BLASTX nr result
ID: Catharanthus23_contig00015282
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00015282
(1539 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697... 75 2e-34
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi... 79 1e-33
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 74 6e-31
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 74 6e-31
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 64 6e-25
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660... 73 8e-25
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 75 2e-23
gb|ABA94321.1| retrotransposon protein, putative, unclassified [... 57 2e-22
emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera] 59 2e-22
emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group] 57 5e-22
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ... 54 9e-22
emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera] 110 2e-21
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 58 3e-21
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 58 3e-21
emb|CBI36090.3| unnamed protein product [Vitis vinifera] 68 1e-20
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 68 6e-20
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 47 1e-17
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 47 1e-17
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 47 1e-17
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 47 1e-17
>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
putative protein [Arabidopsis thaliana]
Length = 1415
Score = 75.5 bits (184), Expect(3) = 2e-34
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Frame = -2
Query: 1325 KSQIFPHAFVKILKTG*KSISQKN*KFSVLGSGEFNSNPFLNHISDLGIQLQVSCPGTPE 1146
KS F F+ K QK F G GEF SN F++H+++ GI+ +SCP TP+
Sbjct: 523 KSDFFS-VFLTFQKMVENQCQQKIASFQCDGGGEFISNQFVSHLAECGIRQLISCPYTPQ 581
Query: 1145 QNGFVERKYKHMVKTGLTILFDANLHLFLLD*GISYCLLSHQQNAFWNSSKYITTFP--- 975
QNG ERK++H+ + G +++F + FL AF+ S+ P
Sbjct: 582 QNGIAERKHRHITELGSSMMFQGKVPQFL------------WVEAFYTSNFLCNLLPSSV 629
Query: 974 ----------IVCKDPDYNNLPVFGSLCFPSL 909
++ K P Y +L VFG C+P+L
Sbjct: 630 LKDQKSPYEVLMGKAPVYTSLRVFGCACYPNL 661
Score = 72.4 bits (176), Expect(3) = 2e-34
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = -1
Query: 1536 QSKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDH 1357
++ S+C Q GK CKLP + ++ + L+++H DL APV S+QG +YVIFI ++
Sbjct: 452 KTSHSLCDACQMGKICKLPFASSDFVSSRLLERVHCDLWGPAPVVSSQGFRYYVIFIDNY 511
Query: 1356 SRFN*LYPLRKKSNFSSCF 1300
SRF YPLR KS+F S F
Sbjct: 512 SRFTWFYPLRLKSDFFSVF 530
Score = 47.4 bits (111), Expect(3) = 2e-34
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -1
Query: 885 CVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKFFYLPSY 763
CVF GYN +K Y C+ T +YI+RH++FDESKF + Y
Sbjct: 676 CVFTGYNEKYKGYKCFHPPTGKIYINRHVLFDESKFLFSDIY 717
Score = 48.9 bits (115), Expect(2) = 4e-08
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = -2
Query: 260 ALKNPRWLEAMKEELEALHSNRT*SLVLRPT-ITNVCSKWVFRVKQK*GISLARLKACLV 84
ALK+P W +AM EE ++ T LV + IT + +WVF+ K K +L RLKA LV
Sbjct: 884 ALKDPGWTDAMGEEYDSFEETHTWDLVPPDSFITPLGCRWVFKTKLKADGTLDRLKARLV 943
Query: 83 AQGFSQ 66
A+G+ Q
Sbjct: 944 AKGYEQ 949
Score = 37.0 bits (84), Expect(2) = 4e-08
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3
Query: 79 KVSVKSLDVKNAFLHEELKELVHMKQ 2
K +K LDVKNAFLH +LKE V+M Q
Sbjct: 979 KWEIKQLDVKNAFLHGDLKETVYMYQ 1004
>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1149
Score = 78.6 bits (192), Expect(3) = 1e-33
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Frame = -2
Query: 1235 GSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL-HLFL 1059
G GEF SN FL H+ + GIQ +SCP TP+QNG ERK++ + + GLT++F + F
Sbjct: 574 GGGEFTSNRFLQHLQESGIQHYISCPHTPQQNGLAERKHRQLTERGLTLMFQSKAPQRFW 633
Query: 1058 LD*GISYCLLSHQQNAFWNSSKYITTFP---IVCKDPDYNNLPVFGSLCFPSL 909
++ ++ + N S+ +T P + K PDY+ L FG CFP+L
Sbjct: 634 VE---AFFTANFLSNLLPTSALDSSTTPYQVLFGKAPDYSALRTFGCACFPTL 683
Score = 67.0 bits (162), Expect(3) = 1e-33
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = -1
Query: 1536 QSKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDH 1357
+S +C + GKS +LP ++ I PL+++H DL APV+S QG +YVIFI +
Sbjct: 474 KSTSKMCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQYYVIFIDNR 533
Query: 1356 SRFN*LYPLRKKSNFSSCF 1300
SRF YPL+ KS+F S F
Sbjct: 534 SRFCWFYPLKHKSDFCSLF 552
Score = 47.0 bits (110), Expect(3) = 1e-33
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = -1
Query: 885 CVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKFFYLPSY 763
C+F+GY +K Y C+ TN +Y+SRH++FDES F ++ +Y
Sbjct: 698 CIFLGYTEKYKGYRCFFPPTNRVYLSRHVLFDESSFPFIDTY 739
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 73.6 bits (179), Expect(3) = 6e-31
Identities = 39/98 (39%), Positives = 59/98 (60%)
Frame = -1
Query: 1536 QSKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDH 1357
++ ++C Q GK C+LP + + PL++IH DL APVTS QG +YVIFI ++
Sbjct: 483 KTSSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDNY 542
Query: 1356 SRFN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1243
SRF YPL+ KS+F S F F+ ++ + K+ +F
Sbjct: 543 SRFTWFYPLKLKSDFFSVFVL-FQQLVENQYQHKIAMF 579
Score = 65.1 bits (157), Expect(3) = 6e-31
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = -2
Query: 1247 FSVLGSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL- 1071
F G GEF S F+ H++ GI+ +SCP TP+QNG ER+++++ + GL+++F + +
Sbjct: 579 FQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQQNGIAERRHRYLTELGLSLMFHSKVP 638
Query: 1070 HLFLLD*GISYCLLSHQQNAFWNSSKYITTFPIVCKDPDYNNLPVFGSLCFPSLHQGGK 894
H ++ + LS+ + S + P Y L VFGS C+P L K
Sbjct: 639 HKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLHGTPPVYTALRVFGSACYPYLRPYAK 697
Score = 44.7 bits (104), Expect(3) = 6e-31
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -1
Query: 885 CVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKFFYLPSYQR 757
CVF+GYN +K Y C T +YI RH++FDE KF Y Y +
Sbjct: 707 CVFLGYNNKYKGYRCLHPPTGKVYICRHVLFDERKFPYSDIYSQ 750
Score = 46.2 bits (108), Expect(2) = 4e-08
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = -2
Query: 260 ALKNPRWLEAMKEELEALHSNRT*SLVLRPTITNVCS-KWVFRVKQK*GISLARLKACLV 84
ALK+ W AM EE+ +H T LV + + KWVF+ K SL RLKA LV
Sbjct: 926 ALKDEGWTNAMGEEMGTMHETDTWDLVPPEMVDRLLGCKWVFKTKLNSDGSLDRLKARLV 985
Query: 83 AQGFSQ 66
A+G+ Q
Sbjct: 986 ARGYEQ 991
Score = 39.7 bits (91), Expect(2) = 4e-08
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -3
Query: 79 KVSVKSLDVKNAFLHEELKELVHMKQ 2
K S+K LDVKNAFLH+ELKE V M Q
Sbjct: 1021 KWSLKQLDVKNAFLHDELKETVFMTQ 1046
>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
Length = 1392
Score = 73.6 bits (179), Expect(3) = 6e-31
Identities = 39/98 (39%), Positives = 59/98 (60%)
Frame = -1
Query: 1536 QSKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDH 1357
++ ++C Q GK C+LP + + PL++IH DL APVTS QG +YVIFI ++
Sbjct: 486 KTSSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDNY 545
Query: 1356 SRFN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1243
SRF YPL+ KS+F S F F+ ++ + K+ +F
Sbjct: 546 SRFTWFYPLKLKSDFFSVFVL-FQQLVENQYQHKIAMF 582
Score = 65.1 bits (157), Expect(3) = 6e-31
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = -2
Query: 1247 FSVLGSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL- 1071
F G GEF S F+ H++ GI+ +SCP TP+QNG ER+++++ + GL+++F + +
Sbjct: 582 FQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQQNGIAERRHRYLTELGLSLMFHSKVP 641
Query: 1070 HLFLLD*GISYCLLSHQQNAFWNSSKYITTFPIVCKDPDYNNLPVFGSLCFPSLHQGGK 894
H ++ + LS+ + S + P Y L VFGS C+P L K
Sbjct: 642 HKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLHGTPPVYTALRVFGSACYPYLRPYAK 700
Score = 44.7 bits (104), Expect(3) = 6e-31
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -1
Query: 885 CVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKFFYLPSYQR 757
CVF+GYN +K Y C T +YI RH++FDE KF Y Y +
Sbjct: 710 CVFLGYNNKYKGYRCLHPPTGKVYICRHVLFDERKFPYSDIYSQ 753
Score = 46.6 bits (109), Expect(2) = 3e-08
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Frame = -2
Query: 329 LDRIKLVNPKIFAGL*LMSHHTA------ALKNPRWLEAMKEELEALHSNRT*SLVLRPT 168
L RI NPK +A + S++ ALK+ W AM EE+ +H T LV
Sbjct: 775 LSRITKPNPK-YALFSVKSNYPEPKSVKEALKDEGWTNAMGEEMGTMHETDTWDLVPPEM 833
Query: 167 ITNVCS-KWVFRVKQK*GISLARLKACLVAQGFSQ 66
+ + KWVF+ K SL RLKA LVA+G+ Q
Sbjct: 834 VDRLLGCKWVFKTKLNSDGSLDRLKARLVARGYEQ 868
Score = 39.7 bits (91), Expect(2) = 3e-08
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -3
Query: 79 KVSVKSLDVKNAFLHEELKELVHMKQ 2
K S+K LDVKNAFLH+ELKE V M Q
Sbjct: 898 KWSLKQLDVKNAFLHDELKETVFMTQ 923
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 63.9 bits (154), Expect(3) = 6e-25
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Frame = -2
Query: 1229 GEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL--HLFLL 1056
GEF + F ++++ GI+ Q SCP TPEQNG ERK +H+++TGL +L A+L +L
Sbjct: 649 GEFKA--FSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLY 706
Query: 1055 D*GISYCLLSHQQNAFWNSSKYITTFPIVC-KDPDYNNLPVFGSLCFPSLHQGGK 894
+ L++ N Y + F I+ K P+Y+ +FG LC+P + K
Sbjct: 707 AFHTAIFLINRLPTKVLN---YQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNK 758
Score = 57.8 bits (138), Expect(3) = 6e-25
Identities = 30/94 (31%), Positives = 49/94 (52%)
Frame = -1
Query: 1530 KRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSR 1351
K ++C QF KS KLP ++ PL +H DL + S G ++++F+ D SR
Sbjct: 549 KNNVCCACQFAKSHKLPFNVXVSRASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSR 608
Query: 1350 FN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLK 1249
F+ +YPL K S F + FK ++ F +++
Sbjct: 609 FSWIYPLHSKDQALSVFIK-FKSLVENQFNSRIQ 641
Score = 41.2 bits (95), Expect(3) = 6e-25
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = -1
Query: 885 CVFIGYNLLHKAYGCYD-LSTNMYISRHIVFDESKF 781
CVF+GY+ HK Y C + L+ +Y++RH+VF E+ F
Sbjct: 768 CVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVF 803
>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
Length = 868
Score = 73.2 bits (178), Expect(3) = 8e-25
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = -2
Query: 1235 GSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLL 1056
G GEF PF +++DLGI + +CP T QNG VERK+++ V+TGL +L + L L
Sbjct: 695 GGGEFR--PFTKYLNDLGIVHRFTCPHTHHQNGIVERKHRYTVETGLALLAQSTLPLKFW 752
Query: 1055 D*GI---SYCLLSHQQNAFWNSSKYITTFPIVCKDPDYNNLPVFGSLCFPSL 909
D +Y + + N S Y F ++ K PDY+ L VFG CFP L
Sbjct: 753 DHSFVTAAYLINRLPSVSLNNQSLY---FKLLNKQPDYSCLRVFGCSCFPFL 801
Score = 45.1 bits (105), Expect(3) = 8e-25
Identities = 29/91 (31%), Positives = 49/91 (53%)
Frame = -1
Query: 1521 ICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN* 1342
+C+ GKS +LP SL+ + P + + DL AP+ S G ++++ + SRF
Sbjct: 600 LCSACCLGKSHRLPTSLSATVYSQPFELVVCDLWGPAPMQSLGGYNYFLTCVDAFSRFVW 659
Query: 1341 LYPLRKKSNFSSCFCQNFKDWLKINFTEKLK 1249
++PLR KS+ F Q FK +++ F +K
Sbjct: 660 VFPLRLKSDTLPQFIQ-FKKMVELQFNYPIK 689
Score = 44.3 bits (103), Expect(3) = 8e-25
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = -1
Query: 885 CVFIGYNLLHKAYGCYDLSTNMYISRHIVFDESKFFY 775
C+F+GY+ HK Y C + ++YIS+ ++F ESKF Y
Sbjct: 816 CIFLGYSTAHKGYKCLAPNGHIYISKDVLFQESKFPY 852
>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2301
Score = 75.1 bits (183), Expect(2) = 2e-23
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Frame = -2
Query: 1247 FSVLGSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL- 1071
F G GEF SN FL H+ GIQ +SCP TP+QNG ER+++H+V+ GL++LF +
Sbjct: 586 FQCDGGGEFISNQFLLHLQKNGIQQLLSCPHTPQQNGLAERRHRHIVELGLSLLFQSRAP 645
Query: 1070 HLFLLD*GISYCLLSHQQNAFWNSSKYITTFP---IVCKDPDYNNLPVFGSLCFPSL 909
+ ++ ++ + N +S+ T P + K P Y+ L +FG CFP L
Sbjct: 646 QKYWVE---AFMTANFLSNLLPHSANTNTASPYEKLHNKSPSYDALRIFGCACFPML 699
Score = 62.8 bits (151), Expect(2) = 2e-23
Identities = 30/76 (39%), Positives = 48/76 (63%)
Frame = -1
Query: 1527 RSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRF 1348
+S+C Q KS +LP S + + PL++IH D+ +PV S Q +YV+ I ++SR+
Sbjct: 493 KSLCVSCQMAKSSRLPFSASQFVATRPLERIHCDVWGPSPVVSVQEFKYYVVLIDNYSRY 552
Query: 1347 N*LYPLRKKSNFSSCF 1300
+YP++KKS+F S F
Sbjct: 553 CWMYPMKKKSDFHSIF 568
>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1133
Score = 56.6 bits (135), Expect(4) = 2e-22
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = -2
Query: 1226 EFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFL 1059
E+ +N F++++SD GI Q +CPGTP QNG ERK +H+++ +++F N+ +L
Sbjct: 370 EYINNEFVSYVSDEGIIHQTTCPGTPPQNGVAERKNRHLLEVARSLMFQMNVPKYL 425
Score = 46.2 bits (108), Expect(4) = 2e-22
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = -1
Query: 1527 RSICTGYQFGK---SCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDH 1357
R +C + GK S + + L N C+ P IH D+ + PVTS G ++V FI H
Sbjct: 270 RLVCDACELGKHTRSTYVGIGLRN--CE-PFILIHSDVWEPCPVTSVSGFKWFVTFIDCH 326
Query: 1356 SRFN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKI 1246
+R +Y L+ KS CF Q+F + F K+KI
Sbjct: 327 TRMTWIYMLKHKSEVLRCF-QDFHKLVTTQFDAKVKI 362
Score = 37.0 bits (84), Expect(4) = 2e-22
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -3
Query: 1063 FYWIEAFLIASYLINRMPSGILQNTSPHSQLFAK 962
+ W EA + A+YLINRMPS IL SP L K
Sbjct: 424 YLWSEAVMTAAYLINRMPSRILGMKSPAELLLGK 457
Score = 33.9 bits (76), Expect(4) = 2e-22
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -1
Query: 927 FMFSFSTSRGKIYP----CVFIGYNLLHKAYGCYD-LSTNMYISRHIVFDESKFFY 775
F+ S GK+ P CVF+GY K Y C+D + +++S + F E + +Y
Sbjct: 472 FVRDHRPSVGKLDPHAVKCVFVGYASSQKGYKCWDPIERRLFVSMDVTFREFEPYY 527
Score = 56.2 bits (134), Expect(2) = 5e-08
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = -2
Query: 260 ALKNPRWLEAMKEELEALHSNRT*SLV-LRPTITNVCSKWVFRVKQK*GISLARLKACLV 84
A ++P+W +AMKEEL AL N+T LV L P V KWVF VKQ + R KA LV
Sbjct: 749 AKQDPKWKDAMKEELNALVKNKTWELVKLPPEKRTVGCKWVFTVKQTPEGKVDRYKARLV 808
Query: 83 AQGFSQ 66
A+G+SQ
Sbjct: 809 AKGYSQ 814
Score = 29.3 bits (64), Expect(2) = 5e-08
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -3
Query: 61 LDVKNAFLHEELKELVHMK 5
LDVKNAFLH +L E V+M+
Sbjct: 850 LDVKNAFLHGDLHEEVYME 868
>emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera]
Length = 1380
Score = 59.3 bits (142), Expect(3) = 2e-22
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Frame = -2
Query: 1229 GEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD* 1050
GEF S F++ + +GI + SCP QNG VERK++H+V+TGL +L A+L +
Sbjct: 408 GEFRS--FMSFLQAVGIAHRFSCPYNLAQNGRVERKHRHVVETGLALLSHASLPM----- 460
Query: 1049 GISYCLLSHQQNAFWNSS------KYITT-FPIVCKDPDYNNLPVFGSLCFP 915
Y + Q + F + KY + F + K DY +L VFG LC+P
Sbjct: 461 --KYWHYAFQTSTFLINGMPSKVLKYDSPYFTLFRKHLDYKSLRVFGCLCYP 510
Score = 50.1 bits (118), Expect(3) = 2e-22
Identities = 28/94 (29%), Positives = 49/94 (52%)
Frame = -1
Query: 1530 KRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSR 1351
K +C+ Q KS +LP L+N PL+ ++ D+ A + S G ++++F+ D+SR
Sbjct: 308 KSIVCSDCQLAKSHRLPTQLSNFRASKPLELVYIDIWGPASIKSTSGAKYFILFVDDYSR 367
Query: 1350 FN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLK 1249
+ Y L+ K F + FK ++ F K+K
Sbjct: 368 YIWFYSLQTKDQALPIF-KRFKLQMENQFDTKIK 400
Score = 44.7 bits (104), Expect(3) = 2e-22
Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = -1
Query: 885 CVFIGYNLLHKAYGCYDLST-NMYISRHIVFDESKF 781
C+F+GY+L HK + C D +T +YI+ H+VFDES F
Sbjct: 527 CLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTF 562
>emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]
Length = 1045
Score = 56.6 bits (135), Expect(4) = 5e-22
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = -2
Query: 1226 EFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFL 1059
E+ +N F++++SD GI Q +CPGTP QNG ERK +H+++ +++F N+ +L
Sbjct: 539 EYINNEFVSYVSDEGIIHQTTCPGTPPQNGVAERKNRHLLEVARSLMFQMNVPKYL 594
Score = 45.1 bits (105), Expect(4) = 5e-22
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = -1
Query: 1527 RSICTGYQFGK---SCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDH 1357
R +C + GK S + + L N C+ P IH D+ PVTS G ++V FI H
Sbjct: 439 RLVCDACELGKHTRSTYVGIGLRN--CE-PFILIHSDVWGPCPVTSVSGFKWFVTFIDCH 495
Query: 1356 SRFN*LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKI 1246
+R +Y L+ KS CF Q+F + F K+KI
Sbjct: 496 TRMTWIYMLKHKSEVLRCF-QDFHKLVTTQFDAKVKI 531
Score = 37.0 bits (84), Expect(4) = 5e-22
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -3
Query: 1063 FYWIEAFLIASYLINRMPSGILQNTSPHSQLFAK 962
+ W EA + A+YLINRMPS IL SP L K
Sbjct: 593 YLWSEAVMTAAYLINRMPSRILGMKSPAELLLGK 626
Score = 33.9 bits (76), Expect(4) = 5e-22
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -1
Query: 927 FMFSFSTSRGKIYP----CVFIGYNLLHKAYGCYD-LSTNMYISRHIVFDESKFFY 775
F+ S GK+ P CVF+GY K Y C+D + +++S + F E + +Y
Sbjct: 641 FVRDHRPSVGKLDPHAVKCVFVGYASSQKGYKCWDPIERRLFVSMDVTFREFEPYY 696
Score = 53.1 bits (126), Expect(2) = 4e-07
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = -2
Query: 260 ALKNPRWLEAMKEELEALHSNRT*SLV-LRPTITNVCSKWVFRVKQK*GISLARLKACLV 84
A ++P+W +AMKEEL L N+T LV L P V KWVF VKQ + R KA LV
Sbjct: 918 AKQDPKWKDAMKEELNDLVKNKTWELVKLPPEKRAVGCKWVFTVKQTPEGKVDRYKARLV 977
Query: 83 AQGFSQ 66
A+G+SQ
Sbjct: 978 AKGYSQ 983
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -3
Query: 61 LDVKNAFLHEELKELVHMK 5
LDVKNAFLH +L E V+M+
Sbjct: 1019 LDVKNAFLHGDLHEEVYME 1037
>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group] gi|78708691|gb|ABB47666.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1682
Score = 53.9 bits (128), Expect(3) = 9e-22
Identities = 27/93 (29%), Positives = 49/93 (52%)
Frame = -1
Query: 1521 ICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN* 1342
+C G + GK +LP + P +H D+ +P S G ++YVIF+ D+SR+
Sbjct: 356 VCKGCKLGKQVQLPYPSSTSRSSRPFDLVHSDVWGKSPFPSKGGHNYYVIFVDDYSRYTW 415
Query: 1341 LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1243
+Y ++ +S S + Q+F + F+ ++IF
Sbjct: 416 IYFMKHRSQLISIY-QSFAQMIHTQFSSAIRIF 447
Score = 51.2 bits (121), Expect(3) = 9e-22
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = -2
Query: 1229 GEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD* 1050
GE+ SN F + G Q+SCPG QNG ERK++H+++T T+L + +
Sbjct: 453 GEYMSNAFREFLVSQGTLPQLSCPGAHAQNGVAERKHRHIIETARTLLIASFVPAHFWAE 512
Query: 1049 GIS---YCLLSHQQNAFWNSSKYITTFPIVCKDPDYNNLPVFGSLCF 918
IS Y + ++ S F P Y++L VFG C+
Sbjct: 513 AISTAVYLINMQPSSSLQGRSPGEVLFG---SPPRYDHLRVFGCTCY 556
Score = 47.0 bits (110), Expect(3) = 9e-22
Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = -1
Query: 885 CVFIGYNLLHKAYGCYDLST-NMYISRHIVFDESK-FFYLPSYQ 760
CVF+GY+L HK Y CYD S + ISR + FDE+K FFY + Q
Sbjct: 574 CVFLGYSLEHKGYRCYDPSARRIRISRDVTFDENKPFFYSSTNQ 617
>emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]
Length = 1884
Score = 110 bits (274), Expect = 2e-21
Identities = 88/271 (32%), Positives = 121/271 (44%), Gaps = 27/271 (9%)
Frame = -1
Query: 1506 QFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN*LYPLR 1327
+ GKSCKLP L NKI PL KIH DL AP S QG +Y +FI DH+R+ LYPLR
Sbjct: 442 ELGKSCKLPFGLRNKISSNPLDKIHCDLWGXAPNNSTQGYKYYXVFIDDHTRYTWLYPLR 501
Query: 1326 KKSNFSSCFCQNFKDWLKINFTEKLKIFSVREWRI*LKSVS*SY**PWYSITGFMSRNTR 1147
+KS+F CF + F+ ++ ++KIF +N
Sbjct: 502 RKSDFFECFLK-FQILVENQLERRIKIFQSDGGG---------------EFQSIKFQNHL 545
Query: 1146 TKWLCRTKIQTYG--------ENWLNHIV*CQLTSVFIGLRHFLLPLISSTECLLEFFKI 991
+K ++ G E HIV LT +F + LPL + L +
Sbjct: 546 SKCGILQQVSCPGTPEQNGVAERKHRHIVEMGLTMLF----NAKLPLSLWVDAFLTAVYL 601
Query: 990 HHHIPNCL------------QRS*LQQLASFWIFMFSFSTSRG------KIYPCVFIGYN 865
+ +P+ + Q + L F F + G K YPCVFIGY+
Sbjct: 602 INRLPSTVLKMESPFFMLFKQYPEYRSLRIFGCQCFPYLRDYGKNKFSPKTYPCVFIGYS 661
Query: 864 LLHKAYGCYDLST-NMYISRHIVFDESKFFY 775
LHK Y C ST +YISRH++F+E+ F Y
Sbjct: 662 SLHKGYRCLHPSTKRVYISRHVIFNENCFPY 692
Score = 69.7 bits (169), Expect(2) = 1e-12
Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = -2
Query: 269 HTAALKNPRWLEAMKEELEALHSNRT*SLVLRPTITNVC-SKWVFRVKQK*GISLARLKA 93
+ ALK P WL+AM+EE++AL NRT LV RP TN+ SKWVF+ K K ++ R KA
Sbjct: 924 YRTALKIPHWLKAMQEEIKALIQNRTWDLVPRPPTTNIVGSKWVFKTKLKEDGTIDRYKA 983
Query: 92 CLVAQGFSQV 63
LVA+GFSQ+
Sbjct: 984 RLVARGFSQI 993
Score = 31.6 bits (70), Expect(2) = 1e-12
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -3
Query: 70 VKSLDVKNAFLHEELKELVHMKQ 2
++ LDVKNAFLH LKE V M+Q
Sbjct: 1025 MRQLDVKNAFLHGFLKEEVFMEQ 1047
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 58.2 bits (139), Expect(3) = 3e-21
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Frame = -2
Query: 1229 GEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD* 1050
GEF + F ++ GI Q SCP TP+QNG ERK +H+V+TGL ++
Sbjct: 609 GEFLA--FKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQ---------- 656
Query: 1049 GISYCLLSHQQNAFWNSSKYITTFP------------IVCKDPDYNNLPVFGSLCFPSL 909
S+ + AF + I P + K P+Y++L VFG LCFPSL
Sbjct: 657 --SFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSL 713
Score = 47.0 bits (110), Expect(3) = 3e-21
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = -1
Query: 885 CVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKF 781
CVF+GY HK Y C D+STN +YISR+++F ES F
Sbjct: 728 CVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSF 763
Score = 45.1 bits (105), Expect(3) = 3e-21
Identities = 29/78 (37%), Positives = 38/78 (48%)
Frame = -1
Query: 1533 SKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHS 1354
+K + C KS LP SL++ PL IH DL AP TS G +++IFI D+S
Sbjct: 508 NKIAPCIICPLAKSHSLPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYS 567
Query: 1353 RFN*LYPLRKKSNFSSCF 1300
R +Y L K F
Sbjct: 568 RHTWIYFLSTKDQALQSF 585
Score = 52.0 bits (123), Expect(2) = 7e-07
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -2
Query: 269 HTAALKNPRWLEAMKEELEALHSNRT*SLVLRPTITNVCS-KWVFRVKQK*GISLARLKA 93
++ A KN W++AM E +AL N T SLV P+ ++ +W++++K + S+ R KA
Sbjct: 862 YSQASKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKA 921
Query: 92 CLVAQGFSQ 66
LVAQGF+Q
Sbjct: 922 RLVAQGFTQ 930
Score = 29.6 bits (65), Expect(2) = 7e-07
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -3
Query: 73 SVKSLDVKNAFLHEELKELVHMKQ 2
SV+ LDV+NAFL+ +L+E V M Q
Sbjct: 962 SVRQLDVENAFLNGDLEEEVFMTQ 985
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 58.2 bits (139), Expect(3) = 3e-21
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Frame = -2
Query: 1229 GEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD* 1050
GEF + F ++ GI Q SCP TP+QNG ERK +H+V+TGL ++
Sbjct: 609 GEFLA--FKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQ---------- 656
Query: 1049 GISYCLLSHQQNAFWNSSKYITTFP------------IVCKDPDYNNLPVFGSLCFPSL 909
S+ + AF + I P + K P+Y++L VFG LCFPSL
Sbjct: 657 --SFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSL 713
Score = 47.0 bits (110), Expect(3) = 3e-21
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = -1
Query: 885 CVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKF 781
CVF+GY HK Y C D+STN +YISR+++F ES F
Sbjct: 728 CVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSF 763
Score = 45.1 bits (105), Expect(3) = 3e-21
Identities = 29/78 (37%), Positives = 38/78 (48%)
Frame = -1
Query: 1533 SKRSICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHS 1354
+K + C KS LP SL++ PL IH DL AP TS G +++IFI D+S
Sbjct: 508 NKIAPCIICPLAKSHSLPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYS 567
Query: 1353 RFN*LYPLRKKSNFSSCF 1300
R +Y L K F
Sbjct: 568 RHTWIYFLSTKDQALQSF 585
Score = 52.4 bits (124), Expect(2) = 2e-06
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -2
Query: 269 HTAALKNPRWLEAMKEELEALHSNRT*SLVLRPTITNVCS-KWVFRVKQK*GISLARLKA 93
++ A KN W++AM E +AL N T SLV P+ ++ +W++++K + S+ R KA
Sbjct: 862 YSQAXKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKA 921
Query: 92 CLVAQGFSQ 66
LVAQGF+Q
Sbjct: 922 RLVAQGFTQ 930
Score = 28.1 bits (61), Expect(2) = 2e-06
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 73 SVKSLDVKNAFLHEELKELVHMKQ 2
SV+ LDV+N FL+ +L+E V M Q
Sbjct: 962 SVRQLDVENGFLNGDLEEEVFMTQ 985
>emb|CBI36090.3| unnamed protein product [Vitis vinifera]
Length = 1273
Score = 68.2 bits (165), Expect(2) = 1e-20
Identities = 39/94 (41%), Positives = 55/94 (58%)
Frame = -1
Query: 1524 SICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN 1345
S+C+ Q K+ +LP S N L IH DL +P+ SN G +YVIFI D+SRF
Sbjct: 1037 SLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLPGPSPIKSNSGFLYYVIFIDDYSRFT 1096
Query: 1344 *LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1243
LYPL+ KS+F F Q FK +++ ++K+F
Sbjct: 1097 WLYPLKFKSDFFDIFLQ-FKKFVENQHFARIKVF 1129
Score = 60.1 bits (144), Expect(2) = 1e-20
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = -2
Query: 1235 GSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL 1071
G EF + F H+ GI Q+SCP TP QNG ERK++H+ +TGLT+LF ++L
Sbjct: 1133 GGAEFTNTCFKAHLRTSGIHHQLSCPYTPAQNGRAERKHRHVTETGLTLLFHSHL 1187
>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 67.8 bits (164), Expect(2) = 6e-20
Identities = 38/94 (40%), Positives = 56/94 (59%)
Frame = -1
Query: 1524 SICTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN 1345
S+C+ Q K+ +LP S N L IH DL +P+ SN G +YVIFI D+SRF
Sbjct: 439 SLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYVIFIDDYSRFT 498
Query: 1344 *LYPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1243
LYPL+ KS+F F Q F+ +++ + ++K+F
Sbjct: 499 WLYPLKFKSDFFDIFLQ-FQKFVENQHSARIKVF 531
Score = 58.2 bits (139), Expect(2) = 6e-20
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = -2
Query: 1235 GSGEFNSNPFLNHISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANL 1071
G EF + F H+ GI Q+SCP TP QNG ERK++H+ +TGL +LF ++L
Sbjct: 535 GGAEFTNTCFKAHLRTSGIHHQLSCPYTPAQNGRAERKHRHVTETGLALLFHSHL 589
Score = 64.3 bits (155), Expect(2) = 3e-10
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = -2
Query: 263 AALKNPRWLEAMKEELEALHSNRT*SLVLRPTITNVC-SKWVFRVKQK*GISLARLKACL 87
+A KNP WL AM EE++AL N T LV RP TN+ SKWVFR K S+ RLKA L
Sbjct: 829 SAAKNPAWLAAMDEEVQALQQNGTWILVPRPVNTNIVGSKWVFRTKYLPDGSVERLKARL 888
Query: 86 VAQGFSQV 63
VA+G++ V
Sbjct: 889 VAKGYTXV 896
Score = 28.9 bits (63), Expect(2) = 3e-10
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -3
Query: 79 KVSVKSLDVKNAFLHEELKELVHMKQ 2
K ++ LDVKNAFL+ L E V+M+Q
Sbjct: 925 KWPLRQLDVKNAFLNGTLTEHVYMEQ 950
Score = 49.7 bits (117), Expect(2) = 4e-09
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Frame = -1
Query: 888 PCVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKFFYLPSYQR---*FLHL*NFL 730
PC+F+GY+ HK + C D +T+ +YI+RH FDE+ F +PS Q LH+ NFL
Sbjct: 657 PCIFLGYSPSHKGFRCLDPTTSRLYITRHAQFDETHFPTVPSSQAQPLSSLHISNFL 713
Score = 39.7 bits (91), Expect(2) = 4e-09
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 4/132 (3%)
Frame = -3
Query: 1351 FQLVVPLKEKVKFFLMLLSKF*RLAENQFHRKTKNFQC*GVENLTQIRFLIILVTLVFNY 1172
F + PLK K FF + L +F + ENQ + K FQ G T F L T ++
Sbjct: 497 FTWLYPLKFKSDFFDIFL-QFQKFVENQHSARIKVFQSDGGAEFTNTCFKAHLRTSGIHH 555
Query: 1171 RFHVQ--EHQNKMAL*NEN--TNIW*KLA*PYCLMPTYICFYWIEAFLIASYLINRMPSG 1004
+ QN A T L L P + W++AF A+Y+INR+P+
Sbjct: 556 QLSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSPRF----WVDAFSTATYIINRLPTP 611
Query: 1003 ILQNTSPHSQLF 968
+L SP L+
Sbjct: 612 LLGGKSPFELLY 623
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 47.4 bits (111), Expect(3) = 1e-17
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Frame = -2
Query: 1199 HISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD*GISYCLLSHQ 1020
+ S GI S P TPE NG ERK++H+V+TGLT+L A++ ++
Sbjct: 603 YFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP------------KTYW 650
Query: 1019 QNAFWNSSKYITTFP------------IVCKDPDYNNLPVFGSLCFPSL 909
AF + I P + P+Y+ L VFG C+P L
Sbjct: 651 PYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWL 699
Score = 46.2 bits (108), Expect(3) = 1e-17
Identities = 29/92 (31%), Positives = 48/92 (52%)
Frame = -1
Query: 1518 CTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN*L 1339
C+ KS K+P S + PL+ I+ D+ +P+ S+ +YVIF+ +R+ L
Sbjct: 500 CSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWL 558
Query: 1338 YPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1243
YPL++KS F FK+ L+ F ++ F
Sbjct: 559 YPLKQKSQVKETFI-TFKNLLENRFQTRIGTF 589
Score = 44.3 bits (103), Expect(3) = 1e-17
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -1
Query: 933 WIFMFSFSTSRGKIYPCVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKF 781
W+ ++ K CVF+GY+L AY C L T+ +YISRH+ FDE+ F
Sbjct: 698 WLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCF 749
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 47.4 bits (111), Expect(3) = 1e-17
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Frame = -2
Query: 1199 HISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD*GISYCLLSHQ 1020
+ S GI S P TPE NG ERK++H+V+TGLT+L A++ ++
Sbjct: 603 YFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP------------KTYW 650
Query: 1019 QNAFWNSSKYITTFP------------IVCKDPDYNNLPVFGSLCFPSL 909
AF + I P + P+Y+ L VFG C+P L
Sbjct: 651 PYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWL 699
Score = 46.2 bits (108), Expect(3) = 1e-17
Identities = 29/92 (31%), Positives = 48/92 (52%)
Frame = -1
Query: 1518 CTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN*L 1339
C+ KS K+P S + PL+ I+ D+ +P+ S+ +YVIF+ +R+ L
Sbjct: 500 CSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWL 558
Query: 1338 YPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1243
YPL++KS F FK+ L+ F ++ F
Sbjct: 559 YPLKQKSQVKETFI-TFKNLLENRFQTRIGTF 589
Score = 44.3 bits (103), Expect(3) = 1e-17
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -1
Query: 933 WIFMFSFSTSRGKIYPCVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKF 781
W+ ++ K CVF+GY+L AY C L T+ +YISRH+ FDE+ F
Sbjct: 698 WLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCF 749
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 47.4 bits (111), Expect(3) = 1e-17
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Frame = -2
Query: 1199 HISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD*GISYCLLSHQ 1020
+ S GI S P TPE NG ERK++H+V+TGLT+L A++ ++
Sbjct: 603 YFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP------------KTYW 650
Query: 1019 QNAFWNSSKYITTFP------------IVCKDPDYNNLPVFGSLCFPSL 909
AF + I P + P+Y+ L VFG C+P L
Sbjct: 651 PYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWL 699
Score = 46.2 bits (108), Expect(3) = 1e-17
Identities = 29/92 (31%), Positives = 48/92 (52%)
Frame = -1
Query: 1518 CTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN*L 1339
C+ KS K+P S + PL+ I+ D+ +P+ S+ +YVIF+ +R+ L
Sbjct: 500 CSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWL 558
Query: 1338 YPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1243
YPL++KS F FK+ L+ F ++ F
Sbjct: 559 YPLKQKSQVKETFI-TFKNLLENRFQTRIGTF 589
Score = 44.3 bits (103), Expect(3) = 1e-17
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -1
Query: 933 WIFMFSFSTSRGKIYPCVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKF 781
W+ ++ K CVF+GY+L AY C L T+ +YISRH+ FDE+ F
Sbjct: 698 WLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCF 749
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 47.4 bits (111), Expect(3) = 1e-17
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Frame = -2
Query: 1199 HISDLGIQLQVSCPGTPEQNGFVERKYKHMVKTGLTILFDANLHLFLLD*GISYCLLSHQ 1020
+ S GI S P TPE NG ERK++H+V+TGLT+L A++ ++
Sbjct: 568 YFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP------------KTYW 615
Query: 1019 QNAFWNSSKYITTFP------------IVCKDPDYNNLPVFGSLCFPSL 909
AF + I P + P+Y+ L VFG C+P L
Sbjct: 616 PYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWL 664
Score = 46.2 bits (108), Expect(3) = 1e-17
Identities = 29/92 (31%), Positives = 48/92 (52%)
Frame = -1
Query: 1518 CTGYQFGKSCKLPLSLNNKICDFPLQKIH*DL*DLAPVTSNQGCHFYVIFIYDHSRFN*L 1339
C+ KS K+P S + PL+ I+ D+ +P+ S+ +YVIF+ +R+ L
Sbjct: 465 CSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWL 523
Query: 1338 YPLRKKSNFSSCFCQNFKDWLKINFTEKLKIF 1243
YPL++KS F FK+ L+ F ++ F
Sbjct: 524 YPLKQKSQVKETFI-TFKNLLENRFQTRIGTF 554
Score = 44.3 bits (103), Expect(3) = 1e-17
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -1
Query: 933 WIFMFSFSTSRGKIYPCVFIGYNLLHKAYGCYDLSTN-MYISRHIVFDESKF 781
W+ ++ K CVF+GY+L AY C L T+ +YISRH+ FDE+ F
Sbjct: 663 WLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCF 714