BLASTX nr result
ID: Catharanthus23_contig00015287
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00015287
(1540 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A... 47 2e-10
gb|EEC75230.1| hypothetical protein OsI_11503 [Oryza sativa Indi... 44 4e-10
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 48 6e-10
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 50 8e-10
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304... 48 1e-09
gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus pe... 50 1e-09
gb|EMJ00810.1| hypothetical protein PRUPE_ppa027126mg [Prunus pe... 45 4e-09
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 45 2e-08
gb|EMJ04214.1| hypothetical protein PRUPE_ppa017878mg [Prunus pe... 37 3e-08
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea] 44 4e-08
gb|ABA97563.1| retrotransposon protein, putative, unclassified [... 43 7e-08
ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786... 44 7e-08
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise... 43 9e-08
gb|EMJ25951.1| hypothetical protein PRUPE_ppa024202mg [Prunus pe... 46 1e-07
ref|XP_002461653.1| hypothetical protein SORBIDRAFT_02g005970 [S... 44 1e-07
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 45 2e-07
gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japo... 45 2e-07
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 43 3e-07
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga... 42 3e-07
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 44 4e-07
>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 968
Score = 47.4 bits (111), Expect(2) = 2e-10
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSIILNI 24
+ D+RPI LCNVIYKLISK IVN LK ++ ++
Sbjct: 130 VPDFRPISLCNVIYKLISKAIVNRLKGVLPDV 161
Score = 46.6 bits (109), Expect(2) = 2e-10
Identities = 19/47 (40%), Positives = 33/47 (70%)
Frame = -1
Query: 268 SSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 128
S+ + +YWS++GD V++ L +LN G +++ N T I LIPK+++P
Sbjct: 81 SARFFQEYWSVVGDDVSDLCLRVLNEGAELTGINHTLIALIPKVENP 127
>gb|EEC75230.1| hypothetical protein OsI_11503 [Oryza sativa Indica Group]
Length = 746
Score = 44.3 bits (103), Expect(3) = 4e-10
Identities = 18/32 (56%), Positives = 27/32 (84%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSIILNI 24
+K++RPI LCNVIYK++SK +VN L+ I+ +I
Sbjct: 119 LKEFRPISLCNVIYKVVSKCMVNRLRPILKDI 150
Score = 35.8 bits (81), Expect(3) = 4e-10
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 333 LVWKTRSRADWLAEGDENTTYFH 265
++W RSR WL EGD NT +FH
Sbjct: 10 IMWLQRSRVAWLKEGDRNTKFFH 32
Score = 32.0 bits (71), Expect(3) = 4e-10
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 128
LS W++L +VT V G ++ NDT+I LIPK+ P
Sbjct: 69 LSGKIFPAQWAVLKKEVTTAVRNFFLQGVMLAGVNDTSIVLIPKVSKP 116
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 48.1 bits (113), Expect(2) = 6e-10
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPIYILRIIDLS 98
L + + K+W+ + + V L ILN GG+++P N T ICLIPKI P ++ +S
Sbjct: 66 LPAVFFQKHWASVSEGVIATCLHILNDGGNIAPLNHTFICLIPKIAMPKAVMEYRPIS 123
Score = 43.9 bits (102), Expect(2) = 6e-10
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSII 33
+ +YRPI LCNVIY++I+KTI N LK I+
Sbjct: 116 VMEYRPISLCNVIYRIIAKTIANRLKLIL 144
>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 50.4 bits (119), Expect(2) = 8e-10
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPIYI 119
+ + + KYW ++GDKV L ILN G V FN T I LIPK+K P +
Sbjct: 154 MPALFFQKYWHIVGDKVAKKCLQILNGEGSVREFNHTLIALIPKVKMPTIV 204
Score = 41.2 bits (95), Expect(2) = 8e-10
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSIILNI 24
+ ++RPI LC +YK+I+KTI N LK+++ ++
Sbjct: 204 VSEFRPISLCTTVYKMIAKTIANRLKTVLSHV 235
>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
subsp. vesca]
Length = 1687
Score = 47.8 bits (112), Expect(2) = 1e-09
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = -1
Query: 268 SSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 128
S+ + YW ++GD+V+N L +LN G V N T + LIPKI++P
Sbjct: 456 SARFYQAYWEIVGDEVSNRCLQVLNEGASVKDLNHTLLALIPKIENP 502
Score = 43.1 bits (100), Expect(2) = 1e-09
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSII 33
+ D+RPI LCNV+YKLISK +VN +K ++
Sbjct: 505 VADFRPISLCNVLYKLISKAMVNRMKVLL 533
>gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus persica]
Length = 1072
Score = 50.1 bits (118), Expect(2) = 1e-09
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 128
+ + + KYW ++GDKV L ILN G V FN T I LIPK+K P
Sbjct: 404 MPALFFQKYWHIVGDKVAKKCLQILNGEGSVREFNHTLIALIPKVKMP 451
Score = 40.8 bits (94), Expect(2) = 1e-09
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSIILNI 24
+ ++RPI LC +YK+I+KTI N LK+++ ++
Sbjct: 454 VSEFRPISLCTTVYKMIAKTIANRLKTVLPHV 485
>gb|EMJ00810.1| hypothetical protein PRUPE_ppa027126mg [Prunus persica]
Length = 437
Score = 44.7 bits (104), Expect(2) = 4e-09
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKH 131
L + + KYW ++G+ + L ILN+G + FN T + LIPKIK+
Sbjct: 181 LPALFFQKYWDIIGEDIALICLQILNNGKSIKEFNHTLVALIPKIKN 227
Score = 44.7 bits (104), Expect(2) = 4e-09
Identities = 17/29 (58%), Positives = 25/29 (86%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSII 33
+K++RPI LCNVIYK+++KT+ N LK I+
Sbjct: 231 VKEFRPISLCNVIYKIVAKTLANCLKIIL 259
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 45.4 bits (106), Expect(2) = 2e-08
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSII 33
+ +YRPI LCNV+YKL+SK + N LKS++
Sbjct: 789 VTEYRPISLCNVVYKLVSKVLANRLKSVL 817
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = -1
Query: 259 YLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 128
+ K+W+++G+ V + L LN G ++ FN + I LIPK+++P
Sbjct: 743 FFQKFWNIIGNDVVDVCLRFLNGDGSIADFNHSLIALIPKVQNP 786
>gb|EMJ04214.1| hypothetical protein PRUPE_ppa017878mg [Prunus persica]
Length = 306
Score = 37.0 bits (84), Expect(3) = 3e-08
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 333 LVWKTRSRADWLAEGDENTTYFHHV 259
+ W+ R R +WL GD+NT+YFH +
Sbjct: 21 IYWRQRCRVNWLKYGDQNTSYFHKI 45
Score = 36.6 bits (83), Expect(3) = 3e-08
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLK 42
+ ++ PI LCNV+YK+ISK + N LK
Sbjct: 133 VTEFCPISLCNVLYKIISKVLANMLK 158
Score = 32.3 bits (72), Expect(3) = 3e-08
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPIYILRIIDLS 98
+ + + YW+++ + L +L+ V+ FN T I LIPK+ P + +S
Sbjct: 83 IPALFYQLYWNIICYDICQLCLDVLDGSDGVAYFNHTMIALIPKVNSPSRVTEFCPIS 140
>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
Length = 381
Score = 44.3 bits (103), Expect(2) = 4e-08
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPI 125
L++ + YW ++G V V N G S N TN+CLIPKI +PI
Sbjct: 253 LTASFYQTYWDIVGPAVVEEVRHFFNTGEFYSDLNHTNLCLIPKITNPI 301
Score = 41.6 bits (96), Expect(2) = 4e-08
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = -3
Query: 125 IYIKDYRPIGLCNVIYKLISKTIVNTLKSII 33
I +KD+RPI LCNV+YK+ISK + +KSI+
Sbjct: 301 ITMKDFRPIALCNVMYKIISKILSLCMKSIL 331
>gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 839
Score = 43.1 bits (100), Expect(2) = 7e-08
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSII 33
IKD RPI +CNV+YK++SK + N LK I+
Sbjct: 379 IKDLRPISVCNVLYKIVSKVLANRLKKIL 407
Score = 42.0 bits (97), Expect(2) = 7e-08
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIK 134
+ + + +W ++G+K+T+ V ILN G +N+T I LIPK+K
Sbjct: 329 MPAVFYKNFWDLMGEKITSEVQEILNGGQIPQEWNETTIVLIPKVK 374
>ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786154 [Setaria italica]
Length = 720
Score = 43.5 bits (101), Expect(2) = 7e-08
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 128
+SS + K+W+++G V VL LN G + +N+T + LIPK+++P
Sbjct: 460 MSSLFYKKHWNIVGADVVREVLNFLNDGSMPAKWNETVVVLIPKVQNP 507
Score = 41.6 bits (96), Expect(2) = 7e-08
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSIILNI 24
+KD RPI LCNVIYK+ SK + N LK I+ I
Sbjct: 510 LKDLRPISLCNVIYKITSKVLSNRLKLILPEI 541
>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
Length = 1503
Score = 43.1 bits (100), Expect(2) = 9e-08
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 259 YLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPIYI 119
+ K+W +G +V N+VL LN+ FN TNI IPK+ P+ +
Sbjct: 794 FYQKFWPTIGSEVCNSVLDFLNNRKCFRKFNHTNIVFIPKVSDPVEV 840
Score = 41.6 bits (96), Expect(2) = 9e-08
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = -3
Query: 125 IYIKDYRPIGLCNVIYKLISKTIVNTLKSIILNI 24
+ + YRPI LCNVIYK+ SK I N LK + I
Sbjct: 838 VEVAHYRPISLCNVIYKMASKCITNRLKEFVSEI 871
>gb|EMJ25951.1| hypothetical protein PRUPE_ppa024202mg [Prunus persica]
Length = 1106
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1
Query: 277 NLLSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 128
N + + + +YW ++GD V++ L ILN G V FN T I LIPKI P
Sbjct: 559 NGMPALFYQRYWHIVGDSVSDACLRILNGEGSVRDFNHTLIALIPKIAQP 608
Score = 38.1 bits (87), Expect(2) = 1e-07
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSII 33
+ D+RPI LC V+YKLI+K+ N L+ ++
Sbjct: 611 VTDFRPISLCTVLYKLIAKSFANRLEMVL 639
>ref|XP_002461653.1| hypothetical protein SORBIDRAFT_02g005970 [Sorghum bicolor]
gi|241925030|gb|EER98174.1| hypothetical protein
SORBIDRAFT_02g005970 [Sorghum bicolor]
Length = 172
Score = 43.9 bits (102), Expect(2) = 1e-07
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 128
L + + ++W+MLGD + VLG +N S +NDT I +IPK+++P
Sbjct: 32 LHAIFYKRFWNMLGDDLVVQVLGAVNSATIPSGWNDTMIVMIPKVENP 79
Score = 40.4 bits (93), Expect(2) = 1e-07
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSIILNI 24
+ +RPI LCNV+YK+ISK + N +K I+ I
Sbjct: 82 VAQFRPISLCNVVYKVISKMLANRMKGILEEI 113
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 45.1 bits (105), Expect(2) = 2e-07
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPIYI--LRIIDL 101
+ + + +W ++G KVT+ VL ILN G +N+T I LIPK+K P I LR I L
Sbjct: 700 MPAVFYKNFWDVVGGKVTSEVLDILNGGQMPLGWNETTIVLIPKVKQPEQIKDLRPISL 758
Score = 38.5 bits (88), Expect(2) = 2e-07
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSIILNI 24
IKD RPI L NV+YK++SK + N +K ++ ++
Sbjct: 750 IKDLRPISLRNVLYKIVSKVLANRVKKVLPDV 781
>gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
Length = 915
Score = 45.1 bits (105), Expect(2) = 2e-07
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPIYI--LRIIDL 101
+ + + +W ++G KVT+ VL ILN G +N+T I LIPK+K P I LR I L
Sbjct: 663 MPAVFYKNFWDVVGGKVTSEVLDILNGGQMPLGWNETTIVLIPKVKQPEQIKDLRPISL 721
Score = 38.5 bits (88), Expect(2) = 2e-07
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -3
Query: 119 IKDYRPIGLCNVIYKLISKTIVNTLKSIILNI 24
IKD RPI L NV+YK++SK + N +K ++ ++
Sbjct: 713 IKDLRPISLRNVLYKIVSKVLANRVKKVLPDV 744
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 42.7 bits (99), Expect(2) = 3e-07
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = -1
Query: 259 YLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 128
+ ++W ++GD VT+ + IL+ S N+TNI LIPK+K+P
Sbjct: 459 FYQRFWHIVGDDVTSFISNILHGHSSPSCVNNTNIALIPKVKNP 502
Score = 40.4 bits (93), Expect(2) = 3e-07
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -3
Query: 113 DYRPIGLCNVIYKLISKTIVNTLKSIILNI 24
++RPI LCNV+YKL+SK IV LKS + I
Sbjct: 507 EFRPIALCNVLYKLMSKAIVMRLKSFLPEI 536
>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1365
Score = 42.4 bits (98), Expect(2) = 3e-07
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3
Query: 110 YRPIGLCNVIYKLISKTIVNTLKSIILNI 24
+RPI LCNVIYK+ISK I N LK I+ +I
Sbjct: 517 FRPISLCNVIYKIISKIIANRLKPILKSI 545
Score = 40.4 bits (93), Expect(2) = 3e-07
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 128
+ + + K+WS++G+ + V G + +N TNICLIPK++ P
Sbjct: 464 IPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQTNICLIPKVERP 511
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 43.9 bits (102), Expect(2) = 4e-07
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = -1
Query: 271 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSP--FNDTNICLIPKIKHP 128
+ + + K+W ++GD VT V IL+ G +SP N TNI LIPK+K+P
Sbjct: 455 MHAIFYQKFWHIIGDDVTQFVSSILH--GSISPSCINHTNIALIPKVKNP 502
Score = 38.5 bits (88), Expect(2) = 4e-07
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -3
Query: 113 DYRPIGLCNVIYKLISKTIVNTLKSII 33
++RPI LCNV+YKL+SK +V LK +
Sbjct: 507 EFRPIALCNVVYKLVSKALVIRLKDFL 533