BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00015068
         (609 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...    81   2e-23
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]    82   4e-23
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    80   1e-22
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...    80   1e-22
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    79   6e-22
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]    84   2e-19
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    78   4e-19
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]    78   4e-19
gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ...    81   8e-19
ref|XP_004235091.1| PREDICTED: uncharacterized protein LOC101246...    92   1e-18
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259...    79   1e-18
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]    78   2e-18
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]             86   4e-18
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    69   9e-18
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...    73   2e-17
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]    92   3e-17
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]    87   4e-17
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]    87   4e-17
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi...    69   4e-17
emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]    69   4e-17

>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score = 81.3 bits (199), Expect(3) = 2e-23
 Identities = 39/81 (48%), Positives = 52/81 (64%)
 Frame = +3

Query: 336 QNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFFL 515
           QNGRVE KH+HIL  +RAL  Q+  P QFWG+ + +   LINRTPS + Q K+P +  + 
Sbjct: 445 QNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYK 504

Query: 516 KPLDISYLHVFGCLCYTYILN 578
              + S+L VFG LCY +  N
Sbjct: 505 TAPNYSHLRVFGSLCYAHNQN 525



 Score = 47.4 bits (111), Expect(3) = 2e-23
 Identities = 25/70 (35%), Positives = 32/70 (45%)
 Frame = +2

Query: 83  TKIYVSVSYFLNSVDDHSRTTWIYLLIDKSSDRSYFKYFFYSYPNSIS*NHKNCLYRNST 262
           T  Y    YFL  VDD+SR  W+YL+ DKS  + + K F            K     N T
Sbjct: 360 TPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEIKTVRSDNGT 419

Query: 263 *FLSLMPFFL 292
            FL +  +FL
Sbjct: 420 EFLCMREYFL 429



 Score = 26.6 bits (57), Expect(3) = 2e-23
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 10  SFPLSSTHSSALFDTIHYDVW 72
           +FPLS   S   F  IH DVW
Sbjct: 335 TFPLSDNRSMDSFQLIHCDVW 355


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score = 82.4 bits (202), Expect(3) = 4e-23
 Identities = 52/133 (39%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
 Frame = +3

Query: 186  ILSIFFTLIQTQFHKTIKIVCTVIVHNS*A*CPSFSLNVVLSNKCGLH*-------QQNG 344
            +L  F  L+  QF   +KIV +    N     P F      S++  LH        QQNG
Sbjct: 632  LLVHFVNLVANQFGSQVKIVRS---DNG----PEFKHTQFYSSRGILHQTSCINTPQQNG 684

Query: 345  RVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFFLKPL 524
             VE KH+H+L  +RAL  Q+  P  FWG  + T   LINRTP+ + Q KTP +  F K  
Sbjct: 685  VVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFEKLFHKSP 744

Query: 525  DISYLHVFGCLCY 563
            + S+L VFGC C+
Sbjct: 745  NYSHLRVFGCRCF 757



 Score = 42.4 bits (98), Expect(3) = 4e-23
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = +2

Query: 107 YFLNSVDDHSRTTWIYLLIDKSSDRSYFKYF 199
           YFL  VDDHSR+TW+YL+  KS  RS   +F
Sbjct: 606 YFLTIVDDHSRSTWVYLMHHKSEARSLLVHF 636



 Score = 29.6 bits (65), Expect(3) = 4e-23
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 13  FPLSSTHSSALFDTIHYDVW 72
           FPLS + S + FD IH D+W
Sbjct: 574 FPLSVSSSDSCFDLIHVDIW 593


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 80.5 bits (197), Expect(3) = 1e-22
 Identities = 39/81 (48%), Positives = 51/81 (62%)
 Frame = +3

Query: 336 QNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFFL 515
           QNGRVE KH+HIL  +RAL  Q+  P QFWG+ + +   LINRTPS + Q K+P +  + 
Sbjct: 669 QNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYK 728

Query: 516 KPLDISYLHVFGCLCYTYILN 578
                S+L VFG LCY +  N
Sbjct: 729 TAPKYSHLRVFGSLCYAHNQN 749



 Score = 45.4 bits (106), Expect(3) = 1e-22
 Identities = 24/67 (35%), Positives = 31/67 (46%)
 Frame = +2

Query: 92  YVSVSYFLNSVDDHSRTTWIYLLIDKSSDRSYFKYFFYSYPNSIS*NHKNCLYRNST*FL 271
           Y    YFL  VDD+SR  W+YL+ DKS  + + K F            K     N T FL
Sbjct: 587 YSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEIKIVRSDNGTEFL 646

Query: 272 SLMPFFL 292
            +  +FL
Sbjct: 647 CMREYFL 653



 Score = 26.6 bits (57), Expect(3) = 1e-22
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 10  SFPLSSTHSSALFDTIHYDVW 72
           +FPLS   S   F  IH DVW
Sbjct: 559 TFPLSDNRSMDSFQLIHCDVW 579


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score = 80.5 bits (197), Expect(3) = 1e-22
 Identities = 39/81 (48%), Positives = 51/81 (62%)
 Frame = +3

Query: 336 QNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFFL 515
           QNGRVE KH+HIL  +RAL  Q+  P QFWG+ + +   LINRTPS + Q K+P +  + 
Sbjct: 445 QNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYK 504

Query: 516 KPLDISYLHVFGCLCYTYILN 578
                S+L VFG LCY +  N
Sbjct: 505 TAPKYSHLRVFGSLCYAHNQN 525



 Score = 47.4 bits (111), Expect(3) = 1e-22
 Identities = 25/70 (35%), Positives = 32/70 (45%)
 Frame = +2

Query: 83  TKIYVSVSYFLNSVDDHSRTTWIYLLIDKSSDRSYFKYFFYSYPNSIS*NHKNCLYRNST 262
           T  Y    YFL  VDD+SR  W+YL+ DKS  + + K F            K     N T
Sbjct: 360 TPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQFDTEIKTVRSDNGT 419

Query: 263 *FLSLMPFFL 292
            FL +  +FL
Sbjct: 420 EFLCMREYFL 429



 Score = 24.6 bits (52), Expect(3) = 1e-22
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 10  SFPLSSTHSSALFDTIHYDVW 72
           +FPL    S   F  IH DVW
Sbjct: 335 TFPLRDNRSMDSFQLIHCDVW 355


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 79.0 bits (193), Expect(3) = 6e-22
 Identities = 41/93 (44%), Positives = 52/93 (55%)
 Frame = +3

Query: 300 VVLSNKCGLH*QQNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSI 479
           V+    C    ++N RVE KH+H+L  +RAL  QA  P QFWG+ V T   LINRTPSS+
Sbjct: 533 VIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAYLINRTPSSV 592

Query: 480 PQ*KTP*KSFFLKPLDISYLHVFGCLCYTYILN 578
               TP +    K     +L VFG LCY +  N
Sbjct: 593 LNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRN 625



 Score = 47.0 bits (110), Expect(3) = 6e-22
 Identities = 26/69 (37%), Positives = 32/69 (46%)
 Frame = +2

Query: 83  TKIYVSVSYFLNSVDDHSRTTWIYLLIDKSSDRSYFKYFFYSYPNSIS*NHKNCLYRNST 262
           T  +    YFL  +DD+SR  W+YLL DKS    + K FF       +   K     N T
Sbjct: 460 TPSHTGARYFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKTVRSDNGT 519

Query: 263 *FLSLMPFF 289
            FL L  FF
Sbjct: 520 EFLCLTKFF 528



 Score = 24.3 bits (51), Expect(3) = 6e-22
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 10  SFPLSSTHSSALFDTIHYDVW 72
           SFPLS   +  +F+ I+ D+W
Sbjct: 435 SFPLSINKTLRIFELIYCDLW 455


>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
          Length = 1472

 Score = 84.0 bits (206), Expect(2) = 2e-19
 Identities = 41/77 (53%), Positives = 50/77 (64%)
 Frame = +3

Query: 333 QQNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFF 512
           QQNG VE KH+HIL+ +RAL   A  P+QFWG+   T V +IN  PS +   KTP +  +
Sbjct: 658 QQNGVVERKHRHILQVTRALKFHAQVPTQFWGECALTAVHIINWLPSPVLSFKTPFELLY 717

Query: 513 LKPLDISYLHVFGCLCY 563
            KP   SYLHVFGCL Y
Sbjct: 718 SKPPSYSYLHVFGCLAY 734



 Score = 37.7 bits (86), Expect(2) = 2e-19
 Identities = 27/81 (33%), Positives = 36/81 (44%)
 Frame = +2

Query: 107 YFLNSVDDHSRTTWIYLLIDKSSDRSYFKYFFYSYPNSIS*NHKNCLYRNST*FLSLMPF 286
           YFL  VDD++R TWI+L+  K   +S  K FF           K     N   F SL  F
Sbjct: 582 YFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFSYVFTQFEFCIKTFRNDNGREFTSLHSF 641

Query: 287 FLSECSIIKQVWFTLTTKWEG 349
           F  +  +I Q  +  T +  G
Sbjct: 642 F-QDNGVIFQHSYVYTPQQNG 661


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 77.8 bits (190), Expect(3) = 4e-19
 Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
 Frame = +3

Query: 186  ILSIFFTLIQTQFHKTIKIVCT---VIVHNS*A*CPSFSLNVVLSNKCGLH*QQNGRVEH 356
            IL  F + ++TQF++ IK + T     + +      +  +N    + C    QQNG VE 
Sbjct: 640  ILQSFISWVETQFNRCIKTLRTDNGTEISSMKQYLDTKGINY--HHSCAYTPQQNGVVER 697

Query: 357  KHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFFLKPLDISY 536
            KH+H+L   RAL  QA  P +FWG+ ++T   LINR P+ +   K+P +    K     +
Sbjct: 698  KHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHH 757

Query: 537  LHVFGCLCY 563
            L  FGCLCY
Sbjct: 758  LRTFGCLCY 766



 Score = 35.0 bits (79), Expect(3) = 4e-19
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 107 YFLNSVDDHSRTTWIYLLIDKSSDRSYFKYF 199
           YFL  VDDH+R TWI+L+  KS  +   + F
Sbjct: 614 YFLTIVDDHTRYTWIHLMSFKSETQGILQSF 644



 Score = 27.7 bits (60), Expect(3) = 4e-19
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 10  SFPLSSTHSSALFDTIHYDVW 72
           SFP S   S A FD IH D+W
Sbjct: 581 SFPSSFISSHAPFDLIHCDIW 601


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score = 77.8 bits (190), Expect(3) = 4e-19
 Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
 Frame = +3

Query: 186 ILSIFFTLIQTQFHKTIKIVCT---VIVHNS*A*CPSFSLNVVLSNKCGLH*QQNGRVEH 356
           IL  F + ++TQF++ IK + T     + +      +  +N    + C    QQNG VE 
Sbjct: 232 ILQSFISWVETQFNRCIKTLRTDNGTEISSMKQYLDTKGINY--HHSCAYTPQQNGVVER 289

Query: 357 KHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFFLKPLDISY 536
           KH+H+L   RAL  QA  P +FWG+ ++T   LINR P+ +   K+P +    K     +
Sbjct: 290 KHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHH 349

Query: 537 LHVFGCLCY 563
           L  FGCLCY
Sbjct: 350 LRTFGCLCY 358



 Score = 35.0 bits (79), Expect(3) = 4e-19
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 107 YFLNSVDDHSRTTWIYLLIDKSSDRSYFKYF 199
           YFL  VDDH+R TWI+L+  KS  +   + F
Sbjct: 206 YFLTIVDDHTRYTWIHLMSFKSETQGILQSF 236



 Score = 27.7 bits (60), Expect(3) = 4e-19
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 10  SFPLSSTHSSALFDTIHYDVW 72
           SFP S   S A FD IH D+W
Sbjct: 173 SFPSSFISSHAPFDLIHCDIW 193


>gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
           cacao]
          Length = 1141

 Score = 81.3 bits (199), Expect(2) = 8e-19
 Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
 Frame = +3

Query: 198 FFTLIQTQFHKTIKIVCT---VIVHNS*A*CPSFSLNVVLSNKCGLH*QQNGRVEHKHKH 368
           F+  ++TQF+  +KIV +   +   +S          +     C    QQNGRVE  H+H
Sbjct: 404 FYQWVRTQFNTQVKIVRSDNRMEFKHSDLLTYYNENGIERQTSCTNTPQQNGRVERNHRH 463

Query: 369 ILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFFLKPLDISYLHVF 548
           +L+ +R L  QA  P +FWG+ V T   LINR P S+ + KTP +  F +     +L  F
Sbjct: 464 LLEVARVLRFQAYLPIKFWGECVLTAAYLINRMPLSVLKNKTPYEILFGRSPTYQHLRTF 523

Query: 549 GCLCYTYILN 578
           GCLCY  I N
Sbjct: 524 GCLCYGLITN 533



 Score = 38.5 bits (88), Expect(2) = 8e-19
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 107 YFLNSVDDHSRTTWIYLLIDKSSDRSYFKYFF 202
           YFL  V+D+SR  W+YL+  KS  R Y  +F+
Sbjct: 374 YFLTIVNDYSRAIWVYLMKHKSKTRDYLLHFY 405


>ref|XP_004235091.1| PREDICTED: uncharacterized protein LOC101246227 [Solanum
            lycopersicum]
          Length = 814

 Score = 91.7 bits (226), Expect(2) = 1e-18
 Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
 Frame = +3

Query: 168  KAAIVLILSIFFTLIQTQFHKTIKIVC----TVIVHNS*A*CPSF--SLNVVLSNKCGLH 329
            K+ ++ IL  FF L++TQF K IK V     T   +N    C +   SL +V  + C   
Sbjct: 657  KSDVLAILKSFFVLVKTQFDKQIKRVRLDNGTEFFNNE---CKTLFTSLGIVHESSCPHT 713

Query: 330  *QQNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSF 509
             QQNG VE KH+HIL+ +RAL  Q   P +FWG+ V   V LINR P+S+ Q ++P + F
Sbjct: 714  PQQNGVVERKHRHILEVARALRFQGSIPIKFWGECVLAAVYLINRMPTSVLQGRSPYEVF 773

Query: 510  FLKPLDISYLHVFGCLCY 563
            +     + +L   GCL Y
Sbjct: 774  YKTKPQLDHLRTIGCLSY 791



 Score = 27.3 bits (59), Expect(2) = 1e-18
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 10  SFPLSSTHSSALFDTIHYDVW 72
           +FP+SS+ +  +F  IH DVW
Sbjct: 604 TFPMSSSRTDDVFYLIHLDVW 624


>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
            lycopersicum]
          Length = 986

 Score = 79.0 bits (193), Expect(3) = 1e-18
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
 Frame = +3

Query: 189  LSIFFTLIQTQFH---KTIKIVCTVIVHNS*A*CPSFSLNVVLSNKCGLH*QQNGRVEHK 359
            +  F +LI+ QFH   KTI+    +   N+ A        ++    C    QQNG VE K
Sbjct: 704  IKAFVSLIENQFHTRLKTIRSDNGLEFSNNEATSFFQEKGIIHQKSCPYTPQQNGVVERK 763

Query: 360  HKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFFLKPLDISYL 539
            HK++L+ +RAL  Q+  P ++WG+ V T   LINR P+ + Q K+P +  + K    S+L
Sbjct: 764  HKYLLETARALLFQSKLPMRYWGECVLTATYLINRLPTKLLQGKSPYELLYQKKPFYSHL 823

Query: 540  HVFGCLCY 563
              FGCLC+
Sbjct: 824  KNFGCLCF 831



 Score = 31.2 bits (69), Expect(3) = 1e-18
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 107 YFLNSVDDHSRTTWIYLLIDKSSDRSYFKYF 199
           YFL  VDD+SR TW  L+  KS+     K F
Sbjct: 677 YFLTMVDDYSRATWTQLIRCKSNALHTIKAF 707



 Score = 28.5 bits (62), Expect(3) = 1e-18
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +1

Query: 13  FPLSSTHSSALFDTIHYDVW 72
           FP S+T +S++F+ +H D+W
Sbjct: 645 FPESTTRTSSIFELLHVDLW 664


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score = 77.8 bits (190), Expect(3) = 2e-18
 Identities = 38/83 (45%), Positives = 50/83 (60%)
 Frame = +3

Query: 336 QNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFFL 515
           QNGRVE KH+H+L  +R+L  Q+  P  +W   V T   LINRTPSSI   +TP +  F 
Sbjct: 660 QNGRVERKHQHLLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSSILNNQTPYQLLFQ 719

Query: 516 KPLDISYLHVFGCLCYTYILNFN 584
           KP + +Y   FGCLC+   +  N
Sbjct: 720 KPPNYNYFKXFGCLCFASTITNN 742



 Score = 33.5 bits (75), Expect(3) = 2e-18
 Identities = 25/87 (28%), Positives = 35/87 (40%)
 Frame = +2

Query: 92  YVSVSYFLNSVDDHSRTTWIYLLIDKSSDRSYFKYFFYSYPNSIS*NHKNCLYRNST*FL 271
           Y    +FL  VDD +R TW++L+  K+   +    F        + N +     N   F 
Sbjct: 579 YSXYXFFLTXVDDFTRFTWLFLMKTKTETXAILTNFLAYVHTHFNTNIQTLXSDNGQEF- 637

Query: 272 SLMPFFLSECSIIKQVWFTLTTKWEGR 352
             MP F  E  II Q+    T    GR
Sbjct: 638 -NMPTFYQEHGIIHQLSCVETPXQNGR 663



 Score = 26.6 bits (57), Expect(3) = 2e-18
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 13  FPLSSTHSSALFDTIHYDVW 72
           FP+S++ S+  F  +H ++W
Sbjct: 552 FPISNSQSNKAFQLVHXBIW 571


>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score = 85.5 bits (210), Expect(2) = 4e-18
 Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
 Frame = +3

Query: 159  LLIKAAIVLILSIFFTLIQTQFHKTIKIVC----TVIVHNS*A*CPSF--SLNVVLSNKC 320
            L +K+  ++ +  FF++I TQF+  +K+V     T  +++    C      L ++  + C
Sbjct: 596  LQLKSETIVAIKNFFSMINTQFNSHVKVVRSDNGTEFLNSQ---CKDLFNHLGILHQSSC 652

Query: 321  GLH*QQNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP* 500
                QQNG VE KH+HIL  +RA+  QA  P +FWG  ++  V L+NR PSS    K+  
Sbjct: 653  PHTPQQNGVVERKHRHILNIARAIRFQAHLPIRFWGYCIRAAVYLMNRLPSSANSNKSAY 712

Query: 501  KSFFLKPLDISYLHVFGCLCY 563
            +  + K   + +L V GCLCY
Sbjct: 713  ELLYCKQPSLFHLKVIGCLCY 733



 Score = 32.0 bits (71), Expect(2) = 4e-18
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +1

Query: 10  SFPLSSTHSSALFDTIHYDVW 72
           +FP+S+T +S +FD +H D+W
Sbjct: 546 TFPVSTTRTSMMFDVVHMDLW 566


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 68.9 bits (167), Expect(3) = 9e-18
 Identities = 38/89 (42%), Positives = 47/89 (52%)
 Frame = +3

Query: 300 VVLSNKCGLH*QQNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSI 479
           +V  + C    +QN  VE KH+HIL  +RAL  Q+  P   WG  V T V LINRTPS +
Sbjct: 699 IVSFHSCPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQL 758

Query: 480 PQ*KTP*KSFFLKPLDISYLHVFGCLCYT 566
              KTP +           L  FGCLCY+
Sbjct: 759 LMNKTPYEILTGTAPVYEQLRTFGCLCYS 787



 Score = 40.0 bits (92), Expect(3) = 9e-18
 Identities = 19/37 (51%), Positives = 21/37 (56%)
 Frame = +2

Query: 107 YFLNSVDDHSRTTWIYLLIDKSSDRSYFKYFFYSYPN 217
           YFL  VDDHSR TW+YLL  KS   + F  F     N
Sbjct: 635 YFLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVEN 671



 Score = 26.9 bits (58), Expect(3) = 9e-18
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 10  SFPLSSTHSSALFDTIHYDVW 72
           SFP S+     +FD +H DVW
Sbjct: 602 SFPTSNKVCKEIFDLLHIDVW 622


>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score = 72.8 bits (177), Expect(3) = 2e-17
 Identities = 50/143 (34%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
 Frame = +3

Query: 159 LLIKAAIVLILSIFFTLIQTQFHKTIKIVCTVIVHN-S*A*CPS---FSLNVVLSNKCGL 326
           L  K+     L    +LI+ QF   +KI+ +   +       PS    SL ++    C  
Sbjct: 108 LTTKSNAFATLKSLLSLIERQFSSKVKIIRSDNAYELGSGVIPSEFLASLGIIHQTTCVG 167

Query: 327 H*QQNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KS 506
             QQNG VE KH+H+L+  RAL  Q+  P +FWG  + T   LINR PS +   K P + 
Sbjct: 168 TPQQNGVVERKHRHLLETCRALLYQSHLPKKFWGDCLLTATYLINRFPSKVLNGKCPYQV 227

Query: 507 FFLKPLDISYLHVFGCLCYTYIL 575
            F    D S+L  FG LC+   L
Sbjct: 228 LFGSLPDYSHLKSFGSLCFVSTL 250



 Score = 36.6 bits (83), Expect(3) = 2e-17
 Identities = 19/40 (47%), Positives = 22/40 (55%)
 Frame = +2

Query: 56  YIMTFGFV*TKIYVSVSYFLNSVDDHSRTTWIYLLIDKSS 175
           +I T+G      Y    YFL  VDD SR TW YLL  KS+
Sbjct: 74  HIDTWGPYNVPTYKGERYFLTIVDDFSRATWTYLLTTKSN 113



 Score = 25.4 bits (54), Expect(3) = 2e-17
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 1   SEASFPLSSTHSSALFDTIHYDVW 72
           S+  FP S+  S   F+ IH D W
Sbjct: 55  SKPPFPSSTIKSKQCFELIHIDTW 78


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score = 91.7 bits (226), Expect(2) = 3e-17
 Identities = 55/127 (43%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
 Frame = +3

Query: 186  ILSIFFTLIQTQFHKTIKIVCTVIVHNS*A*CPSFSLNVVL-SNKCGLH*QQNGRVEHKH 362
            ++  FF+ + TQF   IKI  +       +    F  N VL  + C    QQNG VE KH
Sbjct: 649  LIKHFFSYVSTQFASHIKIFRSDNGGEFLSLQSFFKDNGVLFQHSCVYTPQQNGVVERKH 708

Query: 363  KHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFFLKPLDISYLH 542
            +HIL+ +RAL  QA  P+QFWG+   T V +INR PS +   KTP +  +LKP   S+L 
Sbjct: 709  RHILQVARALKFQAQLPTQFWGECALTAVHIINRLPSPVLSFKTPFERLYLKPPTYSHLR 768

Query: 543  VFGCLCY 563
            VFGCL Y
Sbjct: 769  VFGCLAY 775



 Score = 22.7 bits (47), Expect(2) = 3e-17
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 13  FPLSSTHSSALFDTIHYDVWIR 78
           F  S   S   FD IH D+W R
Sbjct: 591 FGTSEISSEKPFDLIHCDIWGR 612


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score = 87.0 bits (214), Expect(2) = 4e-17
 Identities = 59/166 (35%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
 Frame = +3

Query: 75  SYKQKSMCRFPIFLIR*MITLVLLGFICLLIKAAIVLILSIFFTLIQTQFHKTIKIVCTV 254
           SYK  S C    FL         +    L+ K  +  +   F  ++  QF +T+K+V + 
Sbjct: 332 SYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVVQSD 391

Query: 255 IVHNS*A*CPSFSLNVVL-SNKCGLH*QQNGRVEHKHKHILKFSRALSLQACFPSQFWGK 431
                      FS   +L    C    QQNGRVE KHKHIL   RAL  QA  P  FWG+
Sbjct: 392 NGTEFKCLLDYFSATGILFQTSCVGTPQQNGRVERKHKHILNVGRALRFQANLPIYFWGE 451

Query: 432 YVKTTVLLINRTPSSIPQ*KTP*KSFFLKPLDISYLHVFGCLCYTY 569
            V     LINRTPS +   KTP +  F  P   + +H FGCL + +
Sbjct: 452 SVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAH 497



 Score = 26.9 bits (58), Expect(2) = 4e-17
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 13  FPLSSTHSSALFDTIHYDVW 72
           FPLS   ++ +F+ IH D+W
Sbjct: 311 FPLSDNKATRIFEKIHCDLW 330


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score = 87.0 bits (214), Expect(2) = 4e-17
 Identities = 59/166 (35%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
 Frame = +3

Query: 75  SYKQKSMCRFPIFLIR*MITLVLLGFICLLIKAAIVLILSIFFTLIQTQFHKTIKIVCTV 254
           SYK  S C    FL         +    L+ K  +  +   F  ++  QF +T+K+V + 
Sbjct: 246 SYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVVQSD 305

Query: 255 IVHNS*A*CPSFSLNVVL-SNKCGLH*QQNGRVEHKHKHILKFSRALSLQACFPSQFWGK 431
                      FS   +L    C    QQNGRVE KHKHIL   RAL  QA  P  FWG+
Sbjct: 306 NGTEFKCLLDYFSATGILFQTSCVGTPQQNGRVERKHKHILNVGRALRFQANLPIYFWGE 365

Query: 432 YVKTTVLLINRTPSSIPQ*KTP*KSFFLKPLDISYLHVFGCLCYTY 569
            V     LINRTPS +   KTP +  F  P   + +H FGCL + +
Sbjct: 366 SVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAH 411



 Score = 26.9 bits (58), Expect(2) = 4e-17
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 13  FPLSSTHSSALFDTIHYDVW 72
           FPLS   ++ +F+ IH D+W
Sbjct: 225 FPLSDNKATRIFEKIHCDLW 244


>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score = 68.9 bits (167), Expect(3) = 4e-17
 Identities = 36/78 (46%), Positives = 44/78 (56%)
 Frame = +3

Query: 333 QQNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTPSSIPQ*KTP*KSFF 512
           +QN  VE KH+HIL  +RAL  Q+  P   WG+ V T V LINRTPS +   KTP +   
Sbjct: 569 EQNSVVERKHQHILNVARALMFQSQVPLFLWGECVLTAVFLINRTPSQLLSNKTPYEILS 628

Query: 513 LKPLDISYLHVFGCLCYT 566
                   L  FGCLCY+
Sbjct: 629 GTAPQYGQLRTFGCLCYS 646



 Score = 40.8 bits (94), Expect(3) = 4e-17
 Identities = 20/37 (54%), Positives = 21/37 (56%)
 Frame = +2

Query: 107 YFLNSVDDHSRTTWIYLLIDKSSDRSYFKYFFYSYPN 217
           YFL  VDDHSR TWIYLL  KS   + F  F     N
Sbjct: 494 YFLTIVDDHSRATWIYLLKTKSEVLTIFHDFIQQVEN 530



 Score = 23.9 bits (50), Expect(3) = 4e-17
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 10  SFPLSSTHSSALFDTIHYDVW 72
           SFP  +   + +F+ +H D+W
Sbjct: 461 SFPSQNNVCNEIFEMLHIDIW 481


>emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
          Length = 845

 Score = 69.3 bits (168), Expect(3) = 4e-17
 Identities = 33/94 (35%), Positives = 51/94 (54%)
 Frame = +3

Query: 291 SLNVVLSNKCGLH*QQNGRVEHKHKHILKFSRALSLQACFPSQFWGKYVKTTVLLINRTP 470
           S  ++    C    QQNG  E K++H+L   R L L++  PS FW + +KT   LINR P
Sbjct: 614 SKGIIHQRSCPSTPQQNGVAERKNRHLLDVVRTLLLESSVPSMFWVEALKTATHLINRLP 673

Query: 471 SSIPQ*KTP*KSFFLKPLDISYLHVFGCLCYTYI 572
           S +   ++P    F K     +L +FGC+C+ ++
Sbjct: 674 SQVLHMESPYFRLFAKQPSYDHLRIFGCVCFVHL 707



 Score = 35.8 bits (81), Expect(3) = 4e-17
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +2

Query: 107 YFLNSVDDHSRTTWIYLLIDKSSDRSYFKYFFYSYPNSIS*NHKNCLYRNST*FLSL-MP 283
           Y++  +DDHSR TW+Y L  KS     F  F     N  S + K     +   +LS    
Sbjct: 550 YYVTFIDDHSRFTWVYFLRSKSEVFXTFTEFLAYVDNQFSTSIKTLRTDSGGEYLSTEFQ 609

Query: 284 FFLSECSIIKQ 316
            FL+   II Q
Sbjct: 610 AFLASKGIIHQ 620



 Score = 28.5 bits (62), Expect(3) = 4e-17
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 13  FPLSSTHSSALFDTIHYDVW 72
           FPL ++ +S  FD IH DVW
Sbjct: 518 FPLHASRASHCFDLIHSDVW 537