BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00015384
         (1599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Popu...   674   0.0  
gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]     669   0.0  
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   667   0.0  
gb|EOY03346.1| Tetratricopeptide repeat (TPR)-like superfamily p...   666   0.0  
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi...   666   0.0  
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi...   665   0.0  
gb|EMJ16220.1| hypothetical protein PRUPE_ppa003340mg [Prunus pe...   664   0.0  
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,...   661   0.0  
ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citr...   653   0.0  
ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containi...   651   0.0  
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   645   0.0  
dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]           645   0.0  
ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containi...   644   0.0  
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi...   641   0.0  
ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Caps...   640   0.0  
ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutr...   640   0.0  
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ...   639   e-180
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi...   636   e-180
ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containi...   635   e-179
gb|ESW35832.1| hypothetical protein PHAVU_001G268500g [Phaseolus...   629   e-177

>ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Populus trichocarpa]
            gi|550320029|gb|EEF04162.2| hypothetical protein
            POPTR_0017s11210g [Populus trichocarpa]
          Length = 639

 Score =  674 bits (1739), Expect = 0.0
 Identities = 334/401 (83%), Positives = 369/401 (92%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+A+LL+KEMR  GV+PDTVSYSTLLS+YV+N+KFVEAL+VF EMNE KC LDLTTC
Sbjct: 236  KLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTC 295

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            N+MIDVYGQLDMAKEAD LFWSMRKMGIEPNVVSYNTLL+VYGE ELFGEAIHLFRLMQ+
Sbjct: 296  NVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQK 355

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KDI QNVVTYNTMIK+YGK+LEHEKA NL+QEMQ+RGIEPNAITYSTIISIWGK GKLDR
Sbjct: 356  KDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDR 415

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AAMLFQKLRSSG EIDQVLYQTMIVAYER+GLVAHAKRLLHELK PD+IPRETAI ILAR
Sbjct: 416  AAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKILAR 475

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DAGE+KDI+V+ CMV+L++RN++P NVIEVFE+MR AGYFPDSN+
Sbjct: 476  AGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNV 535

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNAYGKL EFEKADALY EMQEE CVF DEVHFQMLSLYG RKDF  +E+LFERLD
Sbjct: 536  IALVLNAYGKLHEFEKADALYKEMQEEECVFPDEVHFQMLSLYGARKDFMMIEALFERLD 595

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGGTPR 1203
             D NINKKEL+LVVAS+YER N+LN+AS IM R+S GG  R
Sbjct: 596  SDPNINKKELHLVVASIYERKNRLNDASRIMNRMSKGGVLR 636



 Score =  122 bits (305), Expect = 6e-25
 Identities = 81/385 (21%), Positives = 182/385 (47%), Gaps = 6/385 (1%)
 Frame = +1

Query: 43   LAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAK 222
            +A   P   +Y+ +L   +  +++  A  +F EM       D  T + +I  +G+  M  
Sbjct: 110  IARYSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFD 169

Query: 223  EADGLFW--SMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNT 396
             +  LFW   M +  +  ++V Y+ L+++  +   + +AI +F  ++R  I+ ++V YN+
Sbjct: 170  AS--LFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNS 227

Query: 397  MIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSG 576
            MI ++GK     +A  L++EM+  G+ P+ ++YST++S++ +  K   A  +F ++  + 
Sbjct: 228  MINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAK 287

Query: 577  CEIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEAT 744
            C +D      MI  Y +  +   A RL   +++    P+ +   T + +        EA 
Sbjct: 288  CPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAI 347

Query: 745  WVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAY 924
             +FR        +++  Y  M+++Y ++        + + M+  G  P++   S +++ +
Sbjct: 348  HLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIW 407

Query: 925  GKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKK 1104
            GK  + ++A  L+ +++  G      ++  M+  Y         + L   L    +I ++
Sbjct: 408  GKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRE 467

Query: 1105 ELYLVVASLYERANKLNEASLIMKR 1179
                ++A    RA ++ EA+ + ++
Sbjct: 468  TAIKILA----RAGRIEEATWVFRQ 488


>gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]
          Length = 688

 Score =  669 bits (1727), Expect = 0.0
 Identities = 332/398 (83%), Positives = 371/398 (93%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLL+ EMR AGV+PDTVSYSTLL+MYV+NQKF+EAL+VF+EMNE++C+LDLTTC
Sbjct: 285  KLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIEALSVFSEMNEVRCRLDLTTC 344

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDMAKEAD LFWSMRKMGIEPNVVSYNTLL+VYGEAELFGEAIHLFRLMQR
Sbjct: 345  NIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQR 404

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KDI QNVVTYNTMIKIYGK+LEHEKA NL+QEMQ RGIEPNAITYSTIISIWGK GKLDR
Sbjct: 405  KDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDR 464

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AA+LFQKLRSSG EIDQVLYQTMIVAYE+AGLVAHAKRLLHELKRPDNIPRETAITILA 
Sbjct: 465  AAILFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAITILAG 524

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGR+EEATWVFRQASDAGEIKDI+V+ CM+EL+++NK+  N+ EVF++MR  GYFPDSN+
Sbjct: 525  AGRLEEATWVFRQASDAGEIKDISVFSCMIELFSKNKKYANLTEVFDKMRGVGYFPDSNV 584

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNAYGKL++FEKADA+Y EMQEEGCVFSDEVHFQM+SLYG RKDFK VE LFERL+
Sbjct: 585  IALVLNAYGKLRDFEKADAVYKEMQEEGCVFSDEVHFQMISLYGARKDFKMVEELFERLE 644

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGG 1194
             D NIN KEL+LVVA +YERANKLN+AS IM R++  G
Sbjct: 645  SDPNIN-KELHLVVAGIYERANKLNDASRIMNRMNDRG 681



 Score =  122 bits (306), Expect = 4e-25
 Identities = 82/383 (21%), Positives = 177/383 (46%), Gaps = 4/383 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+  L   +  +++  A  +F EM +     D  T + +I  +G+  M   A   
Sbjct: 164  PSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRYTYSTLITYFGKEGMFDAALSW 223

Query: 238  FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYGK 417
               M +  +  ++V Y+ L+++  +   + +AI +F  ++   I  ++V YN+MI ++GK
Sbjct: 224  LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKWSGITPDLVAYNSMINVFGK 283

Query: 418  TLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVL 597
                 +A  LI EM++ G+ P+ ++YST+++++ +  K   A  +F ++    C +D   
Sbjct: 284  AKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIEALSVFSEMNEVRCRLDLTT 343

Query: 598  YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQAS 765
               MI  Y +  +   A RL   +++    P+ +   T + +   A    EA  +FR   
Sbjct: 344  CNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQ 403

Query: 766  DAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEFE 945
                 +++  Y  M+++Y ++        + + M+K G  P++   S +++ +GK  + +
Sbjct: 404  RKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLD 463

Query: 946  KADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVVA 1125
            +A  L+ +++  G      ++  M+  Y         + L   L    NI ++    ++A
Sbjct: 464  RAAILFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAITILA 523

Query: 1126 SLYERANKLNEASLIMKRLSMGG 1194
                 A +L EA+ + ++ S  G
Sbjct: 524  G----AGRLEEATWVFRQASDAG 542



 Score =  112 bits (279), Expect = 6e-22
 Identities = 78/324 (24%), Positives = 154/324 (47%), Gaps = 4/324 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN  L+    A+ +  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 153  LDWINEQALYTPSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRYTYSTLITYFG 212

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+ SG   D V
Sbjct: 213  KEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKWSGITPDLV 272

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  + +A L   A+ L+ E++     PD +   T +T+     +  EA  VF + 
Sbjct: 273  AYNSMINVFGKAKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIEALSVFSEM 332

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
            ++     D+     M+++Y +         +F  MRK G  P+    + +L  YG+ + F
Sbjct: 333  NEVRCRLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELF 392

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVV 1122
             +A  L+  MQ +    +   +  M+ +YG   + +K  +L + +           Y  +
Sbjct: 393  GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTI 452

Query: 1123 ASLYERANKLNEASLIMKRLSMGG 1194
             S++ +A KL+ A+++ ++L   G
Sbjct: 453  ISIWGKAGKLDRAAILFQKLRSSG 476


>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic [Vitis vinifera]
            gi|296087770|emb|CBI35026.3| unnamed protein product
            [Vitis vinifera]
          Length = 675

 Score =  667 bits (1721), Expect = 0.0
 Identities = 332/398 (83%), Positives = 368/398 (92%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLLL EMR  GV+PDTVSYSTLLSMYV+N K+VEAL+VF+EMNE++C LDLTTC
Sbjct: 274  KLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTC 333

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            N+MIDVYGQLDMAKEAD LFWSMRKMGIEP +VSYNTLL+VYGEAELFGEAIHLFRLMQR
Sbjct: 334  NVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQR 393

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KDI QNVVTYNTMIKIYGK+LEHEKA NL+QEMQ+RGIEPNAITYSTIISIW K GKLDR
Sbjct: 394  KDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDR 453

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AAMLFQKLRSSG EIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILA 
Sbjct: 454  AAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAG 513

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DAGE+KDI V+ CM++L++RN++ TNVIEVF++MR AGYFPDSN+
Sbjct: 514  AGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNV 573

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNA GKL+EFEKADA+Y EM+EEGCVFSDEVHFQMLSLYG R DF+ V+SLFERLD
Sbjct: 574  IALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLD 633

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGG 1194
             D NINKKEL+LVVAS+YERAN+LN+AS IM R+   G
Sbjct: 634  SDPNINKKELHLVVASIYERANRLNDASQIMNRMRERG 671



 Score =  119 bits (298), Expect = 4e-24
 Identities = 79/382 (20%), Positives = 176/382 (46%), Gaps = 4/382 (1%)
 Frame = +1

Query: 46   AGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKE 225
            A   P   +Y+ ++   +  +++  A  +F EM +     D  T + +I  +G+  M   
Sbjct: 149  ASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDS 208

Query: 226  ADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIK 405
            A      M +  +  ++V Y+ L+++  +   + +AI +F  ++R  I  ++V YN+MI 
Sbjct: 209  ALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMIN 268

Query: 406  IYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEI 585
            ++GK     +A  L+ EM++ G+ P+ ++YST++S++ + GK   A  +F ++    C +
Sbjct: 269  VFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPL 328

Query: 586  DQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVF 753
            D      MI  Y +  +   A RL   +++    P  +   T + +   A    EA  +F
Sbjct: 329  DLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLF 388

Query: 754  RQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKL 933
            R        +++  Y  M+++Y ++        + + M+  G  P++   S +++ + K 
Sbjct: 389  RLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKA 448

Query: 934  QEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELY 1113
             + ++A  L+ +++  G      ++  M+  Y         + L   L    NI ++   
Sbjct: 449  GKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAI 508

Query: 1114 LVVASLYERANKLNEASLIMKR 1179
             ++A     A ++ EA+ + ++
Sbjct: 509  TILAG----AGRIEEATWVFRQ 526



 Score =  118 bits (295), Expect = 8e-24
 Identities = 79/325 (24%), Positives = 159/325 (48%), Gaps = 5/325 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN +++    A+ +  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 142  LDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFG 201

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+ SG   D V
Sbjct: 202  KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLV 261

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  + +A L   A+ LL E++     PD +   T +++    G+  EA  VF + 
Sbjct: 262  AYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEM 321

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
            ++     D+     M+++Y +         +F  MRK G  P     + +L  YG+ + F
Sbjct: 322  NEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELF 381

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKEL-YLV 1119
             +A  L+  MQ +    +   +  M+ +YG   + +K  +L + +  +  I    + Y  
Sbjct: 382  GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQ-NRGIEPNAITYST 440

Query: 1120 VASLYERANKLNEASLIMKRLSMGG 1194
            + S++++A KL+ A+++ ++L   G
Sbjct: 441  IISIWDKAGKLDRAAMLFQKLRSSG 465


>gb|EOY03346.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 672

 Score =  666 bits (1719), Expect = 0.0
 Identities = 332/398 (83%), Positives = 367/398 (92%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLL+KEMR  GV+PDTVSYST+L+MYV+N KFVEAL+VF EMNE+KC LDLTTC
Sbjct: 271  KLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVEALSVFAEMNEVKCPLDLTTC 330

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDMAKEAD LFW MRKMGIEPNVVSYNTLLKVYGEAEL+GEAIHLFRLM R
Sbjct: 331  NIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMHR 390

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KDI QNVVTYNTMIKIYGK+LEHEKA NL+QEMQ+RGIEPNAITYSTIISIWGK GKLDR
Sbjct: 391  KDIEQNVVTYNTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLDR 450

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AAMLFQKLRSSG EIDQVLYQTMIVAYERAGLVAHAKRLLHELK+PDN+PR+TAI ILAR
Sbjct: 451  AAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNLPRDTAIMILAR 510

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DAGE+KDI+V+  M++L++RNK+  NVIEVFE+MR AGYFPDSN+
Sbjct: 511  AGRIEEATWVFRQACDAGEVKDISVFGLMIDLFSRNKKHANVIEVFEKMRSAGYFPDSNV 570

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNAYGKL+EF+KADA+Y EMQEEGCVF DEVHFQMLSL G RKDFK VESLFE+LD
Sbjct: 571  IALVLNAYGKLREFDKADAVYKEMQEEGCVFPDEVHFQMLSLCGARKDFKMVESLFEKLD 630

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGG 1194
             D NINKKEL+LVVAS+YER N+LN+AS IM R+S  G
Sbjct: 631  SDPNINKKELHLVVASIYERGNRLNDASQIMNRMSERG 668



 Score =  126 bits (316), Expect = 3e-26
 Identities = 80/383 (20%), Positives = 179/383 (46%), Gaps = 4/383 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+ ++   V  +++  A  +F EM E     D  T + +I  +G+  M   A   
Sbjct: 150  PSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRFTYSTLITYFGKEGMFDSALSW 209

Query: 238  FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYGK 417
               M   G+  ++V ++ L+++  +   + +AI +F  ++R  I+ ++V YN+MI ++GK
Sbjct: 210  LQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKLKRSGIVPDLVCYNSMINVFGK 269

Query: 418  TLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVL 597
                 +A  L++EM+  G+ P+ ++YST+++++ +  K   A  +F ++    C +D   
Sbjct: 270  AKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVEALSVFAEMNEVKCPLDLTT 329

Query: 598  YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQAS 765
               MI  Y +  +   A RL   +++    P+ +   T + +   A    EA  +FR   
Sbjct: 330  CNIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMH 389

Query: 766  DAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEFE 945
                 +++  Y  M+++Y ++        + + M+  G  P++   S +++ +GK  + +
Sbjct: 390  RKDIEQNVVTYNTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLD 449

Query: 946  KADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVVA 1125
            +A  L+ +++  G      ++  M+  Y         + L   L    N+ +    +++A
Sbjct: 450  RAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNLPRDTAIMILA 509

Query: 1126 SLYERANKLNEASLIMKRLSMGG 1194
                RA ++ EA+ + ++    G
Sbjct: 510  ----RAGRIEEATWVFRQACDAG 528



 Score =  114 bits (285), Expect = 1e-22
 Identities = 76/325 (23%), Positives = 158/325 (48%), Gaps = 5/325 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P++ +YN +++   +A+ +  A  LF  M+ K +  +  TY+T+I  +G
Sbjct: 139  LDWVNEEARYSPSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRFTYSTLITYFG 198

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M++ G+  + + +S +I +  K+    +A  +F KL+ SG   D V
Sbjct: 199  KEGMFDSALSWLQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKLKRSGIVPDLV 258

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  + +A L   A+ L+ E++     PD +   T + +     +  EA  VF + 
Sbjct: 259  CYNSMINVFGKAKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVEALSVFAEM 318

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
            ++     D+     M+++Y +         +F  MRK G  P+    + +L  YG+ + +
Sbjct: 319  NEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELY 378

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKEL-YLV 1119
             +A  L+  M  +    +   +  M+ +YG   + +K  +L + +  +  I    + Y  
Sbjct: 379  GEAIHLFRLMHRKDIEQNVVTYNTMIKIYGKSLEHEKAYNLVQEMQ-NRGIEPNAITYST 437

Query: 1120 VASLYERANKLNEASLIMKRLSMGG 1194
            + S++ +A KL+ A+++ ++L   G
Sbjct: 438  IISIWGKAGKLDRAAMLFQKLRSSG 462


>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Solanum tuberosum]
          Length = 668

 Score =  666 bits (1718), Expect = 0.0
 Identities = 329/398 (82%), Positives = 371/398 (93%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+A+LL+KEMR  GV+PDTVSYSTLL+MYV+NQKF+EAL+VF+EMNE+KC LDLTTC
Sbjct: 269  KLFREAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCSLDLTTC 328

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDMAKEAD LFWSMRKMGIEPNVVSYNTLL+VYGEAELFGEAIHLFRLMQR
Sbjct: 329  NIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQR 388

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            K I QNVVTYNTMIKIYGKTLEHEKANNLIQEMQ+ GIEPNAITYSTIISIWGKVGKLDR
Sbjct: 389  KSIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWGKVGKLDR 448

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AAMLFQKLRSSG EIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAI ILA 
Sbjct: 449  AAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMILAG 508

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            +GRIEEATWVFRQA DAGE+KDIAV+ECM+ELY+RN++ TN+IEVFE+MR  GYFP+SN+
Sbjct: 509  SGRIEEATWVFRQAFDAGELKDIAVFECMIELYSRNRKYTNLIEVFEKMRGTGYFPNSNV 568

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNAYGKLQEFEKAD +Y EM EEGCVFSDEVHFQMLSLYG R++++ VE+L++ LD
Sbjct: 569  IALVLNAYGKLQEFEKADMVYKEMHEEGCVFSDEVHFQMLSLYGARRNYEMVETLYKMLD 628

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGG 1194
             D N+NKKEL+LVVA +YE+AN++N+AS I+ R++  G
Sbjct: 629  SDPNVNKKELHLVVAGIYEKANRVNDASRIVNRMTYRG 666



 Score =  119 bits (298), Expect = 4e-24
 Identities = 78/378 (20%), Positives = 176/378 (46%), Gaps = 4/378 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+  L   +  +++  A  +F EM +     D  T + +I  +G+  +  +A   
Sbjct: 148  PSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTYSTLITYFGKEGLFDDALSW 207

Query: 238  FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYGK 417
               M +  +  ++V Y  L+++  +   + +AI +F  ++   I  ++V YNTMI ++GK
Sbjct: 208  LQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKTSGITPDLVAYNTMINVFGK 267

Query: 418  TLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVL 597
                 +A  LI+EM+S G+ P+ ++YST+++++ +  K   A  +F ++    C +D   
Sbjct: 268  AKLFREAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCSLDLTT 327

Query: 598  YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQAS 765
               MI  Y +  +   A RL   +++    P+ +   T + +   A    EA  +FR   
Sbjct: 328  CNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQ 387

Query: 766  DAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEFE 945
                 +++  Y  M+++Y +         + + M+  G  P++   S +++ +GK+ + +
Sbjct: 388  RKSIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWGKVGKLD 447

Query: 946  KADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVVA 1125
            +A  L+ +++  G      ++  M+  Y         + L   L    NI ++   +++A
Sbjct: 448  RAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMILA 507

Query: 1126 SLYERANKLNEASLIMKR 1179
                 + ++ EA+ + ++
Sbjct: 508  G----SGRIEEATWVFRQ 521


>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Solanum lycopersicum]
          Length = 665

 Score =  665 bits (1715), Expect = 0.0
 Identities = 329/398 (82%), Positives = 373/398 (93%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+A+LL+KEMR  GV+PDTVSYSTLL+MYV+NQKF+EAL+VF+EMNE+KC LDLTTC
Sbjct: 266  KLFREAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCPLDLTTC 325

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDMAKEAD LFWSMRKMGIEPNVVSYNTLL+VYGEAELFGEAIHLFRLMQR
Sbjct: 326  NIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQR 385

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            K+I QNVVTYNTMIKIYGKTLEHEKANNLIQEMQ+ GIEPNAITYSTIISIW KVGKLDR
Sbjct: 386  KNIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWAKVGKLDR 445

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AAMLFQKLRSSG EIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILA 
Sbjct: 446  AAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAG 505

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            +GRIEEATWVFRQA DAGE+KDIAV+ECM+ELY+RN++ TN+IEVFE+M  AGYFP+SN+
Sbjct: 506  SGRIEEATWVFRQAFDAGELKDIAVFECMIELYSRNRKYTNLIEVFEKMSGAGYFPNSNV 565

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNAYGKLQEFEKAD +Y EM EEGCVFSDEVHFQMLSLYG R++++ VE+L++ LD
Sbjct: 566  IALVLNAYGKLQEFEKADMVYKEMHEEGCVFSDEVHFQMLSLYGARRNYEMVETLYKVLD 625

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGG 1194
             D N+NKKEL+LVVA++YE+AN++N+AS I+ R++  G
Sbjct: 626  SDPNVNKKELHLVVAAIYEKANRMNDASRIINRMTYRG 663



 Score =  115 bits (287), Expect = 7e-23
 Identities = 76/378 (20%), Positives = 174/378 (46%), Gaps = 4/378 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+  L   +  +++  A  +F EM +     D  T + +I  +G+  +  +A   
Sbjct: 145  PSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTYSTLITYFGKEGLFDDALSW 204

Query: 238  FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYGK 417
               M +  +  ++V Y  L+++  +   + +AI +F  ++   I  ++V YNTMI ++GK
Sbjct: 205  LQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKTSGITPDLVAYNTMINVFGK 264

Query: 418  TLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVL 597
                 +A  L++EM+S G+ P+ ++YST+++++ +  K   A  +F ++    C +D   
Sbjct: 265  AKLFREAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCPLDLTT 324

Query: 598  YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQAS 765
               MI  Y +  +   A RL   +++    P+ +   T + +   A    EA  +FR   
Sbjct: 325  CNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQ 384

Query: 766  DAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEFE 945
                 +++  Y  M+++Y +         + + M+  G  P++   S +++ + K+ + +
Sbjct: 385  RKNIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWAKVGKLD 444

Query: 946  KADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVVA 1125
            +A  L+ +++  G      ++  M+  Y         + L   L    NI ++    ++A
Sbjct: 445  RAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILA 504

Query: 1126 SLYERANKLNEASLIMKR 1179
                 + ++ EA+ + ++
Sbjct: 505  G----SGRIEEATWVFRQ 518


>gb|EMJ16220.1| hypothetical protein PRUPE_ppa003340mg [Prunus persica]
          Length = 584

 Score =  664 bits (1712), Expect = 0.0
 Identities = 329/398 (82%), Positives = 368/398 (92%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLLLKEMR  GV+PDTVSYSTLLSMY++NQKFVEAL+VF+EMNE+KC LDLTTC
Sbjct: 183  KLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEMNEVKCPLDLTTC 242

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDMAKEAD LFWSMRKMG+EPNVVSYNTLL+VYG+AELFGEAIHLFRLMQR
Sbjct: 243  NIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR 302

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
             DI QNVVTYNTMIKIYGK+LEHEKA NL+QEMQ+ GI+PNA+TYSTIISIWGK GKLDR
Sbjct: 303  MDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAGKLDR 362

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AAMLFQKLRSSG EIDQVLYQTMIVAYER GLVAHAKRLLHELKRPDNIPRETAITILA 
Sbjct: 363  AAMLFQKLRSSGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRETAITILAG 422

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DAGE+KDI+V+ CM++L++RN++  N IEVFE+MR AGYFP SN+
Sbjct: 423  AGRIEEATWVFRQAFDAGEVKDISVFGCMIDLFSRNRKYANCIEVFEKMRVAGYFPASNV 482

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I LVLNA+GKL+EFEKADALY EMQEEGCVFSDEVHFQML+LYG RKDFK VE+LF+RL 
Sbjct: 483  IDLVLNAFGKLREFEKADALYREMQEEGCVFSDEVHFQMLTLYGARKDFKMVEALFKRLM 542

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGG 1194
             D NINKKEL+LVVAS+YER+N+LN+AS IM +++  G
Sbjct: 543  CDPNINKKELHLVVASIYERSNRLNDASRIMNKMNERG 580



 Score =  120 bits (301), Expect = 2e-24
 Identities = 78/378 (20%), Positives = 179/378 (47%), Gaps = 4/378 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+ ++   +  +++  A  +F EM +     D  T + +I  +G+  M   A   
Sbjct: 62   PSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFGKAGMFDSALSW 121

Query: 238  FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYGK 417
               M +  +  ++V Y+ L+++  +   + +AI +F  ++R  I+ ++V YN+MI ++GK
Sbjct: 122  LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIMPDLVAYNSMINVFGK 181

Query: 418  TLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVL 597
                 +A  L++EM++ G+ P+ ++YST++S++ +  K   A  +F ++    C +D   
Sbjct: 182  AKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEMNEVKCPLDLTT 241

Query: 598  YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQAS 765
               MI  Y +  +   A RL   +++    P+ +   T + +   A    EA  +FR   
Sbjct: 242  CNIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ 301

Query: 766  DAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEFE 945
                 +++  Y  M+++Y ++        + + M+ +G  P++   S +++ +GK  + +
Sbjct: 302  RMDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAGKLD 361

Query: 946  KADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVVA 1125
            +A  L+ +++  G      ++  M+  Y         + L   L    NI ++    ++A
Sbjct: 362  RAAMLFQKLRSSGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRETAITILA 421

Query: 1126 SLYERANKLNEASLIMKR 1179
                 A ++ EA+ + ++
Sbjct: 422  G----AGRIEEATWVFRQ 435



 Score =  109 bits (272), Expect = 4e-21
 Identities = 76/324 (23%), Positives = 152/324 (46%), Gaps = 4/324 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN +++    A+ +  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 51   LDWINEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFG 110

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+  G   D V
Sbjct: 111  KAGMFDSALSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIMPDLV 170

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  + +A L   A+ LL E++     PD +   T +++     +  EA  VF + 
Sbjct: 171  AYNSMINVFGKAKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEM 230

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
            ++     D+     M+++Y +         +F  MRK G  P+    + +L  YG  + F
Sbjct: 231  NEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELF 290

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVV 1122
             +A  L+  MQ      +   +  M+ +YG   + +K  +L + +           Y  +
Sbjct: 291  GEAIHLFRLMQRMDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTI 350

Query: 1123 ASLYERANKLNEASLIMKRLSMGG 1194
             S++ +A KL+ A+++ ++L   G
Sbjct: 351  ISIWGKAGKLDRAAMLFQKLRSSG 374


>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  661 bits (1706), Expect = 0.0
 Identities = 331/401 (82%), Positives = 364/401 (90%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            +LFR+AR+L+ EMR  GV+PDTVSYSTLLS+YV+N+KFVEAL+VF EMNE  C LDL TC
Sbjct: 253  RLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTC 312

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDM KEAD LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR
Sbjct: 313  NIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 372

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            K+I QNVVTYNTMIKIYGK+LEHEKA NL+QEMQ RGIEPNAITYSTIISIWGK GKLDR
Sbjct: 373  KEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDR 432

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AAMLFQKLRSSG EIDQVLYQTMIVAYERAGLVAHAKRLLH+LK PD IPR+TAI ILAR
Sbjct: 433  AAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILAR 492

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DAGE+KDI+V+ CM+EL++RNKRP NV+EVFE+MR AGYFPDS++
Sbjct: 493  AGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDV 552

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNAYGKL+EFEKADA+Y EMQEE CVF DEVHFQMLSLYG RKDF  VESLFE+LD
Sbjct: 553  IALVLNAYGKLREFEKADAVYREMQEEECVFPDEVHFQMLSLYGARKDFIMVESLFEKLD 612

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGGTPR 1203
             D NINKKEL+LVVAS+YER N+LN+AS IM R+S  G  R
Sbjct: 613  SDPNINKKELHLVVASIYERQNRLNDASRIMNRMSKEGMLR 653



 Score =  128 bits (321), Expect = 8e-27
 Identities = 79/327 (24%), Positives = 166/327 (50%), Gaps = 6/327 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+ +L   +  +K+  A  +F EM +     D  T + +I  +G+  M  E+  L
Sbjct: 132  PSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDES--L 189

Query: 238  FW--SMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIY 411
            FW   M +  +  ++V Y+ L+++  +   + +AI +F  ++R  I  ++V YN+MI ++
Sbjct: 190  FWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVF 249

Query: 412  GKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQ 591
            GK     +A  L+ EM+  G+ P+ ++YST++S++ +  K   A  +F ++  + C +D 
Sbjct: 250  GKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDL 309

Query: 592  VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQ 759
            +    MI  Y +  +V  A RL   +++    P+ +   T + +   A    EA  +FR 
Sbjct: 310  MTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRL 369

Query: 760  ASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQE 939
                   +++  Y  M+++Y ++        + + M+K G  P++   S +++ +GK  +
Sbjct: 370  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGK 429

Query: 940  FEKADALYSEMQEEGCVFSDEVHFQML 1020
             ++A  L+ +++  G V  D+V +Q +
Sbjct: 430  LDRAAMLFQKLRSSG-VEIDQVLYQTM 455



 Score =  118 bits (296), Expect = 6e-24
 Identities = 88/382 (23%), Positives = 175/382 (45%), Gaps = 5/382 (1%)
 Frame = +1

Query: 64   TVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQ-LDMAKEADGLF 240
            +V    LL      Q  VE  ++ +   E +  +       M+ +  Q  D  +    L 
Sbjct: 68   SVDMKQLLISISQTQNEVELYSLLSPYKERQLSI-----RFMVSLISQEADWQRSLALLD 122

Query: 241  WSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYGKT 420
            W        P+V +YN +L+    A+ +  A  LF  M+++ +  +  TY+T+I  +GK 
Sbjct: 123  WINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKA 182

Query: 421  LEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVLY 600
               +++   +Q+M+   +  + + YS +I +  K+    +A  +F +L+ SG   D V Y
Sbjct: 183  GMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAY 242

Query: 601  QTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQASD 768
             +MI  + +A L   A+ L+HE++     PD +   T +++     +  EA  VF + ++
Sbjct: 243  NSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNE 302

Query: 769  AGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEFEK 948
            A    D+     M+++Y +         +F  MRK G  P+    + +L  YG+ + F +
Sbjct: 303  ANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGE 362

Query: 949  ADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVVAS 1128
            A  L+  MQ +    +   +  M+ +YG   + +K  +L + +           Y  + S
Sbjct: 363  AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIIS 422

Query: 1129 LYERANKLNEASLIMKRLSMGG 1194
            ++ +A KL+ A+++ ++L   G
Sbjct: 423  IWGKAGKLDRAAMLFQKLRSSG 444


>ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citrus clementina]
            gi|557533112|gb|ESR44295.1| hypothetical protein
            CICLE_v10011224mg [Citrus clementina]
          Length = 677

 Score =  653 bits (1685), Expect = 0.0
 Identities = 324/395 (82%), Positives = 364/395 (92%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLF++ARLL++EMR  GV PDTVSYSTLL++YV+N KFVEAL+VF EMNE+ C LDLTTC
Sbjct: 273  KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 332

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDMAK+AD LFWSMRKMGI+P+VVSYNTLL+VYGEAELFGEAIHLFRLMQR
Sbjct: 333  NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 392

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            K+I QNVVTYNTMIKIYGK+LEHEKA NL+QEMQ+RGIEPNAITYSTII+IWGK GKLDR
Sbjct: 393  KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 452

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AAMLFQKLRSSG EID VLYQTMIVAYER GLVAHAKRLLHEL++PD IPRETAITILAR
Sbjct: 453  AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPDTIPRETAITILAR 512

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DAGE+KDI+V+ CM+EL++RNK+  NVIEVFE+MR AGYFPDS+I
Sbjct: 513  AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 572

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLN+YGKL+EFE AD LYSEMQEEGCVFSD+VHFQMLSLYG RKDF  +ESLFERLD
Sbjct: 573  IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 632

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLS 1185
             D NINKKEL+ VVA +YERAN+LN+AS IM R++
Sbjct: 633  SDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 667



 Score =  122 bits (307), Expect = 3e-25
 Identities = 79/378 (20%), Positives = 177/378 (46%), Gaps = 4/378 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+ +L   +  +++  A  +F EM +     D  T + +I  +G+  M   A   
Sbjct: 152  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 211

Query: 238  FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYGK 417
               M +  +  ++V Y+ L+++  +   + +AI +F  ++   I+ ++V YNTMI ++GK
Sbjct: 212  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 271

Query: 418  TLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVL 597
                ++A  LI+EM+ +G++P+ ++YST+++++ +  K   A  +F ++    C +D   
Sbjct: 272  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 331

Query: 598  YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQAS 765
               MI  Y +  +   A RL   +++    P  +   T + +   A    EA  +FR   
Sbjct: 332  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 391

Query: 766  DAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEFE 945
                 +++  Y  M+++Y ++        + + M+  G  P++   S ++  +GK  + +
Sbjct: 392  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 451

Query: 946  KADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVVA 1125
            +A  L+ +++  G      ++  M+  Y         + L   L     I ++    ++A
Sbjct: 452  RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPDTIPRETAITILA 511

Query: 1126 SLYERANKLNEASLIMKR 1179
                RA ++ EA+ + ++
Sbjct: 512  ----RAGRIEEATWVFRQ 525



 Score =  120 bits (302), Expect = 1e-24
 Identities = 80/325 (24%), Positives = 159/325 (48%), Gaps = 5/325 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN +L+    A+ +  A  LF  M+++ I  +  TY+T+I  +G
Sbjct: 141  LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 200

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG   D V
Sbjct: 201  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 260

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILARAGRIEEATWVFRQA 762
             Y TMI  + +A L   A+ L+ E++    +PD +   T + +     +  EA  VF + 
Sbjct: 261  AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 320

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
            ++     D+     M+++Y +     +   +F  MRK G  P     + +L  YG+ + F
Sbjct: 321  NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 380

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKEL-YLV 1119
             +A  L+  MQ +    +   +  M+ +YG   + +K  +L + +  +  I    + Y  
Sbjct: 381  GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ-NRGIEPNAITYST 439

Query: 1120 VASLYERANKLNEASLIMKRLSMGG 1194
            + +++ +A KL+ A+++ ++L   G
Sbjct: 440  IIAIWGKAGKLDRAAMLFQKLRSSG 464



 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 35/252 (13%)
 Frame = +1

Query: 25   LLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYG 204
            L++EM+  G+ P+ ++YST+++++    K   A  +F ++     ++D      MI  Y 
Sbjct: 421  LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 480

Query: 205  QLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVV 384
            ++ +   A  L   +R    +P+ +   T + +   A    EA  +FR       ++++ 
Sbjct: 481  RVGLVAHAKRLLHELR----QPDTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 536

Query: 385  TYNTMIKI-----------------------------------YGKTLEHEKANNLIQEM 459
             +  MI++                                   YGK  E E A++L  EM
Sbjct: 537  VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 596

Query: 460  QSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLV 639
            Q  G   +   +  ++S++G     +    LF++L S      + L+  +   YERA  +
Sbjct: 597  QEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRL 656

Query: 640  AHAKRLLHELKR 675
              A R+++ + +
Sbjct: 657  NDASRIMNRMNK 668


>ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Citrus sinensis]
          Length = 677

 Score =  651 bits (1680), Expect = 0.0
 Identities = 323/395 (81%), Positives = 364/395 (92%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLF++ARLL++EMR  GV PDTVSYSTLL++YV+N KFVEAL+VF EMNE+ C LDLTTC
Sbjct: 273  KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 332

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDMAK+AD LFWSMRKMGI+P+VVSYNTLL+VYGEAELFGEAIHLFRLMQR
Sbjct: 333  NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 392

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            K+I QNVVTYNTMIKIYGK+LEHEKA NL+QEMQ+RGIEPNAITYSTII+IWGK GKLDR
Sbjct: 393  KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 452

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AAMLFQKLRSSG EID VLYQTMIVAYER GLVAHAKRLLHEL++P+ IPRETAITILAR
Sbjct: 453  AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 512

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DAGE+KDI+V+ CM+EL++RNK+  NVIEVFE+MR AGYFPDS+I
Sbjct: 513  AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 572

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLN+YGKL+EFE AD LYSEMQEEGCVFSD+VHFQMLSLYG RKDF  +ESLFERLD
Sbjct: 573  IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 632

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLS 1185
             D NINKKEL+ VVA +YERAN+LN+AS IM R++
Sbjct: 633  SDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 667



 Score =  123 bits (308), Expect = 3e-25
 Identities = 79/378 (20%), Positives = 177/378 (46%), Gaps = 4/378 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+ +L   +  +++  A  +F EM +     D  T + +I  +G+  M   A   
Sbjct: 152  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 211

Query: 238  FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYGK 417
               M +  +  ++V Y+ L+++  +   + +AI +F  ++   I+ ++V YNTMI ++GK
Sbjct: 212  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 271

Query: 418  TLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVL 597
                ++A  LI+EM+ +G++P+ ++YST+++++ +  K   A  +F ++    C +D   
Sbjct: 272  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 331

Query: 598  YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQAS 765
               MI  Y +  +   A RL   +++    P  +   T + +   A    EA  +FR   
Sbjct: 332  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 391

Query: 766  DAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEFE 945
                 +++  Y  M+++Y ++        + + M+  G  P++   S ++  +GK  + +
Sbjct: 392  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 451

Query: 946  KADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVVA 1125
            +A  L+ +++  G      ++  M+  Y         + L   L     I ++    ++A
Sbjct: 452  RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 511

Query: 1126 SLYERANKLNEASLIMKR 1179
                RA ++ EA+ + ++
Sbjct: 512  ----RAGRIEEATWVFRQ 525



 Score =  120 bits (302), Expect = 1e-24
 Identities = 80/325 (24%), Positives = 159/325 (48%), Gaps = 5/325 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN +L+    A+ +  A  LF  M+++ I  +  TY+T+I  +G
Sbjct: 141  LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 200

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG   D V
Sbjct: 201  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 260

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILARAGRIEEATWVFRQA 762
             Y TMI  + +A L   A+ L+ E++    +PD +   T + +     +  EA  VF + 
Sbjct: 261  AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 320

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
            ++     D+     M+++Y +     +   +F  MRK G  P     + +L  YG+ + F
Sbjct: 321  NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 380

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKEL-YLV 1119
             +A  L+  MQ +    +   +  M+ +YG   + +K  +L + +  +  I    + Y  
Sbjct: 381  GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ-NRGIEPNAITYST 439

Query: 1120 VASLYERANKLNEASLIMKRLSMGG 1194
            + +++ +A KL+ A+++ ++L   G
Sbjct: 440  IIAIWGKAGKLDRAAMLFQKLRSSG 464


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g39980, chloroplastic; Flags: Precursor
            gi|10176990|dbj|BAB10222.1| unnamed protein product
            [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 678

 Score =  645 bits (1663), Expect = 0.0
 Identities = 318/402 (79%), Positives = 360/402 (89%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLL+KEM  AGV+P+TVSYSTLLS+YV+N KF+EAL+VF EM E+ C LDLTTC
Sbjct: 274  KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTC 333

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDM KEAD LFWS+RKM IEPNVVSYNT+L+VYGEAELFGEAIHLFRLMQR
Sbjct: 334  NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KDI QNVVTYNTMIKIYGKT+EHEKA NL+QEMQSRGIEPNAITYSTIISIWGK GKLDR
Sbjct: 394  KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AA LFQKLRSSG EIDQVLYQTMIVAYER GL+ HAKRLLHELK PDNIPRETAITILA+
Sbjct: 454  AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 513

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGR EEATWVFRQA ++GE+KDI+V+ CM+ LY+RN+R  NVIEVFE+MR AGYFPDSN+
Sbjct: 514  AGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNV 573

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I++VLNAYGK +EFEKAD +Y EMQEEGCVF DEVHFQMLSLY  +KDF+ VESLF+RL+
Sbjct: 574  IAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLE 633

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGGTPRP 1206
             D N+N KEL+LVVA+LYERA+KLN+AS +M R+   G  +P
Sbjct: 634  SDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 675



 Score =  132 bits (332), Expect = 4e-28
 Identities = 88/387 (22%), Positives = 178/387 (45%), Gaps = 4/387 (1%)
 Frame = +1

Query: 46   AGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKE 225
            A   P   +Y+ +L   +  ++F  A  +F EM +     D  T + +I  +G+  M   
Sbjct: 149  AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 208

Query: 226  ADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIK 405
            A      M +  +  ++V Y+ L+++      + +AI +F  ++R  I  ++V YN+MI 
Sbjct: 209  ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268

Query: 406  IYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEI 585
            +YGK     +A  LI+EM   G+ PN ++YST++S++ +  K   A  +F +++   C +
Sbjct: 269  VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328

Query: 586  DQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVF 753
            D      MI  Y +  +V  A RL   L++    P+ +   T + +   A    EA  +F
Sbjct: 329  DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388

Query: 754  RQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKL 933
            R        +++  Y  M+++Y +         + + M+  G  P++   S +++ +GK 
Sbjct: 389  RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448

Query: 934  QEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELY 1113
             + ++A  L+ +++  G      ++  M+  Y         + L   L L  NI ++   
Sbjct: 449  GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 508

Query: 1114 LVVASLYERANKLNEASLIMKRLSMGG 1194
             ++A    +A +  EA+ + ++    G
Sbjct: 509  TILA----KAGRTEEATWVFRQAFESG 531



 Score =  110 bits (276), Expect = 1e-21
 Identities = 75/324 (23%), Positives = 151/324 (46%), Gaps = 4/324 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN +L+    A+ F  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 142  LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 201

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  ++    +A  +F +L+ SG   D V
Sbjct: 202  KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLV 261

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  Y +A L   A+ L+ E+      P+ +   T +++     +  EA  VF + 
Sbjct: 262  AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM 321

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
             +     D+     M+++Y +         +F  +RK    P+    + +L  YG+ + F
Sbjct: 322  KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELF 381

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVV 1122
             +A  L+  MQ +    +   +  M+ +YG   + +K  +L + +           Y  +
Sbjct: 382  GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTI 441

Query: 1123 ASLYERANKLNEASLIMKRLSMGG 1194
             S++ +A KL+ A+ + ++L   G
Sbjct: 442  ISIWGKAGKLDRAATLFQKLRSSG 465


>dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
          Length = 546

 Score =  645 bits (1663), Expect = 0.0
 Identities = 318/402 (79%), Positives = 360/402 (89%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLL+KEM  AGV+P+TVSYSTLLS+YV+N KF+EAL+VF EM E+ C LDLTTC
Sbjct: 142  KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTC 201

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDM KEAD LFWS+RKM IEPNVVSYNT+L+VYGEAELFGEAIHLFRLMQR
Sbjct: 202  NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 261

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KDI QNVVTYNTMIKIYGKT+EHEKA NL+QEMQSRGIEPNAITYSTIISIWGK GKLDR
Sbjct: 262  KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 321

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AA LFQKLRSSG EIDQVLYQTMIVAYER GL+ HAKRLLHELK PDNIPRETAITILA+
Sbjct: 322  AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 381

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGR EEATWVFRQA ++GE+KDI+V+ CM+ LY+RN+R  NVIEVFE+MR AGYFPDSN+
Sbjct: 382  AGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNV 441

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I++VLNAYGK +EFEKAD +Y EMQEEGCVF DEVHFQMLSLY  +KDF+ VESLF+RL+
Sbjct: 442  IAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLE 501

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGGTPRP 1206
             D N+N KEL+LVVA+LYERA+KLN+AS +M R+   G  +P
Sbjct: 502  SDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 543



 Score =  132 bits (332), Expect = 4e-28
 Identities = 88/387 (22%), Positives = 178/387 (45%), Gaps = 4/387 (1%)
 Frame = +1

Query: 46   AGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKE 225
            A   P   +Y+ +L   +  ++F  A  +F EM +     D  T + +I  +G+  M   
Sbjct: 17   AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 76

Query: 226  ADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIK 405
            A      M +  +  ++V Y+ L+++      + +AI +F  ++R  I  ++V YN+MI 
Sbjct: 77   ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 136

Query: 406  IYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEI 585
            +YGK     +A  LI+EM   G+ PN ++YST++S++ +  K   A  +F +++   C +
Sbjct: 137  VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 196

Query: 586  DQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVF 753
            D      MI  Y +  +V  A RL   L++    P+ +   T + +   A    EA  +F
Sbjct: 197  DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 256

Query: 754  RQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKL 933
            R        +++  Y  M+++Y +         + + M+  G  P++   S +++ +GK 
Sbjct: 257  RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 316

Query: 934  QEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELY 1113
             + ++A  L+ +++  G      ++  M+  Y         + L   L L  NI ++   
Sbjct: 317  GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 376

Query: 1114 LVVASLYERANKLNEASLIMKRLSMGG 1194
             ++A    +A +  EA+ + ++    G
Sbjct: 377  TILA----KAGRTEEATWVFRQAFESG 399



 Score =  110 bits (276), Expect = 1e-21
 Identities = 75/324 (23%), Positives = 151/324 (46%), Gaps = 4/324 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN +L+    A+ F  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 10   LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 69

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  ++    +A  +F +L+ SG   D V
Sbjct: 70   KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLV 129

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  Y +A L   A+ L+ E+      P+ +   T +++     +  EA  VF + 
Sbjct: 130  AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM 189

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
             +     D+     M+++Y +         +F  +RK    P+    + +L  YG+ + F
Sbjct: 190  KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELF 249

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVV 1122
             +A  L+  MQ +    +   +  M+ +YG   + +K  +L + +           Y  +
Sbjct: 250  GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTI 309

Query: 1123 ASLYERANKLNEASLIMKRLSMGG 1194
             S++ +A KL+ A+ + ++L   G
Sbjct: 310  ISIWGKAGKLDRAATLFQKLRSSG 333


>ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 672

 Score =  644 bits (1660), Expect = 0.0
 Identities = 315/395 (79%), Positives = 360/395 (91%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+AR LLKEMR  GV PDTVSYSTLL+MYV+N+KF+EAL VF EM+E+KC LD+TTC
Sbjct: 271  KLFREARGLLKEMRAVGVAPDTVSYSTLLTMYVENEKFLEALGVFREMSEVKCGLDITTC 330

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            N+MIDVYGQLDMAKEAD LFWSMRKM IEPNVVSYNTLL+VYG+AELFGEAIHLFR+MQR
Sbjct: 331  NVMIDVYGQLDMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGDAELFGEAIHLFRMMQR 390

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
             D+ QNVVTYNTMI+IYGK+LEHEKA NL+QEMQ RGI+PNAITYSTIISIWG+ GKLDR
Sbjct: 391  MDVEQNVVTYNTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAITYSTIISIWGRAGKLDR 450

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AAMLFQKLR+SG EIDQVLYQTMIV+YER GLVAHAKRLLHELKRPDNIPRETAITILAR
Sbjct: 451  AAMLFQKLRNSGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELKRPDNIPRETAITILAR 510

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGR+EEATWVFRQA +AG++KDI+V+ CM+ELY+RN++  N IEVFE MR AGYFP S++
Sbjct: 511  AGRVEEATWVFRQAFEAGQVKDISVFGCMIELYSRNRKYANCIEVFENMRVAGYFPASHV 570

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I LVLNAYGKL+EFEKADA+Y EMQEEGCVFSDE+HFQMLSLYG RKDFK VE++FERL 
Sbjct: 571  IGLVLNAYGKLREFEKADAVYREMQEEGCVFSDEIHFQMLSLYGARKDFKTVEAMFERLV 630

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLS 1185
             D NINKKEL+LVVA +YER+N+LN++  IM R++
Sbjct: 631  CDPNINKKELHLVVAGIYERSNRLNDSHRIMNRMN 665



 Score =  118 bits (295), Expect = 8e-24
 Identities = 79/383 (20%), Positives = 179/383 (46%), Gaps = 4/383 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+ +L   +   ++  A  +F EM       D  T + +I  +G+  M   A   
Sbjct: 150  PSVFAYNVVLRNVLRAGQWDLAHGLFDEMRHRALAPDRYTYSTLITAFGKAGMFDAALSW 209

Query: 238  FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYGK 417
               M +  +  ++V Y+ L+++  +   + +AI +F  ++R  I+ ++V +N+MI ++GK
Sbjct: 210  LQKMEQDRVSGDLVLYSNLIELSRKLCDYTKAIAIFSRLKRMGIVPDLVAFNSMINVFGK 269

Query: 418  TLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVL 597
                 +A  L++EM++ G+ P+ ++YST+++++ +  K   A  +F+++    C +D   
Sbjct: 270  AKLFREARGLLKEMRAVGVAPDTVSYSTLLTMYVENEKFLEALGVFREMSEVKCGLDITT 329

Query: 598  YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQAS 765
               MI  Y +  +   A RL   +++    P+ +   T + +   A    EA  +FR   
Sbjct: 330  CNVMIDVYGQLDMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGDAELFGEAIHLFRMMQ 389

Query: 766  DAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEFE 945
                 +++  Y  M+ +Y ++        + + M+K G  P++   S +++ +G+  + +
Sbjct: 390  RMDVEQNVVTYNTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAITYSTIISIWGRAGKLD 449

Query: 946  KADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVVA 1125
            +A  L+ +++  G      ++  M+  Y         + L   L    NI ++    ++A
Sbjct: 450  RAAMLFQKLRNSGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELKRPDNIPRETAITILA 509

Query: 1126 SLYERANKLNEASLIMKRLSMGG 1194
                RA ++ EA+ + ++    G
Sbjct: 510  ----RAGRVEEATWVFRQAFEAG 528


>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Cucumis sativus]
            gi|449530101|ref|XP_004172035.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  641 bits (1653), Expect = 0.0
 Identities = 312/395 (78%), Positives = 361/395 (91%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+AR LLKEMR   V+PDTVSYSTLL+M+V+N+KF+EAL+V +EM E+ C LDLTTC
Sbjct: 278  KLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTC 337

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDM KEAD LFW MRK+GIEPNVVSYNT+L+VYGEAELFGEAIHLFRLMQR
Sbjct: 338  NIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 397

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            K+I QNVVTYNTMIKIYGKTLEHEKA NL+Q+MQ RGIEPNAITYSTIISIWGK GKLDR
Sbjct: 398  KEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDR 457

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            +AMLFQKLRSSG EIDQVLYQTMIVAYE+AGLV HAKRLLHELK+PDNIPR TAITILA+
Sbjct: 458  SAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAK 517

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DAGE+KDI+V+ECM++L++RNK+  NV+EVFE+MR  G+FP+S++
Sbjct: 518  AGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDV 577

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNAYGKL++F+ ADALY EMQEEGCVF+DEVHFQMLSLYG R D+K++ESLFERLD
Sbjct: 578  IALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERLD 637

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLS 1185
             D NINKKEL+LVVAS+YER N+  +AS I+ R++
Sbjct: 638  SDPNINKKELHLVVASIYERGNRSKDASRIINRMN 672



 Score =  119 bits (299), Expect = 3e-24
 Identities = 78/378 (20%), Positives = 177/378 (46%), Gaps = 4/378 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+ +L   +  +++  A  +F EM +     D  T + +I  +G+  M   A   
Sbjct: 157  PSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSW 216

Query: 238  FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYGK 417
               M +  +  ++V Y+ L+++  +   + +AI +F  ++R  I  ++V YNTMI ++GK
Sbjct: 217  LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGK 276

Query: 418  TLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQVL 597
                 +A  L++EM++  + P+ ++YST+++++ +  K   A  +  +++   C +D   
Sbjct: 277  AKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTT 336

Query: 598  YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQAS 765
               MI  Y +  +V  A RL   +++    P+ +   T + +   A    EA  +FR   
Sbjct: 337  CNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 396

Query: 766  DAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEFE 945
                 +++  Y  M+++Y +         + + M+K G  P++   S +++ +GK  + +
Sbjct: 397  RKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLD 456

Query: 946  KADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVVA 1125
            ++  L+ +++  G      ++  M+  Y         + L   L    NI +     ++A
Sbjct: 457  RSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILA 516

Query: 1126 SLYERANKLNEASLIMKR 1179
                +A ++ EA+ + ++
Sbjct: 517  ----KAGRIEEATWVFRQ 530



 Score =  112 bits (279), Expect = 6e-22
 Identities = 78/324 (24%), Positives = 153/324 (47%), Gaps = 4/324 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN +L+    A+ +  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 146  LDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFG 205

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+ SG   D V
Sbjct: 206  KEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIV 265

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILARAGRIEEATWVFRQA 762
             Y TMI  + +A L   A+ LL E++     PD +   T + +     +  EA  V  + 
Sbjct: 266  AYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEM 325

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
             +     D+     M+++Y +         +F RMRK G  P+    + +L  YG+ + F
Sbjct: 326  KEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELF 385

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVV 1122
             +A  L+  MQ +    +   +  M+ +YG   + +K  +L + +           Y  +
Sbjct: 386  GEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTI 445

Query: 1123 ASLYERANKLNEASLIMKRLSMGG 1194
             S++ +A KL+ ++++ ++L   G
Sbjct: 446  ISIWGKAGKLDRSAMLFQKLRSSG 469


>ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Capsella rubella]
            gi|482554761|gb|EOA18954.1| hypothetical protein
            CARUB_v10007588mg [Capsella rubella]
          Length = 679

 Score =  640 bits (1652), Expect = 0.0
 Identities = 316/402 (78%), Positives = 360/402 (89%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLL+KEM  AGV+P+TVSYSTLLS+YV+NQKF+EAL+VF EM E+ C LDLTTC
Sbjct: 276  KLFREARLLIKEMTEAGVLPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTC 335

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDM KEAD LFWS+RKM IEPNVVSYNT+L+VYGEAELFGEAIHLFRLMQR
Sbjct: 336  NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 395

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KDI QNVVTYNTMIKIYGKT+EHEKA NL++EMQSRGIEPNAITYSTIISIWGK GKLDR
Sbjct: 396  KDIEQNVVTYNTMIKIYGKTMEHEKATNLVREMQSRGIEPNAITYSTIISIWGKAGKLDR 455

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AA LFQKLRSSG EIDQVLYQTMIVAYER GL+ HAKRLLHELK PDNIPRETAITILA+
Sbjct: 456  AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 515

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGR EEATWVFRQA ++GE+KDI+V+ CM+ LY+RN+R  NVIEVFE+MR AGYFPDSN 
Sbjct: 516  AGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNA 575

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I++VLNAYGK +EFEKAD +Y EMQEEGCVF DEVHFQMLSLY  +KDF+ VE+LF+RL+
Sbjct: 576  IAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVETLFQRLE 635

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGGTPRP 1206
             + N+N KEL+LVVA+LYERA+KLN+AS +M R+   G  +P
Sbjct: 636  SEPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 677



 Score =  130 bits (326), Expect = 2e-27
 Identities = 87/387 (22%), Positives = 177/387 (45%), Gaps = 4/387 (1%)
 Frame = +1

Query: 46   AGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKE 225
            A   P   +Y+ +L   +  ++F  A  +F EM +     D  T + +I  +G+  M   
Sbjct: 151  AKYTPSVYAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 210

Query: 226  ADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIK 405
            A      M +  +  ++V Y+ L+++      + +AI +F  +++  I  ++V YN+MI 
Sbjct: 211  ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLVAYNSMIN 270

Query: 406  IYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEI 585
            +YGK     +A  LI+EM   G+ PN ++YST++S++ +  K   A  +F +++   C +
Sbjct: 271  VYGKAKLFREARLLIKEMTEAGVLPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPL 330

Query: 586  DQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVF 753
            D      MI  Y +  +V  A RL   L++    P+ +   T + +   A    EA  +F
Sbjct: 331  DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 390

Query: 754  RQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKL 933
            R        +++  Y  M+++Y +         +   M+  G  P++   S +++ +GK 
Sbjct: 391  RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVREMQSRGIEPNAITYSTIISIWGKA 450

Query: 934  QEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELY 1113
             + ++A  L+ +++  G      ++  M+  Y         + L   L L  NI ++   
Sbjct: 451  GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 510

Query: 1114 LVVASLYERANKLNEASLIMKRLSMGG 1194
             ++A    +A +  EA+ + ++    G
Sbjct: 511  TILA----KAGRTEEATWVFRQAFESG 533



 Score =  109 bits (272), Expect = 4e-21
 Identities = 75/324 (23%), Positives = 150/324 (46%), Gaps = 4/324 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN +L+    A+ F  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 144  LDWVHEEAKYTPSVYAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 203

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  ++    +A  +F +L+ SG   D V
Sbjct: 204  KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLV 263

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  Y +A L   A+ L+ E+      P+ +   T +++     +  EA  VF + 
Sbjct: 264  AYNSMINVYGKAKLFREARLLIKEMTEAGVLPNTVSYSTLLSVYVENQKFLEALSVFAEM 323

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
             +     D+     M+++Y +         +F  +RK    P+    + +L  YG+ + F
Sbjct: 324  KEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELF 383

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVV 1122
             +A  L+  MQ +    +   +  M+ +YG   + +K  +L   +           Y  +
Sbjct: 384  GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVREMQSRGIEPNAITYSTI 443

Query: 1123 ASLYERANKLNEASLIMKRLSMGG 1194
             S++ +A KL+ A+ + ++L   G
Sbjct: 444  ISIWGKAGKLDRAATLFQKLRSSG 467


>ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutrema salsugineum]
            gi|557106704|gb|ESQ47019.1| hypothetical protein
            EUTSA_v10028245mg [Eutrema salsugineum]
          Length = 683

 Score =  640 bits (1650), Expect = 0.0
 Identities = 316/402 (78%), Positives = 358/402 (89%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLL+KEM+ AGV P+TVSYSTLLS+YV+NQKF+EAL+VF EM E+ C LDLTTC
Sbjct: 279  KLFREARLLIKEMKEAGVEPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTC 338

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            N+MIDVYGQLDM KEAD LFWSMRKM IEPNVVSYNT+L+VYGEA+L GEAIHLFRLMQR
Sbjct: 339  NVMIDVYGQLDMVKEADRLFWSMRKMDIEPNVVSYNTILRVYGEADLIGEAIHLFRLMQR 398

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KDI QNVVTYNTMIK+YGKTLEHEKA NL+QEMQSRGIEPNAITYSTIISIWGK GKLDR
Sbjct: 399  KDIEQNVVTYNTMIKMYGKTLEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 458

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AA LFQKLR SG EIDQVLYQTMIVAYER GL+ HAKRLL ELK+PDNIPRETAITILA+
Sbjct: 459  AATLFQKLRRSGVEIDQVLYQTMIVAYERVGLMGHAKRLLQELKQPDNIPRETAITILAK 518

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA ++GE+KDI V+ CM+ LY+RN+R  NVIEVFE+MR AGYFPDSN 
Sbjct: 519  AGRIEEATWVFRQAFESGEVKDITVFGCMISLYSRNQRYVNVIEVFEKMRSAGYFPDSNA 578

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I++VLNAYGK +EFEKAD +Y EMQEEGCVF DEVHFQMLSLY  +KDF+ VESLFERL+
Sbjct: 579  IAIVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLE 638

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGGTPRP 1206
             D N+N KEL+LVVA+LYERA++LN+AS +M R+   G  +P
Sbjct: 639  SDPNVNSKELHLVVAALYERADRLNDASRVMNRMRERGILKP 680



 Score =  135 bits (340), Expect = 5e-29
 Identities = 87/387 (22%), Positives = 182/387 (47%), Gaps = 4/387 (1%)
 Frame = +1

Query: 46   AGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKE 225
            A   P   +Y+ +L   +  ++F  A  +F EM +     D  T + +I  +G+  M   
Sbjct: 154  AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 213

Query: 226  ADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIK 405
            A      M +  +  ++V Y+ L+++      + +AI +F  +++  I  ++V YN+MI 
Sbjct: 214  ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLVAYNSMIN 273

Query: 406  IYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEI 585
            +YGK     +A  LI+EM+  G+EPN ++YST++S++ +  K   A  +F +++   C +
Sbjct: 274  VYGKAKLFREARLLIKEMKEAGVEPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPL 333

Query: 586  DQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVF 753
            D      MI  Y +  +V  A RL   +++    P+ +   T + +   A  I EA  +F
Sbjct: 334  DLTTCNVMIDVYGQLDMVKEADRLFWSMRKMDIEPNVVSYNTILRVYGEADLIGEAIHLF 393

Query: 754  RQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKL 933
            R        +++  Y  M+++Y +         + + M+  G  P++   S +++ +GK 
Sbjct: 394  RLMQRKDIEQNVVTYNTMIKMYGKTLEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 453

Query: 934  QEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELY 1113
             + ++A  L+ +++  G      ++  M+  Y         + L + L    NI ++   
Sbjct: 454  GKLDRAATLFQKLRRSGVEIDQVLYQTMIVAYERVGLMGHAKRLLQELKQPDNIPRETAI 513

Query: 1114 LVVASLYERANKLNEASLIMKRLSMGG 1194
             ++A    +A ++ EA+ + ++    G
Sbjct: 514  TILA----KAGRIEEATWVFRQAFESG 536



 Score =  110 bits (274), Expect = 2e-21
 Identities = 76/324 (23%), Positives = 150/324 (46%), Gaps = 4/324 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN +L+    A+ F  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 147  LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 206

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  ++    +A  +F +L+ SG   D V
Sbjct: 207  KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLV 266

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  Y +A L   A+ L+ E+K     P+ +   T +++     +  EA  VF + 
Sbjct: 267  AYNSMINVYGKAKLFREARLLIKEMKEAGVEPNTVSYSTLLSVYVENQKFLEALSVFAEM 326

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
             +     D+     M+++Y +         +F  MRK    P+    + +L  YG+    
Sbjct: 327  KEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMDIEPNVVSYNTILRVYGEADLI 386

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVV 1122
             +A  L+  MQ +    +   +  M+ +YG   + +K  +L + +           Y  +
Sbjct: 387  GEAIHLFRLMQRKDIEQNVVTYNTMIKMYGKTLEHEKATNLVQEMQSRGIEPNAITYSTI 446

Query: 1123 ASLYERANKLNEASLIMKRLSMGG 1194
             S++ +A KL+ A+ + ++L   G
Sbjct: 447  ISIWGKAGKLDRAATLFQKLRRSG 470


>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297316573|gb|EFH46996.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 680

 Score =  639 bits (1647), Expect = e-180
 Identities = 316/402 (78%), Positives = 357/402 (88%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLF++AR+L+KEM  AGV P+TVSYSTLLS+YV+N KF+EAL+VF EM E+ C LDLTTC
Sbjct: 276  KLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTC 335

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQLDM KEAD LFWS+RKM IEPNVVSYNT+L+VYGEAELFGEAIHLFRLMQR
Sbjct: 336  NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 395

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KDI QNVVTYNTMIKIYGKT+EHEKA NL+QEMQSRGIEPNAITYSTIISIWGK GKLDR
Sbjct: 396  KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 455

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AA LFQKLRSSG EIDQVLYQTMIVAYER GL+ HAKRLLHELK PDNIPRETAITILA+
Sbjct: 456  AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 515

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AG  EEATWVFRQA ++GE+KDI+V+ CM+ LY+RN+R  NVIEVFE+MR AGYFPDSN 
Sbjct: 516  AGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNA 575

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I++VLNAYGK +EFEKAD +Y EMQEEGCVF DEVHFQMLSLY  +KDF+ VESLFERL+
Sbjct: 576  IAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLE 635

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLSMGGTPRP 1206
             D N+N KEL+LVVA+LYERA+KLN+AS +M R+   G  +P
Sbjct: 636  SDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 677



 Score =  133 bits (334), Expect = 2e-28
 Identities = 88/387 (22%), Positives = 178/387 (45%), Gaps = 4/387 (1%)
 Frame = +1

Query: 46   AGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKE 225
            A   P   +Y+ +L   +  ++F  A  +F EM +     D  T + +I  +G+  M   
Sbjct: 151  AKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 210

Query: 226  ADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIK 405
            A      M +  +  ++V Y+ L+++      + +AI +F  ++R  I  ++V YN+MI 
Sbjct: 211  ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 270

Query: 406  IYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEI 585
            +YGK    ++A  LI+EM   G+ PN ++YST++S++ +  K   A  +F +++   C +
Sbjct: 271  VYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPL 330

Query: 586  DQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVF 753
            D      MI  Y +  +V  A RL   L++    P+ +   T + +   A    EA  +F
Sbjct: 331  DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 390

Query: 754  RQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKL 933
            R        +++  Y  M+++Y +         + + M+  G  P++   S +++ +GK 
Sbjct: 391  RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 450

Query: 934  QEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELY 1113
             + ++A  L+ +++  G      ++  M+  Y         + L   L L  NI ++   
Sbjct: 451  GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 510

Query: 1114 LVVASLYERANKLNEASLIMKRLSMGG 1194
             ++A    +A    EA+ + ++    G
Sbjct: 511  TILA----KAGSTEEATWVFRQAFESG 533



 Score =  112 bits (280), Expect = 4e-22
 Identities = 76/324 (23%), Positives = 152/324 (46%), Gaps = 4/324 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   +    P+V +YN +L+    A+ FG A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 144  LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFG 203

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + A + +Q+M+   +  + + YS +I +  ++    +A  +F +L+ SG   D V
Sbjct: 204  KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLV 263

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  Y +A L   A+ L+ E+      P+ +   T +++     +  EA  VF + 
Sbjct: 264  AYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEM 323

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
             +     D+     M+++Y +         +F  +RK    P+    + +L  YG+ + F
Sbjct: 324  KEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELF 383

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVV 1122
             +A  L+  MQ +    +   +  M+ +YG   + +K  +L + +           Y  +
Sbjct: 384  GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTI 443

Query: 1123 ASLYERANKLNEASLIMKRLSMGG 1194
             S++ +A KL+ A+ + ++L   G
Sbjct: 444  ISIWGKAGKLDRAATLFQKLRSSG 467


>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Glycine max]
          Length = 667

 Score =  636 bits (1641), Expect = e-180
 Identities = 315/395 (79%), Positives = 357/395 (90%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLLL+EMR   V PDTVSYSTLL++YVDNQKFVEAL++F+EMNE KC LDLTTC
Sbjct: 263  KLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTC 322

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQL M KEAD LFWSMRKMGI+PNV+SYNTLL+VYGEA+LFGEAIHLFRLMQ 
Sbjct: 323  NIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQS 382

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KD+ QNVVTYNTMI IYGKTLEHEKA NLIQEM  RGIEPNAITYSTIISIW K GKLDR
Sbjct: 383  KDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDR 442

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AA+LFQKLRSSG  ID+VLYQTMIVAYER GLVAHAKRLLHELKRPDNIPR+TAI ILAR
Sbjct: 443  AAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAILAR 502

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DA E+KDI+V+ CM+ L+++NK+  NV+EVFE+MR+ GYFPDS++
Sbjct: 503  AGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDV 562

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNA+GKL+EF+KADALY +M EEGCVF DEVHFQMLSLYG RKDF  VESLFE+LD
Sbjct: 563  IALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLYGARKDFVMVESLFEKLD 622

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLS 1185
             + NINKKEL+LVVAS+YERA++LN+AS IM R++
Sbjct: 623  SNPNINKKELHLVVASIYERADRLNDASRIMNRMN 657



 Score =  123 bits (308), Expect = 3e-25
 Identities = 82/380 (21%), Positives = 175/380 (46%), Gaps = 6/380 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+ LL   +  +++  A  +F EM +     D  T + +I  +G+  +   +  L
Sbjct: 142  PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSS--L 199

Query: 238  FW--SMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIY 411
            FW   M +  +  ++V Y+ L+ +  +   + +AI +F  ++   I  +++ YN+MI ++
Sbjct: 200  FWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVF 259

Query: 412  GKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQ 591
            GK     +A  L+QEM+   ++P+ ++YST+++I+    K   A  LF ++  + C +D 
Sbjct: 260  GKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDL 319

Query: 592  VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQ 759
                 MI  Y +  +   A RL   +++    P+ I   T + +   A    EA  +FR 
Sbjct: 320  TTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRL 379

Query: 760  ASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQE 939
                   +++  Y  M+ +Y +         + + M K G  P++   S +++ + K  +
Sbjct: 380  MQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGK 439

Query: 940  FEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLV 1119
             ++A  L+ +++  G    + ++  M+  Y         + L   L    NI +     +
Sbjct: 440  LDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAI 499

Query: 1120 VASLYERANKLNEASLIMKR 1179
            +A    RA ++ EA+ + ++
Sbjct: 500  LA----RAGRIEEATWVFRQ 515



 Score =  119 bits (299), Expect = 3e-24
 Identities = 80/324 (24%), Positives = 158/324 (48%), Gaps = 4/324 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   K    P++ +YN LL+    A+ +  A  LF  M++K +  +  TY+T+I  +G
Sbjct: 131  LDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFG 190

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + +   +Q+M+   +  + + YS +I +  K+    +A  +F +L++S    D +
Sbjct: 191  KHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLI 250

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  + +A L   A+ LL E++    +PD +   T + I     +  EA  +F + 
Sbjct: 251  AYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEM 310

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
            ++A    D+     M+++Y +   P     +F  MRK G  P+    + +L  YG+   F
Sbjct: 311  NEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLF 370

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVV 1122
             +A  L+  MQ +    +   +  M+++YG   + +K  +L + ++          Y  +
Sbjct: 371  GEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTI 430

Query: 1123 ASLYERANKLNEASLIMKRLSMGG 1194
             S++E+A KL+ A+++ ++L   G
Sbjct: 431  ISIWEKAGKLDRAAILFQKLRSSG 454


>ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Glycine max]
          Length = 658

 Score =  635 bits (1637), Expect = e-179
 Identities = 317/395 (80%), Positives = 357/395 (90%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLLL+EMR   V PDTVSYSTLL++YVDNQKFVEAL++F EMNE KC LDLTTC
Sbjct: 254  KLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTC 313

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQL M KEAD LFWSMRKMGI+PNVVSYNTLL+VYGEA+LFGEAIHLFRLMQ 
Sbjct: 314  NIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQS 373

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KD+ QNVVTYNTMI IYGKTLEHEKA NLIQEM+ RGIEPNAITYSTIISIW K GKLDR
Sbjct: 374  KDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDR 433

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AA+LFQKLRSSG  ID+VLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR+TAI ILAR
Sbjct: 434  AAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIGILAR 493

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DA E+KDI+V+ CM+ L+++NK+  NV+EVFE+MR  GYFPDS++
Sbjct: 494  AGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSDV 553

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNA+GKL+EF+KADALY +M EEGCVF DEVHFQMLSLYG RKDF  VESLFE+LD
Sbjct: 554  IALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLYGARKDFVMVESLFEKLD 613

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKRLS 1185
             + NINKKEL+LVVAS+YERA++LN+AS IM R++
Sbjct: 614  SNPNINKKELHLVVASIYERADRLNDASRIMNRMN 648



 Score =  120 bits (301), Expect = 2e-24
 Identities = 81/380 (21%), Positives = 176/380 (46%), Gaps = 6/380 (1%)
 Frame = +1

Query: 58   PDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTCNIMIDVYGQLDMAKEADGL 237
            P   +Y+ LL   +  +++  A  +F EM +     D  T + +I  +G+  +   +  L
Sbjct: 133  PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSS--L 190

Query: 238  FW--SMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIY 411
            FW   M +  +  ++V Y+ L+ +  +   + +AI +F  ++   I  +++ YN+MI ++
Sbjct: 191  FWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVF 250

Query: 412  GKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQ 591
            GK     +A  L+QEM+   ++P+ ++YST+++I+    K   A  LF ++  + C +D 
Sbjct: 251  GKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDL 310

Query: 592  VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAITILARAGRIEEATWVFRQ 759
                 MI  Y +  +   A RL   +++    P+ +   T + +   A    EA  +FR 
Sbjct: 311  TTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRL 370

Query: 760  ASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQE 939
                   +++  Y  M+ +Y +         + + M+K G  P++   S +++ + K  +
Sbjct: 371  MQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGK 430

Query: 940  FEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLV 1119
             ++A  L+ +++  G    + ++  M+  Y         + L   L    NI +     +
Sbjct: 431  LDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIGI 490

Query: 1120 VASLYERANKLNEASLIMKR 1179
            +A    RA ++ EA+ + ++
Sbjct: 491  LA----RAGRIEEATWVFRQ 506



 Score =  118 bits (295), Expect = 8e-24
 Identities = 80/324 (24%), Positives = 157/324 (48%), Gaps = 4/324 (1%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   K    P++ +YN LL+    A+ +  A  LF  M++K +  +  TY+T+I  +G
Sbjct: 122  LDWINDKALYSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFG 181

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + +   +Q+M+   +  + + YS +I +  K+    +A  +F +L++S    D +
Sbjct: 182  KHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLI 241

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  + +A L   A+ LL E++    +PD +   T + I     +  EA  +F + 
Sbjct: 242  AYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEM 301

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
            ++A    D+     M+++Y +   P     +F  MRK G  P+    + +L  YG+   F
Sbjct: 302  NEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLF 361

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLDLDLNINKKELYLVV 1122
             +A  L+  MQ +    +   +  M+++YG   + +K  +L + +           Y  +
Sbjct: 362  GEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTI 421

Query: 1123 ASLYERANKLNEASLIMKRLSMGG 1194
             S++E+A KL+ A+++ ++L   G
Sbjct: 422  ISIWEKAGKLDRAAILFQKLRSSG 445


>gb|ESW35832.1| hypothetical protein PHAVU_001G268500g [Phaseolus vulgaris]
          Length = 677

 Score =  629 bits (1622), Expect = e-177
 Identities = 310/393 (78%), Positives = 355/393 (90%)
 Frame = +1

Query: 1    KLFRDARLLLKEMRLAGVVPDTVSYSTLLSMYVDNQKFVEALTVFTEMNEMKCKLDLTTC 180
            KLFR+ARLLL+EM    V PDTVSYSTLL++YVDNQKFVEAL++F++MNE KC LDLTTC
Sbjct: 273  KLFREARLLLQEMADNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSQMNEAKCPLDLTTC 332

Query: 181  NIMIDVYGQLDMAKEADGLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQR 360
            NIMIDVYGQL M KEAD LFWSMRKM I+PNVVSYNTLL+VYG+AELFGEAIHLFRLMQ 
Sbjct: 333  NIMIDVYGQLHMPKEADRLFWSMRKMEIQPNVVSYNTLLRVYGDAELFGEAIHLFRLMQS 392

Query: 361  KDILQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 540
            KD+ QNVVTYNTMI IYGKTLEHEKA NL+QEM+ R IEPNAITYSTIISIW K GKLDR
Sbjct: 393  KDVPQNVVTYNTMINIYGKTLEHEKATNLVQEMKKRDIEPNAITYSTIISIWEKAGKLDR 452

Query: 541  AAMLFQKLRSSGCEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAR 720
            AA+LFQKLRSSG  ID+VLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAI ILAR
Sbjct: 453  AAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIVILAR 512

Query: 721  AGRIEEATWVFRQASDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNI 900
            AGRIEEATWVFRQA DAGE+KDI+V+ CM+ L+++NK+ +NV+EVFE+MR+ GYFPDS++
Sbjct: 513  AGRIEEATWVFRQAFDAGEVKDISVFGCMINLFSKNKKYSNVVEVFEKMRQVGYFPDSDV 572

Query: 901  ISLVLNAYGKLQEFEKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERLD 1080
            I+LVLNA+GKL+EF+KAD LY +M EEGCVF DEVHFQMLSLYG RKDF  VESLFE+LD
Sbjct: 573  IALVLNAFGKLREFDKADGLYRQMHEEGCVFPDEVHFQMLSLYGARKDFMMVESLFEKLD 632

Query: 1081 LDLNINKKELYLVVASLYERANKLNEASLIMKR 1179
             + N+NKKEL+LVVAS+YERA++LN+AS +M +
Sbjct: 633  SNPNVNKKELHLVVASIYERADRLNDASRVMNK 665



 Score =  112 bits (281), Expect = 3e-22
 Identities = 80/327 (24%), Positives = 157/327 (48%), Gaps = 7/327 (2%)
 Frame = +1

Query: 235  LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKDILQNVVTYNTMIKIYG 414
            L W   K    P++ +YN +L+    A+ +  A  LF  M+ K +  +  TY+T+I  + 
Sbjct: 141  LDWINEKALYSPSLFAYNVVLRNVLRAKQWHLAHGLFDEMRHKGLSPDRYTYSTLITSFA 200

Query: 415  KTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGCEIDQV 594
            K    + +   +Q+M+   +  + + YS +I +  K+    +A  +F +L++S    D +
Sbjct: 201  KDGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLCDYSKAISIFNRLKASAITPDLI 260

Query: 595  LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILARAGRIEEATWVFRQA 762
             Y +MI  + +A L   A+ LL E+     +PD +   T + I     +  EA  +F Q 
Sbjct: 261  AYNSMINVFGKAKLFREARLLLQEMADNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSQM 320

Query: 763  SDAGEIKDIAVYECMVELYTRNKRPTNVIEVFERMRKAGYFPDSNIISLVLNAYGKLQEF 942
            ++A    D+     M+++Y +   P     +F  MRK    P+    + +L  YG  + F
Sbjct: 321  NEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMEIQPNVVSYNTLLRVYGDAELF 380

Query: 943  EKADALYSEMQEEGCVFSDEVHFQMLSLYGGRKDFKKVESLFERL---DLDLNINKKELY 1113
             +A  L+  MQ +    +   +  M+++YG   + +K  +L + +   D++ N      Y
Sbjct: 381  GEAIHLFRLMQSKDVPQNVVTYNTMINIYGKTLEHEKATNLVQEMKKRDIEPN---AITY 437

Query: 1114 LVVASLYERANKLNEASLIMKRLSMGG 1194
              + S++E+A KL+ A+++ ++L   G
Sbjct: 438  STIISIWEKAGKLDRAAILFQKLRSSG 464