BLASTX nr result
ID: Catharanthus23_contig00015346
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00015346
(201 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ07316.1| hypothetical protein PRUPE_ppa013072mg [Prunus pe... 95 1e-17
ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera] gi|... 95 1e-17
ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121... 94 1e-17
ref|XP_004302471.1| PREDICTED: probable histone H2AXa-like [Frag... 94 2e-17
gb|EOX94904.1| Gamma histone variant H2AX [Theobroma cacao] 94 2e-17
gb|EXC34660.1| Histone H2AX [Morus notabilis] 93 4e-17
ref|NP_175868.1| gamma histone variant H2AX [Arabidopsis thalian... 93 4e-17
ref|XP_006433236.1| hypothetical protein CICLE_v10002804mg [Citr... 93 4e-17
ref|XP_006417635.1| hypothetical protein EUTSA_v10008780mg [Eutr... 93 4e-17
ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucu... 93 4e-17
ref|XP_002892475.1| hypothetical protein ARALYDRAFT_888122 [Arab... 93 4e-17
ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin... 93 4e-17
ref|XP_002512309.1| histone h2a, putative [Ricinus communis] gi|... 93 4e-17
ref|XP_002520711.1| histone h2a, putative [Ricinus communis] gi|... 93 4e-17
gb|EOY11258.1| Histone superfamily protein [Theobroma cacao] 92 5e-17
ref|XP_004494649.1| PREDICTED: histone H2AX-like [Cicer arietinum] 92 7e-17
sp|O65759.1|H2AX_CICAR RecName: Full=Histone H2AX gi|3204129|emb... 92 7e-17
ref|NP_172363.1| putative histone H2AXa [Arabidopsis thaliana] g... 92 9e-17
ref|XP_006444190.1| hypothetical protein CICLE_v10022778mg [Citr... 92 9e-17
ref|XP_006305729.1| hypothetical protein CARUB_v10010499mg, part... 92 9e-17
>gb|EMJ07316.1| hypothetical protein PRUPE_ppa013072mg [Prunus persica]
Length = 141
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/66 (72%), Positives = 52/66 (78%)
Frame = +3
Query: 3 ETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEY 182
E G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEY
Sbjct: 5 EAGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEY 64
Query: 183 LAAEVL 200
LAAEVL
Sbjct: 65 LAAEVL 70
>ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera]
gi|147815277|emb|CAN70026.1| hypothetical protein
VITISV_030174 [Vitis vinifera]
Length = 139
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/65 (73%), Positives = 52/65 (80%)
Frame = +3
Query: 6 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 185
TG++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYL
Sbjct: 4 TGSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 63
Query: 186 AAEVL 200
AAEVL
Sbjct: 64 AAEVL 68
>ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1|
Histone H2A [Medicago truncatula]
gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold
[Medicago truncatula] gi|124360160|gb|ABN08176.1|
Histone H2A; Histone-fold [Medicago truncatula]
gi|355501355|gb|AES82558.1| Histone H2A [Medicago
truncatula] gi|355501357|gb|AES82560.1| Histone H2A
[Medicago truncatula] gi|388498640|gb|AFK37386.1|
unknown [Medicago truncatula]
Length = 139
Score = 94.4 bits (233), Expect = 1e-17
Identities = 48/65 (73%), Positives = 51/65 (78%)
Frame = +3
Query: 6 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 185
TG +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYL
Sbjct: 4 TGTTKGGRGKPKAAKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 63
Query: 186 AAEVL 200
AAEVL
Sbjct: 64 AAEVL 68
>ref|XP_004302471.1| PREDICTED: probable histone H2AXa-like [Fragaria vesca subsp.
vesca]
Length = 141
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/66 (71%), Positives = 53/66 (80%)
Frame = +3
Query: 3 ETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEY 182
E+G++KGGRG AGLQFPVGRIARFLK+GKYAER+G+GAPVYLSAVLEY
Sbjct: 5 ESGSTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEY 64
Query: 183 LAAEVL 200
LAAEVL
Sbjct: 65 LAAEVL 70
>gb|EOX94904.1| Gamma histone variant H2AX [Theobroma cacao]
Length = 139
Score = 93.6 bits (231), Expect = 2e-17
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = +3
Query: 6 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 185
TG++KGGRG AGLQFPVGRIARFLKAGKYA+R+G+GAPVYLSAVLEYL
Sbjct: 4 TGSTKGGRGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYL 63
Query: 186 AAEVL 200
AAEVL
Sbjct: 64 AAEVL 68
>gb|EXC34660.1| Histone H2AX [Morus notabilis]
Length = 269
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +3
Query: 9 GASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYLA 188
G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYLA
Sbjct: 5 GSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLA 64
Query: 189 AEVL 200
AEVL
Sbjct: 65 AEVL 68
>ref|NP_175868.1| gamma histone variant H2AX [Arabidopsis thaliana]
gi|567130275|ref|XP_006392493.1| hypothetical protein
EUTSA_v10023750mg [Eutrema salsugineum]
gi|75313113|sp|Q9S9K7.1|H2AXB_ARATH RecName:
Full=Probable histone H2AXb; AltName: Full=HTA3
gi|15724172|gb|AAL06478.1|AF411788_1 At1g54690/T22H22_12
[Arabidopsis thaliana] gi|3776566|gb|AAC64883.1| Strong
similarity to histone H2A gb|AJ006768 from Cicer
arietinum [Arabidopsis thaliana]
gi|20334846|gb|AAM16179.1| At1g54690/T22H22_12
[Arabidopsis thaliana] gi|21553797|gb|AAM62890.1|
histone H2A, putative [Arabidopsis thaliana]
gi|332195014|gb|AEE33135.1| gamma histone variant H2AX
[Arabidopsis thaliana] gi|557088999|gb|ESQ29779.1|
hypothetical protein EUTSA_v10023750mg [Eutrema
salsugineum]
Length = 142
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +3
Query: 6 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 185
+G +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYL
Sbjct: 7 SGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 66
Query: 186 AAEVL 200
AAEVL
Sbjct: 67 AAEVL 71
>ref|XP_006433236.1| hypothetical protein CICLE_v10002804mg [Citrus clementina]
gi|568835787|ref|XP_006471940.1| PREDICTED: histone
H2AX-like [Citrus sinensis] gi|557535358|gb|ESR46476.1|
hypothetical protein CICLE_v10002804mg [Citrus
clementina]
Length = 140
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +3
Query: 9 GASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYLA 188
G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYLA
Sbjct: 6 GSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLA 65
Query: 189 AEVL 200
AEVL
Sbjct: 66 AEVL 69
>ref|XP_006417635.1| hypothetical protein EUTSA_v10008780mg [Eutrema salsugineum]
gi|557095406|gb|ESQ35988.1| hypothetical protein
EUTSA_v10008780mg [Eutrema salsugineum]
Length = 207
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +3
Query: 6 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 185
+G +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYL
Sbjct: 72 SGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 131
Query: 186 AAEVL 200
AAEVL
Sbjct: 132 AAEVL 136
>ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucumis sativus]
gi|449485770|ref|XP_004157270.1| PREDICTED: probable
histone H2AXb-like [Cucumis sativus]
Length = 140
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +3
Query: 9 GASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYLA 188
G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYLA
Sbjct: 6 GSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLA 65
Query: 189 AEVL 200
AEVL
Sbjct: 66 AEVL 69
>ref|XP_002892475.1| hypothetical protein ARALYDRAFT_888122 [Arabidopsis lyrata subsp.
lyrata] gi|297338317|gb|EFH68734.1| hypothetical protein
ARALYDRAFT_888122 [Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +3
Query: 6 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 185
+G +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYL
Sbjct: 7 SGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 66
Query: 186 AAEVL 200
AAEVL
Sbjct: 67 AAEVL 71
>ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max]
gi|255625587|gb|ACU13138.1| unknown [Glycine max]
gi|561020316|gb|ESW19087.1| hypothetical protein
PHAVU_006G095800g [Phaseolus vulgaris]
Length = 140
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +3
Query: 9 GASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYLA 188
G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYLA
Sbjct: 6 GSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLA 65
Query: 189 AEVL 200
AEVL
Sbjct: 66 AEVL 69
>ref|XP_002512309.1| histone h2a, putative [Ricinus communis]
gi|223548270|gb|EEF49761.1| histone h2a, putative
[Ricinus communis]
Length = 140
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +3
Query: 9 GASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYLA 188
G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYLA
Sbjct: 6 GSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLA 65
Query: 189 AEVL 200
AEVL
Sbjct: 66 AEVL 69
>ref|XP_002520711.1| histone h2a, putative [Ricinus communis]
gi|223540096|gb|EEF41673.1| histone h2a, putative
[Ricinus communis]
Length = 139
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +3
Query: 9 GASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYLA 188
GA+KGGRG AGLQFPVGRIARFLKAGKYA+R+G+GAPVYLSAVLEYLA
Sbjct: 5 GATKGGRGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYLA 64
Query: 189 AEVL 200
AEVL
Sbjct: 65 AEVL 68
>gb|EOY11258.1| Histone superfamily protein [Theobroma cacao]
Length = 140
Score = 92.4 bits (228), Expect = 5e-17
Identities = 50/66 (75%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = +3
Query: 6 TGAS-KGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEY 182
TGAS KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEY
Sbjct: 4 TGASTKGGRGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEY 63
Query: 183 LAAEVL 200
LAAEVL
Sbjct: 64 LAAEVL 69
>ref|XP_004494649.1| PREDICTED: histone H2AX-like [Cicer arietinum]
Length = 139
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/65 (72%), Positives = 50/65 (76%)
Frame = +3
Query: 6 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 185
T +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYL
Sbjct: 4 TATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 63
Query: 186 AAEVL 200
AAEVL
Sbjct: 64 AAEVL 68
>sp|O65759.1|H2AX_CICAR RecName: Full=Histone H2AX gi|3204129|emb|CAA07234.1| histone H2A
[Cicer arietinum]
Length = 139
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/65 (72%), Positives = 50/65 (76%)
Frame = +3
Query: 6 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 185
T +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYL
Sbjct: 4 TATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 63
Query: 186 AAEVL 200
AAEVL
Sbjct: 64 AAEVL 68
>ref|NP_172363.1| putative histone H2AXa [Arabidopsis thaliana]
gi|75276926|sp|O04848.1|H2AXA_ARATH RecName:
Full=Probable histone H2AXa; AltName: Full=HTA5
gi|15724304|gb|AAL06545.1|AF412092_1 At1g08880/F7G19_24
[Arabidopsis thaliana] gi|1922944|gb|AAB70416.1| Strong
similarity to Picea histone H2A (gb|X67819). ESTs
gb|ATTS3874,gb|T46627,gb|T14194 come from this gene
[Arabidopsis thaliana] gi|20334750|gb|AAM16236.1|
At1g08880/F7G19_24 [Arabidopsis thaliana]
gi|332190240|gb|AEE28361.1| putative histone H2AXa
[Arabidopsis thaliana]
Length = 142
Score = 91.7 bits (226), Expect = 9e-17
Identities = 46/65 (70%), Positives = 51/65 (78%)
Frame = +3
Query: 6 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 185
+G +KGGRG AGLQFPVGRIARFLK+GKYAER+G+GAPVYLSAVLEYL
Sbjct: 7 SGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYL 66
Query: 186 AAEVL 200
AAEVL
Sbjct: 67 AAEVL 71
>ref|XP_006444190.1| hypothetical protein CICLE_v10022778mg [Citrus clementina]
gi|568852331|ref|XP_006479831.1| PREDICTED: histone
H2AX-like [Citrus sinensis] gi|557546452|gb|ESR57430.1|
hypothetical protein CICLE_v10022778mg [Citrus
clementina]
Length = 139
Score = 91.7 bits (226), Expect = 9e-17
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = +3
Query: 9 GASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYLA 188
G++KGGRG AGLQFPVGRIARFLKAGKYA+R+G+GAPVYLSAVLEYLA
Sbjct: 5 GSTKGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYLA 64
Query: 189 AEVL 200
AEVL
Sbjct: 65 AEVL 68
>ref|XP_006305729.1| hypothetical protein CARUB_v10010499mg, partial [Capsella rubella]
gi|482574440|gb|EOA38627.1| hypothetical protein
CARUB_v10010499mg, partial [Capsella rubella]
Length = 164
Score = 91.7 bits (226), Expect = 9e-17
Identities = 46/65 (70%), Positives = 51/65 (78%)
Frame = +3
Query: 6 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 185
+G +KGGRG AGLQFPVGRIARFLK+GKYAER+G+GAPVYLSAVLEYL
Sbjct: 29 SGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYL 88
Query: 186 AAEVL 200
AAEVL
Sbjct: 89 AAEVL 93