BLASTX nr result
ID: Catharanthus23_contig00015313
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00015313
(207 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322407.2| hypothetical protein POPTR_0015s14630g [Popu... 86 5e-15
ref|XP_006413323.1| hypothetical protein EUTSA_v10024921mg [Eutr... 84 3e-14
ref|XP_006421716.1| hypothetical protein CICLE_v10004726mg [Citr... 83 3e-14
ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
gb|EMJ20518.1| hypothetical protein PRUPE_ppa019039mg [Prunus pe... 82 7e-14
ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arab... 82 7e-14
ref|NP_194257.1| pentatricopeptide repeat protein OTP70 [Arabido... 81 1e-13
ref|XP_006490089.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
ref|XP_004234452.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
ref|XP_006282784.1| hypothetical protein CARUB_v10006372mg, part... 79 5e-13
gb|AHB18407.1| pentatricopeptide repeat-containing protein [Goss... 79 6e-13
gb|EOY22925.1| Tetratricopeptide repeat-like superfamily protein... 77 3e-12
ref|XP_004307818.1| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
gb|ESW03326.1| hypothetical protein PHAVU_011G004900g [Phaseolus... 72 8e-11
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 70 2e-10
ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
ref|XP_004500471.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_006491677.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_006428441.1| hypothetical protein CICLE_v10011174mg [Citr... 67 2e-09
>ref|XP_002322407.2| hypothetical protein POPTR_0015s14630g [Populus trichocarpa]
gi|550322722|gb|EEF06534.2| hypothetical protein
POPTR_0015s14630g [Populus trichocarpa]
Length = 529
Score = 85.9 bits (211), Expect = 5e-15
Identities = 48/86 (55%), Positives = 56/86 (65%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKVQ---------MEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
LLSACAH G V+DGER F + MEHYACMVNLYGR G I+EAY +I+ +M +
Sbjct: 401 LLSACAHLGLVKDGERLFSLMKAKYQINPIMEHYACMVNLYGRAGLINEAYAIIRDQM-E 459
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
FEAGP SCYLH N + GEI
Sbjct: 460 FEAGPTVWGALLYSCYLHRNVDTGEI 485
>ref|XP_006413323.1| hypothetical protein EUTSA_v10024921mg [Eutrema salsugineum]
gi|557114493|gb|ESQ54776.1| hypothetical protein
EUTSA_v10024921mg [Eutrema salsugineum]
Length = 523
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKV---------QMEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
+LS CA+ G VEDGER F + +MEHYACMVNLYGR G ++EAY +I +MG
Sbjct: 393 VLSLCANTGMVEDGERLFSLMSEGYGISPRMEHYACMVNLYGRAGMMEEAYSMIVQEMG- 451
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
FEAGP +CYLH N++IGE+
Sbjct: 452 FEAGPTVWGALLYACYLHGNADIGEV 477
>ref|XP_006421716.1| hypothetical protein CICLE_v10004726mg [Citrus clementina]
gi|557523589|gb|ESR34956.1| hypothetical protein
CICLE_v10004726mg [Citrus clementina]
Length = 526
Score = 83.2 bits (204), Expect = 3e-14
Identities = 47/85 (55%), Positives = 54/85 (63%), Gaps = 17/85 (20%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKV---------QMEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
LLSACAH G V+DGER F V ++EHYACMVNLYGR G IDEAY +I KM +
Sbjct: 396 LLSACAHLGSVKDGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKM-E 454
Query: 154 FEAGP--------SCYLHTNSNIGE 204
FEA P +CYLH N +GE
Sbjct: 455 FEASPVVWGALLYACYLHGNVCMGE 479
>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic [Vitis vinifera]
gi|296084180|emb|CBI24568.3| unnamed protein product
[Vitis vinifera]
Length = 516
Score = 83.2 bits (204), Expect = 3e-14
Identities = 46/86 (53%), Positives = 56/86 (65%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKVQ---------MEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
LLSACAH G V+DGE F + MEHYACMVNLYGR G I+EAYE+I+ +M +
Sbjct: 384 LLSACAHLGLVKDGEGLFSMMREDYGMIPSMEHYACMVNLYGRAGLIEEAYEIIEKRM-E 442
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
FEAGP +CY H N +IG+I
Sbjct: 443 FEAGPTVWGALLYACYFHHNVDIGKI 468
>gb|EMJ20518.1| hypothetical protein PRUPE_ppa019039mg [Prunus persica]
Length = 519
Score = 82.0 bits (201), Expect = 7e-14
Identities = 46/86 (53%), Positives = 54/86 (62%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKVQ---------MEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
+LS CAH G V+DGER + V MEHYACMVNLYGR GRI EAY +I M +
Sbjct: 390 ILSTCAHLGLVKDGERLYSVMKNRYRISPIMEHYACMVNLYGRAGRIREAYGIIVDGM-E 448
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
FEAGP +CYLH N +IGE+
Sbjct: 449 FEAGPTVWGALLYACYLHGNVDIGEV 474
>ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
lyrata] gi|297313453|gb|EFH43876.1| hypothetical protein
ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata]
Length = 758
Score = 82.0 bits (201), Expect = 7e-14
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKV---------QMEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
+LS CA+ G VEDGER F + +MEHYACMVNLYGR G ++EAY +I +M +
Sbjct: 628 VLSLCANTGMVEDGERLFSLMSKEYGINPKMEHYACMVNLYGRAGMMEEAYSMIVQEM-E 686
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
FEAGP +CYLH N++IGE+
Sbjct: 687 FEAGPTVWGALLYACYLHGNTDIGEV 712
>ref|NP_194257.1| pentatricopeptide repeat protein OTP70 [Arabidopsis thaliana]
gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g25270, chloroplastic; Flags: Precursor
gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis
thaliana] gi|7269378|emb|CAB81338.1| putative protein
[Arabidopsis thaliana] gi|332659633|gb|AEE85033.1|
pentatricopeptide repeat protein OTP70 [Arabidopsis
thaliana]
Length = 527
Score = 81.3 bits (199), Expect = 1e-13
Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKV---------QMEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
+LS CA+ G VEDGER F + +MEHYACMVNLYGR G ++EAY +I +MG
Sbjct: 397 VLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMG- 455
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
EAGP +CYLH N++IGE+
Sbjct: 456 LEAGPTVWGALLYACYLHGNTDIGEV 481
>ref|XP_006490089.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Citrus sinensis]
Length = 526
Score = 79.7 bits (195), Expect = 4e-13
Identities = 46/85 (54%), Positives = 53/85 (62%), Gaps = 17/85 (20%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKV---------QMEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
LLSACAH G V+ GER F V ++EHYACMVNLYGR G IDEAY +I KM +
Sbjct: 396 LLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKM-E 454
Query: 154 FEAGP--------SCYLHTNSNIGE 204
FEA P +CYLH N +GE
Sbjct: 455 FEASPVVWGALLYACYLHGNVCMGE 479
>ref|XP_004234452.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Solanum lycopersicum]
Length = 539
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKV---------QMEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
LLSACAH G++ED ER F+ +MEHY+CMVNLYGR G ID+A++ + +M +
Sbjct: 402 LLSACAHLGKLEDAERLFRAMQERYDISPRMEHYSCMVNLYGRLGLIDKAFDFVMKRM-E 460
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
FEAGP +CY H N IGE+
Sbjct: 461 FEAGPTVWGALLYACYRHGNVKIGEL 486
>ref|XP_006282784.1| hypothetical protein CARUB_v10006372mg, partial [Capsella rubella]
gi|482551489|gb|EOA15682.1| hypothetical protein
CARUB_v10006372mg, partial [Capsella rubella]
Length = 533
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKV---------QMEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
+LS CA+ G ++ GER F + +MEHYACMVNLYGR G ++EAY +I +MG
Sbjct: 403 VLSICANTGMIQVGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMVEEAYSMIVQEMG- 461
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
FEAGP +CYLH N++IGE+
Sbjct: 462 FEAGPTVWGALLYACYLHGNADIGEV 487
>gb|AHB18407.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 522
Score = 79.0 bits (193), Expect = 6e-13
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKV---------QMEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
+LSACAH G V+DGER F + +MEHYACM+NLYGR G IDEA+ +I +M +
Sbjct: 394 ILSACAHLGLVKDGERLFWLMRKKYGIDPRMEHYACMINLYGRAGLIDEAFNMIVERM-E 452
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
FEAGP +C +H N IGEI
Sbjct: 453 FEAGPTVWGAMLYACSVHGNIQIGEI 478
>gb|EOY22925.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 773
Score = 76.6 bits (187), Expect = 3e-12
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKVQ---------MEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
+LSACAH G V DGE+ F + MEHYACMVNLYGR G IDEA+ LI +M +
Sbjct: 645 ILSACAHLGFVRDGEQLFSLMRKKYAINPIMEHYACMVNLYGRAGLIDEAFTLIVERM-E 703
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
FEAGP +C +H + ++GEI
Sbjct: 704 FEAGPTVWGALLHACSVHGHIDVGEI 729
>ref|XP_004307818.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 522
Score = 75.1 bits (183), Expect = 9e-12
Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKVQ---------MEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
+LS CAH V+DGER F + MEHYACMVNLYGR G I EAY LI M +
Sbjct: 392 MLSVCAHLSLVKDGERLFSIMKNRYRISPIMEHYACMVNLYGRAGLIKEAYGLIMEGM-E 450
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
FEAGP +CYL+ N+ IG +
Sbjct: 451 FEAGPTVWGALLYACYLYGNAEIGGV 476
>gb|ESW03326.1| hypothetical protein PHAVU_011G004900g [Phaseolus vulgaris]
Length = 522
Score = 72.0 bits (175), Expect = 8e-11
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKVQ---------MEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
+LSACA+ G V++GER F + MEHY CMVNLYGR G I +AY +I MG
Sbjct: 391 VLSACAYLGLVKEGERVFALMSAKHKIKPIMEHYGCMVNLYGRAGLIKKAYSIIVDGMGS 450
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
AGP +C+LH ++ IGEI
Sbjct: 451 EAAGPTLWGALLYACFLHGDATIGEI 476
>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Cucumis sativus]
Length = 489
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFF---------KVQMEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
LLS CAH G V++G + + + +EHYACMVNLYGR G I+EAY++I TK +
Sbjct: 359 LLSTCAHLGLVKEGGKLYFLMKGKYGIRPTIEHYACMVNLYGRAGMIEEAYKII-TKGME 417
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
EAGP +CYLH++ +I EI
Sbjct: 418 IEAGPTIWGALLYACYLHSDVDIAEI 443
>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g25270, chloroplastic-like [Cucumis sativus]
Length = 489
Score = 70.5 bits (171), Expect = 2e-10
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFF---------KVQMEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
LLS CAH G V++G + + +EHYACMVNLYGR G I+EAY++I TK +
Sbjct: 359 LLSTCAHLGLVKEGXELYFLMKGKYGIRPTIEHYACMVNLYGRAGMIEEAYKII-TKGME 417
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
EAGP +CYLH++ +I EI
Sbjct: 418 IEAGPTIWGALLYACYLHSDVDIAEI 443
>ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Glycine max]
Length = 526
Score = 70.5 bits (171), Expect = 2e-10
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKVQ---------MEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
+LSACA+ G ++DGER F + MEHY CMVNLYGR G I +AY +I +G
Sbjct: 395 ILSACAYLGLLKDGERLFALMCGKYKIKPIMEHYGCMVNLYGRAGLIKKAYSIIVDGIGT 454
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
AGP +C++H ++ IGEI
Sbjct: 455 EAAGPTLWGALLYACFMHGDATIGEI 480
>ref|XP_004500471.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Cicer arietinum]
Length = 520
Score = 67.8 bits (164), Expect = 1e-09
Identities = 41/86 (47%), Positives = 48/86 (55%), Gaps = 17/86 (19%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFFKVQ---------MEHYACMVNLYGRTGRIDEAYELIKTKMGD 153
LLSACAH G V+DGER F + MEHY CMVNL GR G I++AY +I +M
Sbjct: 390 LLSACAHLGLVKDGERLFALMCEKYKIKPIMEHYGCMVNLCGRAGLIEKAYNII-DRMDS 448
Query: 154 FEAGP--------SCYLHTNSNIGEI 207
GP +C LH N IGEI
Sbjct: 449 ETVGPTLWGALLYACLLHGNVTIGEI 474
>ref|XP_006491677.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568877302|ref|XP_006491678.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877304|ref|XP_006491679.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X3 [Citrus sinensis]
gi|568877306|ref|XP_006491680.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X4 [Citrus sinensis]
Length = 719
Score = 67.0 bits (162), Expect = 2e-09
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 14/83 (16%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFF--------KVQMEHYACMVNLYGRTGRIDEAYELIKTKMGDF 156
+L AC+H G VE+G++FF K QMEHY CMV+L R GR+DEAY LI++ D
Sbjct: 455 VLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDA 514
Query: 157 EAG------PSCYLHTNSNIGEI 207
+ +C LH N+ IGEI
Sbjct: 515 NSVIWRALLAACRLHRNAKIGEI 537
>ref|XP_006428441.1| hypothetical protein CICLE_v10011174mg [Citrus clementina]
gi|567871705|ref|XP_006428442.1| hypothetical protein
CICLE_v10011174mg [Citrus clementina]
gi|557530498|gb|ESR41681.1| hypothetical protein
CICLE_v10011174mg [Citrus clementina]
gi|557530499|gb|ESR41682.1| hypothetical protein
CICLE_v10011174mg [Citrus clementina]
Length = 719
Score = 67.0 bits (162), Expect = 2e-09
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 14/83 (16%)
Frame = +1
Query: 1 LLSACAH*GEVEDGERFF--------KVQMEHYACMVNLYGRTGRIDEAYELIKTKMGDF 156
+L AC+H G VE+G++FF K QMEHY CMV+L R GR+DEAY LI++ D
Sbjct: 455 VLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDA 514
Query: 157 EAG------PSCYLHTNSNIGEI 207
+ +C LH N+ IGEI
Sbjct: 515 NSVIWRALLAACRLHRNAKIGEI 537