BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00015410
         (1455 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus pe...   505   e-140
gb|EXB56542.1| DNA excision repair protein ERCC-1 [Morus notabilis]   500   e-139
gb|EOY11409.1| DNA excision repair protein ERCC-1 isoform 1 [The...   496   e-137
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   491   e-136
ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-...   490   e-136
ref|XP_006345166.1| PREDICTED: DNA excision repair protein ERCC-...   487   e-135
ref|XP_004235989.1| PREDICTED: DNA excision repair protein ERCC-...   483   e-134
ref|XP_006589150.1| PREDICTED: DNA excision repair protein ERCC-...   481   e-133
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|5...   478   e-132
ref|XP_006471950.1| PREDICTED: DNA excision repair protein ERCC-...   475   e-131
ref|XP_006433263.1| hypothetical protein CICLE_v10001229mg [Citr...   475   e-131
gb|ESW16745.1| hypothetical protein PHAVU_007G181700g [Phaseolus...   474   e-131
ref|XP_004495745.1| PREDICTED: DNA excision repair protein ERCC-...   473   e-131
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   473   e-131
gb|EOY11410.1| DNA excision repair protein ERCC-1 isoform 2 [The...   465   e-128
ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago...   464   e-128
ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis...   464   e-128
ref|XP_006408101.1| hypothetical protein EUTSA_v10020823mg [Eutr...   462   e-127
ref|XP_002882403.1| hypothetical protein ARALYDRAFT_477808 [Arab...   462   e-127
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-...   453   e-125

>gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus persica]
          Length = 398

 Score =  505 bits (1301), Expect = e-140
 Identities = 264/382 (69%), Positives = 301/382 (78%), Gaps = 10/382 (2%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA 1215
            K +IKIPS++EV+ES+QSKS P+SLF PS SF+QAF+FVK+S+FY              A
Sbjct: 20   KTVIKIPSFQEVLESAQSKSTPLSLFTPSQSFSQAFAFVKSSEFYSSPPPPATSSQPLQA 79

Query: 1214 QFHVPPRQTDQSEEGPCTASTSAVTS-------RNVILVSHRQKGNPLLKHIRNVRWSFA 1056
                   +T QS+    +A T+AV S       RN I+VSHRQKGNPLLKHIRNVRW FA
Sbjct: 80   SDTGNSSKTGQSDVPSSSAPTNAVASSSSPAQRRNAIIVSHRQKGNPLLKHIRNVRWEFA 139

Query: 1055 DIVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLE 876
            DIVCDYLLGQ++CALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCH+DVEDV KPLLE
Sbjct: 140  DIVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHIDVEDVVKPLLE 199

Query: 875  VTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRH 696
            VTKTALLH+CTLLCGWSLEECGRYLET KVYENKPAD+IQGQMD+DYLSRLNHALT VRH
Sbjct: 200  VTKTALLHECTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLNHALTTVRH 259

Query: 695  VNKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPSNP 516
            VNKTDVVTLG+TFGSL++IMD SMEDLARCPGIGERKVKRLYD FHEPFKRVV  +P+ P
Sbjct: 260  VNKTDVVTLGTTFGSLSHIMDVSMEDLARCPGIGERKVKRLYDTFHEPFKRVVASRPAVP 319

Query: 515  EIEVPIN--PDGAATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGRKTGK 345
            E   P N  P     E KEA+ E  D +KRRKKEPE ++KSALS AF+KY+D++ +K  K
Sbjct: 320  ETSAPSNAEPGSVDEEDKEAE-ETEDESKRRKKEPELTVKSALSVAFSKYADKVNKKNSK 378

Query: 344  PLTNEGKLESSATAAEANVEDK 279
                E K E+SA A EA  E +
Sbjct: 379  -TQREEKGETSA-AMEAETEKR 398


>gb|EXB56542.1| DNA excision repair protein ERCC-1 [Morus notabilis]
          Length = 407

 Score =  500 bits (1287), Expect = e-139
 Identities = 261/387 (67%), Positives = 305/387 (78%), Gaps = 13/387 (3%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA 1215
            K +IKIPSY+EV+++SQ KS P SLF PS +F+QAF+FVK+S+FY               
Sbjct: 23   KVVIKIPSYQEVLKTSQWKSTPPSLFAPSQTFSQAFAFVKSSEFYSPPPPSSTSAAASEI 82

Query: 1214 ------QFHVPPRQTDQSEEG---PCTASTSAVTSRNVILVSHRQKGNPLLKHIRNVRWS 1062
                  Q +VP   +  S  G     ++S+S+  +RN ILVSHRQKGNPLLKHIRNVRW+
Sbjct: 83   TASRERQSNVPSSSSSASTSGLSSSWSSSSSSTQNRNAILVSHRQKGNPLLKHIRNVRWA 142

Query: 1061 FADIVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPL 882
            FAD+VCDYLLGQ +CALYLSLRYHLLHPDYLYYRIRELQKNFKL VVLCHVDVEDV KPL
Sbjct: 143  FADVVCDYLLGQGSCALYLSLRYHLLHPDYLYYRIRELQKNFKLSVVLCHVDVEDVVKPL 202

Query: 881  LEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAV 702
            LEVTKTALLHDCTLLCGWSLEECGRYLET KVYENKPAD+IQGQMD+DYLSRL HALT V
Sbjct: 203  LEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLTHALTTV 262

Query: 701  RHVNKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPS 522
            RHVNKTDVVTLG+ FGSL++IMDASMEDLARCPGIGERKVKRLYD+FHEPFKRVVP  P+
Sbjct: 263  RHVNKTDVVTLGNAFGSLSHIMDASMEDLARCPGIGERKVKRLYDSFHEPFKRVVPSYPA 322

Query: 521  NPEIEVPINPD-GAATEGKEA--DKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGRK 354
             PE     N + G+A E KEA  +K+    +KRRKKEP+ ++KSALSAAF+KY+D++ +K
Sbjct: 323  VPETSTQNNAEVGSANEDKEAKEEKDREKESKRRKKEPQLTVKSALSAAFSKYADKVRKK 382

Query: 353  TGKPLTNEGKLESSATAAEANVEDKNI 273
              K    EG+ E+SA A E   E+KN+
Sbjct: 383  NNKS-QGEGRGETSA-ATEQEAENKNL 407


>gb|EOY11409.1| DNA excision repair protein ERCC-1 isoform 1 [Theobroma cacao]
          Length = 409

 Score =  496 bits (1277), Expect = e-137
 Identities = 263/391 (67%), Positives = 302/391 (77%), Gaps = 16/391 (4%)
 Frame = -2

Query: 1388 LIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA-- 1215
            +I IPSY+EVIESSQ KS P SLF PS SF+QAF+F+K+S+FY              +  
Sbjct: 20   VIGIPSYKEVIESSQIKSTPPSLFTPSQSFSQAFNFIKSSEFYSPPPAPPAPSSAAISTP 79

Query: 1214 ----QFHVPPRQTD----QSEEGPCTASTSAVTS--RNVILVSHRQKGNPLLKHIRNVRW 1065
                + +VP          +   P  AS+S+ +S  RN ILVSHRQKGNPLLKHIRNVRW
Sbjct: 80   RPVGEANVPSSSAAAAAASASASPVAASSSSNSSQSRNAILVSHRQKGNPLLKHIRNVRW 139

Query: 1064 SFADIVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKP 885
            +FADIVCDYLLGQN+CALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDV KP
Sbjct: 140  AFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKP 199

Query: 884  LLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTA 705
            LLEVTKTALLHDCTLLCGWSLEECGRYLET KVYENKPADLIQGQMD+DYLSRLNHALT 
Sbjct: 200  LLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLNHALTT 259

Query: 704  VRHVNKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQP 525
            +RHVNKTDVVTLGSTFG+LA+IMDASMEDLARCPGIGERKVKRLYD FHEPFKRV+   P
Sbjct: 260  IRHVNKTDVVTLGSTFGTLASIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVISSNP 319

Query: 524  SNPEIEVPINPDG---AATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGR 357
              P  E PI  +    +A+E  EA+K+  D +KRRKKEPE ++KSAL+AAFA+Y+ +I +
Sbjct: 320  PVP--ETPILKEAEPCSASEATEAEKDTEDTSKRRKKEPEMNVKSALTAAFARYAGKISK 377

Query: 356  KTGKPLTNEGKLESSATAAEANVEDKNISKD 264
            K+ K   ++GK     +AA   V     SK+
Sbjct: 378  KSTK---SKGKERGGTSAAAEPVAATKNSKE 405


>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
            gi|296088298|emb|CBI36743.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  491 bits (1265), Expect = e-136
 Identities = 259/372 (69%), Positives = 289/372 (77%), Gaps = 2/372 (0%)
 Frame = -2

Query: 1388 LIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSAQF 1209
            +IKIPSY+EV+ESSQSK+   SLF PS SF+QAFSFVK+S  Y              +  
Sbjct: 23   VIKIPSYQEVLESSQSKTTS-SLFTPSPSFSQAFSFVKSSQSYTPPPPATPPPPPPPSSR 81

Query: 1208 HVPPRQTDQSEEGPCTASTSAVTSRNVILVSHRQKGNPLLKHIRNVRWSFADIVCDYLLG 1029
             V   +   S     + S SA  SRN ILVSHRQKGNPLLKHIRNVRW FADIVCDYLLG
Sbjct: 82   QVEQLEAPSSSSSSPSLSRSA-QSRNAILVSHRQKGNPLLKHIRNVRWDFADIVCDYLLG 140

Query: 1028 QNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLEVTKTALLHD 849
            QN+CALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDV KPLLEVT+TALLHD
Sbjct: 141  QNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVIKPLLEVTRTALLHD 200

Query: 848  CTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRHVNKTDVVTL 669
            CTLLC WSLEECGRYLET KVYENK AD+IQGQ D+DYLSRL HALT VRHVNKTDVVTL
Sbjct: 201  CTLLCAWSLEECGRYLETIKVYENKSADIIQGQTDTDYLSRLTHALTTVRHVNKTDVVTL 260

Query: 668  GSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPSNPEIEVPINPD 489
            GSTFGSL++IMDASMEDLARCPGIGERKVKRLYD FHEPFKRVVP  P+ PE  V  N +
Sbjct: 261  GSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVPSCPAVPENPVHNNAE 320

Query: 488  -GAATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGRKTGKPLTNEGKLES 315
              +  E  E + +V DA+KRRKKEPE ++KSALSAAFA+YS++IG++  +P     K E 
Sbjct: 321  PSSVNEVVEVENDVEDASKRRKKEPELTVKSALSAAFAQYSEKIGKRNNRP--QGKKHEE 378

Query: 314  SATAAEANVEDK 279
               A E   E+K
Sbjct: 379  KGHAPETKAENK 390


>ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-1-like [Fragaria vesca
            subsp. vesca]
          Length = 380

 Score =  490 bits (1261), Expect = e-136
 Identities = 252/371 (67%), Positives = 291/371 (78%), Gaps = 1/371 (0%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA 1215
            K +IKIPS++EVIESSQSKS P SLF PS +F+QAF+FVK+S+FY             + 
Sbjct: 18   KTVIKIPSFQEVIESSQSKSTPPSLFAPSKTFSQAFAFVKSSEFYSPPKPAETSNSRETG 77

Query: 1214 QFHVPPRQTDQSEEGPCTASTSAVTSRNVILVSHRQKGNPLLKHIRNVRWSFADIVCDYL 1035
            QF VP      S      AS+S+   RN ILVS+RQKGNPLLKHIRNVRW FADIVCDYL
Sbjct: 78   QFDVP----SSSAPTNAVASSSSAQRRNAILVSNRQKGNPLLKHIRNVRWEFADIVCDYL 133

Query: 1034 LGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLEVTKTALL 855
            LGQ++CALYLSLRYHLLHPDYLYYRIRELQKN+KLRVVLCHVDVEDV KPLLEVTKTA+L
Sbjct: 134  LGQSSCALYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHVDVEDVVKPLLEVTKTAML 193

Query: 854  HDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRHVNKTDVV 675
            H+CTLLC WSLEECGRYLET KVYENKPAD+IQGQMD+DYLSRLNHALT VRHVNKTDVV
Sbjct: 194  HECTLLCAWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLNHALTTVRHVNKTDVV 253

Query: 674  TLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPSNPEIEVPIN 495
            TLG+TFGSL+++MDASMEDLARCPGIGERKVK LYD FHEPFKRVV  +P+  E   P N
Sbjct: 254  TLGTTFGSLSHVMDASMEDLARCPGIGERKVKCLYDTFHEPFKRVVASRPAVSESSPPDN 313

Query: 494  PDGAATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGRKTGKPLTNEGKLE 318
             +  +    +  K+  + +K RKKEPE ++KSALSAAFAKY+DR+ +K+  P    G   
Sbjct: 314  AEPCSVTEDKETKDTKEESKCRKKEPEPTVKSALSAAFAKYADRVKKKS--PQLKNG--- 368

Query: 317  SSATAAEANVE 285
             ++ A EA  E
Sbjct: 369  DTSVAMEAEAE 379


>ref|XP_006345166.1| PREDICTED: DNA excision repair protein ERCC-1-like [Solanum
            tuberosum]
          Length = 392

 Score =  487 bits (1253), Expect = e-135
 Identities = 257/381 (67%), Positives = 296/381 (77%), Gaps = 5/381 (1%)
 Frame = -2

Query: 1391 FLIKIPSYEEVIESS-QSK--SAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXX 1221
            F+I+IPSYEEV+ESS QSK  S+  SLF P+ SF+QAF FVKNS+FY             
Sbjct: 15   FVIQIPSYEEVMESSSQSKTTSSSSSLFNPTPSFSQAFKFVKNSEFYSPPPPPNTQPSSS 74

Query: 1220 SAQFHVPPRQTDQSEEGPCTAST-SAVTSRNVILVSHRQKGNPLLKHIRNVRWSFADIVC 1044
            S      PR  + S+    ++ST S+  +RN ILVS+RQKGNPLLKHIRNVRW+FADIVC
Sbjct: 75   SQS--ATPRPVNSSDVNTSSSSTPSSSANRNAILVSNRQKGNPLLKHIRNVRWTFADIVC 132

Query: 1043 DYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLEVTKT 864
            DYLLG NTCALYLSLRYHLLHPDYLY+RIRELQKNF+LR++LCHVDVEDV KPLLEVT+T
Sbjct: 133  DYLLGPNTCALYLSLRYHLLHPDYLYFRIRELQKNFRLRIILCHVDVEDVIKPLLEVTRT 192

Query: 863  ALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRHVNKT 684
            +LLHDCTLLCGWSLEECGRYLET KVYENKPADLIQGQMD DYLSRLNHALT++RHVNKT
Sbjct: 193  SLLHDCTLLCGWSLEECGRYLETVKVYENKPADLIQGQMDGDYLSRLNHALTSIRHVNKT 252

Query: 683  DVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPSNPEIEV 504
            DVVTLGSTFGSL+++MDASMEDLARCPGIGERKVKRLYDAFHEPFKR VP +   PE  V
Sbjct: 253  DVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRLYDAFHEPFKREVPKRQCIPETSV 312

Query: 503  PINPDGAATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGRKTGKPLTNEG 327
                   ++  KE +KE+ D +   KKEPE ++KSALSAAFAKYS +I RK  K  + E 
Sbjct: 313  ANESHPGSSNTKEDEKEIVDTSNSEKKEPEVTVKSALSAAFAKYSHKITRKKNK--SQEE 370

Query: 326  KLESSATAAEANVEDKNISKD 264
            +    +T  EA   D N S +
Sbjct: 371  EEGKCSTNEEAKTGDTNGSNN 391


>ref|XP_004235989.1| PREDICTED: DNA excision repair protein ERCC-1-like [Solanum
            lycopersicum]
          Length = 390

 Score =  483 bits (1243), Expect = e-134
 Identities = 254/382 (66%), Positives = 290/382 (75%), Gaps = 10/382 (2%)
 Frame = -2

Query: 1391 FLIKIPSYEEVIE-SSQSKSAPVS--LFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXX 1221
            F+I+IPSYEEV+E SSQ K+A  S  LF P+ SF+QAF FVKNS+FY             
Sbjct: 15   FVIQIPSYEEVMECSSQPKTASSSSSLFNPTPSFSQAFKFVKNSEFYSPPPPS------- 67

Query: 1220 SAQFHVPPRQTDQSE----EGPCTASTSAVTSRNVILVSHRQKGNPLLKHIRNVRWSFAD 1053
             +     PRQ + S         T + S+  +RN ILVS+RQKGNPLLKHIRNVRW+FAD
Sbjct: 68   -SSQSATPRQVNSSHVTASSSSSTPTPSSSANRNAILVSNRQKGNPLLKHIRNVRWTFAD 126

Query: 1052 IVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLEV 873
            IVCDYLLG NTCALYLSLRYHLLHPDYLY+RIRELQKNF+LR++LCHVDVEDV KPLLEV
Sbjct: 127  IVCDYLLGPNTCALYLSLRYHLLHPDYLYFRIRELQKNFRLRIILCHVDVEDVMKPLLEV 186

Query: 872  TKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRHV 693
            T+T+LLHDCTLLCGWSLEECGRYLET KVYENKPADLIQGQMD DYLSRLNHALTA+RHV
Sbjct: 187  TRTSLLHDCTLLCGWSLEECGRYLETVKVYENKPADLIQGQMDGDYLSRLNHALTAIRHV 246

Query: 692  NKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPSNPE 513
            NKTDVVTLGSTFGSL+++MDASMEDLARCPGIGERKVKRLYDAFHEPFKR VP +   PE
Sbjct: 247  NKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRLYDAFHEPFKREVPKRQCIPE 306

Query: 512  IEVPINPDGAATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGRKTGKPL- 339
              V       ++  KE +KE+ D +   KKEPE ++KSALSAAFAKYS +I RK      
Sbjct: 307  TSVANESHPGSSNTKEDEKEIVDTSNSAKKEPEVTVKSALSAAFAKYSHKITRKKNNKSR 366

Query: 338  -TNEGKLESSATAAEANVEDKN 276
               EGK  ++  A   +V   N
Sbjct: 367  EEEEGKCSTNEEAKTGDVNGSN 388


>ref|XP_006589150.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 393

 Score =  481 bits (1237), Expect = e-133
 Identities = 255/394 (64%), Positives = 298/394 (75%), Gaps = 26/394 (6%)
 Frame = -2

Query: 1388 LIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSAQF 1209
            +I+IPSY+EV+ESSQ+KS P SLF PS +F++AF+FVK+SDFY                 
Sbjct: 20   VIRIPSYQEVVESSQAKSTPSSLFVPSQTFSEAFAFVKSSDFYSP--------------- 64

Query: 1208 HVPP--RQTDQSEEGPCTASTSAVTS-----------RNVILVSHRQKGNPLLKHIRNVR 1068
              PP  R+T QS+    T++ S  T+           RN ILVSHRQKGNPLLKHIRNVR
Sbjct: 65   --PPKSRETGQSDAPSSTSTPSPATAAASSTIPSSQNRNSILVSHRQKGNPLLKHIRNVR 122

Query: 1067 WSFADIVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTK 888
            W+FAD+VCDY+LGQ++CALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDV K
Sbjct: 123  WAFADVVCDYMLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVIK 182

Query: 887  PLLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALT 708
            PLLEVTKTA+LHDCTLLCGWSLEECGRYLET KVYENKPAD+IQGQMD+DYLSRL H+LT
Sbjct: 183  PLLEVTKTAMLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLTHSLT 242

Query: 707  AVRHVNKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQ 528
             VRHVNKTDVVTLG+TFGSL+NIM ASMEDLARCPGIGERKVKRL+D FHEPFKRV   +
Sbjct: 243  TVRHVNKTDVVTLGTTFGSLSNIMGASMEDLARCPGIGERKVKRLFDTFHEPFKRVESSR 302

Query: 527  PSNPEIEV---PINPD---------GAATEGKEADKEVGDANKRRKKEPE-SIKSALSAA 387
             + PE  V   P +P+          +  E K+ D E  D +KRRKKEPE ++KSALSAA
Sbjct: 303  QAIPETSVQNKPASPESSIRNKAESSSLIEDKQEDTE--DVSKRRKKEPEVTVKSALSAA 360

Query: 386  FAKYSDRIGRKTGKPLTNEGKLESSATAAEANVE 285
            FAKYS R+G++  K  +   + E S  + E+  E
Sbjct: 361  FAKYSGRVGKR--KSTSQVEEKEESIISKESEAE 392


>ref|XP_002328427.1| predicted protein [Populus trichocarpa]
            gi|566169303|ref|XP_006382624.1| hypothetical protein
            POPTR_0005s03890g [Populus trichocarpa]
            gi|550337988|gb|ERP60421.1| hypothetical protein
            POPTR_0005s03890g [Populus trichocarpa]
          Length = 382

 Score =  478 bits (1230), Expect = e-132
 Identities = 255/384 (66%), Positives = 288/384 (75%), Gaps = 9/384 (2%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPV---SLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXX 1224
            K LI+IPSY+EVIESSQ K       SLF+PS +F+QAFSF+KNS+FY            
Sbjct: 20   KVLIQIPSYQEVIESSQVKPTQTQESSLFKPSQTFSQAFSFIKNSEFYSP---------- 69

Query: 1223 XSAQFHVPPRQTDQSEEGPCTASTSAVT--SRNVILVSHRQKGNPLLKHIRNVRWSFADI 1050
                   PP    +SE GP  AS+S     SRN ILVSHRQKGNPLLKHIRNV+W+FAD+
Sbjct: 70   -------PPPPPSKSEHGPSMASSSVQNNQSRNAILVSHRQKGNPLLKHIRNVKWAFADV 122

Query: 1049 VCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLEVT 870
            VCDYLLGQ++CALYLSLRYHLLHPDYLYYRIRELQKN KLRVVLCHVDVEDV KPLLEVT
Sbjct: 123  VCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNCKLRVVLCHVDVEDVVKPLLEVT 182

Query: 869  KTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRHVN 690
            KTALLHDCTLLC WSLEECGRYLET K+YENKPADLIQGQMD+DY SRL+HALT VR VN
Sbjct: 183  KTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYSSRLHHALTTVRRVN 242

Query: 689  KTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPSNPEI 510
            KTDVVTLGSTFGSL+NIMDASMEDLARCPGIGERKVKRLYD FHEPFKRVV   P  P  
Sbjct: 243  KTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPVVP-- 300

Query: 509  EVPINPD---GAATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGRKTGKP 342
            + P+  D    +  E  E + E  +ANK RKKEPE ++KSALS+AFAK +     K G  
Sbjct: 301  QTPVQKDTEPSSVDEVAEMEMEEANANKHRKKEPELTVKSALSSAFAKCAT---NKLGNK 357

Query: 341  LTNEGKLESSATAAEANVEDKNIS 270
                 K+  ++TA ++  E +  S
Sbjct: 358  KFQREKVGETSTAIDSEAETRKTS 381


>ref|XP_006471950.1| PREDICTED: DNA excision repair protein ERCC-1-like [Citrus sinensis]
          Length = 394

 Score =  475 bits (1223), Expect = e-131
 Identities = 253/387 (65%), Positives = 288/387 (74%), Gaps = 9/387 (2%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA 1215
            K +I IPSY+EVI ++   + P +LF PS SF+QAFSF+K+S+FY             S 
Sbjct: 21   KTIITIPSYQEVINAT---NPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTSQ 77

Query: 1214 QFHVPPRQTDQSEEGPCTASTSA-----VTSRNVILVSHRQKGNPLLKHIRNVRWSFADI 1050
                 P  +   E+   TAS SA     + SRN ILVS RQKGNPLLK+IRNVRW+FAD+
Sbjct: 78   N----PTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKYIRNVRWAFADV 133

Query: 1049 VCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLEVT 870
            VCDYL+GQN+CALYLSLRYHLLHPDYLYYRIRELQKNFKLR+VLCHVDVEDV KPLLEVT
Sbjct: 134  VCDYLVGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRIVLCHVDVEDVVKPLLEVT 193

Query: 869  KTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRHVN 690
            KTALLHDCTLLC WSLEECGRYLET KVYENKPADLIQGQMD+DYLSRL HALT+VR VN
Sbjct: 194  KTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLTHALTSVRSVN 253

Query: 689  KTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPSNPEI 510
            KTDVVTLGSTFGSL++IMDASMEDLARCPGIGERKVKRLYD FHEPFKRVV   P  P  
Sbjct: 254  KTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPPIP-- 311

Query: 509  EVPINPD---GAATEGKEADKEVGDANKRRKKEPES-IKSALSAAFAKYSDRIGRKTGKP 342
            E P   D    +  E  E +K+  D NKRRKKE ES +KSALSAAFAKY+D+IG+K    
Sbjct: 312  ETPSQKDVERSSVNEVTEVEKDTEDVNKRRKKETESTVKSALSAAFAKYADKIGKK---- 367

Query: 341  LTNEGKLESSATAAEANVEDKNISKDD 261
              N        + + +  E+ N  + D
Sbjct: 368  -KNRSSQVGETSVSNSGTENSNSGQPD 393


>ref|XP_006433263.1| hypothetical protein CICLE_v10001229mg [Citrus clementina]
            gi|557535385|gb|ESR46503.1| hypothetical protein
            CICLE_v10001229mg [Citrus clementina]
          Length = 430

 Score =  475 bits (1223), Expect = e-131
 Identities = 253/387 (65%), Positives = 288/387 (74%), Gaps = 9/387 (2%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA 1215
            K +I IPSY+EVI ++   + P +LF PS SF+QAFSF+K+S+FY             S 
Sbjct: 57   KTIITIPSYQEVINAT---NPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTSQ 113

Query: 1214 QFHVPPRQTDQSEEGPCTASTSA-----VTSRNVILVSHRQKGNPLLKHIRNVRWSFADI 1050
                 P  +   E+   TAS SA     + SRN ILVS RQKGNPLLK+IRNVRW+FAD+
Sbjct: 114  N----PTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKYIRNVRWAFADV 169

Query: 1049 VCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLEVT 870
            VCDYL+GQN+CALYLSLRYHLLHPDYLYYRIRELQKNFKLR+VLCHVDVEDV KPLLEVT
Sbjct: 170  VCDYLVGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRIVLCHVDVEDVVKPLLEVT 229

Query: 869  KTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRHVN 690
            KTALLHDCTLLC WSLEECGRYLET KVYENKPADLIQGQMD+DYLSRL HALT+VR VN
Sbjct: 230  KTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLTHALTSVRSVN 289

Query: 689  KTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPSNPEI 510
            KTDVVTLGSTFGSL++IMDASMEDLARCPGIGERKVKRLYD FHEPFKRVV   P  P  
Sbjct: 290  KTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPPIP-- 347

Query: 509  EVPINPD---GAATEGKEADKEVGDANKRRKKEPES-IKSALSAAFAKYSDRIGRKTGKP 342
            E P   D    +  E  E +K+  D NKRRKKE ES +KSALSAAFAKY+D+IG+K    
Sbjct: 348  ETPSQKDVERSSVNEVTEVEKDTEDVNKRRKKETESTVKSALSAAFAKYADKIGKK---- 403

Query: 341  LTNEGKLESSATAAEANVEDKNISKDD 261
              N        + + +  E+ N  + D
Sbjct: 404  -KNRSSQVGETSVSNSGTENSNSGQPD 429


>gb|ESW16745.1| hypothetical protein PHAVU_007G181700g [Phaseolus vulgaris]
          Length = 393

 Score =  474 bits (1221), Expect = e-131
 Identities = 246/364 (67%), Positives = 284/364 (78%), Gaps = 19/364 (5%)
 Frame = -2

Query: 1388 LIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSAQF 1209
            +I+IPSY+EV+ESSQ+KS P SLF PS SF+QAF+ VK+S+FY              AQ 
Sbjct: 22   VIRIPSYQEVVESSQAKSTPPSLFLPSQSFSQAFASVKSSEFYAPPPPPPQSRET--AQS 79

Query: 1208 HVP-------PRQTDQSEEGPCTASTSAVTSRNVILVSHRQKGNPLLKHIRNVRWSFADI 1050
              P       P     S + P +  + A  +RN ILVSHRQKGNPLLKHIRNVRW+FADI
Sbjct: 80   DAPSSTSTPSPAAAASSTKLPASQVSQASQNRNSILVSHRQKGNPLLKHIRNVRWAFADI 139

Query: 1049 VCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLEVT 870
            VCDY+LGQ++CALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDV KPLLEVT
Sbjct: 140  VCDYMLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVIKPLLEVT 199

Query: 869  KTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRHVN 690
            KTALLHDCTLLC WSLEECGRYLET KVYENKPAD+IQGQMDSDYLSRL HALT VRHVN
Sbjct: 200  KTALLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGQMDSDYLSRLTHALTTVRHVN 259

Query: 689  KTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRV---------- 540
            KTDVVTLG+TFGSL+NIM ASMEDLARCPGIGERKVKRL+D FHEPFKRV          
Sbjct: 260  KTDVVTLGTTFGSLSNIMGASMEDLARCPGIGERKVKRLFDTFHEPFKRVDSSRQATLDT 319

Query: 539  -VPMQPSNPEIEVPINPDGAATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDR 366
             V  +P++P   +  N + ++   ++  + V D +KR+KKEPE ++KSALSAAF KYSDR
Sbjct: 320  SVQNKPASPGSSIRNNTESSSLI-EDKQENVDDVSKRKKKEPEVTVKSALSAAFTKYSDR 378

Query: 365  IGRK 354
            +G++
Sbjct: 379  VGKR 382


>ref|XP_004495745.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cicer arietinum]
          Length = 652

 Score =  473 bits (1217), Expect = e-131
 Identities = 246/370 (66%), Positives = 291/370 (78%), Gaps = 26/370 (7%)
 Frame = -2

Query: 1388 LIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSAQF 1209
            +I+IPSY+EV+ESSQ+KS P SLF PS +F++AF+FVK+S+FY                 
Sbjct: 277  VIRIPSYQEVVESSQAKSTPPSLFIPSQTFSEAFAFVKSSEFYSPPPSL----------- 325

Query: 1208 HVPPRQTDQSEEGPCTASTS----AVTS----------RNVILVSHRQKGNPLLKHIRNV 1071
               P++T QSE    T STS    AV+S          RN ILVS+RQKGNPLLKHIRNV
Sbjct: 326  ---PKETGQSEASSSTPSTSNTVPAVSSKLPSSQQTQNRNAILVSNRQKGNPLLKHIRNV 382

Query: 1070 RWSFADIVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVT 891
            +W+FAD+VCD+LLGQ++CALYLSLRYHLLHPDYLYYRIRELQKNFKLR+VLCHVDVEDV 
Sbjct: 383  KWTFADVVCDFLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRLVLCHVDVEDVV 442

Query: 890  KPLLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHAL 711
            KPLLEVTKTALLHDCTL+CGWSLEECGRYLET KVYENKPAD+IQGQMD+DYLSRL HAL
Sbjct: 443  KPLLEVTKTALLHDCTLVCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLTHAL 502

Query: 710  TAVRHVNKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRV--- 540
            T VRHVNKTDVVTLG+TFGSL+NIM ASMEDLARCPGIGERKVKRLYD FHEPFKRV   
Sbjct: 503  TTVRHVNKTDVVTLGTTFGSLSNIMGASMEDLARCPGIGERKVKRLYDTFHEPFKRVESS 562

Query: 539  --------VPMQPSNPEIEVPINPDGAATEGKEADKEVGDANKRRKKEPE-SIKSALSAA 387
                    V  +P N +I +  N + +++  ++  K V +A+KRRKKEP+ ++K+ALS A
Sbjct: 563  RQAILETSVQNKPDNLDISLRKNAESSSSL-EDKQKGVDNASKRRKKEPDLTVKTALSEA 621

Query: 386  FAKYSDRIGR 357
            FAK+SDR+G+
Sbjct: 622  FAKFSDRVGK 631


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
            communis] gi|223548305|gb|EEF49796.1| excision repair
            cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  473 bits (1217), Expect = e-131
 Identities = 247/375 (65%), Positives = 286/375 (76%), Gaps = 2/375 (0%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA 1215
            K +I+IPSY+EVIESSQ+     SLF+PS +F+QAFSF+K+S+FY             ++
Sbjct: 21   KVVIQIPSYQEVIESSQNPKTE-SLFKPSQTFSQAFSFIKDSEFYTPPPQSSAVSNNANS 79

Query: 1214 QFHVPPRQTDQSEEGPCTASTSAVTSRNVILVSHRQKGNPLLKHIRNVRWSFADIVCDYL 1035
                   QT QS   P  +       RN ILVSHRQKGNPLLKHIRNVRW+FAD+VCDYL
Sbjct: 80   I------QTTQSVPSPSQSVALTGNYRNSILVSHRQKGNPLLKHIRNVRWAFADVVCDYL 133

Query: 1034 LGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLEVTKTALL 855
            LGQN C+LYLSLRYHLLHPDYLYYRIRELQKN+KLRVVLCHVDVEDV KPLLEVTKTALL
Sbjct: 134  LGQNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHVDVEDVVKPLLEVTKTALL 193

Query: 854  HDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRHVNKTDVV 675
            HDCTLLC WSLEECGRYLET K+YENKPADLIQGQMD+DYLSRL HALT +RHVNKTDVV
Sbjct: 194  HDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYLSRLTHALTTIRHVNKTDVV 253

Query: 674  TLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPSNPEIEVPIN 495
            TLGSTFGSL+NIMDASMEDLARCPGIGERKVKRLYD FHEPFKRVV   P+ PE     +
Sbjct: 254  TLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPAVPETSQKDS 313

Query: 494  PDGAATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGRKTGKPLTNEGK-L 321
                  E  E  K   D +K RKKEPE ++KSALSAAF+KY++   ++T K   +EG+  
Sbjct: 314  EPALVDEVTEVGKGEYDESKWRKKEPELTVKSALSAAFSKYANTFVKRTDK---SEGENA 370

Query: 320  ESSATAAEANVEDKN 276
              ++ + E   +++N
Sbjct: 371  GETSCSVETGTDNRN 385


>gb|EOY11410.1| DNA excision repair protein ERCC-1 isoform 2 [Theobroma cacao]
          Length = 398

 Score =  465 bits (1196), Expect = e-128
 Identities = 252/391 (64%), Positives = 291/391 (74%), Gaps = 16/391 (4%)
 Frame = -2

Query: 1388 LIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA-- 1215
            +I IPSY+EVIESSQ KS P SLF PS SF+QAF+F+K+S+FY              +  
Sbjct: 20   VIGIPSYKEVIESSQIKSTPPSLFTPSQSFSQAFNFIKSSEFYSPPPAPPAPSSAAISTP 79

Query: 1214 ----QFHVPPRQTD----QSEEGPCTASTSAVTS--RNVILVSHRQKGNPLLKHIRNVRW 1065
                + +VP          +   P  AS+S+ +S  RN ILVSHR           NVRW
Sbjct: 80   RPVGEANVPSSSAAAAAASASASPVAASSSSNSSQSRNAILVSHR-----------NVRW 128

Query: 1064 SFADIVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKP 885
            +FADIVCDYLLGQN+CALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDV KP
Sbjct: 129  AFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKP 188

Query: 884  LLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTA 705
            LLEVTKTALLHDCTLLCGWSLEECGRYLET KVYENKPADLIQGQMD+DYLSRLNHALT 
Sbjct: 189  LLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLNHALTT 248

Query: 704  VRHVNKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQP 525
            +RHVNKTDVVTLGSTFG+LA+IMDASMEDLARCPGIGERKVKRLYD FHEPFKRV+   P
Sbjct: 249  IRHVNKTDVVTLGSTFGTLASIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVISSNP 308

Query: 524  SNPEIEVPINPDG---AATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGR 357
              P  E PI  +    +A+E  EA+K+  D +KRRKKEPE ++KSAL+AAFA+Y+ +I +
Sbjct: 309  PVP--ETPILKEAEPCSASEATEAEKDTEDTSKRRKKEPEMNVKSALTAAFARYAGKISK 366

Query: 356  KTGKPLTNEGKLESSATAAEANVEDKNISKD 264
            K+ K   ++GK     +AA   V     SK+
Sbjct: 367  KSTK---SKGKERGGTSAAAEPVAATKNSKE 394


>ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
            gi|355480123|gb|AES61326.1| DNA excision repair protein
            ERCC-1 [Medicago truncatula]
          Length = 401

 Score =  464 bits (1195), Expect = e-128
 Identities = 236/361 (65%), Positives = 281/361 (77%), Gaps = 16/361 (4%)
 Frame = -2

Query: 1388 LIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSAQF 1209
            +I+IPSY+EVIESSQ+KS P SLF PS +F+QAF+FVK+S+FY             +A  
Sbjct: 19   VIRIPSYQEVIESSQTKSTPPSLFVPSQTFSQAFAFVKSSEFYSPPPSLPKENAPSNASS 78

Query: 1208 HVPPRQTDQSEEGPCT-----ASTSAVTSRNVILVSHRQKGNPLLKHIRNVRWSFADIVC 1044
              P   +  +     +     +++    +RN ILVS+RQKGNPLLKHIRNVRW+FAD+VC
Sbjct: 79   STPSTSSATNNAPAASPNLPNSNSQPTQNRNAILVSNRQKGNPLLKHIRNVRWTFADVVC 138

Query: 1043 DYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTKPLLEVTKT 864
            D+LLGQ++CALYLSLRYHLLHPDYLY+RIRELQKNFKLRVVLCHVDVEDV KPLLEVTKT
Sbjct: 139  DFLLGQSSCALYLSLRYHLLHPDYLYHRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKT 198

Query: 863  ALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALTAVRHVNKT 684
            ALLHDCTLLCGWSLEECGRYLET KVYENKPAD+IQGQMD+DYLSRL HALT VRHVNKT
Sbjct: 199  ALLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLTHALTTVRHVNKT 258

Query: 683  DVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQPSNPEIEV 504
            DVVTLG+ FGSL+NIM ASMEDLARCPGIGERKVKRL+D FHEPFKRV   + + PE  V
Sbjct: 259  DVVTLGTNFGSLSNIMGASMEDLARCPGIGERKVKRLFDTFHEPFKRVESSRQAIPETSV 318

Query: 503  P----------INPDGAATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYSDRIGR 357
                       IN   +++  ++  K+   A+KR+KKEPE +++SALS AFAK S+R G+
Sbjct: 319  QNQPTSQDTSVINNTESSSSLEDIHKDADSASKRKKKEPEFTVRSALSVAFAKLSERAGK 378

Query: 356  K 354
            +
Sbjct: 379  R 379


>ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis thaliana]
            gi|55976606|sp|Q9MA98.1|ERCC1_ARATH RecName: Full=DNA
            excision repair protein ERCC-1; Short=AtERCC1;
            Short=AtRAD10; AltName: Full=Ultraviolet hypersensitive 7
            gi|6729031|gb|AAF27027.1|AC009177_17 putative nucleotide
            repair protein [Arabidopsis thaliana]
            gi|9800490|gb|AAF99316.1|AF276082_1 ERCC1 [Arabidopsis
            thaliana] gi|15215614|gb|AAK91352.1| AT3g05210/T12H1_18
            [Arabidopsis thaliana] gi|21435979|gb|AAM51569.1|
            AT3g05210/T12H1_18 [Arabidopsis thaliana]
            gi|21618171|gb|AAM67221.1| putative nucleotide repair
            protein [Arabidopsis thaliana]
            gi|332640684|gb|AEE74205.1| DNA excision repair protein
            ERCC-1 [Arabidopsis thaliana]
          Length = 410

 Score =  464 bits (1193), Expect = e-128
 Identities = 245/386 (63%), Positives = 288/386 (74%), Gaps = 19/386 (4%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA 1215
            + +I +PSY+EV+ESSQ+KS P SLF+PS SF+QAF+FVK+SD Y               
Sbjct: 25   QIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPPSSAAASSSQP 84

Query: 1214 Q--FHVP-----PRQTDQSEEGPCTASTSAVTS-----RNVILVSHRQKGNPLLKHIRNV 1071
                 VP       QTD +       +T +V S     RN ILVSHRQKGNPLLKHIRNV
Sbjct: 85   SGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRNAILVSHRQKGNPLLKHIRNV 144

Query: 1070 RWSFADIVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVT 891
            +W F+DI+ DY+LGQN+CALYLSLRYHLLHPDYLY+RIRELQKNFKL VVLCHVDVED  
Sbjct: 145  KWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLCHVDVEDTV 204

Query: 890  KPLLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHAL 711
            KPLLEVTKTALLHDCTLLC WS+ EC RYLET KVYENKPADLIQGQMD+DYLSRLNH+L
Sbjct: 205  KPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSL 264

Query: 710  TAVRHVNKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPM 531
            T++RHVNK+DVVTLGSTFGSLA+I+DASMEDLARCPGIGERKVKRLYD FHEPFKR    
Sbjct: 265  TSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVKRLYDTFHEPFKRATSS 324

Query: 530  QPS---NPEIEVPINPDGAATEGKEADKE-VGDANKRRKKEPE---SIKSALSAAFAKYS 372
             PS    P  E P+  D  + E  E D++ V D+ KR+KKEPE   ++K+ALSA FA+YS
Sbjct: 325  YPSVVEPPIPEAPVEKDVNSEEPVEEDEDFVEDSRKRKKKEPEPEKTVKTALSAVFARYS 384

Query: 371  DRIGRKTGKPLTNEGKLESSATAAEA 294
            DR+ +K  K      K + + TA++A
Sbjct: 385  DRLSKKKEKQ-----KEKDTTTASDA 405


>ref|XP_006408101.1| hypothetical protein EUTSA_v10020823mg [Eutrema salsugineum]
            gi|557109247|gb|ESQ49554.1| hypothetical protein
            EUTSA_v10020823mg [Eutrema salsugineum]
          Length = 413

 Score =  462 bits (1189), Expect = e-127
 Identities = 244/384 (63%), Positives = 289/384 (75%), Gaps = 22/384 (5%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA 1215
            + +I +PSY+EV+ESSQ+KS P SLF+PS SF+QAF+FVK+SD Y             ++
Sbjct: 25   QIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSAPPPPPPPPSSAAS 84

Query: 1214 QFHVP-------PRQTDQSEEGPCTASTSAVT----------SRNVILVSHRQKGNPLLK 1086
               +P         QT Q++    ++ST   T          SRN ILVS+RQKGNPLLK
Sbjct: 85   PSKLPGASQVPSTSQTLQTDVASSSSSTPVATGDSLSSNTTQSRNAILVSNRQKGNPLLK 144

Query: 1085 HIRNVRWSFADIVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVD 906
            HIRNV+W F++I+ DYLLGQ+TCALYLSLRYHLLHPDYLY+RIRELQKNFKLR+VLCHVD
Sbjct: 145  HIRNVKWVFSEIIPDYLLGQSTCALYLSLRYHLLHPDYLYFRIRELQKNFKLRIVLCHVD 204

Query: 905  VEDVTKPLLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSR 726
            VED  KPLLEVTKTALLHDCTLLC WSL EC RYLET KVYENKPADLIQGQMD+DYLSR
Sbjct: 205  VEDSVKPLLEVTKTALLHDCTLLCAWSLTECARYLETIKVYENKPADLIQGQMDTDYLSR 264

Query: 725  LNHALTAVRHVNKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFK 546
            LNH+LT++RHVNK+DVVTLGSTFGSLA+IMDASMEDLARCPGIGERKVKRLYD FHEPFK
Sbjct: 265  LNHSLTSIRHVNKSDVVTLGSTFGSLAHIMDASMEDLARCPGIGERKVKRLYDTFHEPFK 324

Query: 545  RVVPMQPS--NPEIEVPIN-PDGAATEGKEADKE-VGDANKRRKKEPE-SIKSALSAAFA 381
            R     PS   P I   +N  D  + E  EAD++ V D+ KR++KEPE ++K+ALSA FA
Sbjct: 325  RATSSYPSVIEPIIPETVNQKDVNSEEPVEADEDFVEDSRKRKRKEPEKTVKTALSAVFA 384

Query: 380  KYSDRIGRKTGKPLTNEGKLESSA 309
            +YSD++ +K  K        ES A
Sbjct: 385  RYSDKLSKKKEKQKEKGSTTESDA 408


>ref|XP_002882403.1| hypothetical protein ARALYDRAFT_477808 [Arabidopsis lyrata subsp.
            lyrata] gi|297328243|gb|EFH58662.1| hypothetical protein
            ARALYDRAFT_477808 [Arabidopsis lyrata subsp. lyrata]
          Length = 407

 Score =  462 bits (1189), Expect = e-127
 Identities = 241/378 (63%), Positives = 281/378 (74%), Gaps = 16/378 (4%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXS- 1218
            + +I +PSY+EVIESSQ+KS P SLF+PS SF+QAF+FVK+SD Y               
Sbjct: 25   QIIIGVPSYQEVIESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPSSSAASSSSQP 84

Query: 1217 -AQFHVP----PRQTDQSEEGPCTASTSAVTS-----RNVILVSHRQKGNPLLKHIRNVR 1068
                 VP    P QTD +       +T ++ S     RN ILVSHRQKGNPLLKHIRNV+
Sbjct: 85   PGASQVPNSSQPLQTDGASSSSTPVATGSLPSNTTQTRNAILVSHRQKGNPLLKHIRNVK 144

Query: 1067 WSFADIVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVTK 888
            W F+DI+ DY+LGQ++CALYLSLRYHLLHPDYLY+RIRELQKNFKL VVLCHVDVED  K
Sbjct: 145  WVFSDIIPDYVLGQSSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLCHVDVEDTVK 204

Query: 887  PLLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRLNHALT 708
            PLLEVTKTALLHDCTLLC WS+ EC RYLET KVYENKPADLIQGQMD+DYLSRLNH+LT
Sbjct: 205  PLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLT 264

Query: 707  AVRHVNKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKRVVPMQ 528
            ++RHVNK+DVVTLGSTFGSLA+I+DASMEDLARCPGIGERKV+RLYD FHEPFKR     
Sbjct: 265  SIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVRRLYDTFHEPFKRATSSY 324

Query: 527  PSNPEIEVPINPDGAATEGKEADKE----VGDANKRRKKEPE-SIKSALSAAFAKYSDRI 363
            PS  E  +P  P       KE   E    V D+ KR+KKEPE ++K+ALSA FA+YSD++
Sbjct: 325  PSVVEPTIPEAPVQKNVSSKEPVVEDEDFVEDSRKRKKKEPEKTVKTALSAVFARYSDKL 384

Query: 362  GRKTGKPLTNEGKLESSA 309
             +K  K    +   ES A
Sbjct: 385  SKKKEKQKEKDATTESDA 402


>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis sativus]
          Length = 391

 Score =  453 bits (1166), Expect = e-125
 Identities = 244/383 (63%), Positives = 282/383 (73%), Gaps = 20/383 (5%)
 Frame = -2

Query: 1394 KFLIKIPSYEEVIESSQSKSAPVSLFEPSTSFTQAFSFVKNSDFYRXXXXXXXXXXXXSA 1215
            K +IKIPSY+EVI+SSQ  S          SF+QAF+F+K+S+FY              +
Sbjct: 20   KTIIKIPSYQEVIDSSQPNSQ---------SFSQAFAFLKSSEFYSPPPKPPSPSS---S 67

Query: 1214 QFHVP-----PRQTDQSEEGPCTASTSAVT-----------SRNVILVSHRQKGNPLLKH 1083
            Q   P     PR+ DQ +    + S SA T           SRN ILVS+RQKGNPLLKH
Sbjct: 68   QSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKGNPLLKH 127

Query: 1082 IRNVRWSFADIVCDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDV 903
            IRNVRW+FAD+V DYLLGQ++CALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+LCHVDV
Sbjct: 128  IRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDV 187

Query: 902  EDVTKPLLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDSDYLSRL 723
            EDV KPLLEVTKTALLHDCTLLC WSLEECGRYLET KVYENKPADLIQG MD+DYLSRL
Sbjct: 188  EDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRL 247

Query: 722  NHALTAVRHVNKTDVVTLGSTFGSLANIMDASMEDLARCPGIGERKVKRLYDAFHEPFKR 543
             H LT+VRHVNKTDVVTLG+TFGSL++IMDASMEDLARCPGIGERKV+RLYD FHEPFKR
Sbjct: 248  THVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKR 307

Query: 542  VVPMQPSNPE--IEVPINPDGAATEGKEADKEVGDANKRRKKEPE-SIKSALSAAFAKYS 372
            VV   P+ PE   ++   P  +  E     K + +   + KKEP+ ++KSALSAAFAKY+
Sbjct: 308  VVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAAFAKYA 367

Query: 371  DRIGRKTGKPLTNE-GKLESSAT 306
            D+I +    P   E G+ ESS T
Sbjct: 368  DKIAKSGSIPQEKEKGEPESSNT 390