BLASTX nr result
ID: Catharanthus23_contig00013203
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00013203
(933 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355631.1| PREDICTED: pentatricopeptide repeat-containi... 441 e-121
ref|XP_004233864.1| PREDICTED: pentatricopeptide repeat-containi... 435 e-119
ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containi... 413 e-113
emb|CBI30808.3| unnamed protein product [Vitis vinifera] 413 e-113
gb|EOY27823.1| Pentatricopeptide repeat (PPR) superfamily protei... 411 e-112
gb|EXB58304.1| hypothetical protein L484_015638 [Morus notabilis] 392 e-106
ref|XP_006467551.1| PREDICTED: pentatricopeptide repeat-containi... 391 e-106
ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|5... 379 e-102
ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containi... 369 e-100
ref|XP_004504222.1| PREDICTED: pentatricopeptide repeat-containi... 367 5e-99
gb|ESW31536.1| hypothetical protein PHAVU_002G246300g [Phaseolus... 358 2e-96
ref|XP_003629914.1| Pentatricopeptide repeat-containing protein ... 358 2e-96
ref|XP_006449607.1| hypothetical protein CICLE_v10018369mg [Citr... 357 3e-96
gb|EMJ15803.1| hypothetical protein PRUPE_ppa003001mg [Prunus pe... 352 9e-95
ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containi... 352 1e-94
ref|XP_002865191.1| pentatricopeptide repeat-containing protein ... 335 1e-89
ref|XP_006398338.1| hypothetical protein EUTSA_v10000805mg [Eutr... 335 2e-89
ref|NP_199458.1| pentatricopeptide repeat-containing protein [Ar... 330 6e-88
ref|XP_006282004.1| hypothetical protein CARUB_v10028231mg [Caps... 328 2e-87
ref|XP_004301528.1| PREDICTED: pentatricopeptide repeat-containi... 322 2e-85
>ref|XP_006355631.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Solanum tuberosum]
Length = 688
Score = 441 bits (1133), Expect = e-121
Identities = 211/311 (67%), Positives = 250/311 (80%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VFG+M+R G+ PNQSSFTSALNS CEME ID GK IHG AVKLGL TD FVGNSLVVLYS
Sbjct: 304 VFGDMIRIGLLPNQSSFTSALNSSCEMESIDLGKEIHGVAVKLGLNTDAFVGNSLVVLYS 363
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
KCGNI DG+ FKEI KNIVSWNSIIVGCAQHG NWALT F+QM+R+ DDITFTG
Sbjct: 364 KCGNIDDGLIAFKEIPEKNIVSWNSIIVGCAQHGFGNWALTLFAQMVRSRADMDDITFTG 423
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LL+ACSHSGM KGR+ F+Y+ +S + E LEHY+CM+D+LCRSG+L EAE+LVK+MP+R
Sbjct: 424 LLAACSHSGMLEKGRRLFQYIPQSSSIEVTLEHYSCMVDILCRSGKLNEAEDLVKSMPMR 483
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
N+S+WLALL+GC+K N+ELAER A+ IF+LDP+CS+A VLLSNIYAF+G+W+DVARVR
Sbjct: 484 PNLSIWLALLSGCKKHLNLELAERAAENIFHLDPNCSAAYVLLSNIYAFSGRWNDVARVR 543
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
M++ G KQ GCSWV QKG++H F+SGD SHPL IY G+VPDQR
Sbjct: 544 GNMRRRGNTKQPGCSWVNQKGIRHTFLSGDTSHPLNDGIYEKLEWLTEKLKEYGYVPDQR 603
Query: 901 FALHDVEDEQK 933
+ALHDVEDEQK
Sbjct: 604 YALHDVEDEQK 614
Score = 80.5 bits (197), Expect = 8e-13
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
+F M+ I P S+F S + +C + G IH VKLG D +V SL+ LY+
Sbjct: 203 IFKKMLDFFIEPTSSTFASVITACANARDLGLGSEIHACVVKLGYLYDTYVTASLITLYA 262
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C ++ D F E + NIV W S++ G + AL F MIR G+ P+ +FT
Sbjct: 263 NCMHMDDSSKVFSERLHINIVVWTSLLTGYGLNYKHKEALKVFGDMIRIGLLPNQSSFTS 322
Query: 361 LL-SACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPV 537
L S+C + ++ T+A + + +L C G +++ K +P
Sbjct: 323 ALNSSCEMESIDLGKEIHGVAVKLGLNTDAFVGNSLVVLYSKC--GNIDDGLIAFKEIPE 380
Query: 538 RANMSMWLALLNGC 579
+ N+ W +++ GC
Sbjct: 381 K-NIVSWNSIIVGC 393
>ref|XP_004233864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Solanum lycopersicum]
Length = 688
Score = 435 bits (1118), Expect = e-119
Identities = 208/311 (66%), Positives = 248/311 (79%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VFG+M+R G+ PNQSSFTSALNS CEME ID GK IHG AVKLGL TD FVGNSLVVLYS
Sbjct: 304 VFGDMIRIGLLPNQSSFTSALNSSCEMESIDLGKEIHGVAVKLGLNTDAFVGNSLVVLYS 363
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
KCGNI DG+ FKEI KN VSWNS IVGCAQHG NWALT F+QM+R+ DDITFTG
Sbjct: 364 KCGNINDGLIAFKEIPEKNTVSWNSTIVGCAQHGFGNWALTLFAQMVRSRADMDDITFTG 423
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LL+ACSHSGM KGR+ F+Y+ +S + E LEHY+CM+D+LCRSG+L EAE+LVK+MP+R
Sbjct: 424 LLAACSHSGMLEKGRRLFQYIPQSSSIEVTLEHYSCMVDILCRSGKLNEAEDLVKSMPMR 483
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
N+S+WLALL+GC+K N+ELAER A IF+LDP+CS+A VLLSNIYAF+G+W+DVARVR
Sbjct: 484 PNLSIWLALLSGCKKHLNLELAERAADNIFHLDPNCSAAYVLLSNIYAFSGRWNDVARVR 543
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
M++ G KQ GCSWV Q G++H F+SGD SHPL++ IY G+VPDQR
Sbjct: 544 GNMRRRGNTKQPGCSWVNQMGIRHTFLSGDTSHPLSRRIYEKLEMLTEKLKEYGYVPDQR 603
Query: 901 FALHDVEDEQK 933
+ALHDVEDEQK
Sbjct: 604 YALHDVEDEQK 614
Score = 80.5 bits (197), Expect = 8e-13
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
+F MV I P S+F S + +C + G IH VKLG D +V SL+ LY+
Sbjct: 203 IFKKMVNFFIEPTSSTFASVITACANARDLGLGSEIHACVVKLGYQYDTYVTASLITLYA 262
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C + D F E + NIV W S++ G + AL F MIR G+ P+ +FT
Sbjct: 263 NCMRMNDSSKVFSERLHINIVVWTSLLTGYGLNYKHKEALKVFGDMIRIGLLPNQSSFTS 322
Query: 361 LL-SACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPV 537
L S+C + ++ T+A + + +L C G + + K +P
Sbjct: 323 ALNSSCEMESIDLGKEIHGVAVKLGLNTDAFVGNSLVVLYSKC--GNINDGLIAFKEIPE 380
Query: 538 RANMSMWLALLNGC 579
+ +S W + + GC
Sbjct: 381 KNTVS-WNSTIVGC 393
>ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 413 bits (1061), Expect = e-113
Identities = 198/311 (63%), Positives = 242/311 (77%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VFG M+R G+ PNQSSFTSALNSCC +E +D G+ IH AAVKLGL TDVFVGNSL+V+Y
Sbjct: 291 VFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYY 350
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
+CGN+ DG+ FK I KNIVSWNS+IVGCAQHGC WAL FF+QM+R+ V PD+ITFTG
Sbjct: 351 RCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTG 410
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACSHSGMS+KGR F+Y ++K+ E KL+HYACM+D+L RSG+LEEAE L++NMPV+
Sbjct: 411 LLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVK 470
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WL LL+ C S +E+AER AK I L+PHCSSA VLLSN+YA A +WSDV+R+R
Sbjct: 471 ANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIR 530
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK+ G KQ G SW+T KG ++ F+SGDRSHP + IY G+VPDQR
Sbjct: 531 REMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQR 590
Query: 901 FALHDVEDEQK 933
FALHDVEDEQK
Sbjct: 591 FALHDVEDEQK 601
Score = 74.3 bits (181), Expect = 6e-11
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 6/190 (3%)
Frame = +1
Query: 28 IPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYSKCGNICDGI 207
+ P S++ + +C + QG IH KLG D ++ +L+ Y+ C + D +
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258
Query: 208 ATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTGLLSACSHSG 387
F + N+V W +++ G + AL F +M+R GV P+ +FT L++C
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCC--- 315
Query: 388 MSRKGRKTFEYLRKSKTTEAKLEHYA------CMLDLLCRSGELEEAENLVKNMPVRANM 549
G + ++ R+ T KL ++ + R G L + + K + + N+
Sbjct: 316 ----GLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNI 370
Query: 550 SMWLALLNGC 579
W +++ GC
Sbjct: 371 VSWNSVIVGC 380
Score = 60.8 bits (146), Expect = 7e-07
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Frame = +1
Query: 46 SFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYSKCGNICDGIATFKEI 225
S+T+ +N + I+ +G+ K+ D+ NS++ Y G + DG+ F+E+
Sbjct: 106 SWTTMINGFLQFGKIEVAEGLF---YKMPF-RDIAAWNSMIYGYCCNGRVEDGLRLFQEM 161
Query: 226 VAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAG--VYPDDITFTGLLSACSHSGMSRK 399
+N++SW S+I G QHG AL F QM+ G V P T+ +++AC+++ +
Sbjct: 162 PCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQ 221
Query: 400 GRKTFEYLRK-SKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVRANMSMWLALLNG 576
G + ++ K + +A + A ++ ++E++ V + + N+ +W AL+ G
Sbjct: 222 GVQIHAHVFKLGYSFDAYIS--AALITFYANCKQMEDSLR-VFHGKLHMNVVIWTALVTG 278
>emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 413 bits (1061), Expect = e-113
Identities = 198/311 (63%), Positives = 242/311 (77%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VFG M+R G+ PNQSSFTSALNSCC +E +D G+ IH AAVKLGL TDVFVGNSL+V+Y
Sbjct: 275 VFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYY 334
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
+CGN+ DG+ FK I KNIVSWNS+IVGCAQHGC WAL FF+QM+R+ V PD+ITFTG
Sbjct: 335 RCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTG 394
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACSHSGMS+KGR F+Y ++K+ E KL+HYACM+D+L RSG+LEEAE L++NMPV+
Sbjct: 395 LLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVK 454
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WL LL+ C S +E+AER AK I L+PHCSSA VLLSN+YA A +WSDV+R+R
Sbjct: 455 ANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIR 514
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK+ G KQ G SW+T KG ++ F+SGDRSHP + IY G+VPDQR
Sbjct: 515 REMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQR 574
Query: 901 FALHDVEDEQK 933
FALHDVEDEQK
Sbjct: 575 FALHDVEDEQK 585
Score = 74.3 bits (181), Expect = 6e-11
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 6/190 (3%)
Frame = +1
Query: 28 IPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYSKCGNICDGI 207
+ P S++ + +C + QG IH KLG D ++ +L+ Y+ C + D +
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242
Query: 208 ATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTGLLSACSHSG 387
F + N+V W +++ G + AL F +M+R GV P+ +FT L++C
Sbjct: 243 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCC--- 299
Query: 388 MSRKGRKTFEYLRKSKTTEAKLEHYA------CMLDLLCRSGELEEAENLVKNMPVRANM 549
G + ++ R+ T KL ++ + R G L + + K + + N+
Sbjct: 300 ----GLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNI 354
Query: 550 SMWLALLNGC 579
W +++ GC
Sbjct: 355 VSWNSVIVGC 364
Score = 60.8 bits (146), Expect = 7e-07
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Frame = +1
Query: 46 SFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYSKCGNICDGIATFKEI 225
S+T+ +N + I+ +G+ K+ D+ NS++ Y G + DG+ F+E+
Sbjct: 90 SWTTMINGFLQFGKIEVAEGLF---YKMPF-RDIAAWNSMIYGYCCNGRVEDGLRLFQEM 145
Query: 226 VAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAG--VYPDDITFTGLLSACSHSGMSRK 399
+N++SW S+I G QHG AL F QM+ G V P T+ +++AC+++ +
Sbjct: 146 PCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQ 205
Query: 400 GRKTFEYLRK-SKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVRANMSMWLALLNG 576
G + ++ K + +A + A ++ ++E++ V + + N+ +W AL+ G
Sbjct: 206 GVQIHAHVFKLGYSFDAYIS--AALITFYANCKQMEDSLR-VFHGKLHMNVVIWTALVTG 262
>gb|EOY27823.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
Length = 717
Score = 411 bits (1057), Expect = e-112
Identities = 197/311 (63%), Positives = 241/311 (77%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VFG+M+R + PNQSSFTSALNSC +E +D+GK IH AVKLGL D FVGNSLVV+Y+
Sbjct: 332 VFGDMIRMSVLPNQSSFTSALNSCSGLETLDRGKEIHAVAVKLGLEADAFVGNSLVVMYT 391
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
CGN+ D +A F + KNIVSWNSIIVGCAQHG WALT F +MI A V PD+ITFTG
Sbjct: 392 VCGNVNDALAAFSSVDEKNIVSWNSIIVGCAQHGQGMWALTLFGRMIHAEVDPDEITFTG 451
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACSHSGM +KGR+ FEY+ + K+T KL+HY CM+D+L RSG+LEEAE L+KNM V+
Sbjct: 452 LLSACSHSGMLQKGRRFFEYISRYKSTAMKLQHYVCMVDVLGRSGKLEEAEELIKNMQVK 511
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN ++WLALL CR SN+E+AER AK I L+PHCS+A VLLSN+YA AG+WSDV+R+R
Sbjct: 512 ANSTVWLALLGACRMHSNLEVAERAAKSILDLEPHCSAAYVLLSNLYASAGRWSDVSRMR 571
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK+ G +KQ GCSWVT +GV+H FVSGD+SHP ++ IY G+VPD+R
Sbjct: 572 VRMKQRGIVKQPGCSWVTVRGVRHEFVSGDKSHPFSEEIYQKLDWLGGKLKEFGYVPDER 631
Query: 901 FALHDVEDEQK 933
FALHDVEDEQK
Sbjct: 632 FALHDVEDEQK 642
Score = 69.3 bits (168), Expect = 2e-09
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 1/193 (0%)
Frame = +1
Query: 4 FGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYSK 183
F MV + + S+F+ L +C + + G HG VKLG D F+ SL+ Y+
Sbjct: 232 FKKMVGCDVELSSSTFSCVLTACANVIALHLGVQTHGQIVKLGFCFDEFICASLLTFYAN 291
Query: 184 CGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTGL 363
C + F E + N+V W +++ G + AL F MIR V P+ +FT
Sbjct: 292 CKEMEYACKVFNEKLHGNVVIWTALLTGYGLNHRHESALMVFGDMIRMSVLPNQSSFTSA 351
Query: 364 LSACSHSGMSRKGRKTFEY-LRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
L++CS +G++ ++ +A + + ++ +C G + +A ++ +
Sbjct: 352 LNSCSGLETLDRGKEIHAVAVKLGLEADAFVGNSLVVMYTVC--GNVNDALAAFSSVDEK 409
Query: 541 ANMSMWLALLNGC 579
N+ W +++ GC
Sbjct: 410 -NIVSWNSIIVGC 421
Score = 58.9 bits (141), Expect = 3e-06
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +1
Query: 142 DVFVGNSLVVLYSKCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMI 321
DV NS++ Y K G + + ++ F+++ +N++SW ++I G +G + AL FF +M+
Sbjct: 177 DVAAWNSMIYGYLKFGRVEEAMSLFRKMPNRNVISWTAMIGGLDYNGRSDEALVFFKKMV 236
Query: 322 RAGVYPDDITFTGLLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYAC--MLDLLCRSG 495
V TF+ +L+AC++ G +T + K + + C +L
Sbjct: 237 GCDVELSSSTFSCVLTACANVIALHLGVQTHGQIVKLGFC---FDEFICASLLTFYANCK 293
Query: 496 ELEEAENLVKNMPVRANMSMWLALLNG 576
E+E A V N + N+ +W ALL G
Sbjct: 294 EMEYACK-VFNEKLHGNVVIWTALLTG 319
>gb|EXB58304.1| hypothetical protein L484_015638 [Morus notabilis]
Length = 694
Score = 392 bits (1006), Expect = e-106
Identities = 190/311 (61%), Positives = 234/311 (75%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF +M+ +G+ PNQSSFTSALN+CC +E +D+GK IH A+KLG+G D FVGN+L+V+YS
Sbjct: 309 VFRDMIASGVLPNQSSFTSALNACCGLEALDRGKEIHSVAIKLGMGNDSFVGNTLIVMYS 368
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
KCG+I GI+ F KNIVSWNS+I+GCAQHG ALT FSQM+RAG+ PD+ITFTG
Sbjct: 369 KCGSINHGISVFTRTNEKNIVSWNSVIMGCAQHGYGMLALTLFSQMMRAGIEPDEITFTG 428
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSAC HSGM +K R ++ + KT E EHYACM+DLL R G+LEEAE LV+NMP
Sbjct: 429 LLSACRHSGMLQKRRGFSKFFSQDKTFEVNQEHYACMVDLLGRCGKLEEAEELVRNMPFE 488
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WLALL CR SN+++AER AK +F LDPHCS+A VLLSNIYA A +WSDV+RVR
Sbjct: 489 ANSMVWLALLGACRLHSNLDVAERAAKSVFELDPHCSAAYVLLSNIYASANRWSDVSRVR 548
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
MK++G +KQ G SWVT KG++H F SGDRSHPL++ IY G+VPDQ+
Sbjct: 549 ETMKRNGIVKQPGSSWVTLKGLRHEFRSGDRSHPLSEKIYQKLDWLGVKLKEFGYVPDQQ 608
Query: 901 FALHDVEDEQK 933
FALHDVE EQK
Sbjct: 609 FALHDVEAEQK 619
Score = 74.7 bits (182), Expect = 5e-11
Identities = 41/124 (33%), Positives = 60/124 (48%)
Frame = +1
Query: 4 FGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYSK 183
F M +G P ++ AL + + + G IHG VKLG D F SL+ Y+
Sbjct: 209 FNRMTGSGFKPTSTTLVCALTASANIFALHLGLKIHGQIVKLGYCFDEFSYASLITFYAN 268
Query: 184 CGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTGL 363
C + FKE + KN+ W +++ G A + AL F MI +GV P+ +FT
Sbjct: 269 CKQVEHACKVFKEKMHKNVAVWTALVTGYALNCEPEKALEVFRDMIASGVLPNQSSFTSA 328
Query: 364 LSAC 375
L+AC
Sbjct: 329 LNAC 332
>ref|XP_006467551.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Citrus sinensis]
Length = 696
Score = 391 bits (1005), Expect = e-106
Identities = 188/311 (60%), Positives = 236/311 (75%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF +M+ G+ PNQS+F S LNSC ++E ID GK IH A+KLGL DVFVGNSLVV+YS
Sbjct: 311 VFSDMINLGVLPNQSTFVSVLNSCIKLEAIDHGKEIHTVAIKLGLVNDVFVGNSLVVMYS 370
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
+CGN+ D +A F++I KNIVSWNS+IVG AQHG ALT +SQMIR GV PD+ITFTG
Sbjct: 371 ECGNVIDAVAIFRKIDEKNIVSWNSMIVGSAQHGFGRLALTLYSQMIREGVDPDEITFTG 430
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACSHSGM +KGR FEY+ + K E KL+H+ACM+D+L R G+LEEAE L+KNMP +
Sbjct: 431 LLSACSHSGMLQKGRYFFEYISRYKPNEVKLQHFACMVDILGRGGKLEEAEELIKNMPPK 490
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WLALL+ CR SN E+AER AK+I L+PHCS+A VLLSN+YA AG+WSDV+R+R
Sbjct: 491 ANSMVWLALLSSCRMHSNAEVAERAAKEILDLEPHCSAAYVLLSNLYASAGRWSDVSRLR 550
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK+ G +KQ GCSWV KG +H F+SGDRSH L++ IY G+ P++
Sbjct: 551 VKMKQGGIVKQPGCSWVYLKGTRHEFLSGDRSHTLSEKIYEKLDWLGGKLKEFGYCPERS 610
Query: 901 FALHDVEDEQK 933
++LHDVEDEQK
Sbjct: 611 YSLHDVEDEQK 621
Score = 83.2 bits (204), Expect = 1e-13
Identities = 44/125 (35%), Positives = 64/125 (51%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF MV GI P ++ L C + + G IHG +K+G +D F+ SL+ Y+
Sbjct: 210 VFKKMVGYGILPTATTLACVLAGCANVLDLYLGLQIHGCVIKIGFSSDEFICASLITFYA 269
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C I D F E + KN+V W +++ G +G AL FS MI GV P+ TF
Sbjct: 270 NCKLIEDTSKVFNEKLHKNVVVWTALLTGNGLNGKHETALKVFSDMINLGVLPNQSTFVS 329
Query: 361 LLSAC 375
+L++C
Sbjct: 330 VLNSC 334
>ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|566152696|ref|XP_006369868.1| hypothetical protein
POPTR_0001s34330g [Populus trichocarpa]
gi|550348837|gb|ERP66437.1| hypothetical protein
POPTR_0001s34330g [Populus trichocarpa]
Length = 675
Score = 379 bits (972), Expect = e-102
Identities = 185/311 (59%), Positives = 234/311 (75%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VFG+M + G PNQS+F+ L +CC +E +D+GK IH A+KLGL TDVFVGNSLVV+Y+
Sbjct: 290 VFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYT 349
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
+CGN+ +A F+ I K+IVSWNSIIVG AQHG WAL FF+QMIR GV P++ITFTG
Sbjct: 350 ECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTG 409
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACS SGM KGR FEY+ + K+ + +HYACM+D+L R G+L+EAE LV+ MPV+
Sbjct: 410 LLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVK 469
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WLALL+ CR SN+E+AER AK I L+P+CSSA VLLSNIYA AG+W+DV+R+R
Sbjct: 470 ANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMR 529
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK+ G +KQ G SWV +G KH F+S DRSHPL++ IY G+VPDQ+
Sbjct: 530 VKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQK 589
Query: 901 FALHDVEDEQK 933
FALHDVEDEQK
Sbjct: 590 FALHDVEDEQK 600
Score = 77.4 bits (189), Expect = 7e-12
Identities = 42/136 (30%), Positives = 64/136 (47%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF M+R+G+ P S+F L++C + G +HG VKLG F+ SL+ Y+
Sbjct: 189 VFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYA 248
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C I F E + KN+V W +++ + AL F M + G P+ TF+
Sbjct: 249 NCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSI 308
Query: 361 LLSACSHSGMSRKGRK 408
L AC KG++
Sbjct: 309 TLKACCGLEALDKGKE 324
Score = 57.4 bits (137), Expect = 8e-06
Identities = 29/81 (35%), Positives = 50/81 (61%)
Frame = +1
Query: 142 DVFVGNSLVVLYSKCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMI 321
DV N++V Y + G + +G+ F+E+ ++++SW S+I G +G AL F +M+
Sbjct: 135 DVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKML 194
Query: 322 RAGVYPDDITFTGLLSACSHS 384
R+GV P TF +LSAC+++
Sbjct: 195 RSGVEPTWSTFACVLSACANA 215
>ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 369 bits (947), Expect = e-100
Identities = 178/311 (57%), Positives = 228/311 (73%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VFG M+R + PN+SSFTSALNSCC +E I++GK IH AAVK+GL + +VG SLVV+YS
Sbjct: 336 VFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYS 395
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
KCG + D + FK I KN+VSWNS+IVGCAQHGC WAL F+QM+R GV PD IT TG
Sbjct: 396 KCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTG 455
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACSHSGM +K R F Y + ++ +EHY M+D+L R GELEEAE +V +MP++
Sbjct: 456 LLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMK 515
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WLALL+ CRK SN++LA+R A QIF ++P CS+A VLLSN+YA + +W++VA +R
Sbjct: 516 ANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIR 575
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK +G +K+ G SW+T KG KH F+S DRSHPL + IY G+VPDQ+
Sbjct: 576 RKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQ 635
Query: 901 FALHDVEDEQK 933
FALHDVE EQK
Sbjct: 636 FALHDVETEQK 646
Score = 60.8 bits (146), Expect = 7e-07
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLG-LGTDVFVGNSLVVLY 177
+F +MV +G+ + L++ ++ G IH + KLG D FV SLV Y
Sbjct: 234 LFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFY 293
Query: 178 SKCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFT 357
+ C + F E+V K++V W +++ G + AL F +M+R V P++ +FT
Sbjct: 294 AGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFT 353
Query: 358 GLLSAC 375
L++C
Sbjct: 354 SALNSC 359
>ref|XP_004504222.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cicer arietinum]
Length = 708
Score = 367 bits (941), Expect = 5e-99
Identities = 175/311 (56%), Positives = 229/311 (73%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VFG+M+R G+ PN+SSFTSALNSC + +++G+ IHG AVK+GL V+VGNSLVV+YS
Sbjct: 323 VFGDMIRFGVVPNESSFTSALNSCVGLGDLEKGRVIHGVAVKMGLENGVYVGNSLVVMYS 382
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
KCG I D + FK I KN+VSWNS+IVGCAQHGC WAL F +M+R GV D+IT TG
Sbjct: 383 KCGFIGDALYVFKGIGEKNVVSWNSVIVGCAQHGCGVWALALFKEMLREGVESDEITLTG 442
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACS +GM +K R F Y + ++ + +EHY CM+D+L R GE+EEAE L +MPV
Sbjct: 443 LLSACSRAGMLQKARCFFGYFGRKRSMKLTIEHYVCMMDVLGRCGEVEEAEALAMSMPVE 502
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WL LL+ CR SN+++AER AK+IF ++P CS A VLLSN+YA +WS+VA++R
Sbjct: 503 ANSMVWLVLLSACRVHSNLDVAERAAKRIFEMEPDCSPAYVLLSNLYASLRRWSEVAKIR 562
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
++MK +G +KQ G SW+T KG++H F+SGDRSHPLT+ IY G+VPDQ+
Sbjct: 563 SKMKHNGVVKQPGSSWITLKGLRHEFLSGDRSHPLTEKIYEKLDWLGVKLKEMGYVPDQQ 622
Query: 901 FALHDVEDEQK 933
FALHDVE EQ+
Sbjct: 623 FALHDVEIEQQ 633
Score = 65.5 bits (158), Expect = 3e-08
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +1
Query: 37 NQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGL--GTDVFVGNSLVVLYSKCGNICDGIA 210
+ ++ S L++ ++ G IH K G D +V SLV Y+ C +
Sbjct: 232 SSTTLVSGLSAAAKISDFYVGVQIHCCMFKFGYCCSLDEYVSASLVTFYASCKKMESTCK 291
Query: 211 TFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTGLLSACSHSGM 390
F EIV KN+V W +++ G + AL F MIR GV P++ +FT L++C G
Sbjct: 292 VFGEIVCKNVVVWTALLTGFGLNDRHVEALEVFGDMIRFGVVPNESSFTSALNSCVGLGD 351
Query: 391 SRKGR 405
KGR
Sbjct: 352 LEKGR 356
>gb|ESW31536.1| hypothetical protein PHAVU_002G246300g [Phaseolus vulgaris]
Length = 708
Score = 358 bits (918), Expect = 2e-96
Identities = 171/311 (54%), Positives = 227/311 (72%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF M+R G+ PN+SSFTSALNSCC +E +++GK IH VK+GL + +VG SLVV+YS
Sbjct: 323 VFREMMRIGVIPNESSFTSALNSCCGLEDLERGKVIHAEVVKMGLESGGYVGGSLVVMYS 382
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
KCG + + ++ FK I K++VSWN++IVGCAQHGC W L F+QM+R V PD IT TG
Sbjct: 383 KCGYVSEAVSVFKGINEKSVVSWNTVIVGCAQHGCGMWVLALFNQMLRQRVDPDGITLTG 442
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACS SGM +K R F Y + ++ +EHYA M+D+L RSGELEEAE LV +MP++
Sbjct: 443 LLSACSRSGMLQKARCIFRYFGQERSVTLTVEHYASMVDVLGRSGELEEAEALVMSMPMK 502
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WLALL+ C K SN+ +AER A +IF ++P CS+A VL+SN++A + +W++VA +R
Sbjct: 503 ANSMVWLALLSACTKHSNLAVAERAANRIFEMEPDCSAAYVLMSNLFASSSRWAEVALIR 562
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK++G +KQ G SW+T KG KH F+S DRSHPLT+ IY SG+VPDQ+
Sbjct: 563 KKMKRNGVVKQPGSSWLTLKGQKHKFLSADRSHPLTEKIYQKLEWLGMKLKESGYVPDQQ 622
Query: 901 FALHDVEDEQK 933
FALHDVE EQK
Sbjct: 623 FALHDVETEQK 633
Score = 75.1 bits (183), Expect = 4e-11
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLG-LGTDVFVGNSLVVLY 177
VF +MV +G+ P+ L++ ++ G IH +A KLG D FV SLV Y
Sbjct: 221 VFRDMVASGVCPSSVGLVCGLSAAAKILAFHVGIQIHCSAFKLGDWRFDEFVSASLVTFY 280
Query: 178 SKCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFT 357
S C + F E V KN+V W +++ GC + AL F +M+R GV P++ +FT
Sbjct: 281 SCCKQMEAACWVFGEAVCKNVVVWTALLTGCGFNDKHLEALEVFREMMRIGVIPNESSFT 340
Query: 358 GLLSACS-----------HSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELE 504
L++C H+ + + G ++ Y+ S ++ + + G +
Sbjct: 341 SALNSCCGLEDLERGKVIHAEVVKMGLESGGYVGGS------------LVVMYSKCGYVS 388
Query: 505 EAENLVKNMPVRANMSMWLALLNGC 579
EA ++ K + ++ +S W ++ GC
Sbjct: 389 EAVSVFKGINEKSVVS-WNTVIVGC 412
>ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 727
Score = 358 bits (918), Expect = 2e-96
Identities = 170/310 (54%), Positives = 224/310 (72%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF M+R + PN+SSFTSALNSC +E +++G+ IH A +K+GL V+ GNSLVV+YS
Sbjct: 342 VFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYS 401
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
KCG I D + FK I KN+VSWNS+IVGCAQHGC WAL F +M+R GV D+IT TG
Sbjct: 402 KCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTG 461
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACS SGM +K R F Y + ++ + +EHYACM+D+L R GE+EEAE L +MPV
Sbjct: 462 LLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVE 521
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WL LL+ CR S++++AER AK+IF ++P CS+A VLLSN+YA + +W +VAR+R
Sbjct: 522 ANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIR 581
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK +G +KQ G SW+T KG++H F+S DRSHPLT+ IY G++PDQ+
Sbjct: 582 MKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQ 641
Query: 901 FALHDVEDEQ 930
FALHDVE EQ
Sbjct: 642 FALHDVEIEQ 651
Score = 71.6 bits (174), Expect = 4e-10
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Frame = +1
Query: 4 FGNMVR-NGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGL--GTDVFVGNSLVVL 174
F NMV +G+ + ++ L++ ++ G IH K G G D FV SLV
Sbjct: 239 FKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTF 298
Query: 175 YSKCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITF 354
Y+ C + D F E V KN+V W +++ GC + AL FS+M+R V P++ +F
Sbjct: 299 YASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSF 358
Query: 355 TGLLSACSHSGMSRKGR 405
T L++C KGR
Sbjct: 359 TSALNSCVGLEDLEKGR 375
>ref|XP_006449607.1| hypothetical protein CICLE_v10018369mg [Citrus clementina]
gi|557552218|gb|ESR62847.1| hypothetical protein
CICLE_v10018369mg [Citrus clementina]
Length = 652
Score = 357 bits (917), Expect = 3e-96
Identities = 175/311 (56%), Positives = 222/311 (71%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF +M+ G+ PNQS+F S LNSC ++E ID GK IH A+KLGL DVFVGNSLVV+YS
Sbjct: 289 VFSDMINLGVLPNQSTFVSVLNSCIKLEAIDHGKEIHTVAIKLGLVNDVFVGNSLVVMYS 348
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
+CGN+ D A F++I KNIVSWNS+IVG PD+ITFTG
Sbjct: 349 ECGNVIDAAAIFRKIDEKNIVSWNSMIVG----------------------NPDEITFTG 386
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACSHSGM +KGR FEY+ + K E KL+H+ACM+D+L R G+LEEAE L+KNMP++
Sbjct: 387 LLSACSHSGMLQKGRYFFEYISRYKPNEVKLQHFACMVDILGRGGKLEEAEELIKNMPLK 446
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WLALL+ CR SN E+AER AK+I L+PHCS+A VLLSN+YA AG+WSDV+R+R
Sbjct: 447 ANSMVWLALLSSCRMHSNAEVAERAAKEILDLEPHCSAAYVLLSNLYASAGRWSDVSRLR 506
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK+ G +KQ GCSWV KG +H F+SGDRSHPL++ IY G+ P++
Sbjct: 507 VKMKQGGIVKQPGCSWVYLKGTRHEFLSGDRSHPLSEKIYERLDWLGGKLKEFGYCPERS 566
Query: 901 FALHDVEDEQK 933
++LHDVEDEQK
Sbjct: 567 YSLHDVEDEQK 577
Score = 81.6 bits (200), Expect = 4e-13
Identities = 43/125 (34%), Positives = 64/125 (51%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF MV GI P ++ L C + + G IHG +K+G +D F+ SL+ Y+
Sbjct: 188 VFKKMVGYGILPTATTLACVLAGCANVLDLYLGLQIHGCVIKIGFSSDEFICASLITFYA 247
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C I D F E + +N+V W +++ G +G AL FS MI GV P+ TF
Sbjct: 248 NCKLIEDTSKVFNEKLHENVVVWTALLTGNGLNGKHETALKVFSDMINLGVLPNQSTFVS 307
Query: 361 LLSAC 375
+L++C
Sbjct: 308 VLNSC 312
>gb|EMJ15803.1| hypothetical protein PRUPE_ppa003001mg [Prunus persica]
Length = 613
Score = 352 bits (904), Expect = 9e-95
Identities = 176/311 (56%), Positives = 219/311 (70%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF +M++ G+ PNQSSFTSALNSCC +E +D+GK IH A+K+G DVFVGNSL+VL++
Sbjct: 323 VFRDMMKLGVLPNQSSFTSALNSCCGLEDLDRGKEIHTTAIKIGFENDVFVGNSLIVLHT 382
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
KCGNI DG+A FK I KNIVSWNS IVGCAQHGC WALT F+QMIR GV PD+ITFTG
Sbjct: 383 KCGNINDGVAIFKRIGDKNIVSWNSTIVGCAQHGCGMWALTLFNQMIRTGVNPDEITFTG 442
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACSHSGM +K R+ F++ + K E KLEHYACM+D+L R G+LEEAE L+KNMPV+
Sbjct: 443 LLSACSHSGMLQKARRFFKFFSQHKCVEVKLEHYACMVDVLGRCGKLEEAEELIKNMPVQ 502
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WL LL+ C+ SN+++AER AK I L+P CS A V+LSN+YA A +WSDVAR+R
Sbjct: 503 ANKMVWLTLLSACQMHSNLDVAERAAKSIDDLEPDCSDAFVMLSNLYASANRWSDVARIR 562
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK SG ++Q G SW Q+ + +VPDQ+
Sbjct: 563 EKMKHSGTVRQPGSSWENQRNLV-------------------------------YVPDQQ 591
Query: 901 FALHDVEDEQK 933
FA DVE EQK
Sbjct: 592 FAFQDVEAEQK 602
Score = 82.0 bits (201), Expect = 3e-13
Identities = 42/125 (33%), Positives = 68/125 (54%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
+F M+ +G+ P ++F S + +C + + G IHG VKLG D FV SL+ LY+
Sbjct: 222 LFWEMMGSGVQPTLTTFVSVVIACANLLRLHLGVQIHGQIVKLGYCFDEFVAASLITLYA 281
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C + + FKE + KN+V W +++ G + AL F M++ GV P+ +FT
Sbjct: 282 NCKQMENSYKVFKESLHKNVVVWTALLTGYGLNCEHEEALKVFRDMMKLGVLPNQSSFTS 341
Query: 361 LLSAC 375
L++C
Sbjct: 342 ALNSC 346
Score = 59.7 bits (143), Expect = 2e-06
Identities = 47/165 (28%), Positives = 77/165 (46%)
Frame = +1
Query: 142 DVFVGNSLVVLYSKCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMI 321
DV V NS+V Y G + D FK + KN++SW S+I G Q+G + AL F +M+
Sbjct: 168 DVAVWNSMVHGYFSNGRVEDAKNLFKLMPCKNVISWTSMIAGLDQNGRTDEALLLFWEMM 227
Query: 322 RAGVYPDDITFTGLLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGEL 501
+GV P TF ++ AC++ G + + K + A ++ L ++
Sbjct: 228 GSGVQPTLTTFVSVVIACANLLRLHLGVQIHGQIVKLGYCFDEFV-AASLITLYANCKQM 286
Query: 502 EEAENLVKNMPVRANMSMWLALLNGCRKQSNIELAERVAKQIFYL 636
E + + K + N+ +W ALL G E A +V + + L
Sbjct: 287 ENSYKVFKE-SLHKNVVVWTALLTGYGLNCEHEEALKVFRDMMKL 330
>ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 352 bits (903), Expect = 1e-94
Identities = 172/311 (55%), Positives = 220/311 (70%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF M+R + PNQSS TSALNSCC +E +D+G+ +H A KLGL +D+FV NSLVV+Y+
Sbjct: 327 VFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYT 386
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
KCG+I DGIA F + KN+VSWNSIIVGCAQHG WALT F+QMIR V PD+IT G
Sbjct: 387 KCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAG 446
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSAC HSGM KGR F++ K+ E EHY+ M+DLL R G+LEEAE L+ MP +
Sbjct: 447 LLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGK 506
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
AN +WLALL+ SN+ +AER AK + L P+CS+A LLSN+YA GKW++V+++R
Sbjct: 507 ANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIR 566
Query: 721 AQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQR 900
+MK G +KQ G SW+T KG+KH F+SGD+SHPL++ IY G+VPD +
Sbjct: 567 KKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPK 626
Query: 901 FALHDVEDEQK 933
F+ HDVE EQK
Sbjct: 627 FSFHDVETEQK 637
Score = 62.0 bits (149), Expect = 3e-07
Identities = 43/179 (24%), Positives = 81/179 (45%)
Frame = +1
Query: 43 SSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYSKCGNICDGIATFKE 222
S+ AL +C + G IHG VK G + ++ SL+ Y+ C I + + F +
Sbjct: 240 STLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFND 299
Query: 223 IVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTGLLSACSHSGMSRKG 402
V++N+V W +++ G + AL F M+R V P+ + T L++C +G
Sbjct: 300 NVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRG 359
Query: 403 RKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVRANMSMWLALLNGC 579
R+ K E+ + ++ + + G + + + M R N+ W +++ GC
Sbjct: 360 REVHAVAHK-LGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMS-RKNVVSWNSIIVGC 416
>ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297311026|gb|EFH41450.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 697
Score = 335 bits (860), Expect = 1e-89
Identities = 172/312 (55%), Positives = 212/312 (67%), Gaps = 1/312 (0%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF M+RN I PNQS+F S LNSC + +D GK IHG AVKLGLGT FVGNSLVV+YS
Sbjct: 313 VFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYS 372
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
GN+ D ++ F EI K+IVSWNSIIVGCAQHG WA F QMIR PD+ITFTG
Sbjct: 373 DSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTG 432
Query: 361 LLSACSHSGMSRKGRKTFEYLRKS-KTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPV 537
LLSACSH G +KGRK F Y+ + K++HY CM+D+L R GEL+EAE L+++M V
Sbjct: 433 LLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVV 492
Query: 538 RANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARV 717
+ N +WLALL+ CR S+++ E+ A IF LD S+A VLLSNIYA AG+WS V+++
Sbjct: 493 KPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVSKL 552
Query: 718 RAQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQ 897
R +MK+ G +K+ G SWV +G KH F SGDR H L I+ G+VPD
Sbjct: 553 RVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHCL--RIFEKLEFLREKLKELGYVPDY 610
Query: 898 RFALHDVEDEQK 933
R ALHDVEDEQK
Sbjct: 611 RSALHDVEDEQK 622
Score = 72.8 bits (177), Expect = 2e-10
Identities = 40/136 (29%), Positives = 66/136 (48%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
+F NM+R I +FT + +C G +HG +K G + +V SL+ LY+
Sbjct: 212 LFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYA 271
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C D F E+V + + W +++ G + + AL FS+MIR + P+ TF
Sbjct: 272 NCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFAS 331
Query: 361 LLSACSHSGMSRKGRK 408
L++CS G G++
Sbjct: 332 GLNSCSALGTLDWGKE 347
Score = 68.9 bits (167), Expect = 3e-09
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Frame = +1
Query: 46 SFTSALNSCCEMEIIDQGKGIH-GAAVKLGLGTDVFVGNSLVVLYSKCGNICDGIATFKE 222
S+T+ +N C ++DQ + + VK D+ N++V Y + G + D + FK+
Sbjct: 130 SWTAMVNGCFRFGMVDQAERLFCQMPVK-----DIAAWNAMVHGYLQFGKVDDALKLFKQ 184
Query: 223 IVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTGLLSACSHSGMSRKG 402
+ KN++SW ++I G Q+ AL F M+R + TFT +++AC+++ G
Sbjct: 185 MPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMG 244
Query: 403 RKTFEYLRKSKTTEAKLEHY--ACMLDLLCRSGELEEAENLVKNMPVRANMSMWLALLNG 576
+ ++ KS E Y A ++ L E++ + M V +++W ALL+G
Sbjct: 245 TQVHGFIIKSGFL---YEEYVTASLITLYANCKRTEDSRKVFGEM-VHEKVAVWTALLSG 300
>ref|XP_006398338.1| hypothetical protein EUTSA_v10000805mg [Eutrema salsugineum]
gi|557099427|gb|ESQ39791.1| hypothetical protein
EUTSA_v10000805mg [Eutrema salsugineum]
Length = 696
Score = 335 bits (858), Expect = 2e-89
Identities = 169/312 (54%), Positives = 215/312 (68%), Gaps = 1/312 (0%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF M+RN I PNQS+F S LNSC + +D GK +HG AVKL LGTD FVGNSLVV+YS
Sbjct: 312 VFSEMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLILGTDAFVGNSLVVMYS 371
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
CGN+ D + F EI+ K+ VSWNSIIVGCAQHG WA F QMIR P++IT TG
Sbjct: 372 DCGNVKDAVLVFTEILKKSTVSWNSIIVGCAQHGRGKWAFIIFGQMIRLNKEPNEITLTG 431
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKT-TEAKLEHYACMLDLLCRSGELEEAENLVKNMPV 537
LLSACSH G +KGRK F+Y+ + K++HY CM+D+L R GEL+EAE+L+++M V
Sbjct: 432 LLSACSHCGFLQKGRKLFDYMSTGPNHIDRKIQHYTCMIDILGRCGELKEAEDLIESMHV 491
Query: 538 RANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARV 717
+ N +WLALL+ CR S+++ AE+ A IF LD S+A VLLSNIYA AG+WS+V+++
Sbjct: 492 KPNEMVWLALLSACRMHSDVDRAEKAAAAIFKLDSKSSAAYVLLSNIYASAGRWSNVSKL 551
Query: 718 RAQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQ 897
R +MK+ G +K+ G SWV +G KH F SGDR P + +Y G+VPD
Sbjct: 552 RVKMKQKGIMKKPGSSWVVLRGKKHEFFSGDR--PDSLRVYEKLEFLRDKLKELGYVPDY 609
Query: 898 RFALHDVEDEQK 933
R ALHDVEDEQK
Sbjct: 610 RSALHDVEDEQK 621
Score = 68.6 bits (166), Expect = 3e-09
Identities = 37/136 (27%), Positives = 63/136 (46%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
+F NM+ I +F + +C G +HG +K G D +V SL+ Y+
Sbjct: 211 LFKNMLSCCIKSTSRTFACVITACANAPAFQMGTQVHGFTIKSGYLYDEYVSASLITFYA 270
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C D F E V + + W +++ G + + AL+ FS+M+R + P+ TF
Sbjct: 271 NCKRTEDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEVALSVFSEMLRNSILPNQSTFAS 330
Query: 361 LLSACSHSGMSRKGRK 408
L++CS G G++
Sbjct: 331 GLNSCSALGTLDWGKE 346
Score = 60.8 bits (146), Expect = 7e-07
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 1/195 (0%)
Frame = +1
Query: 46 SFTSALNSCCEMEIIDQGKGI-HGAAVKLGLGTDVFVGNSLVVLYSKCGNICDGIATFKE 222
S+T+ +N C IDQ + + + VK D N++V Y + G + D + F++
Sbjct: 129 SWTAMVNGCLRSGKIDQAESLFYQMPVK-----DTAAWNAMVHGYLQFGKVDDALKLFRQ 183
Query: 223 IVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTGLLSACSHSGMSRKG 402
+ KN++SW ++I G Q+ AL F M+ + TF +++AC+++ + G
Sbjct: 184 MPRKNVISWTTMICGLDQNERSGEALLLFKNMLSCCIKSTSRTFACVITACANAPAFQMG 243
Query: 403 RKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVRANMSMWLALLNGCR 582
+ + KS E+ + L + + E V + V +++W ALL+G
Sbjct: 244 TQVHGFTIKSGYLYD--EYVSASLITFYANCKRTEDSRKVFDEKVHEQVAVWTALLSGYS 301
Query: 583 KQSNIELAERVAKQI 627
E+A V ++
Sbjct: 302 LNKKHEVALSVFSEM 316
>ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product
[Arabidopsis thaliana] gi|332008005|gb|AED95388.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 697
Score = 330 bits (845), Expect = 6e-88
Identities = 167/312 (53%), Positives = 210/312 (67%), Gaps = 1/312 (0%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
+F M+RN I PNQS+F S LNSC + +D GK +HG AVKLGL TD FVGNSLVV+YS
Sbjct: 313 IFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYS 372
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
GN+ D ++ F +I K+IVSWNSIIVGCAQHG WA F QMIR PD+ITFTG
Sbjct: 373 DSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTG 432
Query: 361 LLSACSHSGMSRKGRKTFEYLRKS-KTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPV 537
LLSACSH G KGRK F Y+ + K++HY CM+D+L R G+L+EAE L++ M V
Sbjct: 433 LLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVV 492
Query: 538 RANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARV 717
+ N +WLALL+ CR S+++ E+ A IF LD S+A VLLSNIYA AG+WS+V+++
Sbjct: 493 KPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKL 552
Query: 718 RAQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQ 897
R +MKK+G +K+ G SWV +G KH F SGD+ H IY G+ PD
Sbjct: 553 RVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYEKLEFLREKLKELGYAPDY 610
Query: 898 RFALHDVEDEQK 933
R ALHDVEDEQK
Sbjct: 611 RSALHDVEDEQK 622
Score = 72.8 bits (177), Expect = 2e-10
Identities = 40/136 (29%), Positives = 65/136 (47%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
+F NM+R I FT + +C G +HG +KLG + +V SL+ Y+
Sbjct: 212 LFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYA 271
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C I D F E V + + W +++ G + + AL+ FS M+R + P+ TF
Sbjct: 272 NCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFAS 331
Query: 361 LLSACSHSGMSRKGRK 408
L++CS G G++
Sbjct: 332 GLNSCSALGTLDWGKE 347
Score = 59.7 bits (143), Expect = 2e-06
Identities = 37/138 (26%), Positives = 70/138 (50%)
Frame = +1
Query: 163 LVVLYSKCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPD 342
++ Y++ + D + F E+ +++VSWNS+I GC + G N A+ F +M V
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV--- 128
Query: 343 DITFTGLLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLV 522
+++T +++ C SG + + F Y K T A + M+ + G++++A L
Sbjct: 129 -VSWTAMVNGCFRSGKVDQAERLF-YQMPVKDTAA----WNSMVHGYLQFGKVDDALKLF 182
Query: 523 KNMPVRANMSMWLALLNG 576
K MP + N+ W ++ G
Sbjct: 183 KQMPGK-NVISWTTMICG 199
>ref|XP_006282004.1| hypothetical protein CARUB_v10028231mg [Capsella rubella]
gi|482550708|gb|EOA14902.1| hypothetical protein
CARUB_v10028231mg [Capsella rubella]
Length = 696
Score = 328 bits (841), Expect = 2e-87
Identities = 164/312 (52%), Positives = 213/312 (68%), Gaps = 1/312 (0%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF M +N I PNQS+F S LNSC + +D GK +HG AVKLGLG D FVGNSL V+YS
Sbjct: 312 VFSGMFKNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLGADAFVGNSLAVMYS 371
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
CGN+ D ++ F EI KNIVSWNSIIVGCAQHG WA F QMIR PD+ITFTG
Sbjct: 372 DCGNVNDAVSVFTEISKKNIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKDPDEITFTG 431
Query: 361 LLSACSHSGMSRKGRKTFEYLRKS-KTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPV 537
LLSACSH G +KGRK F Y+ + K++HY CM+D+L RSG+L+EAE L+++M V
Sbjct: 432 LLSACSHCGFLQKGRKLFYYMSSGLNYIDRKIQHYTCMVDILGRSGKLKEAEELIESMVV 491
Query: 538 RANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARV 717
+ N +WLALL+ CR S+++ E+ A IF ++ + S+A +LLSNIYA AG+WS+V+++
Sbjct: 492 KPNELVWLALLSACRMHSDVDRGEKAAAAIFNMELNSSAAYILLSNIYASAGRWSNVSKL 551
Query: 718 RAQMKKSGAIKQRGCSWVTQKGVKHAFVSGDRSHPLTKSIYXXXXXXXXXXXXSGHVPDQ 897
R +MK+ G +K+ G SWV +G KH F SGD+ H + IY G+V D
Sbjct: 552 RVKMKQKGIMKKPGSSWVVLRGKKHEFFSGDQPHCV--RIYEKLEFLKEKLKGLGYVTDY 609
Query: 898 RFALHDVEDEQK 933
R ALHDV++EQK
Sbjct: 610 RSALHDVDNEQK 621
Score = 67.0 bits (162), Expect = 1e-08
Identities = 36/136 (26%), Positives = 63/136 (46%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
+F NM+R I +FT + +C G +HG +K G + +V SL+ Y+
Sbjct: 211 LFKNMLRCCIKSTSRTFTCVITACANAPAFHMGIQVHGFIIKSGFFYEEYVSASLITFYA 270
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C D F E + + + W +++ G + + AL+ FS M + + P+ TF
Sbjct: 271 NCQRTDDSRKVFDEKIREQVAVWTALLSGYSLNKKHEDALSVFSGMFKNSILPNQSTFAS 330
Query: 361 LLSACSHSGMSRKGRK 408
L++CS G G++
Sbjct: 331 GLNSCSALGTLDWGKE 346
Score = 62.0 bits (149), Expect = 3e-07
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Frame = +1
Query: 46 SFTSALNSCCEMEIIDQGKGIHGAA-VKLGLGTDVFVGNSLVVLYSKCGNICDGIATFKE 222
S+T+ + C + +DQ + + VK D N++V Y + G + D + FK+
Sbjct: 129 SWTAMVTGCFKSGKVDQAERLFSQMPVK-----DTTAWNTMVHGYLQFGKVDDALKLFKQ 183
Query: 223 IVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTGLLSACSHSGMSRKG 402
+ KN++SW ++I G Q+ AL F M+R + TFT +++AC+++ G
Sbjct: 184 MPRKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRTFTCVITACANAPAFHMG 243
Query: 403 RKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVRANMSMWLALLNG 576
+ ++ KS E+ + L + + + V + +R +++W ALL+G
Sbjct: 244 IQVHGFIIKSGFFYE--EYVSASLITFYANCQRTDDSRKVFDEKIREQVAVWTALLSG 299
Score = 59.7 bits (143), Expect = 2e-06
Identities = 35/138 (25%), Positives = 69/138 (50%)
Frame = +1
Query: 163 LVVLYSKCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPD 342
++ Y++ + D + F E+ +++VSWNS+I GC + G + A+ F +M V
Sbjct: 71 MITGYTRNNRLVDALDMFDEMPVRDVVSWNSMISGCVECGDIDTAVRLFDEMPERSV--- 127
Query: 343 DITFTGLLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLV 522
+++T +++ C SG + + F + TT + M+ + G++++A L
Sbjct: 128 -VSWTAMVTGCFKSGKVDQAERLFSQMPVKDTTA-----WNTMVHGYLQFGKVDDALKLF 181
Query: 523 KNMPVRANMSMWLALLNG 576
K MP R N+ W ++ G
Sbjct: 182 KQMP-RKNVISWTTMICG 198
>ref|XP_004301528.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 577
Score = 322 bits (824), Expect = 2e-85
Identities = 155/258 (60%), Positives = 193/258 (74%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VF +M+ +G+ PNQSSFTSALNSC +E + +GK IH AVKLG TD FVGNSL+VLY+
Sbjct: 320 VFRDMMISGVLPNQSSFTSALNSCLGLEHLHRGKEIHATAVKLGFETDAFVGNSLIVLYT 379
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
KCGN+ DG+A FK I KN+VSWNS I+GCAQHG WAL F+QM+RA V PD+IT TG
Sbjct: 380 KCGNVNDGVAVFKRIGEKNVVSWNSTIIGCAQHGRGKWALALFNQMLRADVGPDEITLTG 439
Query: 361 LLSACSHSGMSRKGRKTFEYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPVR 540
LLSACSHSGM +K R F+ L ++K E K EH+ CM+D+L R GELEEAE ++NMPV+
Sbjct: 440 LLSACSHSGMLQKARGFFKVLSQTKYIEMKKEHFTCMVDVLGRFGELEEAEEFIRNMPVQ 499
Query: 541 ANMSMWLALLNGCRKQSNIELAERVAKQIFYLDPHCSSAPVLLSNIYAFAGKWSDVARVR 720
WL LL CR SN+++AER AK IF ++P+CS+A VLLSNIYA A +WSDV+R+R
Sbjct: 500 ETKMAWLTLLGACRLHSNLDVAERAAKNIFDIEPNCSAACVLLSNIYASANRWSDVSRIR 559
Query: 721 AQMKKSGAIKQRGCSWVT 774
+MK G +KQ G SW T
Sbjct: 560 EKMKYGGTVKQPGSSWFT 577
Score = 97.1 bits (240), Expect = 9e-18
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Frame = +1
Query: 1 VFGNMVRNGIPPNQSSFTSALNSCCEMEIIDQGKGIHGAAVKLGLGTDVFVGNSLVVLYS 180
VFG MV +G+ ++F S + +C +D G +HG VKLG DVF+ SL+ LY+
Sbjct: 219 VFGEMVASGVQATLTTFGSVVTACANSGSLDLGVEVHGQIVKLGYCFDVFLAASLITLYA 278
Query: 181 KCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMIRAGVYPDDITFTG 360
C I + FKE V +N+V W ++I GC + + AL F M+ +GV P+ +FT
Sbjct: 279 NCNQIENSHKVFKESVHRNVVVWTALITGCGSNSKHDDALKVFRDMMISGVLPNQSSFTS 338
Query: 361 LLSACSHSGMSRKGRKTF-EYLRKSKTTEAKLEHYACMLDLLCRSGELEEAENLVKNMPV 537
L++C +G++ ++ T+A + + +L C G + + + K +
Sbjct: 339 ALNSCLGLEHLHRGKEIHATAVKLGFETDAFVGNSLIVLYTKC--GNVNDGVAVFKRIGE 396
Query: 538 RANMSMWLALLNGCRKQSNIELAERVAKQIFYLD 639
+ N+ W + + GC + + A + Q+ D
Sbjct: 397 K-NVVSWNSTIIGCAQHGRGKWALALFNQMLRAD 429
Score = 64.3 bits (155), Expect = 6e-08
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Frame = +1
Query: 142 DVFVGNSLVVLYSKCGNICDGIATFKEIVAKNIVSWNSIIVGCAQHGCCNWALTFFSQMI 321
DV NS++ G + D F+ + KN +SW S+I G Q+G AL F +M+
Sbjct: 165 DVAAWNSMIHGCFSYGRVDDANKLFEVMPGKNAISWTSMIAGLDQNGRSEEALVVFGEMV 224
Query: 322 RAGVYPDDITFTGLLSACSHSGMSRKGRKTF-EYLRKSKTTEAKLEHYACMLDLLCRSGE 498
+GV TF +++AC++SG G + + ++ + L A ++ L +
Sbjct: 225 ASGVQATLTTFGSVVTACANSGSLDLGVEVHGQIVKLGYCFDVFLA--ASLITLYANCNQ 282
Query: 499 LEEAENLVKNMPVRANMSMWLALLNGCRKQSNIELAERVAKQI 627
+E + + K V N+ +W AL+ GC S + A +V + +
Sbjct: 283 IENSHKVFKE-SVHRNVVVWTALITGCGSNSKHDDALKVFRDM 324