BLASTX nr result
ID: Catharanthus23_contig00015392
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00015392 (1102 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 286 1e-74 gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 273 9e-71 emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 270 8e-70 gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 268 2e-69 dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 263 1e-67 dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 263 1e-67 gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 261 5e-67 gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 260 8e-67 emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 260 8e-67 ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 259 1e-66 gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 259 2e-66 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 258 3e-66 gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 256 1e-65 emb|CAB72467.1| putative protein [Arabidopsis thaliana] 253 1e-64 gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 252 2e-64 gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 250 8e-64 emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 249 1e-63 gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 248 4e-63 dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 246 9e-63 emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 246 1e-62 >emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1110 Score = 286 bits (731), Expect = 1e-74 Identities = 138/300 (46%), Positives = 198/300 (66%) Frame = +2 Query: 203 GVGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVP 382 G+ E F ++ + IN +++L+PK + ATRV EFRPI+CC V+YK+I+K++T+R+ + Sbjct: 480 GIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGII 539 Query: 383 PDLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQE 562 +++++AQS F+ GR + +NI LA E++RGY RK +P+C +K+DIRKAYD++ W FL+ Sbjct: 540 GEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLET 599 Query: 563 VLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYL 742 +L FP F+GWIM CV++ S+S+ +NG F+ ++GLRQGDPMSP LF LCMEYL Sbjct: 600 LLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYL 659 Query: 743 SRSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKV 922 SR L + FNFH KC++ I+HL FADDL++F R D SS+ + F Sbjct: 660 SRCLEELK---GSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHA 716 Query: 923 SGLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 SGL A KSNI+ GV+++ + G LPFRYLGVPL+ K L A PL+E Sbjct: 717 SGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVE 776 >gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus] Length = 1214 Score = 273 bits (698), Expect = 9e-71 Identities = 136/299 (45%), Positives = 201/299 (67%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 V E FR+G+LL Q N ++++PK A R+ EFRPISCCN +YKVI+KL+ RL + P Sbjct: 489 VQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLARRLENILP 548 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 I +QSAFVKGR + EN+ LA E+++G+ + + + LK+D+RKA+D++ W F+ E Sbjct: 549 LWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGFIIET 608 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L+ + P F+ WI C+TS SFS+ ++G + G+FKG +GLRQGDP+SP LFV+ ME LS Sbjct: 609 LKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILS 668 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 R L + ++ +H K + RIS LAFADDLMIF G +SS+ + V+++F +S Sbjct: 669 RLLEN---KFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNLS 725 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL + KS ++ AG+E+ +KE L GF+ G PFRYLG+PL + L+ +DY+ L++ Sbjct: 726 GLEMNTEKSAVYTAGLEDTDKED-TLAFGFVNGTFPFRYLGLPLLHRKLRRSDYSQLID 783 >emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1114 Score = 270 bits (690), Expect = 8e-70 Identities = 134/300 (44%), Positives = 197/300 (65%) Frame = +2 Query: 203 GVGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVP 382 G+ + F G + K IN ++LIPK A ++RPI+CC+ LYK+I+K++T RL V Sbjct: 483 GILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAVI 542 Query: 383 PDLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQE 562 +++D AQ+ F+ R + +NI LA E++RGY R+ +P+C +K+DIRKAYD++ W FL+ Sbjct: 543 TEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLES 602 Query: 563 VLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYL 742 +L+ L FP +FI WIMACV + S+S+ +NG F ++GLRQGDP+SP LF L MEYL Sbjct: 603 MLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYL 662 Query: 743 SRSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKV 922 SR + +M + FNFH KC++ +++HL FADDL++F R D+SS+ + ++F K Sbjct: 663 SRCMGNMCKDPE---FNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKA 719 Query: 923 SGLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 SGL+A KS I+ GV +E E + G LPFRYLGVPL+ K L + PL++ Sbjct: 720 SGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLID 779 >gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] Length = 872 Score = 268 bits (686), Expect = 2e-69 Identities = 139/299 (46%), Positives = 197/299 (65%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 V F+ G L K IN I++LIPK A + ++RPISCCNVLYKVI+K++ +RL + P Sbjct: 143 VQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLLP 202 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 I + QSAFVK R ++EN+ LA E+++ Y + + +C +KIDI KA+D++ W FL Sbjct: 203 RFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNT 262 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L ++F FI WI C+T+ SFS+++NGD+VG+F+ KRGLRQG +SP LFV+CM+ LS Sbjct: 263 LVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLS 322 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 + L+ + F FH KCQ+ ++HL+FADDLM+ + G + S+ + +V D F K S Sbjct: 323 KMLDKAAGVRK---FGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRS 379 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GLR KS +++AGV K+ I F G+LP RYLG+PL K L ADY+PLLE Sbjct: 380 GLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLE 438 >dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] Length = 1072 Score = 263 bits (671), Expect = 1e-67 Identities = 138/299 (46%), Positives = 192/299 (64%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 + E F +G+LLKQ N + LIPK+ A + EFRPISC N LYKVI+KL+T RL + Sbjct: 350 IHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLS 409 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 +I +QSAF+ GRS+ EN+ LA E++ GY R +P+ LK+D++KA+D++ W F+ Sbjct: 410 AVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAA 469 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L+ L P +I WI C+T+PSF++ +NG GFF+ +GLRQGDP+SP LFVL ME S Sbjct: 470 LRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFS 529 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 + L RY ++H K ISHL FADD+MIF G SSS+ +C+ +D+F S Sbjct: 530 KLL---YSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWS 586 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL+ + KS +F AG++ E+ GF G P RYLG+PL + L++ADY PLLE Sbjct: 587 GLKVNKDKSQLFQAGLDLSER-ITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLE 644 >dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] Length = 1072 Score = 263 bits (671), Expect = 1e-67 Identities = 138/299 (46%), Positives = 192/299 (64%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 + E F +G+LLKQ N + LIPK+ A + EFRPISC N LYKVI+KL+T RL + Sbjct: 350 IHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLS 409 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 +I +QSAF+ GRS+ EN+ LA E++ GY R +P+ LK+D++KA+D++ W F+ Sbjct: 410 AVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAA 469 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L+ L P +I WI C+T+PSF++ +NG GFF+ +GLRQGDP+SP LFVL ME S Sbjct: 470 LRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFS 529 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 + L RY ++H K ISHL FADD+MIF G SSS+ +C+ +D+F S Sbjct: 530 KLL---YSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWS 586 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL+ + KS +F AG++ E+ GF G P RYLG+PL + L++ADY PLLE Sbjct: 587 GLKVNKDKSQLFQAGLDLSER-ITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLE 644 >gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] Length = 740 Score = 261 bits (666), Expect = 5e-67 Identities = 132/299 (44%), Positives = 194/299 (64%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 + F G L K +N I++LIPK AT + ++RPISCCNV+YKVI+K++ +RL + P Sbjct: 69 IKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLP 128 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 I + QSAFV+ R ++EN+ LA E+++ Y + +P+C +KIDI KA+D++ W+FL Sbjct: 129 TFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNT 188 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L+ L+FP F WI C+++ +FS+++NG++ GFF KRGLRQG +SP LFV+CM LS Sbjct: 189 LEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLS 248 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 ++ + +R G +H KC++ ++HL FADDLM+F G SV V + F S Sbjct: 249 HMID-VAAVHRNIG--YHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKS 305 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL KS ++LAGV E + +IL F G+LP RYLG+PL K + ADY+PLL+ Sbjct: 306 GLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLD 364 >gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] Length = 1213 Score = 260 bits (664), Expect = 8e-67 Identities = 137/299 (45%), Positives = 191/299 (63%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 + E F +G LLKQ N I LIPK T +FRPISC N LYKVI +L+TDRL ++ Sbjct: 490 IKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLS 549 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 +I AQSAF+ GRS+ EN+ LA +++ GY +P+ LK+D++KA+D++ W F+ Sbjct: 550 GVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAA 609 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L+ L P FI WI C+++P+F++ ING GFFK +GLRQGDP+SP LFVL ME S Sbjct: 610 LRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFS 669 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 N + RY ++H K ISHL FADD+MIF G S S+ +C+ +D+F S Sbjct: 670 ---NLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWS 726 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL+ + KS+++LAG+ + E + GF G LP RYLG+PL + L++A+Y PLLE Sbjct: 727 GLKVNKDKSHLYLAGLNQLE-SNANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLE 784 >emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1| putative protein [Arabidopsis thaliana] Length = 1141 Score = 260 bits (664), Expect = 8e-67 Identities = 139/299 (46%), Positives = 193/299 (64%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 V E F +G LLKQ N I LIPK A+ +FRPISC N LYKVI +L+TDRL K+ Sbjct: 468 VREFFISGNLLKQWNATTIVLIPKFPNASCTSDFRPISCMNTLYKVIARLLTDRLQKLLS 527 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 +I +QSAF+ GR + EN+ LA E++ GY + + + LK+D+RKA+D++ W F+ Sbjct: 528 CVISPSQSAFLPGRLLAENVLLATEMVHGYNWRNISLRGMLKVDLRKAFDSVRWEFIIAA 587 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L L P FI WI C+++P+F++ +NG GFFK +GLRQGDP+SP LFVL ME S Sbjct: 588 LLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGLRQGDPLSPYLFVLAMEVFS 647 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 + LN R+ +H K ISHL FADD+MIF G SSS+ +C+ +++F S Sbjct: 648 KLLN---SRFDSGYIRYHPKASDLSISHLMFADDVMIFFDGGSSSLHGICETLEDFASWS 704 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL+ + KS+ F AG+E+ E+ + L GF +G LP RYLG+PL + L++A+Y PLLE Sbjct: 705 GLKVNNDKSHFFCAGLEQAER-NSLAAYGFPQGCLPIRYLGLPLMCRKLRIAEYEPLLE 762 >ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca subsp. vesca] Length = 958 Score = 259 bits (662), Expect = 1e-66 Identities = 131/301 (43%), Positives = 185/301 (61%), Gaps = 2/301 (0%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 V E F G LL ++N II+L+PK T + +FRPISCCN YK+I KL+ +RL Sbjct: 317 VKEFFSYGSLLMELNSTIITLVPKVANPTTMSDFRPISCCNTFYKIIAKLLANRLKGTLH 376 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 ++ +QS F+ GR + +NI LAQEI+ Y + P+CT +D+ KA DT+ W F+ Sbjct: 377 LIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCTFMVDMMKANDTVEWDFIIAT 436 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 LQ + P IGWI +C++S FS+ +NG++ GFF +RGLRQGDP+SP LFV+ ME LS Sbjct: 437 LQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVIAMEVLS 496 Query: 746 RSLNHMTRRYRRCG--FNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGK 919 + +R C F +H +C Q +SHL FADDL++F GD +SV + NF Sbjct: 497 LCI----QRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFES 552 Query: 920 VSGLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLL 1099 +S L+A+ +S IFLAGV+ + +L T F G P RYLG+PL L++ D +PLL Sbjct: 553 LSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLL 612 Query: 1100 E 1102 + Sbjct: 613 D 613 >gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1529 Score = 259 bits (661), Expect = 2e-66 Identities = 132/299 (44%), Positives = 192/299 (64%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 + F G L K +N I++LIPK A + ++RPISCCNVLYKVI+K++ +RL + P Sbjct: 793 IQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLP 852 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 I + QSAFVK R ++EN+ LA E+++ Y ++ TP+C +KIDI KA+D++ W+FL Sbjct: 853 SFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNT 912 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L+ L+FP F WI C+++ +FS+++NG++ GFF RGLRQG +SP LFV+CM LS Sbjct: 913 LEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLS 972 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 ++ +R G +H KC++ ++HL FADDLM+F G S+ V V F S Sbjct: 973 HMIDE-AAVHRNIG--YHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRS 1029 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL+ KS I+LAGV ++ L + F G+LP RYLG+PL K + ADY+PL+E Sbjct: 1030 GLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIE 1088 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 258 bits (659), Expect = 3e-66 Identities = 133/299 (44%), Positives = 187/299 (62%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 V F G L K IN I++LIPK A + ++RPISCCNVLYKVI+K++ +RL V P Sbjct: 496 VQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLP 555 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 I QSAFVK R ++EN+ LA E+++ Y + + +C +KIDI KA+D++ W FL V Sbjct: 556 KFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINV 615 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 +L FP FI WI C+T+ SFS+++NG++ G+F+ RGLRQG +SP LFV+CM+ LS Sbjct: 616 FTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLS 675 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 + L+ F +H KC+ ++HL+FADDLM+ + G S+ + +V D F K S Sbjct: 676 KMLDKAAAARH---FGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWS 732 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GLR KS ++LAG+ + + F G+LP RYLG+PL K L D PLLE Sbjct: 733 GLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLE 791 >gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1216 Score = 256 bits (654), Expect = 1e-65 Identities = 127/299 (42%), Positives = 192/299 (64%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 + F G L K +N I++LIPK K A + ++RPISCCNVLYK I+K++ +RL ++ P Sbjct: 217 IQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILP 276 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 I QSAFVK R ++EN+ LA E+++ Y + + +C +KIDI KA+D++ W FL V Sbjct: 277 KFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHV 336 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L ++FPG FI WI C+++ SFS+++NG++ G+F+ RGLRQG +SP LFV+ M+ LS Sbjct: 337 LAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLS 396 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 R L+ F +H +C+ ++HL FADDLMI T G SV + +V++ F Sbjct: 397 RMLDKAAGARE---FGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKL 453 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL+ K+ ++LAGV + ++ + F G+LP RYLG+PL K L +DY+PL++ Sbjct: 454 GLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLID 512 >emb|CAB72467.1| putative protein [Arabidopsis thaliana] Length = 762 Score = 253 bits (645), Expect = 1e-64 Identities = 128/299 (42%), Positives = 187/299 (62%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 + F G L K +N I++LIPK + + ++RPISCCNV+YKVI+K++ +RL + P Sbjct: 49 IQSFFALGFLPKGVNSTILALIPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLLP 108 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 I QS+FVK R ++EN+ LA ++++ Y + + +C +KIDI KA D++ W FL Sbjct: 109 QFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLINT 168 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L + FP +FI WI C+T+PSFS+++NG++ GFF+ RGLRQG +SP LFV+CM+ LS Sbjct: 169 LTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLS 228 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 + L+ + R +H C++ ++HL+FADDLMI T G S+ + +V D F K S Sbjct: 229 KLLDKVVGIGR---IGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWS 285 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL+ KS IF AG+ + + F G LP RYLG+PL K L DY PL+E Sbjct: 286 GLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIE 344 >gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score: 72.31) [Arabidopsis thaliana] Length = 928 Score = 252 bits (643), Expect = 2e-64 Identities = 132/299 (44%), Positives = 190/299 (63%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 + F G L K IN I++LIPK K A + ++RPISCCNVLYKVI+K++ +RL V P Sbjct: 384 IQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVLP 443 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 I QSAFVK R ++EN+ LA EI++ Y + + +C LKIDI KA+D++ W+FL V Sbjct: 444 KFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLINV 503 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L+ ++FP F WI C+T+ SFS+++NG++ G F R LRQG +SP LFV+ M+ LS Sbjct: 504 LEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSSARELRQGCSLSPYLFVISMDVLS 563 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 + L+ + F +H KC+ ++HL+FADDLMI + G S+ + +V+ F K S Sbjct: 564 KMLDKAVGARQ---FGYHPKCRAIGLTHLSFADDLMILSDGKVRSIDGIVKVLYEFAKWS 620 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL+ KS ++LAGV+ + I+ F G+LP RYLG+PL K L +D PL+E Sbjct: 621 GLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLPLIE 679 >gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13) [Arabidopsis thaliana] Length = 1164 Score = 250 bits (638), Expect = 8e-64 Identities = 134/299 (44%), Positives = 187/299 (62%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 + E F +GKLLKQ N + LIPK A+ + +FRPISC N +YKVI+KL+TDRL P Sbjct: 387 IHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVISKLLTDRLKDFLP 446 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 I +QSAF+ GR +EN+ LA E++ GY +K P LK+D+RKA+D++ W F+ Sbjct: 447 AAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFIVSA 506 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 L+ L+ P F WI+ C+++ SFS+ +NG G F +GLRQGDPMSP LFVL ME S Sbjct: 507 LRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFS 566 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 L RY +H K Q ISHL FADD+MIF G SSS+ + + +++F S Sbjct: 567 GLLQ---SRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWS 623 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 GL + K+ ++ AG+ + E + + + GF G LP RYLG+PL + L +A+Y PL+E Sbjct: 624 GLLMNTNKTQLYHAGLSQSESDS-MASYGFKLGSLPVRYLGLPLMSRKLTIAEYAPLIE 681 >emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana] gi|7267919|emb|CAB78261.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 662 Score = 249 bits (637), Expect = 1e-63 Identities = 124/286 (43%), Positives = 184/286 (64%) Frame = +2 Query: 245 INHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPPDLIDKAQSAFVKG 424 +N I++LIPK A + ++RPISCCNVLYKVI+K++ +RL +V P I QSAF+K Sbjct: 27 VNSTILALIPKKMEAKEIKDYRPISCCNVLYKVISKIIANRLKRVLPQFIAGNQSAFIKD 86 Query: 425 RSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGW 604 R ++EN+ LA E+++ Y + + +C +KIDI KA+D++ W FL+ VL LDFP F+ W Sbjct: 87 RLLIENLLLATELVKDYHKDSVSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHW 146 Query: 605 IMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLSRSLNHMTRRYRRC 784 IM CVT+ SFS+++N ++ G+F RGLRQG ++P LFV+ M+ LS+ L+ + Sbjct: 147 IMLCVTTASFSVQVNRELAGYFNSLRGLRQGCSLTPYLFVIVMDVLSKKLDRAAGLRK-- 204 Query: 785 GFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVSGLRAHALKSNIFL 964 F +H KC+ ++HL+FADD+M+ T G S+ + +V D+F K SGL+ K+ I+ Sbjct: 205 -FGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFDSFAKQSGLKISMAKTTIYF 263 Query: 965 AGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 AG+ + + F GRLP RYL +PL K DY+PLLE Sbjct: 264 AGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYSPLLE 309 >gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1277 Score = 248 bits (632), Expect = 4e-63 Identities = 126/287 (43%), Positives = 186/287 (64%) Frame = +2 Query: 242 QINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPPDLIDKAQSAFVK 421 ++N I++LIPK AT + ++RPISCCNV+YKVI+K++ +RL + P I + QSAFV+ Sbjct: 650 RLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVR 709 Query: 422 GRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIG 601 R ++EN+ LA E+++ Y + +P+C +KIDI KA+D++ W+FL L+ L FP F Sbjct: 710 ERLLMENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALKFPEKFRH 769 Query: 602 WIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLSRSLNHMTRRYRR 781 WI C+++ +FS+++N + GFF KRGLRQG +SP LFV+CM LS ++ + +R Sbjct: 770 WIKLCISTATFSVQVNSEQAGFFGSKRGLRQGCALSPYLFVICMNVLSHMID-VAAVHRN 828 Query: 782 CGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVSGLRAHALKSNIF 961 G +H KC++ ++HL FADDLM+F G SV V + +F SGL KS ++ Sbjct: 829 IG--YHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLY 886 Query: 962 LAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADYNPLLE 1102 LA V E + +IL F G+LP RYLG PL K + ADY+PLL+ Sbjct: 887 LAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLD 933 >dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 893 Score = 246 bits (629), Expect = 9e-63 Identities = 132/294 (44%), Positives = 186/294 (63%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 V E FR+G+LLKQ N + LIPK ++++ +FRPISC N LYKVI KL+T RL K+ Sbjct: 491 VQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLN 550 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 ++I +QSAF+ GR + EN+ LA EI+ GY K + + LK+D+RKA+D++ W F+ Sbjct: 551 EVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISA 610 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 + L P F+ WI C+++P FS+ +NG GFFK +GLRQGDP+SP LFVL ME S Sbjct: 611 FRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFS 670 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 L R+ ++H K ISHL FADD+M+F G SSS+ + + +D+F S Sbjct: 671 SLLK---ARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWS 727 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADY 1087 GL + K+N++LAG +E E I GF LP RYLG+PL + LK+++Y Sbjct: 728 GLHVNKDKTNLYLAGTDEVEALAI-SHYGFPISTLPIRYLGLPLMSRKLKISEY 780 >emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein [Arabidopsis thaliana] Length = 893 Score = 246 bits (628), Expect = 1e-62 Identities = 132/294 (44%), Positives = 185/294 (62%) Frame = +2 Query: 206 VGELFRTGKLLKQINHCIISLIPKSKMATRVGEFRPISCCNVLYKVITKLMTDRLGKVPP 385 V E FR+G+LLKQ N + LIPK ++++ +FRPISC N LYKVI KL+T RL K+ Sbjct: 491 VQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLN 550 Query: 386 DLIDKAQSAFVKGRSMVENIHLAQEIMRGYCRKRTTPKCTLKIDIRKAYDTISWRFLQEV 565 ++I +QSAF+ GR + EN+ LA EI+ GY K + + LK+D+RKA+D++ W F+ Sbjct: 551 EVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISA 610 Query: 566 LQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRGLRQGDPMSPCLFVLCMEYLS 745 + L P F+ WI C+++P FS+ +NG GFFK +GLRQGDP+SP LFVL ME S Sbjct: 611 FRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFS 670 Query: 746 RSLNHMTRRYRRCGFNFHAKCQQNRISHLAFADDLMIFTRGDSSSVGMVCQVVDNFGKVS 925 L R+ +H K ISHL FADD+M+F G SSS+ + + +D+F S Sbjct: 671 SLLK---ARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWS 727 Query: 926 GLRAHALKSNIFLAGVEEQEKEHILLTTGFMKGRLPFRYLGVPLSGKFLKLADY 1087 GL + K+N++LAG +E E I GF LP RYLG+PL + LK+++Y Sbjct: 728 GLHVNKDKTNLYLAGTDEVEALAI-SHYGFPISTLPIRYLGLPLMSRKLKISEY 780