BLASTX nr result
ID: Catharanthus23_contig00015135
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00015135
(404 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI39646.3| unnamed protein product [Vitis vinifera] 86 5e-15
ref|XP_002318931.1| hypothetical protein POPTR_0013s00620g [Popu... 82 7e-14
ref|XP_004302306.1| PREDICTED: zinc finger CCCH domain-containin... 80 3e-13
ref|XP_004302307.1| PREDICTED: zinc finger CCCH domain-containin... 77 2e-12
gb|EMJ07490.1| hypothetical protein PRUPE_ppa016420mg [Prunus pe... 77 2e-12
gb|EOY11730.1| C2H2 and C2HC zinc fingers superfamily protein, p... 73 4e-11
ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containin... 72 6e-11
ref|XP_004967856.1| PREDICTED: zinc finger CCCH domain-containin... 71 1e-10
ref|XP_006428241.1| hypothetical protein CICLE_v10012993mg [Citr... 71 2e-10
sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-con... 70 2e-10
ref|XP_006344809.1| PREDICTED: zinc finger CCCH domain-containin... 69 8e-10
ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [S... 68 1e-09
ref|XP_004230342.1| PREDICTED: zinc finger CCCH domain-containin... 66 4e-09
ref|XP_003591237.1| Zinc finger matrin type 5 [Medicago truncatu... 66 4e-09
gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays] 64 2e-08
ref|XP_004495629.1| PREDICTED: zinc finger CCCH domain-containin... 64 3e-08
gb|ESW17024.1| hypothetical protein PHAVU_007G203900g [Phaseolus... 59 5e-07
gb|ESW17023.1| hypothetical protein PHAVU_007G203900g [Phaseolus... 59 5e-07
ref|NP_001190404.1| nucleic acid binding / zinc ion binding prot... 57 2e-06
ref|NP_001154741.1| nucleic acid binding / zinc ion binding prot... 57 2e-06
>emb|CBI39646.3| unnamed protein product [Vitis vinifera]
Length = 152
Score = 85.9 bits (211), Expect = 5e-15
Identities = 36/55 (65%), Positives = 43/55 (78%)
Frame = +1
Query: 1 DVQSQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
++QS PG Q++ LPGNV+ DS+G SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 98 NIQSLSNPGNQLVGGGPLPGNVVKDSMGNSWGNLPPSLKPPPEGGYPPLPFLDWG 152
>ref|XP_002318931.1| hypothetical protein POPTR_0013s00620g [Populus trichocarpa]
gi|222857307|gb|EEE94854.1| hypothetical protein
POPTR_0013s00620g [Populus trichocarpa]
Length = 150
Score = 82.0 bits (201), Expect = 7e-14
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +1
Query: 1 DVQSQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
+VQS +PG Q+ +S PG + +S+G SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 96 NVQSPTMPGNQLAGGSSFPGVAVRESMGMSWGNLPPSLKPPPEGGYPPLPFVDWG 150
>ref|XP_004302306.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform 1 [Fragaria vesca subsp. vesca]
Length = 150
Score = 80.1 bits (196), Expect = 3e-13
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +1
Query: 7 QSQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
QS + G Q++ +SLP V+ D++G SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 98 QSSTIQGNQMVAGSSLPDVVVRDNMGMSWGNLPPSLMPPPEGGYPPLPFVDWG 150
>ref|XP_004302307.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform 2 [Fragaria vesca subsp. vesca]
Length = 138
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = +1
Query: 10 SQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
+Q G Q++ +SLP V+ D++G SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 87 TQGASGNQMVAGSSLPDVVVRDNMGMSWGNLPPSLMPPPEGGYPPLPFVDWG 138
>gb|EMJ07490.1| hypothetical protein PRUPE_ppa016420mg [Prunus persica]
Length = 150
Score = 77.0 bits (188), Expect = 2e-12
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = +1
Query: 7 QSQFLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
QS Q++ +SLP V+ DS+G SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 98 QSSTFQENQLVGGSSLPDVVVRDSMGMSWGNLPPSLMPPPEGGYPPLPFVDWG 150
>gb|EOY11730.1| C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma
cacao]
Length = 133
Score = 72.8 bits (177), Expect = 4e-11
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +1
Query: 43 SASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
+A PG+V G IG SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 93 AAPAPGSVEGAGIGMSWGNLPPSLKPPPEGGYPPLPFVDWG 133
>ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Cucumis sativus] gi|449508616|ref|XP_004163363.1|
PREDICTED: zinc finger CCCH domain-containing protein
3-like [Cucumis sativus]
Length = 156
Score = 72.4 bits (176), Expect = 6e-11
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = +1
Query: 43 SASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
++S G+++ D +GTSWGNLPPSL PPP+ GYPPLPF+DWG
Sbjct: 116 NSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG 156
>ref|XP_004967856.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Setaria italica]
Length = 164
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +1
Query: 19 LPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
L G Q E S GNVLG +SWGNLPPSL PPPE GYPPLPF+DWG
Sbjct: 118 LVGYQAAERNSFSGNVLGAH--SSWGNLPPSLQPPPEGGYPPLPFVDWG 164
>ref|XP_006428241.1| hypothetical protein CICLE_v10012993mg [Citrus clementina]
gi|568853265|ref|XP_006480284.1| PREDICTED: zinc finger
CCCH domain-containing protein 3-like isoform X1 [Citrus
sinensis] gi|568853267|ref|XP_006480285.1| PREDICTED:
zinc finger CCCH domain-containing protein 3-like
isoform X2 [Citrus sinensis]
gi|568853269|ref|XP_006480286.1| PREDICTED: zinc finger
CCCH domain-containing protein 3-like isoform X3 [Citrus
sinensis] gi|568853271|ref|XP_006480287.1| PREDICTED:
zinc finger CCCH domain-containing protein 3-like
isoform X4 [Citrus sinensis] gi|557530298|gb|ESR41481.1|
hypothetical protein CICLE_v10012993mg [Citrus
clementina]
Length = 155
Score = 70.9 bits (172), Expect = 2e-10
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1
Query: 46 ASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
+S PG+++ DS+G SWGNLPPSL PPPE GYP LPF+DWG
Sbjct: 116 SSFPGDMMRDSMGMSWGNLPPSLKPPPEGGYPLLPFVDWG 155
>sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 3;
Short=OsC3H3 gi|215701065|dbj|BAG92489.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218187901|gb|EEC70328.1| hypothetical protein
OsI_01197 [Oryza sativa Indica Group]
gi|222618113|gb|EEE54245.1| hypothetical protein
OsJ_01120 [Oryza sativa Japonica Group]
Length = 167
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +1
Query: 25 GRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
G Q + +S GN+LG TSWGNLPPSL PPPE GYPP PF+DWG
Sbjct: 123 GYQAADGSSFSGNILGGH--TSWGNLPPSLRPPPEGGYPPFPFVDWG 167
>ref|XP_006344809.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform X1 [Solanum tuberosum]
gi|565355893|ref|XP_006344810.1| PREDICTED: zinc finger
CCCH domain-containing protein 3-like isoform X2
[Solanum tuberosum]
Length = 150
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = +1
Query: 16 FLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
F Q SAS PG+V + G S GNLPPSL PPPE GYPPLPF++WG
Sbjct: 101 FHSSSQPFGSASFPGDVFREKAGASLGNLPPSLRPPPEGGYPPLPFVEWG 150
>ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
gi|241927354|gb|EES00499.1| hypothetical protein
SORBIDRAFT_03g009590 [Sorghum bicolor]
Length = 164
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +1
Query: 25 GRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
G Q + S GN+LG T+WGNLPPSL PPPE GYPPLPFIDWG
Sbjct: 120 GYQGPDRNSFSGNILGGH--TAWGNLPPSLQPPPEGGYPPLPFIDWG 164
>ref|XP_004230342.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Solanum lycopersicum]
Length = 150
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/50 (58%), Positives = 33/50 (66%)
Frame = +1
Query: 16 FLPGRQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
F Q SAS PG+V + G S NLPPSL PPPE GYPPLPF++WG
Sbjct: 101 FHSSSQPFGSASFPGDVFREKAGASLSNLPPSLRPPPEGGYPPLPFVEWG 150
>ref|XP_003591237.1| Zinc finger matrin type 5 [Medicago truncatula]
gi|355480285|gb|AES61488.1| Zinc finger matrin type 5
[Medicago truncatula] gi|388501098|gb|AFK38615.1|
unknown [Medicago truncatula]
Length = 122
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +1
Query: 55 PGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
PGN++GD++G S+GNLPPSL PPPE GY LPF+DWG
Sbjct: 86 PGNIVGDTMGVSFGNLPPSLQPPPEVGYSNLPFLDWG 122
>gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]
Length = 166
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +1
Query: 31 QVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
Q ++ S G +LG SWGNLPPSL PPPE GYPPLPFIDWG
Sbjct: 124 QGVDINSSSGKILGGH--ASWGNLPPSLQPPPEGGYPPLPFIDWG 166
>ref|XP_004495629.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform X1 [Cicer arietinum]
gi|502116894|ref|XP_004495630.1| PREDICTED: zinc finger
CCCH domain-containing protein 3-like isoform X2 [Cicer
arietinum]
Length = 127
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/54 (59%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Frame = +1
Query: 16 FLPGRQVLESASLPGNVLGDSIGTSWG----NLPPSLWPPPESGYPPLPFIDWG 165
F P Q L+ PGNV GDS+ T G NLPPSL PPPE GYP LPF+DWG
Sbjct: 77 FHPNTQQLQQ---PGNVAGDSMRTRMGVSLDNLPPSLQPPPEGGYPELPFVDWG 127
>gb|ESW17024.1| hypothetical protein PHAVU_007G203900g [Phaseolus vulgaris]
Length = 121
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +1
Query: 55 PGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
PGNV +G S GNLPPSL PPPE+GYP LPF+DWG
Sbjct: 89 PGNV----VGLSLGNLPPSLQPPPEAGYPHLPFVDWG 121
>gb|ESW17023.1| hypothetical protein PHAVU_007G203900g [Phaseolus vulgaris]
Length = 125
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +1
Query: 40 ESASLPGNVL--GDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
+ A +P V+ G+ +G S GNLPPSL PPPE+GYP LPF+DWG
Sbjct: 82 QHAPIPSPVVHAGNVVGLSLGNLPPSLQPPPEAGYPHLPFVDWG 125
>ref|NP_001190404.1| nucleic acid binding / zinc ion binding protein [Arabidopsis
thaliana] gi|332006212|gb|AED93595.1| nucleic acid
binding / zinc ion binding protein [Arabidopsis
thaliana]
Length = 166
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 28 RQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
+Q ++ ++L + + GT W +LPPSL PPPE GYP LPFIDWG
Sbjct: 121 QQHIQGSTLNRDFVSGRPGTGWFDLPPSLKPPPEQGYPQLPFIDWG 166
>ref|NP_001154741.1| nucleic acid binding / zinc ion binding protein [Arabidopsis
thaliana] gi|332006211|gb|AED93594.1| nucleic acid
binding / zinc ion binding protein [Arabidopsis
thaliana]
Length = 147
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 28 RQVLESASLPGNVLGDSIGTSWGNLPPSLWPPPESGYPPLPFIDWG 165
+Q ++ ++L + + GT W +LPPSL PPPE GYP LPFIDWG
Sbjct: 102 QQHIQGSTLNRDFVSGRPGTGWFDLPPSLKPPPEQGYPQLPFIDWG 147