BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00015029
         (3549 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1685   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...  1679   0.0  
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...  1677   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1636   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1606   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1598   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1595   0.0  
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...  1589   0.0  
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca...  1588   0.0  
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...  1585   0.0  
gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RP...  1585   0.0  
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...  1579   0.0  
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...  1579   0.0  
gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus...  1577   0.0  
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...  1538   0.0  
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...  1533   0.0  
gb|EOY19646.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...  1524   0.0  
ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymer...  1518   0.0  
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps...  1508   0.0  
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...  1504   0.0  

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1685 bits (4363), Expect = 0.0
 Identities = 830/1038 (79%), Positives = 913/1038 (87%), Gaps = 2/1038 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RGAD +KLVS KEE+SEMGGYFILNGLERVVRLLILPKRNYP SMVRNSFR+RREGYTDK
Sbjct: 100  RGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDK 159

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRCVRED SAVT+KLYYL NGSARLGFWIQGREYLLPVG+VLKAL DT+DHEIY SL
Sbjct: 160  AVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESL 219

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            TCCY EKY+G KG+VGTQLVGER KIILDEV  LSLFTR QCL+HIG+HFQ VM G+E E
Sbjct: 220  TCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENE 279

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
              + VADAVL EYIFVHL NN+DKFNLL++M+QKLFSL+DQTSVPDNPD LQNQE+LLPG
Sbjct: 280  SYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPG 339

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDNNKKFEFTNLADIKKVIDKNSPKQISSAIENML 902
            HLITIYLKEKLQEWL K +R LQDE +  K FEF++LA +KKV+DKN  +QIS A+ENML
Sbjct: 340  HLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVMDKNPSRQISLAVENML 399

Query: 903  KTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPESW 1082
            KTGRL TQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE+W
Sbjct: 400  KTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAW 459

Query: 1083 GFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXXP 1262
            GFLCPVHTPDGEPCGLLNHM STCRITS++DS+GN RDFFK+RM               P
Sbjct: 460  GFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALP 519

Query: 1263 KLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSAM--IPEDLEVGYVPLSTC 1436
            KLV AGPP+VLSV+LDGR+VGSIP   VE AV+HLRRLK+SA+  IP+DLEVGY+PLS  
Sbjct: 520  KLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSMG 579

Query: 1437 GTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVFP 1616
            G YPGLYLFT PSRF+RPV+NIS+PS + + +ELIGPFEQVYMEI CPDG DGGR+++FP
Sbjct: 580  GAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIFP 639

Query: 1617 ATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHLQ 1796
            ATHEEIHPTG LSVVA+LTPWSDHNQSPRNMYQCQMGKQTM F SQAI+ RADQKLYHLQ
Sbjct: 640  ATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHLQ 699

Query: 1797 TPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIYQ 1976
            TPQTPIVRT AY  Y++D+FP GTNAIVAVLAYSGYDMEDAMILNKSSV+RG+ HG IYQ
Sbjct: 700  TPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQ 759

Query: 1977 TETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEITS 2156
            TETIDL ++++KSDR  R FRRSN+DKS+  LIDSDGLPY+GQ I P+EPYCSIYNE+TS
Sbjct: 760  TETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVTS 819

Query: 2157 STCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQL 2336
            ST  TKLKGSEPVIVDYVA+D KNKK+ QK NIRFRR RNP+IGDKFSSRHGQKGVCSQL
Sbjct: 820  STRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQL 879

Query: 2337 WSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSPA 2516
            W DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF  S  
Sbjct: 880  WPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDSLR 939

Query: 2517 HASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRHM 2696
             A+    SESSSLVDELG ML + GFNYHG EVLYSG YGTELTCEIFIGPVYYQRLRHM
Sbjct: 940  KANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRHM 999

Query: 2697 VSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDHH 2876
            VSDKFQVRSTGTVDQ+TRQP           FGEMERDS+LAHGAAYLLHDRLHT SDHH
Sbjct: 1000 VSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHH 1059

Query: 2877 IADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYVFR 3056
            IADVCSLCGSILTT++IQ QKRA+REIGGLPP RAPKKV C +C+TSKGMETV+MPY+FR
Sbjct: 1060 IADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYIFR 1119

Query: 3057 YLATELAAMNIKMTLQLS 3110
            +LA ELAAMNIKMTLQLS
Sbjct: 1120 FLAAELAAMNIKMTLQLS 1137


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score = 1679 bits (4348), Expect = 0.0
 Identities = 830/1040 (79%), Positives = 918/1040 (88%), Gaps = 4/1040 (0%)
 Frame = +3

Query: 3    RGAD-TKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTD 179
            RGAD +KKLV+ KEE SEMGGYFIL GLERV+RL+ILPKRNYPTSM RNSFR+RREGY+D
Sbjct: 144  RGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGYSD 203

Query: 180  KAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVS 359
            KAVVIRCVRED SAV+LKLYYL+NGSARLGFWIQGREYLLPVG++LKAL DT+DHEIYV+
Sbjct: 204  KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIYVN 263

Query: 360  LTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEK 539
            LTCCY+E+ D VKGSVGTQLVGERAKIILDEV ALSLFTR QCL HIG+HFQPV++GM+ 
Sbjct: 264  LTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGMQN 323

Query: 540  EKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLP 719
            +    VADAVL +YIFVHL NNHDKFNLL++MLQKLFSL+DQTSV DNPDSLQNQE+LLP
Sbjct: 324  DSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVLLP 383

Query: 720  GHLITIYLKEKLQEWLLKVKRQLQDETDNNKK-FEFTNLADIKKVIDKNSPKQISSAIEN 896
            GHLITIYLKEKLQ+WLLK++R LQ+ETD  KK FE ++L D+KK I+KN+PKQI   IE+
Sbjct: 384  GHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLTIES 443

Query: 897  MLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 1076
            MLKTGRLATQSGLDLQQRAGMTVQAE+LNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE
Sbjct: 444  MLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 503

Query: 1077 SWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXX 1256
            SWGFLCPVHTPDGEPCGLLNHMT++CRITS+YDSKGN++DFFKMRM              
Sbjct: 504  SWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMTPS 563

Query: 1257 XPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSAM--IPEDLEVGYVPLS 1430
             PKLV AGPP++LSVLLDGRI G IP +++EKAV+HLRRLKLS+   IP DLEVGY+PLS
Sbjct: 564  SPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIPLS 623

Query: 1431 TCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDV 1610
              G YPGLYLFT PSRF+RPV+NIS P+ + N +ELIGPFEQVYMEISCPDGGDGGRK +
Sbjct: 624  MNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGRKTL 683

Query: 1611 FPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYH 1790
            FPATH EIHPT  LSVV NLTPWSDHNQSPRNMYQCQMGKQTMGF SQA++ RADQKLYH
Sbjct: 684  FPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQKLYH 743

Query: 1791 LQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHI 1970
            LQTPQTPIVRTKAYE Y +DD+PLGTNAIVAVLAYSGYDMEDAM+LNKSSV+RGM HGHI
Sbjct: 744  LQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCHGHI 803

Query: 1971 YQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEI 2150
            YQTETIDL EQS+KSDRA R FRRSNLDKSS  LIDSDGLPY+GQRI P+EPYCSIYNEI
Sbjct: 804  YQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPYCSIYNEI 863

Query: 2151 TSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCS 2330
            TS T   KLKGSEPV+VDYVAVDVKNK +LQKANIRFRR+RNPVIGDKFSSRHGQKGVCS
Sbjct: 864  TSQTTCMKLKGSEPVVVDYVAVDVKNKAHLQKANIRFRRSRNPVIGDKFSSRHGQKGVCS 923

Query: 2331 QLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSS 2510
            QLW D+DMPFSAVTGMRPDLIINPHAFPSRMTI MLLES+AAKGGA+HGKF+DATPF   
Sbjct: 924  QLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF--- 980

Query: 2511 PAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLR 2690
             ++  +  +SESSSLVD+LG ML   GFN+HG EVLYSGVYGTELTC IFIGPVYYQRLR
Sbjct: 981  -SNTMKESESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCRIFIGPVYYQRLR 1039

Query: 2691 HMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSD 2870
            HMVSDKFQVRSTG VD ITRQP           FGEMERDSLLAHGA+YLLHDRLHTSSD
Sbjct: 1040 HMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGASYLLHDRLHTSSD 1099

Query: 2871 HHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYV 3050
            HHIADVCS CGS+LT+++IQ  KRA++ I    PAR PKKV C++CR+SKGMETVAMPYV
Sbjct: 1100 HHIADVCSECGSVLTSSVIQPPKRAVQAILKQLPAREPKKVTCVACRSSKGMETVAMPYV 1159

Query: 3051 FRYLATELAAMNIKMTLQLS 3110
            F+YLA ELAAMNIKMTL+LS
Sbjct: 1160 FKYLAAELAAMNIKMTLKLS 1179


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score = 1677 bits (4343), Expect = 0.0
 Identities = 827/1040 (79%), Positives = 919/1040 (88%), Gaps = 4/1040 (0%)
 Frame = +3

Query: 3    RGAD-TKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTD 179
            RGAD ++KL++ KEE SEMGGYFIL GLERV+RL+ILPKRNYPTSM RNSFR+RREGY+D
Sbjct: 139  RGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGYSD 198

Query: 180  KAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVS 359
            KAVVIRCVRED SAV+LKLYYL+NGSARLGFWIQGREYLLPVG++LKAL DT+DHEIYV+
Sbjct: 199  KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIYVN 258

Query: 360  LTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEK 539
            LTCCY+E+ D VKGSVGTQLVGERAKIILDEV ALSLFTR QCL HIG+HFQPV++GM+ 
Sbjct: 259  LTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGMQN 318

Query: 540  EKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLP 719
            +    VADAVL +YIFVHL NNHDKFNLL++MLQKLFSL+DQTSV DNPDSLQNQE+LLP
Sbjct: 319  DSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVLLP 378

Query: 720  GHLITIYLKEKLQEWLLKVKRQLQDETDNNKK-FEFTNLADIKKVIDKNSPKQISSAIEN 896
            GHLITIYLKEKLQ+WLLK++R LQ+ETD  KK FE ++L D+KK I+KN+PKQI  AIE+
Sbjct: 379  GHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLAIES 438

Query: 897  MLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 1076
            MLKTGRLATQSGLDLQQRAGMTVQAE+LNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE
Sbjct: 439  MLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 498

Query: 1077 SWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXX 1256
            SWGFLCPVHTPDGEPCGLLNHMT++CRITS+YDSKGN++DFFKMRM              
Sbjct: 499  SWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMTPP 558

Query: 1257 XPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSAM--IPEDLEVGYVPLS 1430
             PKLV  GPP++LSVLLDGRI G IP +++EKAV+HLRRLKLS+   IP DLEVGY+PLS
Sbjct: 559  SPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIPLS 618

Query: 1431 TCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDV 1610
              G YPGLYLFT PSRF+RPV+NIS P+ + N +EL+GPFEQVYMEISCPDGGDGGRK +
Sbjct: 619  MNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQVYMEISCPDGGDGGRKTL 678

Query: 1611 FPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYH 1790
            FPATH EIHPT  LSVV NLTPWSDHNQSPRNMYQCQMGKQTMGF SQA++ RADQKLYH
Sbjct: 679  FPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQKLYH 738

Query: 1791 LQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHI 1970
            LQTPQTPIVRTKAYE Y +DD+PLGTNAIVAVLAYSGYDMEDAM+LNKSSV+RGM HGHI
Sbjct: 739  LQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCHGHI 798

Query: 1971 YQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEI 2150
            YQTETIDL EQS+KSDRA R FRRSNLDKSS  LID+DGLPY+GQRI P+EPYCSIYNEI
Sbjct: 799  YQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGLPYVGQRINPNEPYCSIYNEI 858

Query: 2151 TSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCS 2330
            TS T + KLKGSEPV+VDYVAVDVKNK +LQKANIRFRR+RNPVIGDKFSSRHGQKGVCS
Sbjct: 859  TSQTTSMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRHGQKGVCS 918

Query: 2331 QLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSS 2510
            QLW D+DMPFSAVTGMRPDLIINPHAFPSRMTI MLLES+AAKGGA+HGKF+DATPF   
Sbjct: 919  QLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF--- 975

Query: 2511 PAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLR 2690
             ++  +  +SESSSLVD+LG ML   GFN+HG EVLYSGVYGTELTC IFIGPVYYQRLR
Sbjct: 976  -SNTMKESESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCLIFIGPVYYQRLR 1034

Query: 2691 HMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSD 2870
            HMVSDKFQVRSTG VD ITRQP           FGEMERDSLLAHGAAYLLHDRLHTSSD
Sbjct: 1035 HMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLHTSSD 1094

Query: 2871 HHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYV 3050
            HHIADVCS CGS+LT+++IQ  KRA++ I    PAR PKKV C++CR+SKGMETVAMPYV
Sbjct: 1095 HHIADVCSECGSVLTSSVIQPPKRAVQVILKQLPAREPKKVTCVACRSSKGMETVAMPYV 1154

Query: 3051 FRYLATELAAMNIKMTLQLS 3110
            F+YLA ELAAMNIKMTL+LS
Sbjct: 1155 FKYLAAELAAMNIKMTLKLS 1174


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1636 bits (4237), Expect = 0.0
 Identities = 814/1038 (78%), Positives = 894/1038 (86%), Gaps = 2/1038 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RGAD +KLVS KEE+SEMGGYFILNGLERVVRLLILPKRNYP SMVRNSFR+RREGYTDK
Sbjct: 93   RGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDK 152

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRCVRED SAVT+KLYYL NGSARLGFWIQGREYLLPVG+VLKAL DT+DHEIY SL
Sbjct: 153  AVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESL 212

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            TCCY EKY+G KG+VGTQLVGER KIILDEV  LSLFTR QCL+HIG+HFQ VM G+E E
Sbjct: 213  TCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENE 272

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
              + VADAVL EYIFVHL NN+DKFNLL++M+QKLFSL+DQTSVPDNPD LQNQE+LLPG
Sbjct: 273  SYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPG 332

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDNNKKFEFTNLADIKKVIDKNSPKQISSAIENML 902
            HLITIYLKEKLQEWL K +R LQDE +  K FEF++LA +KKV+DKN  +QIS A+ENML
Sbjct: 333  HLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVMDKNPSRQISLAVENML 392

Query: 903  KTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPESW 1082
            KTGRL TQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE+W
Sbjct: 393  KTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAW 452

Query: 1083 GFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXXP 1262
            GFLCPVHTPDGEPCGLLNHM STCRITS++DS+GN RDFFK+RM               P
Sbjct: 453  GFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALP 512

Query: 1263 KLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSAM--IPEDLEVGYVPLSTC 1436
            KLV AGPP+VLSV+LDGR+VGSIP   VE AV+HLRRLK+SA+  IP+DLEVGY+PLS  
Sbjct: 513  KLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSMG 572

Query: 1437 GTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVFP 1616
            G YPGLYLFT PSRF+RPV+NIS+PS + + +ELIGPFEQVYMEI CPDG DGGR+++FP
Sbjct: 573  GAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIFP 632

Query: 1617 ATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHLQ 1796
            ATHEEIHPTG LSVVA+LTPWSDHNQSPRNMYQCQMGKQTM F SQAI+ RADQKLYHLQ
Sbjct: 633  ATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHLQ 692

Query: 1797 TPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIYQ 1976
            TPQTPIVRT AY  Y++D+FP GTNAIVAVLAYSGYDMEDAMILNKSSV+RG+ HG IYQ
Sbjct: 693  TPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQ 752

Query: 1977 TETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEITS 2156
            TETIDL ++++KSDR  R FRRSN+DKS+  LIDSDGLPY+GQ I P+EPYCSIYNE+TS
Sbjct: 753  TETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVTS 812

Query: 2157 STCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQL 2336
            ST  TKLKGSEPVIVDYVA+D KNKK+ QK NIRFRR RNP+IGDKFSSRHGQKGVCSQL
Sbjct: 813  STRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQL 872

Query: 2337 WSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSPA 2516
            W DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF  S  
Sbjct: 873  WPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDSLR 932

Query: 2517 HASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRHM 2696
             A+    SESSSLVDELG ML + GFNYHG EVLYSG YGTELTCEIFIGPVYYQRLRHM
Sbjct: 933  KANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRHM 992

Query: 2697 VSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDHH 2876
            VSDKFQVRSTGTVDQ+TRQP           FGEMERDS+LAHGAAYLLHDRLHT SDHH
Sbjct: 993  VSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHH 1052

Query: 2877 IADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYVFR 3056
            IADVCSLCGSILTT++IQ QKRA                      TSKGMETV+MPY+FR
Sbjct: 1053 IADVCSLCGSILTTSIIQPQKRA----------------------TSKGMETVSMPYIFR 1090

Query: 3057 YLATELAAMNIKMTLQLS 3110
            +LA ELAAMNIKMTLQLS
Sbjct: 1091 FLAAELAAMNIKMTLQLS 1108


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1606 bits (4159), Expect = 0.0
 Identities = 795/1044 (76%), Positives = 888/1044 (85%), Gaps = 9/1044 (0%)
 Frame = +3

Query: 6    GADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDKA 185
            G D+++LVS  EE++EMGGYFILNGLERVVRLLI+PKRNYP S VR SFR+RREGYTDKA
Sbjct: 111  GVDSQQLVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMSTVRGSFRDRREGYTDKA 170

Query: 186  VVIRCVRE------DLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHE 347
            VVIRCVRE      D S+V++KLYYL +GSARLGFWIQGREYLLP G+VLKALA+T+D E
Sbjct: 171  VVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYLLPAGIVLKALAETTDRE 230

Query: 348  IYVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMV 527
            IY  LTCCYDEKY+  KG+VG+QLVGERAKIILDEV  LSLFT+ +CL HIG+HFQPVM 
Sbjct: 231  IYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFTQSECLRHIGEHFQPVMD 290

Query: 528  GMEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQE 707
            G+EKE  + VA AVL++YIFVHL N  DKFNLL++MLQKLFSLVDQTSV DNPDSLQNQE
Sbjct: 291  GLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSVVDNPDSLQNQE 350

Query: 708  ILLPGHLITIYLKEKLQEWLLKVKRQLQDETDNNKKFEFTNLADIKKVIDKNSPKQISSA 887
            +LLPGHL+TIYLKEKL+EWL K K+ LQ+E   N  F F ++ D+KKVIDKN    IS A
Sbjct: 351  VLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIAKNNNFNFLSVLDVKKVIDKNPSTTISLA 410

Query: 888  IENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 1067
            +ENMLKTGRL TQ+GLDLQQRAG TVQAERLNFLRFLS FRAVHRGASFAGLRTTSVRKL
Sbjct: 411  VENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSVRKL 470

Query: 1068 LPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXX 1247
            LPESWGFLCPVHTPDGEPCGLLNHMT +CRITS++DS+G ++DFF +R            
Sbjct: 471  LPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDIRKSILGVLTSLGM 530

Query: 1248 XXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYV 1421
                PKLV AGPP+VLSVLLDGR+VGSIP   VEK V HLRRLK++A  +IP+DLEVGYV
Sbjct: 531  TSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRRLKVAASSVIPDDLEVGYV 590

Query: 1422 PLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGR 1601
            PLS  G +PGLYLFT PSRFIRPVKNIS+P+G+   +ELIGPFEQV+MEI CPDGG+GGR
Sbjct: 591  PLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIGPFEQVFMEIRCPDGGNGGR 650

Query: 1602 KDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQK 1781
             D FPATHEEIHPT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F  Q++  RADQK
Sbjct: 651  SDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQSLRFRADQK 710

Query: 1782 LYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFH 1961
            LYHLQTPQTPIVRT +Y  Y +D++P GTNAIVAVLAY+GYDMEDAMILNKSSVERGM H
Sbjct: 711  LYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCH 770

Query: 1962 GHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIY 2141
            G IYQTETIDL E+ S+SDRA R FRRSN+DKS   +IDSDGLPY+GQ I P+EPYCSIY
Sbjct: 771  GQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDSDGLPYVGQMIHPNEPYCSIY 830

Query: 2142 NEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKG 2321
            NEIT++T     KGS+PVIVDYVA+D KNKK+LQK NIRFR  RNP+IGDKFSSRHGQKG
Sbjct: 831  NEITNTTRTNNRKGSDPVIVDYVAIDTKNKKHLQKVNIRFRHPRNPIIGDKFSSRHGQKG 890

Query: 2322 VCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPF 2501
            VCSQLW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG+++GKF+DATPF
Sbjct: 891  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFVDATPF 950

Query: 2502 GSSPAHASEGQ-KSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYY 2678
             SS  + + G+ KSES SLVD+LG MLR+ GFNYHG EVLYSGVYGTELTCEIFIGPVYY
Sbjct: 951  TSSVKNVNGGEAKSESESLVDDLGNMLRSHGFNYHGVEVLYSGVYGTELTCEIFIGPVYY 1010

Query: 2679 QRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLH 2858
            QRLRHMVSDKFQVRSTGTVDQITRQP           FGEMERD++LAHGAAYLLHDRLH
Sbjct: 1011 QRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLH 1070

Query: 2859 TSSDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVA 3038
            T SD+HIADVCSLCGSILTT+ IQ QKR +R+IGGLPP  APKKV C SC+TSKGMETVA
Sbjct: 1071 TCSDYHIADVCSLCGSILTTSFIQTQKRVVRDIGGLPPVGAPKKVACHSCQTSKGMETVA 1130

Query: 3039 MPYVFRYLATELAAMNIKMTLQLS 3110
            MPYVFRYLA ELAAMNIKM +QLS
Sbjct: 1131 MPYVFRYLAAELAAMNIKMNVQLS 1154


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score = 1598 bits (4139), Expect = 0.0
 Identities = 789/1039 (75%), Positives = 885/1039 (85%), Gaps = 3/1039 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RGAD +KLVS KEEASEMGGYFILNGLERVVRLLILPKRNYP SMVRNSF +RREGYTDK
Sbjct: 130  RGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDK 189

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRCVR D S+++++LYYL NGSARLGFW++GREYLLPVG++LKAL DT+D EIYV+L
Sbjct: 190  AVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNL 249

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            T CY+EKY+  KG+VGTQLVGERAKIILDE+  LSLFTR QCLE+IG+HFQPVM  ++ +
Sbjct: 250  TSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKND 309

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
                VADAVL++ I VHL NN DKFNLL++MLQKLFSL+DQTSVPDNPDSLQN E+LLPG
Sbjct: 310  SYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            HLIT+YLKEKL++WL K +R L DE D  +KKF+F+++  +KKV+DKNSPKQ+S+A+ENM
Sbjct: 370  HLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM 429

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGRL TQ+GLDLQQRAG TVQAERLNFLRFLSHFRAVHRGASFAGLRTT+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNHMT T RITSF+DS+GNI+D+FK++M               
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSL 549

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLS--AMIPEDLEVGYVPLST 1433
            PK+   GPP+ L+VLLDG +VG I    VEK V+H+R LK+S  A+IP+D+EVGYVPLS 
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSM 609

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             G YPGLYL T PSRF+RPV+NIS+ S     +ELIGPFEQV+MEI CPDGGDGGRK  F
Sbjct: 610  GGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSSF 669

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEIHPT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F SQ I HRADQKLYHL
Sbjct: 670  PATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHL 729

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            QTPQTPIVRT  Y  YNID+FP GTNAIVAVLAY+GYDMEDAMILNKSSVERGMFHG IY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTETIDL EQ  +SDR+ R FR+SN++KS+   IDSDGLP++GQ I+PDEPYCSIYNE+T
Sbjct: 790  QTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVT 849

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2333
            SS    K KGSE V VDYVA DVKNKK+LQK NIRFR  RNPVIGDKFSSRHGQKGVCSQ
Sbjct: 850  SSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQ 909

Query: 2334 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 2513
            LW D+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGG++ G+F+DATPF SS 
Sbjct: 910  LWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSV 969

Query: 2514 AHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRH 2693
               S    S+S SLVD+LG +LR +GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLRH
Sbjct: 970  TKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRH 1029

Query: 2694 MVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDH 2873
            MVSDKFQVRSTGT+DQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT SD+
Sbjct: 1030 MVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDY 1089

Query: 2874 HIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYVF 3053
            HIADVCSLCGS+L TT IQ QKR +REIGGLPP RAPKKV C +C+TSKGMETVAMPYVF
Sbjct: 1090 HIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVF 1149

Query: 3054 RYLATELAAMNIKMTLQLS 3110
            RYLA ELAAMNIKMTL+LS
Sbjct: 1150 RYLAAELAAMNIKMTLKLS 1168


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1595 bits (4130), Expect = 0.0
 Identities = 780/1040 (75%), Positives = 886/1040 (85%), Gaps = 4/1040 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RG D KKLVS  EEASEMGGYF++NGLERVVRLLI PKRNYPTSMVRNSF +RREGYTDK
Sbjct: 130  RGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGYTDK 189

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRCVRED S+VT+KLYYL NGSARLGFW+QG+EYLLP+G+VLKAL DT+DHEIY SL
Sbjct: 190  AVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASL 249

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            T CY +K+   KG+VGTQLVGERAKIILDEV  L+LF   QCL+HIG+HFQPVM G+ KE
Sbjct: 250  TSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKE 309

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
            K + VADAVL++YIFVHL NN+DKFNLL++M QKLFSL+DQTSVPDNPDSLQNQ++LLPG
Sbjct: 310  KFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVLLPG 369

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIENM 899
             LIT+YLKEKL++WL KVK+ L+DE  N +K FEF +LA +KKV+DKN  KQ+SSA+ENM
Sbjct: 370  QLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAVENM 429

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGRL TQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNH+TSTCRITS ++S+G +RDF+K+R                
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIPSL 549

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLST 1433
            PKLV  G P  L+VLLDGRIVG I    VEK V+HLRRLK+ +  +IP+DLEVGYVPLS 
Sbjct: 550  PKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSI 609

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             G YPGLYLFT PSRF+RPVKN+S+     + +ELIGPFEQV+MEI CPDGGDGGRKD F
Sbjct: 610  SGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRKDEF 669

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEIHPTG LSVVANLTPWSDHNQSPRNMYQCQM KQTM F  QAI +RADQKLYHL
Sbjct: 670  PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHL 729

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            QTPQTPIVRT  Y  YNID++P GTNAIVAVLAY+GYDMEDAMILNKSSVERGMFHG IY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTETIDL +Q ++S R+ + FRRSN+D S R +ID+DGLPY+GQ I+PDEPYCSIY+E+ 
Sbjct: 790  QTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVA 849

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2333
             +T   KLKGSE VIVDYV+VDVKNK N QK NIRFRR RNP+IGDKFSSRHGQKGVCSQ
Sbjct: 850  GTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQ 909

Query: 2334 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 2513
            LW D+DMPF   TGMRPDLIINPHAFPSRMTI ML+ES+AAKGG ++G+F++ATPF SS 
Sbjct: 910  LWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSV 969

Query: 2514 AHASEG-QKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLR 2690
               + G +++   +LVDELG  L  +GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLR
Sbjct: 970  NKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLR 1029

Query: 2691 HMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSD 2870
            HMVSDK+QVRSTGTVDQ+TRQP           FGEMERDS+LAHGA+YLLHDRLHT SD
Sbjct: 1030 HMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSD 1089

Query: 2871 HHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYV 3050
            HHIADVCSLCGS+LT++ +Q  KRA+REIGGLPP +APK+V C +C+TSKGMETVAMPYV
Sbjct: 1090 HHIADVCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYV 1149

Query: 3051 FRYLATELAAMNIKMTLQLS 3110
            F+YLA ELAAMNIKMTLQLS
Sbjct: 1150 FKYLAAELAAMNIKMTLQLS 1169


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score = 1589 bits (4115), Expect = 0.0
 Identities = 781/1039 (75%), Positives = 883/1039 (84%), Gaps = 3/1039 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RGAD +KLVS +EEASEMGGYFILNGLERV+RLLILPKRN+P SMVRNSF +RREGYTDK
Sbjct: 130  RGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTDK 189

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            A+VIRCVR D S+++++LYYL NGSARLGFW++GREYLLPVG++LKAL DT+D EIYV+L
Sbjct: 190  AIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNL 249

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            T CY+EKY+  KG+VGTQLVGERAKIILDE+  LSLFTR QCLE+IG+HFQPV+  ++ +
Sbjct: 250  TSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKND 309

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
                VA+AVL++ I VHL NN DKFNLL++MLQKLFSL+DQTSVPDNPDSLQN E+LLPG
Sbjct: 310  SYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            HLIT+YLKEKL++WL K KR L DE D  +KKF+F+++  +KKV+DKNSPKQ+S+A+ENM
Sbjct: 370  HLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM 429

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGRL TQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNHMT T RITSF+DS+GN++D+FK++M               
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPSL 549

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLS--AMIPEDLEVGYVPLST 1433
            PK+   GPP+ L+VLLDG +VG I     EK V+H+R LK+S  A+IP+D+EVGYVPLS 
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLSM 609

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             G YPGLYL T PSRF+RPV+NIS+PS     +E IGPFEQV+MEI CPDGGDGGRK  F
Sbjct: 610  GGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSSF 669

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEIHPT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F SQ I HRADQKLYHL
Sbjct: 670  PATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHL 729

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            QTPQTPIVRT  Y  YNID+FP GTNAIVAVLAY+GYDMEDAMILNKSSVERGMFHG IY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTETIDL EQ  + DR+ R FR+SNL+KS+   IDSDGLP++GQ I+PDEPYCSIYNE+T
Sbjct: 790  QTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVT 849

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2333
            SS    K KGSE V VDYVAVDVKNKK+LQK NIRFR  RNPVIGDKFSSRHGQKGVCSQ
Sbjct: 850  SSIHTLKRKGSEAVYVDYVAVDVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQ 909

Query: 2334 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 2513
            LW D+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGG++ G+F+DATPF SS 
Sbjct: 910  LWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSV 969

Query: 2514 AHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRH 2693
               S    S S S+VD+LG +LR +GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLRH
Sbjct: 970  KKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRH 1029

Query: 2694 MVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDH 2873
            MVSDKFQVRSTGT+DQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT SD+
Sbjct: 1030 MVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDY 1089

Query: 2874 HIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYVF 3053
            HIADVCSLCGS+LTTT  Q QKR +REIGGLPP RAPKKV C +C+TSKGMETVAMPYVF
Sbjct: 1090 HIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVF 1149

Query: 3054 RYLATELAAMNIKMTLQLS 3110
            RYLA ELAAMNIKMTL+LS
Sbjct: 1150 RYLAAELAAMNIKMTLKLS 1168


>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
          Length = 1180

 Score = 1588 bits (4111), Expect = 0.0
 Identities = 781/1039 (75%), Positives = 883/1039 (84%), Gaps = 3/1039 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            R AD +KLV+ KEE+ EMGGYFILNGLERVVRLLILPKRNYP S+VRNSFR+RREGYTDK
Sbjct: 137  READPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREGYTDK 196

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRCVR DLS+VT+KLYYL NGSARLGFW+QGREY+LPVG++LKAL DT+D EIY  L
Sbjct: 197  AVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTNDREIYTKL 256

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            TCCY+EK    KG+VGTQLVGERAKIILDEV  L+LFT+EQCL+HIG+HFQP+M GME E
Sbjct: 257  TCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPIMEGMESE 316

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
              + VAD VL  YIFVHL +N+DKFNLL++M+QKLFSL+DQTS PDN DSLQNQE+LLPG
Sbjct: 317  SYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQNQEVLLPG 376

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            HLITIYLKEKL++WL K K+ ++D  +N +K F+F ++ D+KKV++KN P Q+S+AIEN+
Sbjct: 377  HLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQVSAAIENL 436

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGRL TQ+GLDLQQRAG TVQAERLN+ RFLS FR VHRGASFAGLRTTSVRKLLPES
Sbjct: 437  LKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSVRKLLPES 496

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNHMT TCRITS+Y+S GNIRDFFK+RM               
Sbjct: 497  WGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVGVGMTTSW 556

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLST 1433
            PK+ HAGPP+VL VLLDGR+VGS+P    EK V+HLRRLKL+A  +IP+DLEVGYVPLS 
Sbjct: 557  PKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLEVGYVPLSL 616

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             GTYPGLYLFT PSRF+RPV+NIS+PS     +ELIGPFEQV+MEI CPDGG+GGR ++F
Sbjct: 617  GGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIRCPDGGNGGRSNIF 676

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEI PT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F  QAI+ RADQKLYHL
Sbjct: 677  PATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAINARADQKLYHL 736

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            QTPQTPIVRTK Y  Y +D++P GTNAIVAVLAY+GYDMEDAMILNKSSVERGM HG IY
Sbjct: 737  QTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIY 796

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTETIDL +  SKSDR  R F+R + D+S    +DSDGLP++GQ I+P+EPYCS  N++T
Sbjct: 797  QTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPYCSTINQVT 856

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2333
            +S      KGSE VIVDYVAVD K+KK+LQKANIRFR  RNPVIGDKFSSRHGQKGVCSQ
Sbjct: 857  NSKRLYNHKGSETVIVDYVAVDTKSKKHLQKANIRFRHPRNPVIGDKFSSRHGQKGVCSQ 916

Query: 2334 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 2513
            LW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF  S 
Sbjct: 917  LWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDSV 976

Query: 2514 AHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRH 2693
              A    ++ES SLVDELG MLRA GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLRH
Sbjct: 977  KEAKGKTEAESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRH 1036

Query: 2694 MVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDH 2873
            MVSDK+QVR+TG VDQITRQP           FGEMERD++LAHGAAYLLHDRLHT SD+
Sbjct: 1037 MVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDY 1096

Query: 2874 HIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYVF 3053
            HIADVCSLCGSILTT+++Q  KR +REIGGLPPARAPKKV C +C+TSKGMETVAMPYVF
Sbjct: 1097 HIADVCSLCGSILTTSIVQPPKRVVREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVF 1156

Query: 3054 RYLATELAAMNIKMTLQLS 3110
            RYLA ELAAMNI MT+QL+
Sbjct: 1157 RYLAAELAAMNITMTIQLN 1175


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score = 1585 bits (4105), Expect = 0.0
 Identities = 785/1039 (75%), Positives = 880/1039 (84%), Gaps = 3/1039 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RGA  KKLVS KEEASE+GGYFILNGLERV+RLLI+PKRNYP S VR+SF ERREGYTDK
Sbjct: 136  RGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERREGYTDK 195

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRCVR D ++V++KLYYL NGSARLGFWI GREY+LPVG+VLKAL DT+D EIYV+L
Sbjct: 196  AVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDREIYVNL 255

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            T CY+EKY+  KG+VGTQLVGERAKIILDEV  LSLFTR QCL++IG+HFQP++ G++ E
Sbjct: 256  TSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPILQGLKNE 315

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
                VADAVL +YI VHL NN DKFNLL++MLQKLFSL+DQTSVPDNPDSLQNQE+LLPG
Sbjct: 316  SHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQEVLLPG 375

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDNN-KKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            HLIT+YLKEKL+EWL K KR L DE +     FEF  +AD+KKV++KN  K IS+AIENM
Sbjct: 376  HLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGISTAIENM 435

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGRL T +GLDL QRAG TVQAER+NFLRF+SHFRAVHRG+SFAGLRTT+VRKLLPES
Sbjct: 436  LKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVRKLLPES 495

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNHMT TCR+TSFYDS+GNI+D+FK+++               
Sbjct: 496  WGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEIGMTQSL 555

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLS--AMIPEDLEVGYVPLST 1433
            PK+   GPP+VL+VLLDG IVG IP   VEK V+H+R LK+S  A+IP D+EVGYVPLS 
Sbjct: 556  PKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVIPNDMEVGYVPLSM 615

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             G YPGLYLFT PSRF+RPV+N+S+PS  EN VELIGPFEQV+MEI CPDGGDGGRK  F
Sbjct: 616  GGAYPGLYLFTSPSRFVRPVRNLSIPSTNEN-VELIGPFEQVFMEIRCPDGGDGGRKSPF 674

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEIHPTG LSVV NLTPWSDHNQSPRNMYQCQM KQTMGF SQ I HRADQKLYHL
Sbjct: 675  PATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQTIQHRADQKLYHL 734

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            QTPQTPIVRT+AY  Y+ID++P GTNAIVAVLAY+GYDMEDAMILNKSSVERGMFHG IY
Sbjct: 735  QTPQTPIVRTRAYSEYSIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 794

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTETIDL E+  KSD++ R FR+S LDK     IDSDGLP++GQ I PDEPYCS YNE+T
Sbjct: 795  QTETIDLTEKGGKSDQSARVFRKSKLDKPCPS-IDSDGLPHVGQMIWPDEPYCSTYNEVT 853

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2333
            + T   K KGSEPV VDYVAVD K KKNL K NIRFR  RNPVIGDKFSSRHGQKGVCSQ
Sbjct: 854  NKTYLFKKKGSEPVYVDYVAVDTKTKKNLNKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQ 913

Query: 2334 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 2513
            LW DIDMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF DATPF SS 
Sbjct: 914  LWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDATPFRSSV 973

Query: 2514 AHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRH 2693
                E   S+S+SLVDELG ML+ +GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLRH
Sbjct: 974  KKDDEESGSKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYYQRLRH 1033

Query: 2694 MVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDH 2873
            MVSDK+QVRSTGT+DQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT SD+
Sbjct: 1034 MVSDKYQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDY 1093

Query: 2874 HIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYVF 3053
            HIADVCS+CGS+LTTT  Q +KR +REIGGLPPARAP+KV C +C++SKGME VAMPY+F
Sbjct: 1094 HIADVCSICGSMLTTTFQQPRKRPVREIGGLPPARAPRKVTCHACQSSKGMEKVAMPYIF 1153

Query: 3054 RYLATELAAMNIKMTLQLS 3110
            RYLA ELAAMNIKMTL+L+
Sbjct: 1154 RYLAAELAAMNIKMTLKLT 1172


>gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RPA2 [Morus notabilis]
          Length = 1243

 Score = 1585 bits (4104), Expect = 0.0
 Identities = 788/1079 (73%), Positives = 890/1079 (82%), Gaps = 45/1079 (4%)
 Frame = +3

Query: 6    GADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDKA 185
            GAD +KLV+ KEE SEMGGYFILNGLERVVRLLILPKRNYP SMVRNSFR+RR+GYTDKA
Sbjct: 92   GADPQKLVASKEEDSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRRQGYTDKA 151

Query: 186  VVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSLT 365
            V IRCVRED S+V++++YYL NGSARLGFW+ GREYLLPVG+VLKAL DT+D EIY SLT
Sbjct: 152  VGIRCVREDQSSVSVRVYYLRNGSARLGFWVHGREYLLPVGIVLKALVDTTDREIYASLT 211

Query: 366  CCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKEK 545
            CCY EKY   KG VGTQL+GERA+IILDEV ALSL+TR +CLEHIG+HFQPVM G E + 
Sbjct: 212  CCYSEKYGKGKGVVGTQLLGERAQIILDEVRALSLYTRIECLEHIGEHFQPVMEGFENKS 271

Query: 546  PTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPGH 725
             + VA++VL++YIFVHL NN+DKFNLL++M+QKLFSL+DQTSVPDNPDSLQN E+LLPGH
Sbjct: 272  FSVVAESVLKDYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDSLQNHEVLLPGH 331

Query: 726  LITIYLKEKLQEWLLKVKRQLQDE-TDNNKKFEFTNLADIKKVIDKNSPKQISSAIENML 902
            LI IYLKEKL++WL K K+ LQDE T+  K F+F +L  +KKV+DKN  KQISSA+ENML
Sbjct: 332  LIAIYLKEKLEDWLSKAKKLLQDEITNKGKSFDFCSLVQVKKVMDKNPAKQISSAVENML 391

Query: 903  KTGRLATQSGLDLQQ-----------------------------------------RAGM 959
            KTGRLATQ+GLDLQQ                                         RAG 
Sbjct: 392  KTGRLATQTGLDLQQKGWVDNLVALSKVSLSKKDGCLGVRNLLKKESGIIVEMVVERAGF 451

Query: 960  TVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNH 1139
            TVQAERLN+LRFLSHFRAVHRG SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNH
Sbjct: 452  TVQAERLNYLRFLSHFRAVHRGTSFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNH 511

Query: 1140 MTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXXPKLVHAGPPKVLSVLLDGRI 1319
            +T TCRITS++DS+GN +DFFK+RM               PKLV AGPP+VLSVLLDGRI
Sbjct: 512  LTCTCRITSYFDSQGNNKDFFKIRMSILSVLVEVGMSPSLPKLVQAGPPEVLSVLLDGRI 571

Query: 1320 VGSIPIEMVEKAVSHLRRLKLS--AMIPEDLEVGYVPLSTCGTYPGLYLFTCPSRFIRPV 1493
            VGSI   ++EK V+HLRRLK+S  + IP+DLEVGYVPLS  GTYPGLYLFT P RF+RPV
Sbjct: 572  VGSISSSVIEKVVAHLRRLKVSPASEIPDDLEVGYVPLSMGGTYPGLYLFTSPCRFVRPV 631

Query: 1494 KNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVFPATHEEIHPTGFLSVVANLT 1673
            KNIS+PS  +  +ELIGPFEQV+MEI CPDGGDGGR+D FPATHEEIHPTG LSVVANL 
Sbjct: 632  KNISIPSTDDQNIELIGPFEQVFMEIKCPDGGDGGRRDSFPATHEEIHPTGMLSVVANLI 691

Query: 1674 PWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHLQTPQTPIVRTKAYENYNIDD 1853
            PW +HNQSPRNMYQCQM KQTMGF  QA+H RADQKLYHLQTPQ+PIVRT  Y  YN+D 
Sbjct: 692  PWPNHNQSPRNMYQCQMAKQTMGFSLQALHCRADQKLYHLQTPQSPIVRTSTYTKYNMDA 751

Query: 1854 FPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIYQTETIDLVEQSSKSDRAGRT 2033
            +P GTNAIVAVLAY+GYDMEDAMILNKSSV+RGMFHG IYQTETIDL +QS++SDR    
Sbjct: 752  YPSGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMFHGQIYQTETIDLSDQSNRSDRVQSV 811

Query: 2034 FRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEITSSTCNTKLKGSEPVIVDYVA 2213
            FRRSN+D+S   LIDSDGLPY+GQ IKP+EP+CSIYNE+T  T   K KGSEPV+VDYVA
Sbjct: 812  FRRSNVDRSMHSLIDSDGLPYVGQTIKPNEPFCSIYNEVTGGTRTMKRKGSEPVVVDYVA 871

Query: 2214 VDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQLWSDIDMPFSAVTGMRPDLI 2393
            +DVKNK+ L+K NIRFR+ RNP+IGDKFSSRHGQKGVCSQLW DIDMPFS  TGMRPDLI
Sbjct: 872  IDVKNKQKLRKVNIRFRQPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGATGMRPDLI 931

Query: 2394 INPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSPAHASEGQKSE-SSSLVDELG 2570
            INPHAFPSRMTI MLLES+AAKGG++HGK++DATPF  S   A E   S+ S+SLVDELG
Sbjct: 932  INPHAFPSRMTIAMLLESVAAKGGSLHGKYVDATPFSGSLNEAKEETVSKHSTSLVDELG 991

Query: 2571 EMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITR 2750
            +MLR +GFNYHG EVLYSGVYGTEL CEIFIGPVYYQRLRHMVSDKFQVRSTG +DQ+TR
Sbjct: 992  QMLREKGFNYHGVEVLYSGVYGTELPCEIFIGPVYYQRLRHMVSDKFQVRSTGIIDQVTR 1051

Query: 2751 QPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLIQ 2930
            QP           FGEMERDS+LAHGAAYLLHDRLHT SD+HIA+VCSLCGSILTTT + 
Sbjct: 1052 QPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDYHIANVCSLCGSILTTTFLY 1111

Query: 2931 AQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYVFRYLATELAAMNIKMTLQL 3107
             QKR +REIGGLPP ++ +K  C +C TSKGMETVAMPYVFRYLA+ELAAMNIKMTLQL
Sbjct: 1112 QQKR-VREIGGLPPIKSSRKATCHACHTSKGMETVAMPYVFRYLASELAAMNIKMTLQL 1169


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score = 1579 bits (4088), Expect = 0.0
 Identities = 789/1040 (75%), Positives = 882/1040 (84%), Gaps = 5/1040 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            +GAD++KLVSLKEEA+EMGGYFILNGLERV R +ILPK+NYP SMVR+SFR+RREGYTDK
Sbjct: 130  QGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFRDRREGYTDK 189

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRCVR+D S+VTLKLYYL NGS RLGFW+QG+EYLLPVG+VLKAL DT+D EI+  L
Sbjct: 190  AVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDTNDLEIFNHL 249

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            TCCYDEKY   KG+VG+ LV ER KIIL EV  LSL TR QCL+HIG+HFQPV+ G++ E
Sbjct: 250  TCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQPVIDGLQSE 309

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
               AVA+ V+ +YIFVHL +N+DKFNLL++MLQKLFSLVD TSV DNPDSLQNQEILLPG
Sbjct: 310  SYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSLQNQEILLPG 369

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDNN-KKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            HLITIYLKEKL++WL K K+ +QDE +NN KKF+F NLA+IKKV++KN  KQI ++IE M
Sbjct: 370  HLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSKQIGTSIETM 429

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGRLATQ+GLDLQQRAG TVQAERLNFLRF+S FRAVHRGASFAGLRTTSVRKLLPES
Sbjct: 430  LKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTTSVRKLLPES 489

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNHMTSTCR+ S+YDS+GNIRDF KMR                
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVLIGVGMIPSL 549

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLST 1433
            PKLV +GPP VLSVLLDGR+VG IP   +EK V+HLRRLK+SA  +IP+DLEVGYVPLS 
Sbjct: 550  PKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDLEVGYVPLSL 609

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             G YPGLYLFT P +F+RPV+NIS+PS +   +ELIGPFEQV+MEI CPDGGDGGR++ F
Sbjct: 610  GGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDGGDGGRRNAF 669

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEIHPTG LSVVANLTP+SDHNQSPRNMYQCQM KQTMGF  QA+  RADQKLYHL
Sbjct: 670  PATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKFRADQKLYHL 729

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            QTPQTPIVRT  Y  Y+ID++P GTNAIVAVLAY+GYDMEDAMILNKSSV+RGM HG IY
Sbjct: 730  QTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQIY 789

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTETIDL +  +K DR  + FRR+   KS   +IDSDGLPY+GQ I P EPYCSIY++ T
Sbjct: 790  QTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDKTT 849

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNL-QKANIRFRRTRNPVIGDKFSSRHGQKGVCS 2330
            +S      KGSE V VDYVAVD+KN KNL QKANIRFR TRNP+IGDKFSSRHGQKGVCS
Sbjct: 850  NSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCS 909

Query: 2331 QLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSS 2510
            QLW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF +S
Sbjct: 910  QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANS 969

Query: 2511 PAHAS-EGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRL 2687
                + +    ES SLVDELGEMLR  GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRL
Sbjct: 970  VKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRL 1029

Query: 2688 RHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSS 2867
            RHMVSDKFQVRSTGT+DQITRQP           FGEMERDSLLAHGAAYLLHDRLHT S
Sbjct: 1030 RHMVSDKFQVRSTGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1089

Query: 2868 DHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPY 3047
            D+H+ADVCSLCGS+LT T I  QKRAIREIGGLPPARAPKKV C +C+TSKGMETVAMPY
Sbjct: 1090 DYHVADVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPY 1149

Query: 3048 VFRYLATELAAMNIKMTLQL 3107
            VFRYLA ELAAMNIK+TLQL
Sbjct: 1150 VFRYLAAELAAMNIKITLQL 1169


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score = 1579 bits (4088), Expect = 0.0
 Identities = 789/1040 (75%), Positives = 882/1040 (84%), Gaps = 5/1040 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            +GAD++KLVSLKEEA+EMGGYFILNGLERV R +ILPK+NYP SMVR+SFR+RREGYTDK
Sbjct: 37   QGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFRDRREGYTDK 96

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRCVR+D S+VTLKLYYL NGS RLGFW+QG+EYLLPVG+VLKAL DT+D EI+  L
Sbjct: 97   AVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDTNDLEIFNHL 156

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            TCCYDEKY   KG+VG+ LV ER KIIL EV  LSL TR QCL+HIG+HFQPV+ G++ E
Sbjct: 157  TCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQPVIDGLQSE 216

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
               AVA+ V+ +YIFVHL +N+DKFNLL++MLQKLFSLVD TSV DNPDSLQNQEILLPG
Sbjct: 217  SYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSLQNQEILLPG 276

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDNN-KKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            HLITIYLKEKL++WL K K+ +QDE +NN KKF+F NLA+IKKV++KN  KQI ++IE M
Sbjct: 277  HLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSKQIGTSIETM 336

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGRLATQ+GLDLQQRAG TVQAERLNFLRF+S FRAVHRGASFAGLRTTSVRKLLPES
Sbjct: 337  LKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTTSVRKLLPES 396

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNHMTSTCR+ S+YDS+GNIRDF KMR                
Sbjct: 397  WGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVLIGVGMIPSL 456

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLST 1433
            PKLV +GPP VLSVLLDGR+VG IP   +EK V+HLRRLK+SA  +IP+DLEVGYVPLS 
Sbjct: 457  PKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDLEVGYVPLSL 516

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             G YPGLYLFT P +F+RPV+NIS+PS +   +ELIGPFEQV+MEI CPDGGDGGR++ F
Sbjct: 517  GGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDGGDGGRRNAF 576

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEIHPTG LSVVANLTP+SDHNQSPRNMYQCQM KQTMGF  QA+  RADQKLYHL
Sbjct: 577  PATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKFRADQKLYHL 636

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            QTPQTPIVRT  Y  Y+ID++P GTNAIVAVLAY+GYDMEDAMILNKSSV+RGM HG IY
Sbjct: 637  QTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQIY 696

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTETIDL +  +K DR  + FRR+   KS   +IDSDGLPY+GQ I P EPYCSIY++ T
Sbjct: 697  QTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDKTT 756

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNL-QKANIRFRRTRNPVIGDKFSSRHGQKGVCS 2330
            +S      KGSE V VDYVAVD+KN KNL QKANIRFR TRNP+IGDKFSSRHGQKGVCS
Sbjct: 757  NSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCS 816

Query: 2331 QLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSS 2510
            QLW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF +S
Sbjct: 817  QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANS 876

Query: 2511 PAHAS-EGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRL 2687
                + +    ES SLVDELGEMLR  GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRL
Sbjct: 877  VKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRL 936

Query: 2688 RHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSS 2867
            RHMVSDKFQVRSTGT+DQITRQP           FGEMERDSLLAHGAAYLLHDRLHT S
Sbjct: 937  RHMVSDKFQVRSTGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 996

Query: 2868 DHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPY 3047
            D+H+ADVCSLCGS+LT T I  QKRAIREIGGLPPARAPKKV C +C+TSKGMETVAMPY
Sbjct: 997  DYHVADVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPY 1056

Query: 3048 VFRYLATELAAMNIKMTLQL 3107
            VFRYLA ELAAMNIK+TLQL
Sbjct: 1057 VFRYLAAELAAMNIKITLQL 1076


>gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score = 1577 bits (4084), Expect = 0.0
 Identities = 777/1044 (74%), Positives = 883/1044 (84%), Gaps = 8/1044 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RGAD KKLVS KEEASEMGGYFILNGLERV+RLLILPKRNYP SMVR+SF +RREGYTDK
Sbjct: 130  RGADPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRREGYTDK 189

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRCVR D S+++++LYYL NGSARLGFW++GREYLLPVG+VLKAL DT+D EIYV+L
Sbjct: 190  AVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTTDREIYVNL 249

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            T CY+EKY   KG+VGTQLVGERAKIILDE+  LSLFTR QCLE+IG+HFQP+M  + K+
Sbjct: 250  TSCYNEKYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQPIMPELMKD 309

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
                VADAVL++ I VHL N+ DKFNLL++MLQKLFSL+DQTSVPDNPDSLQN E+LLPG
Sbjct: 310  SYAIVADAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            HLI++Y+KEKL++WL K K+ L DE    + KF+F+++A +KK++DKNS K +S+++EN+
Sbjct: 370  HLISLYIKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKLVSASVENL 429

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGRL TQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNHMT TCRITSF+DS+GNI+D+FK++                
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILMEVGMTSSL 549

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLST 1433
            PK+   GPP+ L+VLLDG +VG I    VEK V+++R LK+S+  +IP D+EVGYVPLS 
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPGDMEVGYVPLSM 609

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             G YPGLYLFT PSRF+RPVKNIS+PS    ++ELIGPFEQV+MEI C DGGDGGRK  F
Sbjct: 610  GGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCLDGGDGGRKSSF 669

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEIHPT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F SQ I HRADQKLYHL
Sbjct: 670  PATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHL 729

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            QTPQTPIVRT  Y  YNID+FP GTNAIVAVLAY+GYDMEDAMILNKSSVERGMFHG IY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTETIDL EQ  KSDR+ R FR+SN++K     IDSDGLP++GQ I+PDEPYCSIYNE+T
Sbjct: 790  QTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDSDGLPHVGQMIRPDEPYCSIYNEVT 849

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2333
            SST   K KGSE V VDYVAVDVKNKK++QK NIRFR  RNPVIGDKFSSRHGQKGVCSQ
Sbjct: 850  SSTQTYKRKGSEAVYVDYVAVDVKNKKHIQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQ 909

Query: 2334 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 2513
            LW D+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGG++ G+F+DATPF SS 
Sbjct: 910  LWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSST 969

Query: 2514 AHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRH 2693
                EG  S+S SLVD+LG +L+ +GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLRH
Sbjct: 970  KKDGEGSDSKSGSLVDDLGVLLKEKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRH 1029

Query: 2694 MVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDH 2873
            MVSDKFQVRSTGT+DQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT SD+
Sbjct: 1030 MVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDY 1089

Query: 2874 HIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAP-----KKVMCISCRTSKGMETVA 3038
            HIADVCSLCGS+L+TT IQ QKR +R+IGGLPP R P     KKV C +C+TSKGMETVA
Sbjct: 1090 HIADVCSLCGSMLSTTFIQPQKRPVRQIGGLPPGRLPPGRAAKKVSCHACQTSKGMETVA 1149

Query: 3039 MPYVFRYLATELAAMNIKMTLQLS 3110
            MPYVFRYLA ELAAMNIKMTL+L+
Sbjct: 1150 MPYVFRYLAAELAAMNIKMTLKLN 1173


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score = 1538 bits (3983), Expect = 0.0
 Identities = 765/1040 (73%), Positives = 871/1040 (83%), Gaps = 4/1040 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RG D ++LVS KEEASEMGGYFILNGLERV+R +ILPKRNYP S VRNSFR+R+EGYTDK
Sbjct: 129  RGHDPQQLVSCKEEASEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEGYTDK 188

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRC R+D S+VT+KLYYL NGSARLG WIQG+E+LLPVGL+LKAL DT D+E+Y SL
Sbjct: 189  AVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALVDTPDNELYASL 248

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            TCCY  K++  KG+VGTQLVGERA+II++EV  L LFTR QCLE+IG+HFQP+M G+E E
Sbjct: 249  TCCYPGKFEKGKGAVGTQLVGERAQIIINEVVELGLFTRGQCLENIGEHFQPLMSGLENE 308

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
              + V DAVL++YIFVHL  N DKFNLL++MLQKLFSL+DQTSV DNPDSLQNQE+LLPG
Sbjct: 309  SYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEVLLPG 368

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDE-TDNNKKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            HLITIYLKEKL++WL + K+ LQDE    N    F ++  +KKV+DKN  +QIS A+ENM
Sbjct: 369  HLITIYLKEKLEDWLQRTKKLLQDEIKKENNNINFGSVDSLKKVLDKNPTRQISLAVENM 428

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGR+ TQ+GLDLQQRAG +VQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES
Sbjct: 429  LKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 488

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNHMT TCRITS++D++GNIRDF K+RM               
Sbjct: 489  WGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKIRMSILNVLIEVGMIPSL 548

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLST 1433
            P LVH G P  LSVLLDGR+VG I    VEK V+HLR+LK+SA  +IP+DLEVGYVPLS 
Sbjct: 549  PMLVHVGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYVPLSM 608

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             G YPGLYLFT PSRF+RPVKNIS+ + +   +ELIGPFEQV+MEI CPDG DGGRKD F
Sbjct: 609  GGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIKCPDGRDGGRKDAF 668

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEIHPTG LSVVANLTPWS+HNQSPRNMYQCQM KQTMGF  QA+ +RADQKLYHL
Sbjct: 669  PATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQKLYHL 728

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            +TPQ+PIVRTK Y NY +D++P GTNAIVAVL+Y+GYDMEDAMIL+KSSV+RGMFHG +Y
Sbjct: 729  KTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDRGMFHGLVY 788

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTE++DL +Q  +S  + R+FRRS  DKS   LIDSDGLPY+GQ I PDEPY SIY+E+ 
Sbjct: 789  QTESVDLSDQKGRSG-SQRSFRRSAADKSHHSLIDSDGLPYVGQTINPDEPYYSIYDEVK 847

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2333
             +   TK KGSEP IVDYVA+D   KK+LQK NIRFR  RNP+IGDKFSSRHGQKGVCSQ
Sbjct: 848  GAIRTTKRKGSEPAIVDYVAID--GKKHLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQ 905

Query: 2334 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 2513
            LW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF +S 
Sbjct: 906  LWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFANSE 965

Query: 2514 AHASEGQKSE-SSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLR 2690
               +E    E S +LVDELGEML+ +GFNY+G EVLYSGVYGTELTCEIFIGPVYYQRLR
Sbjct: 966  KKVNEETNGEKSKTLVDELGEMLKVKGFNYYGAEVLYSGVYGTELTCEIFIGPVYYQRLR 1025

Query: 2691 HMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSD 2870
            HMVSDKFQVRSTG VDQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT SD
Sbjct: 1026 HMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSD 1085

Query: 2871 HHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYV 3050
            +HIADVCSLCGSILTT+ +Q Q   +REI G+PP RAPKKV C +C+TSKGMETVAMPYV
Sbjct: 1086 YHIADVCSLCGSILTTSSVQPQV-PVREIPGMPPMRAPKKVTCHACKTSKGMETVAMPYV 1144

Query: 3051 FRYLATELAAMNIKMTLQLS 3110
            FRYLA ELAAMNIK+ LQLS
Sbjct: 1145 FRYLAAELAAMNIKLNLQLS 1164


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score = 1533 bits (3968), Expect = 0.0
 Identities = 764/1040 (73%), Positives = 869/1040 (83%), Gaps = 4/1040 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RG D ++LV  KEE+SEMGGYFILNGLERV+R +ILPKRNYP S VRNSFR+R+EGYTDK
Sbjct: 131  RGHDPQQLVYCKEESSEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEGYTDK 190

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRC R+D S+VT+KLYYL NGSARLG WIQG+E+LLPVGL+LKAL DT D+E+Y SL
Sbjct: 191  AVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALIDTPDNELYASL 250

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            TCCY EK++  KG+VGTQLVGERA+II++EV  L LFTR QCLEHIG+HFQP+M G+E E
Sbjct: 251  TCCYPEKFEKGKGAVGTQLVGERAQIIINEVVDLGLFTRGQCLEHIGEHFQPLMGGLENE 310

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
              + V DAVL++YIFVHL  N DKFNLL++MLQKLFSL+DQTSV DNPDSLQNQE+LLPG
Sbjct: 311  PYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEVLLPG 370

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDE-TDNNKKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            HLITIYLKEKL++WL + K+ LQDE    +    F ++  +KKV+DKN  +QIS A+ENM
Sbjct: 371  HLITIYLKEKLEDWLQRTKKLLQDEIKKESNNINFGSVDSLKKVLDKNPTRQISLAVENM 430

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGR+ TQ+GLDLQQRAG +VQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES
Sbjct: 431  LKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 490

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNHMT TCRITS++D++GNIRDF KM+M               
Sbjct: 491  WGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKMQMSILNVLIEVGMIPSL 550

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLST 1433
            P LVHAG P  LSVLLDGR+VG I    VEK V+HLR+LK+SA  +IP+DLEVGYVPLS 
Sbjct: 551  PMLVHAGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYVPLSM 610

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             G YPGLYLFT PSRF+RPVKNIS+ + +   +ELIGPFEQV+MEI CPDG DGGRKD F
Sbjct: 611  GGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIRCPDGRDGGRKDAF 670

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEIHPTG LSVVANLTPWS+HNQSPRNMYQCQM KQTMGF  QA+ +RADQKLYHL
Sbjct: 671  PATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQKLYHL 730

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            +TPQ+PIVRTK Y NY +D++P GTNAIVAVL+Y+GYDMEDAMIL+KSSV+RGMFHG +Y
Sbjct: 731  KTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDRGMFHGLVY 790

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTE+IDL +Q  +S  + R+FRRS  DKS   LIDSDGLPY+GQ IKPDEPY S Y+E+ 
Sbjct: 791  QTESIDLSDQKGRSG-SQRSFRRSAADKSYHSLIDSDGLPYVGQTIKPDEPYYSTYDEVK 849

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2333
             +   TK KGSEP IVDYVA+D   KK LQK NIRFR  RNP+IGDKFSSRHGQKGVCSQ
Sbjct: 850  GAIRTTKRKGSEPAIVDYVAID--GKKQLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQ 907

Query: 2334 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 2513
            LW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGK++DATPF +S 
Sbjct: 908  LWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYVDATPFANSE 967

Query: 2514 AHASEGQKSE-SSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLR 2690
                E    E S +LVDELGEML+ +GFNY+G EVLYSGVYGTELTCEIFIGPVYYQRLR
Sbjct: 968  KKVKEETNGEKSKTLVDELGEMLKVKGFNYNGAEVLYSGVYGTELTCEIFIGPVYYQRLR 1027

Query: 2691 HMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSD 2870
            HMVSDKFQVRSTG VDQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT SD
Sbjct: 1028 HMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSD 1087

Query: 2871 HHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYV 3050
            +HIADVCSLCGSILTT+ +Q   R + EI G+PP RAPKKV C +C+TSKGMETVAMPYV
Sbjct: 1088 YHIADVCSLCGSILTTSSVQPPVR-VCEIPGMPPMRAPKKVTCHACKTSKGMETVAMPYV 1146

Query: 3051 FRYLATELAAMNIKMTLQLS 3110
            FRYLA ELAAMNIK+ LQLS
Sbjct: 1147 FRYLAAELAAMNIKLNLQLS 1166


>gb|EOY19646.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 1074

 Score = 1524 bits (3946), Expect = 0.0
 Identities = 749/999 (74%), Positives = 847/999 (84%), Gaps = 3/999 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            R AD +KLV+ KEE+ EMGGYFILNGLERVVRLLILPKRNYP S+VRNSFR+RREGYTDK
Sbjct: 10   READPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREGYTDK 69

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVVIRCVR DLS+VT+KLYYL NGSARLGFW+QGREY+LPVG++LKAL DT+D EIY  L
Sbjct: 70   AVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTNDREIYTKL 129

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
            TCCY+EK    KG+VGTQLVGERAKIILDEV  L+LFT+EQCL+HIG+HFQP+M GME E
Sbjct: 130  TCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPIMEGMESE 189

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
              + VAD VL  YIFVHL +N+DKFNLL++M+QKLFSL+DQTS PDN DSLQNQE+LLPG
Sbjct: 190  SYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQNQEVLLPG 249

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            HLITIYLKEKL++WL K K+ ++D  +N +K F+F ++ D+KKV++KN P Q+S+AIEN+
Sbjct: 250  HLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQVSAAIENL 309

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTGRL TQ+GLDLQQRAG TVQAERLN+ RFLS FR VHRGASFAGLRTTSVRKLLPES
Sbjct: 310  LKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSVRKLLPES 369

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDGEPCGLLNHMT TCRITS+Y+S GNIRDFFK+RM               
Sbjct: 370  WGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVGVGMTTSW 429

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLST 1433
            PK+ HAGPP+VL VLLDGR+VGS+P    EK V+HLRRLKL+A  +IP+DLEVGYVPLS 
Sbjct: 430  PKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLEVGYVPLSL 489

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             GTYPGLYLFT PSRF+RPV+NIS+PS     +ELIGPFEQV+MEI CPDGG+GGR ++F
Sbjct: 490  GGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIRCPDGGNGGRSNIF 549

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEI PT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F  QAI+ RADQKLYHL
Sbjct: 550  PATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAINARADQKLYHL 609

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            QTPQTPIVRTK Y  Y +D++P GTNAIVAVLAY+GYDMEDAMILNKSSVERGM HG IY
Sbjct: 610  QTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIY 669

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTETIDL +  SKSDR  R F+R + D+S    +DSDGLP++GQ I+P+EPYCS  N++T
Sbjct: 670  QTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPYCSTINQVT 729

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2333
            +S      KGSE VIVDYVAVD K+KK+LQKANIRFR  RNPVIGDKFSSRHGQKGVCSQ
Sbjct: 730  NSKRLYNHKGSETVIVDYVAVDTKSKKHLQKANIRFRHPRNPVIGDKFSSRHGQKGVCSQ 789

Query: 2334 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 2513
            LW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF  S 
Sbjct: 790  LWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDSV 849

Query: 2514 AHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRH 2693
              A    ++ES SLVDELG MLRA GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLRH
Sbjct: 850  KEAKGKTEAESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRH 909

Query: 2694 MVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDH 2873
            MVSDK+QVR+TG VDQITRQP           FGEMERD++LAHGAAYLLHDRLHT SD+
Sbjct: 910  MVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDY 969

Query: 2874 HIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKK 2990
            HIADVCSLCGSILTT+++Q  KR +REIGGLPPARAPKK
Sbjct: 970  HIADVCSLCGSILTTSIVQPPKRVVREIGGLPPARAPKK 1008


>ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X2 [Glycine max]
          Length = 1004

 Score = 1518 bits (3930), Expect = 0.0
 Identities = 745/996 (74%), Positives = 843/996 (84%), Gaps = 3/996 (0%)
 Frame = +3

Query: 132  SMVRNSFRERREGYTDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGL 311
            SMVRNSF +RREGYTDKA+VIRCVR D S+++++LYYL NGSARLGFW++GREYLLPVG+
Sbjct: 2    SMVRNSFSDRREGYTDKAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGI 61

Query: 312  VLKALADTSDHEIYVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCL 491
            +LKAL DT+D EIYV+LT CY+EKY+  KG+VGTQLVGERAKIILDE+  LSLFTR QCL
Sbjct: 62   ILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCL 121

Query: 492  EHIGKHFQPVMVGMEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTS 671
            E+IG+HFQPV+  ++ +    VA+AVL++ I VHL NN DKFNLL++MLQKLFSL+DQTS
Sbjct: 122  EYIGEHFQPVITELKNDSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTS 181

Query: 672  VPDNPDSLQNQEILLPGHLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKK 848
            VPDNPDSLQN E+LLPGHLIT+YLKEKL++WL K KR L DE D  +KKF+F+++  +KK
Sbjct: 182  VPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKK 241

Query: 849  VIDKNSPKQISSAIENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGA 1028
            V+DKNSPKQ+S+A+ENMLKTGRL TQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGA
Sbjct: 242  VMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGA 301

Query: 1029 SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKM 1208
            SFAGLRTT+VRKLLPESWGFLCPVHTPDGEPCGLLNHMT T RITSF+DS+GN++D+FK+
Sbjct: 302  SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKI 361

Query: 1209 RMXXXXXXXXXXXXXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLS- 1385
            +M               PK+   GPP+ L+VLLDG +VG I     EK V+H+R LK+S 
Sbjct: 362  KMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSS 421

Query: 1386 -AMIPEDLEVGYVPLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVY 1562
             A+IP+D+EVGYVPLS  G YPGLYL T PSRF+RPV+NIS+PS     +E IGPFEQV+
Sbjct: 422  AAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVF 481

Query: 1563 MEISCPDGGDGGRKDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMG 1742
            MEI CPDGGDGGRK  FPATHEEIHPT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM 
Sbjct: 482  MEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMA 541

Query: 1743 FPSQAIHHRADQKLYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAM 1922
            F SQ I HRADQKLYHLQTPQTPIVRT  Y  YNID+FP GTNAIVAVLAY+GYDMEDAM
Sbjct: 542  FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAM 601

Query: 1923 ILNKSSVERGMFHGHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIG 2102
            ILNKSSVERGMFHG IYQTETIDL EQ  + DR+ R FR+SNL+KS+   IDSDGLP++G
Sbjct: 602  ILNKSSVERGMFHGQIYQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVG 661

Query: 2103 QRIKPDEPYCSIYNEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPV 2282
            Q I+PDEPYCSIYNE+TSS    K KGSE V VDYVAVDVKNKK+LQK NIRFR  RNPV
Sbjct: 662  QMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAVDVKNKKHLQKVNIRFRHPRNPV 721

Query: 2283 IGDKFSSRHGQKGVCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKG 2462
            IGDKFSSRHGQKGVCSQLW D+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKG
Sbjct: 722  IGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKG 781

Query: 2463 GAIHGKFIDATPFGSSPAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTE 2642
            G++ G+F+DATPF SS    S    S S S+VD+LG +LR +GFNYHG EVLYSGVYGTE
Sbjct: 782  GSLRGEFVDATPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTE 841

Query: 2643 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLA 2822
            LTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+TRQP           FGEMERDSLLA
Sbjct: 842  LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLA 901

Query: 2823 HGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCI 3002
            HGAAYLLHDRLHT SD+HIADVCSLCGS+LTTT  Q QKR +REIGGLPP RAPKKV C 
Sbjct: 902  HGAAYLLHDRLHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCH 961

Query: 3003 SCRTSKGMETVAMPYVFRYLATELAAMNIKMTLQLS 3110
            +C+TSKGMETVAMPYVFRYLA ELAAMNIKMTL+LS
Sbjct: 962  ACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLS 997


>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
            gi|482575323|gb|EOA39510.1| hypothetical protein
            CARUB_v10008127mg [Capsella rubella]
          Length = 1171

 Score = 1508 bits (3905), Expect = 0.0
 Identities = 736/1042 (70%), Positives = 865/1042 (83%), Gaps = 6/1042 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RGAD +KL+  KE  SEMGGYF+LNG+ERV R +I PKRN+PTSM+RNSFR+RREGY+DK
Sbjct: 121  RGADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSMIRNSFRDRREGYSDK 180

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AV IRCVR+D S+VT+KLYYL NGSAR+GFWI GREYLLPVGLVLKAL  T+D E+Y SL
Sbjct: 181  AVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVLKALTKTNDEEVYKSL 240

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
             CCY+E Y    G++GTQLV ERAK+ILDEV  + LFTREQC +H+G+HFQPV+ G+EKE
Sbjct: 241  NCCYNENYGRGDGAIGTQLVRERAKVILDEVRDMGLFTREQCRKHLGEHFQPVLDGLEKE 300

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
                VA+AVL +YIFVHL N+HDKFNLL++++QKL+SLVDQTS+PDNPDSLQNQEIL+PG
Sbjct: 301  SYPTVAEAVLRDYIFVHLDNDHDKFNLLIFLIQKLYSLVDQTSLPDNPDSLQNQEILVPG 360

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDE---TDNNKKFEFTNLADIKKVIDKNSPKQISSAIE 893
            HLIT+YLKEKL+EWL K K  L+DE   T +  KF F +LAD+KK+ +KN P+ +  +IE
Sbjct: 361  HLITVYLKEKLEEWLRKCKSLLKDELHNTSSKSKFSFESLADVKKLFNKNPPRSVGMSIE 420

Query: 894  NMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLP 1073
             +LKTGR+ TQSGLDLQQRAG TVQAERLNFLRFLS FRAVHRGASFAGLRTT+VRKLLP
Sbjct: 421  TLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLP 480

Query: 1074 ESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXX 1253
            ESWGFLCPVHTPDGEPCGLLNHMT T RITS +DSKGNIRDF K+R              
Sbjct: 481  ESWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVEVLIGAGMVS 540

Query: 1254 XXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPL 1427
              PKLV A PP+V+ VLLDG++VG++   +V   VS+LRRLK+ A  +IPEDLEVGYVP 
Sbjct: 541  SLPKLVQAAPPEVIHVLLDGQVVGTLSSNLVTNVVSYLRRLKIEAPSVIPEDLEVGYVPT 600

Query: 1428 STCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKD 1607
            S  G+YPGLYL +CP+RFIRPVKNIS+PS    ++ELIGPFEQV+MEISCPDGG+GGR +
Sbjct: 601  SMGGSYPGLYLASCPARFIRPVKNISIPS---ESIELIGPFEQVFMEISCPDGGNGGRNN 657

Query: 1608 VFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLY 1787
              PATHEEIHPTG +SVVANLTPWSDHNQSPRNMYQCQM KQTM + +QA+  RADQK+Y
Sbjct: 658  SCPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKIY 717

Query: 1788 HLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGH 1967
            HLQTPQ+P+VRTK Y  Y+ID+ P GTNAIVAVLA++G+DMEDAMILNKSSVERGM HG 
Sbjct: 718  HLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMCHGQ 777

Query: 1968 IYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNE 2147
            IYQTE IDL +Q+S+ D   ++FRRS  DKS    ID+DGLPY+GQ+I PDEPY SIY+E
Sbjct: 778  IYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSTIDADGLPYVGQKIYPDEPYYSIYDE 837

Query: 2148 ITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVC 2327
            +T+     K KG++PVIVD+V+VD+K+KK+ QKANIRFR  RNP+IGDKFSSRHGQKGVC
Sbjct: 838  VTNRIRTIKRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGDKFSSRHGQKGVC 897

Query: 2328 SQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGS 2507
            SQLW DIDMPF+ VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF +
Sbjct: 898  SQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPFRN 957

Query: 2508 SPAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRL 2687
            +  +A+  +K +SS LVD+LG ML+ +GFNY+G E LYSG+ G EL CEIF+GPVYYQRL
Sbjct: 958  AVINANGEKKRKSSLLVDDLGSMLKEKGFNYYGTEKLYSGILGVELECEIFMGPVYYQRL 1017

Query: 2688 RHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSS 2867
            RHMVSDKFQVRSTG VDQ+T QP           FGEMERDSLLAHGA+YLLHDRLHTSS
Sbjct: 1018 RHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLHTSS 1077

Query: 2868 DHHIADVCSLCGSILTTTLIQA-QKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMP 3044
            DHHIADVCSLCGS+LT+++    QK+ I+  G LPP R PKKV C SC+TSKGMETVAMP
Sbjct: 1078 DHHIADVCSLCGSLLTSSIANVQQKKLIQVTGKLPPGRTPKKVTCYSCKTSKGMETVAMP 1137

Query: 3045 YVFRYLATELAAMNIKMTLQLS 3110
            YVFRYLA ELA+MNIKMTL+LS
Sbjct: 1138 YVFRYLAAELASMNIKMTLKLS 1159


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
            lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
            ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score = 1504 bits (3894), Expect = 0.0
 Identities = 741/1040 (71%), Positives = 864/1040 (83%), Gaps = 4/1040 (0%)
 Frame = +3

Query: 3    RGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDK 182
            RGAD +KL+  KE  SEMGGYFILNG+ERV R +I PKRN+PTSM+RNSFR+R+EGYT+K
Sbjct: 143  RGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRDRKEGYTEK 202

Query: 183  AVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSL 362
            AVV RCVR+D S+VT+KLYYL NGSAR+GFWI GREYLLPVGLVLKAL +T D EIY SL
Sbjct: 203  AVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNTCDEEIYESL 262

Query: 363  TCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKE 542
             CCY E Y    G++GTQL+ ERAKIILDEV  L LFTREQC +H+G+HFQPV+ G+EKE
Sbjct: 263  NCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGLEKE 322

Query: 543  KPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPG 722
                VA+AVL +Y+FVHL N+HDKFNLL++++QKL+SLVDQTS+PDNPDSLQNQEIL+PG
Sbjct: 323  SHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSLQNQEILVPG 382

Query: 723  HLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIENM 899
            H+ITIYLKEKL++WL K K  L+DE  N + KF F +LAD+KK+I+KN P+ I ++IE +
Sbjct: 383  HVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKKLINKNPPRSIGTSIETL 442

Query: 900  LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1079
            LKTG L TQSGLDLQQRAG TVQAERLNFLRFLS FRAVHRGASFAGLRTT+VRKLLPES
Sbjct: 443  LKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLPES 502

Query: 1080 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1259
            WGFLCPVHTPDG PCGLLNHMT T RITS +DSKGNIRDF K+R                
Sbjct: 503  WGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKIRKSVVEVLTGAGMVSSL 562

Query: 1260 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLST 1433
            PKLV AGPPKV+ VLLDG++VG++   +V K VS+LRRLK+ A  +IPEDLEVGYVP+S 
Sbjct: 563  PKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRRLKVEAPSVIPEDLEVGYVPISM 622

Query: 1434 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 1613
             G+YPGLYL +CP+RFIRPVKNIS+PS  EN +ELIGPFEQV+MEISCPDGG+GGR +  
Sbjct: 623  GGSYPGLYLASCPARFIRPVKNISIPS--EN-IELIGPFEQVFMEISCPDGGNGGRNNSS 679

Query: 1614 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 1793
            PATHEEIHPTG +SVVANLTPWSDHNQSPRNMYQCQM KQTM + +QA+  RADQK+YHL
Sbjct: 680  PATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKIYHL 739

Query: 1794 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 1973
            QTPQ+P+VRTK Y  Y+ID+ P GTNAIVAVLA++G+DMEDAMILNKSSVERGM HG IY
Sbjct: 740  QTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMCHGQIY 799

Query: 1974 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2153
            QTE IDL +Q+S+ D   ++FRRS  DKS    ID+DGLPY+GQ+I PDEPYC IY+E+T
Sbjct: 800  QTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSRIDADGLPYVGQKIYPDEPYCRIYDEVT 859

Query: 2154 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2333
                  K KG++PVIVD+V+VD+K+KK+ QKANIRFR  RNP+IGDKFSSRHGQKGVCSQ
Sbjct: 860  GKQRLMKGKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGDKFSSRHGQKGVCSQ 919

Query: 2334 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 2513
            LW DI+MPF+ VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF  + 
Sbjct: 920  LWPDIEMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPFRDAV 979

Query: 2514 AHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRH 2693
               +  ++S+SS LVD+LG ML+ +GFNY+G E LYSG  G EL CEIF+GPVYYQRLRH
Sbjct: 980  KKTNGEKESKSSLLVDDLGSMLKEKGFNYYGTETLYSGSLGVELKCEIFMGPVYYQRLRH 1039

Query: 2694 MVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDH 2873
            MVSDKFQVRSTG VDQ+T QP           FGEMERDSLLAHGA+YLLHDRLHTSSDH
Sbjct: 1040 MVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLHTSSDH 1099

Query: 2874 HIADVCSLCGSILTTTLIQA-QKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYV 3050
            HIADVCSLCGS+LT++++   QK+ I+  G LPP R PKKV C SC TSKGMETVAMPYV
Sbjct: 1100 HIADVCSLCGSLLTSSVVNVQQKKLIKVNGKLPPGRTPKKVTCHSCGTSKGMETVAMPYV 1159

Query: 3051 FRYLATELAAMNIKMTLQLS 3110
            FRYLA ELA+MNIKMTLQLS
Sbjct: 1160 FRYLAAELASMNIKMTLQLS 1179