MIRRG+ PQYLT++
Sbjct: 435  RLDLAVQISKEMRARGYDRDLATSTMLIHLLCKMHRFEDAFGEFEDMIRRGMAPQYLTFQ 494

Query: 1302 KMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
            +M+ ELK +GMT MA KL  MM+SV  S  LPNTY
Sbjct: 495  RMNDELKKRGMTDMASKLCDMMSSVRSSKKLPNTY 529



 Score = 53.9 bits (128), Expect(2) = e-175
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISK 1034
            SS ARR S+M KAEA+SD+LKTC +PR+  K R   E+ VSSA   I+ I +
Sbjct: 535  SSRARRTSIMRKAEAMSDMLKTCKDPREFVKHRTLSENAVSSAGRLIEIIKE 586


>gb|EOY31373.1| Pentatricopeptide repeat superfamily protein isoform 2, partial
            [Theobroma cacao]
          Length = 584

 Score =  591 bits (1523), Expect(2) = e-175
 Identities = 302/515 (58%), Positives = 377/515 (73%), Gaps = 6/515 (1%)
 Frame = -3

Query: 2724 YSTQSSAAIRGKP--KWPLSKSKPDXXXXXXXXXXXXXXXXXXPNFNSSEFTCLRDLLTN 2551
            +S QS  + +  P  KWP   S P                     F+ S F+ + +LL N
Sbjct: 14   FSDQSWLSKKRNPLIKWPPPSSSP----------CNQPHPIPNRTFSQSNFSIISNLLKN 63

Query: 2550 QNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFRWAEKQPGFEFSVAVFN 2371
              +  G  LE+AL+ T IDP   LL  IF   DSSPK L  LF WAEK+PGF+ S  +F+
Sbjct: 64   STITSGSSLESALDQTEIDPDPGLLQAIFECFDSSPKLLHHLFLWAEKKPGFKSSATLFD 123

Query: 2370 AMVNSLGKAREFDSAWSLILHHI----KASKSPNLDTFAIMIRRYARAGMPLPAIRTYEF 2203
            +MVN LGKAR F+ AWSL+L  I    + S   +++TF I+IRRYARAGMP PAIRT+EF
Sbjct: 124  SMVNVLGKARGFEDAWSLVLDRIGDGMEGSTLVSVNTFVILIRRYARAGMPQPAIRTFEF 183

Query: 2202 ASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVPSWIPSTRVYNILLNG 2023
            A  LE +   D +  LFEI+LDSLCKEG VR+ SEY  +++     W+PS +VYNILLNG
Sbjct: 184  AKSLEQICNSDEETNLFEIMLDSLCKEGHVRVVSEYLTRKRETDLGWVPSIKVYNILLNG 243

Query: 2022 WFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIAMELIAEMRKEGLEPN 1843
            WFRSRKLK AERLW++MK+E ++PSVVTYGTLVEGYC M RVE A++L+ EM+  G+EPN
Sbjct: 244  WFRSRKLKHAERLWLDMKKEGVLPSVVTYGTLVEGYCTMRRVERAIQLVDEMKGVGIEPN 303

Query: 1842 AIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKGFCKAGDLQGASKILK 1663
            A +YNP+IDALGE GR K+A  MMER  + ESGP +S Y+SL+KG+CKA DL GASKILK
Sbjct: 304  AKVYNPIIDALGEAGRLKEALGMMERVFLCESGPNISMYSSLVKGYCKARDLVGASKILK 363

Query: 1662 LMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPDRLTYHLLVKMLCEQG 1483
            +MI+RGF+P+ TTYNYFFR+FS+F KIEE +NLYTK+IESG+ PDRLTYHLL+KML E+ 
Sbjct: 364  MMISRGFIPTPTTYNYFFRYFSQFRKIEEAMNLYTKMIESGHTPDRLTYHLLLKMLFEEE 423

Query: 1482 RLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFEAMIRRGLVPQYLTYE 1303
            RL+L++QI KEMR RGYD DLAT+TMLIHLL K+H+F+ AFGEFE MIRRG+ PQYLT++
Sbjct: 424  RLDLAVQISKEMRARGYDRDLATSTMLIHLLCKMHRFEDAFGEFEDMIRRGMAPQYLTFQ 483

Query: 1302 KMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
            +M+ ELK +GMT MA KL  MM+SV  S  LPNTY
Sbjct: 484  RMNDELKKRGMTDMASKLCDMMSSVRSSKKLPNTY 518



 Score = 53.9 bits (128), Expect(2) = e-175
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISK 1034
            SS ARR S+M KAEA+SD+LKTC +PR+  K R   E+ VSSA   I+ I +
Sbjct: 524  SSRARRTSIMRKAEAMSDMLKTCKDPREFVKHRTLSENAVSSAGRLIEIIKE 575


>gb|EOY31375.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            4, partial [Theobroma cacao] gi|508784121|gb|EOY31377.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 4, partial [Theobroma cacao]
          Length = 560

 Score =  590 bits (1521), Expect(2) = e-175
 Identities = 293/470 (62%), Positives = 365/470 (77%), Gaps = 4/470 (0%)
 Frame = -3

Query: 2595 FNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFRW 2416
            F+ S F+ + +LL N  +  G  LE+AL+ T IDP   LL  IF   DSSPK L  LF W
Sbjct: 25   FSQSNFSIISNLLKNSTITSGSSLESALDQTEIDPDPGLLQAIFECFDSSPKLLHHLFLW 84

Query: 2415 AEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHI----KASKSPNLDTFAIMIRRY 2248
            AEK+PGF+ S  +F++MVN LGKAR F+ AWSL+L  I    + S   +++TF I+IRRY
Sbjct: 85   AEKKPGFKSSATLFDSMVNVLGKARGFEDAWSLVLDRIGDGMEGSTLVSVNTFVILIRRY 144

Query: 2247 ARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVP 2068
            ARAGMP PAIRT+EFA  LE +   D +  LFEI+LDSLCKEG VR+ SEY  +++    
Sbjct: 145  ARAGMPQPAIRTFEFAKSLEQICNSDEETNLFEIMLDSLCKEGHVRVVSEYLTRKRETDL 204

Query: 2067 SWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIA 1888
             W+PS +VYNILLNGWFRSRKLK AERLW++MK+E ++PSVVTYGTLVEGYC M RVE A
Sbjct: 205  GWVPSIKVYNILLNGWFRSRKLKHAERLWLDMKKEGVLPSVVTYGTLVEGYCTMRRVERA 264

Query: 1887 MELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKG 1708
            ++L+ EM+  G+EPNA +YNP+IDALGE GR K+A  MMER  + ESGP +S Y+SL+KG
Sbjct: 265  IQLVDEMKGVGIEPNAKVYNPIIDALGEAGRLKEALGMMERVFLCESGPNISMYSSLVKG 324

Query: 1707 FCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPD 1528
            +CKA DL GASKILK+MI+RGF+P+ TTYNYFFR+FS+F KIEE +NLYTK+IESG+ PD
Sbjct: 325  YCKARDLVGASKILKMMISRGFIPTPTTYNYFFRYFSQFRKIEEAMNLYTKMIESGHTPD 384

Query: 1527 RLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFE 1348
            RLTYHLL+KML E+ RL+L++QI KEMR RGYD DLAT+TMLIHLL K+H+F+ AFGEFE
Sbjct: 385  RLTYHLLLKMLFEEERLDLAVQISKEMRARGYDRDLATSTMLIHLLCKMHRFEDAFGEFE 444

Query: 1347 AMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
             MIRRG+ PQYLT+++M+ ELK +GMT MA KL  MM+SV  S  LPNTY
Sbjct: 445  DMIRRGMAPQYLTFQRMNDELKKRGMTDMASKLCDMMSSVRSSKKLPNTY 494



 Score = 53.9 bits (128), Expect(2) = e-175
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISK 1034
            SS ARR S+M KAEA+SD+LKTC +PR+  K R   E+ VSSA   I+ I +
Sbjct: 500  SSRARRTSIMRKAEAMSDMLKTCKDPREFVKHRTLSENAVSSAGRLIEIIKE 551


>ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
            mitochondrial-like isoform X1 [Glycine max]
          Length = 622

 Score =  583 bits (1503), Expect(2) = e-172
 Identities = 294/473 (62%), Positives = 366/473 (77%), Gaps = 8/473 (1%)
 Frame = -3

Query: 2592 NSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFRWA 2413
            N +  + + +L  + +L PGP L   L+   I+P  ALLL +F+   SSPK L +LF WA
Sbjct: 89   NPNALSVISNLFADPSLSPGPALHAELDRAGIEPDPALLLAVFDRFGSSPKLLHSLFLWA 148

Query: 2412 EKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKAS--------KSPNLDTFAIMI 2257
            + +P F     +F+A+VN+L KAREFD+AW L+LHH +          +  ++ TFAIMI
Sbjct: 149  QTRPAFRPGPKLFDAVVNALAKAREFDAAWKLVLHHAEKDGEEEGEKERLVSVGTFAIMI 208

Query: 2256 RRYARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKG 2077
            RRYARAGM   AIRTYEFA+  + +    S+  L EIL+DSLCKEG VR ASEYF  +K 
Sbjct: 209  RRYARAGMSKLAIRTYEFATNNKSIVDSGSEMSLLEILMDSLCKEGSVREASEYFLWKKE 268

Query: 2076 EVPSWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRV 1897
               SW+PS RVYNI+LNGWFR RKLK+ ERLW EMK EN+ P+VVTYGTLVEGYCRM RV
Sbjct: 269  LDLSWVPSIRVYNIMLNGWFRLRKLKQGERLWAEMK-ENMRPTVVTYGTLVEGYCRMRRV 327

Query: 1896 EIAMELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSL 1717
            E A+E++ +M KEG+ PNAI+YNP+IDAL E GRFK+A  M+ERF VLE GPT STYNSL
Sbjct: 328  EKALEMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDSTYNSL 387

Query: 1716 IKGFCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGY 1537
            +KGFCKAGDL GASKILK+MI+RGFLPS TTYNYFFR+FS+  KIEEG+NLYTKLI+SGY
Sbjct: 388  VKGFCKAGDLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGY 447

Query: 1536 EPDRLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFG 1357
             PDRLTYHLLVKMLCE+ +L+L++Q+ KEMR  GYD+DLAT+TML+HLL K+ + ++AF 
Sbjct: 448  TPDRLTYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFV 507

Query: 1356 EFEAMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
            EFE MIRRG+VPQYLT+++M  +LK QGMT+MAQKL  +M+SVP+S NLPNTY
Sbjct: 508  EFEDMIRRGIVPQYLTFQRMKADLKKQGMTEMAQKLCKLMSSVPYSPNLPNTY 560



 Score = 50.8 bits (120), Expect(2) = e-172
 Identities = 24/55 (43%), Positives = 39/55 (70%)
 Frame = -2

Query: 1186 SHARRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKRVNS 1022
            ++ARR S++ KA+A SD+LK C +P +L K R+  E+ VSS N+ I+ I ++ N+
Sbjct: 567  AYARRKSIIRKAKAFSDMLKDCKDPSELRKHRSSSENTVSSTNSLIEDIERKRNT 621


>ref|XP_006476197.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At5g11310, mitochondrial-like [Citrus sinensis]
          Length = 551

 Score =  582 bits (1500), Expect(2) = e-167
 Identities = 282/466 (60%), Positives = 363/466 (77%), Gaps = 3/466 (0%)
 Frame = -3

Query: 2598 NFNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFR 2419
            NF+ ++F+ +  LL N  +  GP LE+ LN T ++P  ALLL +F H D SPK L TLFR
Sbjct: 45   NFSQTDFSVISGLLRNPAISSGPSLESELNQTGVEPEPALLLAVFEHFDHSPKLLHTLFR 104

Query: 2418 WAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRY 2248
            WAE +P F+ S A+FN M+  L KA+EFDSAW L+L  I   + P+    DTF I+IRRY
Sbjct: 105  WAESKPEFKCSAALFNCMIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRY 164

Query: 2247 ARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVP 2068
            ARAGM   AI T+EFA+ L+++   DS   LFEILLDSLCK+G V+ ASEYF KRK    
Sbjct: 165  ARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ 224

Query: 2067 SWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIA 1888
            SW P+ RVYNILLNGWFRS+ +K AER W+EM++EN+ P+VVTYGTLVEGYCR+ RV+ A
Sbjct: 225  SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 284

Query: 1887 MELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKG 1708
            + L+ EMRKEG+EPNAI+YN VID L E GRF++ S MMERF+V E GPT+ TY SL+KG
Sbjct: 285  IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 344

Query: 1707 FCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPD 1528
            +CKAGDL+GASKILK+MI+R FLPS TTYNYFFR+FSKFGK+++ +NLY K+IESGY PD
Sbjct: 345  YCKAGDLEGASKILKMMISRDFLPSPTTYNYFFRYFSKFGKVDDAMNLYRKMIESGYTPD 404

Query: 1527 RLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFE 1348
            RLTYH+L+KMLC++ +L+L++Q+ KEM+ RG D+DL T+TMLIHLL ++++FD+A  EFE
Sbjct: 405  RLTYHILLKMLCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 464

Query: 1347 AMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNL 1210
             MIRRGLVP YLT+++++ E K +GMT +AQKL  +M+SVP S  L
Sbjct: 465  DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 510



 Score = 36.2 bits (82), Expect(2) = e-167
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = -2

Query: 1189 SSHARRISVMHKAEAISDILKTCSNPRKLAK 1097
            +S ARR   M KAE +S ILK C +PR+L K
Sbjct: 520  ASDARRRPTMQKAETMSHILKACKDPRELVK 550


>ref|XP_006450554.1| hypothetical protein CICLE_v10008018mg [Citrus clementina]
            gi|557553780|gb|ESR63794.1| hypothetical protein
            CICLE_v10008018mg [Citrus clementina]
          Length = 517

 Score =  588 bits (1517), Expect = e-165
 Identities = 284/466 (60%), Positives = 366/466 (78%), Gaps = 3/466 (0%)
 Frame = -3

Query: 2598 NFNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFR 2419
            NF+ ++F+ +  LL N  +  GP LE+ LN T ++P  ALLL +F H D SPK L TLFR
Sbjct: 45   NFSQTDFSVISGLLRNTAISSGPSLESELNQTGVEPEPALLLAVFEHFDHSPKLLHTLFR 104

Query: 2418 WAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRY 2248
            WAE +P F+ S A+FN ++  L KA+EFDSAW L+L  I   ++P+    DTF I+IRRY
Sbjct: 105  WAESKPEFKCSAALFNCVIKVLAKAKEFDSAWCLLLDKIGGHEAPDFVSKDTFVILIRRY 164

Query: 2247 ARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVP 2068
            ARAGM   AIRT+EFA+ L+++   DS   LFEILLDSLCK+G V+ ASEYF KRK    
Sbjct: 165  ARAGMVEAAIRTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ 224

Query: 2067 SWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIA 1888
            SW P+ RVYNILLNGWFRS+ +K AER W+EM++EN+ P+VVTYGTLVEGYCR+ RV+ A
Sbjct: 225  SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 284

Query: 1887 MELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKG 1708
            + L+ EMRKEG+EPNAI+YN VID L E GRF++ S MMERF+V E GPT+ TY SL+KG
Sbjct: 285  IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 344

Query: 1707 FCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPD 1528
            +CKAGDL+GASKILK+MI+RGFLPS TTYNYFFR+FSKFGK+E+ +NLY K+IESGY PD
Sbjct: 345  YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 404

Query: 1527 RLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFE 1348
            RLTYH+L+KMLC++ +L+L++Q+ KEM+ RG D+DL T+TMLIHLL ++++FD+A  EFE
Sbjct: 405  RLTYHILLKMLCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 464

Query: 1347 AMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNL 1210
             MIRRGLVP YLT+++++ E K +GMT +AQKL  +M+SVP S  L
Sbjct: 465  DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 510


>ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355477735|gb|AES58938.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 587

 Score =  585 bits (1508), Expect = e-164
 Identities = 286/471 (60%), Positives = 367/471 (77%), Gaps = 5/471 (1%)
 Frame = -3

Query: 2595 FNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFRW 2416
            F+ ++FT +  L TN ++ PG  L   L  T I PT  LL  +F+H  SSPK L +L+ W
Sbjct: 68   FSPNDFTLISTLFTNPSISPGSSLLTNLTQTGIKPTPPLLHAVFDHFASSPKLLHSLYLW 127

Query: 2415 AEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKAS-----KSPNLDTFAIMIRR 2251
            A  QPGF+   ++F++++N+L K +EFD AWSL+L  I+       K  ++ TFAI+IRR
Sbjct: 128  ALNQPGFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIRRDDDDDEKLVSVGTFAIIIRR 187

Query: 2250 YARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEV 2071
            YARAGM   AIRT+EFA   + +    S+  LFEIL+DSLCKEG  R ASEY  +RK   
Sbjct: 188  YARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSLCKEGSAREASEYLLRRKETD 247

Query: 2070 PSWIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEI 1891
              W+PS RVYNI+LNGWFR+RKLK AERLW EMK EN+ PSVVTYGTLVEGYCRM RVE 
Sbjct: 248  LGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEK 307

Query: 1890 AMELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIK 1711
            A+E++ EM KEG++PNAI+YNP+IDAL E GRFK+A  MMERF VL+ GPT+STYNSL+K
Sbjct: 308  ALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVK 367

Query: 1710 GFCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEP 1531
            GFCKAGD++GASKILK MI+RGFLP  TTYNYFFR+FS+ GK++EG+NLYTK+IESG+ P
Sbjct: 368  GFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNP 427

Query: 1530 DRLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEF 1351
            DRLTYHL++KMLCE+ +L L++Q+  EMR +GYD+DLAT+TML HLL K+H+ ++AF EF
Sbjct: 428  DRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEF 487

Query: 1350 EAMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
            E MIRRG++PQYLT++K++ ELK QGM +MA+KL  +M+SVP+S+ LPNTY
Sbjct: 488  EDMIRRGIIPQYLTFQKLNVELKKQGMNEMARKLCHLMSSVPYSDKLPNTY 538


>ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297317306|gb|EFH47728.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 602

 Score =  542 bits (1396), Expect(2) = e-158
 Identities = 261/471 (55%), Positives = 359/471 (76%), Gaps = 4/471 (0%)
 Frame = -3

Query: 2598 NFNSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFR 2419
            +F+ ++ + + +LL N N+ PG  LE+AL+ T I+P+  L+  +F+ L SSP  L ++F+
Sbjct: 64   DFSKTDLSTISNLLENTNVVPGSSLESALDETGIEPSLQLVQALFDRLSSSPMLLHSVFK 123

Query: 2418 WAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRY 2248
            WAE +PGF  S ++F++++NSL KAREF+ AWSL+   +++ +  NL   DTF ++IRRY
Sbjct: 124  WAEMKPGFTLSPSLFDSVINSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRY 183

Query: 2247 ARAGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVP 2068
            ARAGM   AIR +EFA   E +    S+ KL E+LLD+LCKEG VR AS Y E+R+G + 
Sbjct: 184  ARAGMVQQAIRAFEFARSYEPVCKSASELKLLEVLLDALCKEGYVREASVYLERRRGMMD 243

Query: 2067 S-WIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEI 1891
            S W+PS R++NILLNGWFRSRKLK+AE+LW EMK  N+ P+VVTYGTL+EGYCRM RVEI
Sbjct: 244  SNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVEI 303

Query: 1890 AMELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIK 1711
            AME++ EM+   +E   +++NP+ID LGE GR  +A  MMERF V ESGPT+ TYNSL+K
Sbjct: 304  AMEILEEMKMAEMELTFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVK 363

Query: 1710 GFCKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEP 1531
             FCKAGDL GASKILK+M+ RG  P+ +TYN+FF++FSK  K EEG+NLY KLIE+G+ P
Sbjct: 364  NFCKAGDLPGASKILKMMMTRGVEPTTSTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP 423

Query: 1530 DRLTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEF 1351
            DRLTYHL++KMLCE G+L+L++Q+ KEM+ RG D DL T TML+HLL +L   ++AF EF
Sbjct: 424  DRLTYHLILKMLCEDGKLSLAIQVNKEMKNRGIDPDLLTTTMLMHLLCRLDMLEEAFEEF 483

Query: 1350 EAMIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
            +  +RRG++PQY+T++ +   L+++GMT MA++LS +M+S+PHS  LPNTY
Sbjct: 484  DNAVRRGIIPQYITFKMIDNGLRSKGMTDMAKRLSSLMSSLPHSKKLPNTY 534



 Score = 48.1 bits (113), Expect(2) = e-158
 Identities = 22/49 (44%), Positives = 33/49 (67%)
 Frame = -2

Query: 1177 RRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKR 1031
            RR S++H+AEA+SD+LK C NPRKL K+R   +  V    +  D +++R
Sbjct: 546  RRKSILHRAEAMSDVLKGCRNPRKLVKMRGSHKKGVREDESLTDDLNER 594


>ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g11310, mitochondrial; Flags: Precursor
            gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis
            thaliana] gi|110738090|dbj|BAF00978.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332004275|gb|AED91658.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  534 bits (1375), Expect(2) = e-157
 Identities = 259/469 (55%), Positives = 356/469 (75%), Gaps = 4/469 (0%)
 Frame = -3

Query: 2592 NSSEFTCLRDLLTNQNLKPGPELENALNLTRIDPTEALLLEIFNHLDSSPKPLFTLFRWA 2413
            + ++ + + +LL N ++ PG  LE+AL+ T I+P+  L+  +F+ L SSP  L ++F+WA
Sbjct: 66   SKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWA 125

Query: 2412 EKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRYAR 2242
            E +PGF  S ++F+++VNSL KAREF+ AWSL+   +++ +  NL   DTF ++IRRYAR
Sbjct: 126  EMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYAR 185

Query: 2241 AGMPLPAIRTYEFASKLEILHALDSDWKLFEILLDSLCKEGLVRIASEYFEKRKGEVPS- 2065
            AGM   AIR +EFA   E +    ++ +L E+LLD+LCKEG VR AS Y E+  G + S 
Sbjct: 186  AGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSN 245

Query: 2064 WIPSTRVYNILLNGWFRSRKLKKAERLWMEMKRENIIPSVVTYGTLVEGYCRMGRVEIAM 1885
            W+PS R++NILLNGWFRSRKLK+AE+LW EMK  N+ P+VVTYGTL+EGYCRM RV+IAM
Sbjct: 246  WVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAM 305

Query: 1884 ELIAEMRKEGLEPNAIIYNPVIDALGEDGRFKDASDMMERFMVLESGPTVSTYNSLIKGF 1705
            E++ EM+   +E N +++NP+ID LGE GR  +A  MMERF V ESGPT+ TYNSL+K F
Sbjct: 306  EVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNF 365

Query: 1704 CKAGDLQGASKILKLMINRGFLPSMTTYNYFFRHFSKFGKIEEGLNLYTKLIESGYEPDR 1525
            CKAGDL GASKILK+M+ RG  P+ TTYN+FF++FSK  K EEG+NLY KLIE+G+ PDR
Sbjct: 366  CKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425

Query: 1524 LTYHLLVKMLCEQGRLNLSMQIIKEMRIRGYDLDLATATMLIHLLLKLHQFDKAFGEFEA 1345
            LTYHL++KMLCE G+L+L+MQ+ KEM+ RG D DL T TMLIHLL +L   ++AF EF+ 
Sbjct: 426  LTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDN 485

Query: 1344 MIRRGLVPQYLTYEKMSKELKNQGMTKMAQKLSVMMASVPHSNNLPNTY 1198
             +RRG++PQY+T++ +   L+++GM+ MA++LS +M+S+PHS  LPNTY
Sbjct: 486  AVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTY 534



 Score = 50.8 bits (120), Expect(2) = e-157
 Identities = 24/49 (48%), Positives = 33/49 (67%)
 Frame = -2

Query: 1177 RRISVMHKAEAISDILKTCSNPRKLAKLRNPLEDVVSSANTWIDGISKR 1031
            RR S++H+AEA+SD+LK C NPRKL K+R   +  V      ID I++R
Sbjct: 546  RRKSILHRAEAMSDVLKGCRNPRKLVKMRGSHKKAVGEDINLIDDINER 594