BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00013202
         (4023 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1975   0.0  
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s...  1971   0.0  
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1947   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1919   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1919   0.0  
gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...  1915   0.0  
gb|EOY19611.1| DNA-directed RNA polymerase isoform 3 [Theobroma ...  1901   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1875   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1858   0.0  
ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III s...  1849   0.0  
ref|XP_004249177.1| PREDICTED: DNA-directed RNA polymerase III s...  1833   0.0  
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s...  1812   0.0  
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...  1810   0.0  
ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutr...  1806   0.0  
ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Caps...  1796   0.0  
ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis t...  1793   0.0  
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s...  1789   0.0  
gb|EPS66119.1| hypothetical protein M569_08657, partial [Genlise...  1789   0.0  
gb|EOY19615.1| DNA-directed RNA polymerase isoform 7 [Theobroma ...  1782   0.0  
gb|ESW24958.1| hypothetical protein PHAVU_004G175000g [Phaseolus...  1774   0.0  

>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1975 bits (5117), Expect = 0.0
 Identities = 984/1149 (85%), Positives = 1052/1149 (91%), Gaps = 5/1149 (0%)
 Frame = -1

Query: 3717 TVQEGNNDTNELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKK 3538
            T+     D+N+ GIDK  LA+PIK+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV TEIKK
Sbjct: 6    TMSNTTEDSNQ-GIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIKK 64

Query: 3537 IVFANEWIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIE 3358
            IV AN+ IRS +D  +YLRY DV IGEPSM+ D VTEKL P KCRLSD TYAAPI+V IE
Sbjct: 65   IVRANQEIRSILDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTIE 124

Query: 3357 YR-GQSQSTETLKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGT 3181
            Y  G    T    KK+VIIGRMPIMLRS  CVLY KDE+ELA LGECPLDPGGYF+IKGT
Sbjct: 125  YTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGT 184

Query: 3180 EKVILIQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKV 3001
            EKVILIQEQLSKNRIIID DKKG VQASVTSST  TKSKT+IKMEKEK+YL LN FK+KV
Sbjct: 185  EKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTKV 244

Query: 3000 PIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLE--KQVK 2827
            PIMVVMKAMGMESDQEVVQMIGRDPR+SALLLPSIEECA   +YTQ QAL++LE  K +K
Sbjct: 245  PIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLESDKMLK 304

Query: 2826 QLPYPSAPVEK--RALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDD 2653
               Y + PVEK  RALSIL DIF+AN+PV Q NFR KCIYVAVM+RRMMEA+LNKDAMDD
Sbjct: 305  MPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDD 364

Query: 2652 KDYVGNKRLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDSIT 2473
            KDYVGNKRLELSGQ+LSLLFEDLFKTMNDE R+TID +L +PSRSSR DISQYIVKDSIT
Sbjct: 365  KDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSIT 424

Query: 2472 VGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQ 2293
            +GLER+LSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSGPRALQ
Sbjct: 425  MGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQ 484

Query: 2292 PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELH 2113
            PSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E PI+SLCYCLGVEDLE LS EELH
Sbjct: 485  PSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELH 544

Query: 2112 MPNSFLIILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRV 1933
            MP S+LI LNGLILGKH+ PQRFANAMR+LRRAGKIGEFVSI+VNE QRCVYIASDGGRV
Sbjct: 545  MPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGRV 604

Query: 1932 CRPLVIADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATP 1753
            CRPLVIADKGVSRIKEHHM+EL+DGVR+FDSFL++GLIEYLDVNEENN LIALYE EATP
Sbjct: 605  CRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEKEATP 664

Query: 1752 ETTHIEIEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLL 1573
            ETTHIEIEP TILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD L+YLL
Sbjct: 665  ETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLL 724

Query: 1572 VYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM 1393
            VYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM
Sbjct: 725  VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM 784

Query: 1392 KKMSAISQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKV 1213
            KK SAI QKYENGTSDRII+PQRQG++A++MQILDDDG+AAPGE IR HDIYINKESP V
Sbjct: 785  KKYSAICQKYENGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINKESPTV 844

Query: 1212 IRGPVTSPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEV 1033
             R P+TSP GL DS YK S+QTYKGPEGETAVVDRVAL SD+NNNL IK+MIRHTRRPE+
Sbjct: 845  TRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPEI 904

Query: 1032 GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV 853
            GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV
Sbjct: 905  GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV 964

Query: 852  SSGRFHYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIY 673
            S GRFHYGSAFGEPSGHADTV++ISETLV HGFSYNGKDF+YSGITGMPLQAYI+MGPIY
Sbjct: 965  SCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIY 1024

Query: 672  YQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERL 493
            YQKLKHMVLDKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERL
Sbjct: 1025 YQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERL 1084

Query: 492  MISSDPFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNI 313
            MISSDPFEVQVCRKCGLLGYYNYKLK GICS CKNG+NISTMKLPYACKLL QELQSMNI
Sbjct: 1085 MISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNI 1144

Query: 312  VPRLKLTAA 286
            VPRLKL  A
Sbjct: 1145 VPRLKLAEA 1153


>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            lycopersicum]
          Length = 1183

 Score = 1971 bits (5105), Expect = 0.0
 Identities = 982/1149 (85%), Positives = 1051/1149 (91%), Gaps = 5/1149 (0%)
 Frame = -1

Query: 3717 TVQEGNNDTNELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKK 3538
            T+     D+N+ GIDK  LA+ IK+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV TEIKK
Sbjct: 36   TMSNTTEDSNQ-GIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIKK 94

Query: 3537 IVFANEWIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIE 3358
            IV AN+ IRS +D  +YLRY DV IGEPSM+ D VTEKL P KCRLSD TYAAPI+V I+
Sbjct: 95   IVRANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTID 154

Query: 3357 YR-GQSQSTETLKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGT 3181
            Y  G    T    KK+VIIGRMPIMLRS  CVLY KDE+ELA LGECPLDPGGYF+IKGT
Sbjct: 155  YTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGT 214

Query: 3180 EKVILIQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKV 3001
            EKVILIQEQLSKNRIIID DKKG VQASVTSST  TKSKT+IKMEKEK+YL LN FK+KV
Sbjct: 215  EKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTKV 274

Query: 3000 PIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLE--KQVK 2827
            PIMVVMKAMGMESDQEVVQMIGRDPR+SALLLPSIEECA   +YTQQQAL++LE  K +K
Sbjct: 275  PIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLESDKMLK 334

Query: 2826 QLPYPSAPVEK--RALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDD 2653
               Y + P+EK  RALSIL DIF+AN+PV Q NFR KCIYVAVM+RRMMEA+LNKDAMDD
Sbjct: 335  MPSYSTGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDD 394

Query: 2652 KDYVGNKRLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDSIT 2473
            KDYVGNKRLELSGQ+LSLLFEDLFKTMNDE R+TID +L +PSRSSR DISQYI+KDSIT
Sbjct: 395  KDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIKDSIT 454

Query: 2472 VGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQ 2293
            +GLER+LSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSGPRALQ
Sbjct: 455  MGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQ 514

Query: 2292 PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELH 2113
            PSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E PI+SLCYCLGVEDLE LS EELH
Sbjct: 515  PSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELH 574

Query: 2112 MPNSFLIILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRV 1933
            MP S+LI LNGLILGKH+ PQRFANAMR+LRRAGK+GEFVSI+VNE QRCVYIASDGGRV
Sbjct: 575  MPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIASDGGRV 634

Query: 1932 CRPLVIADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATP 1753
            CRPLVIADKGVSRIKEHHM+EL+DG+R+FDSFL++GLIEYLDVNEENN LIALYE EATP
Sbjct: 635  CRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYEKEATP 694

Query: 1752 ETTHIEIEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLL 1573
            ETTHIEIEP TILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD L+YLL
Sbjct: 695  ETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLL 754

Query: 1572 VYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM 1393
            VYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM
Sbjct: 755  VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM 814

Query: 1392 KKMSAISQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKV 1213
            KK SAI QKYENGTSDRII+PQRQG +A+RMQILDDDG+AAPGE IR HDIYINKESP V
Sbjct: 815  KKYSAICQKYENGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINKESPTV 874

Query: 1212 IRGPVTSPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEV 1033
             R PVTSP GL DS YK SKQTYKGPEGETAVVDRVAL SD+NNNL IK+MIRHTRRPE+
Sbjct: 875  TRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPEL 934

Query: 1032 GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV 853
            GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV
Sbjct: 935  GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV 994

Query: 852  SSGRFHYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIY 673
            S GRFHYGSAFGEPSGHADTV+AISETLV HGFSYNGKDF+YSGITGMPLQAYI+MGPIY
Sbjct: 995  SCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIY 1054

Query: 672  YQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERL 493
            YQKLKHMV+DKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERL
Sbjct: 1055 YQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERL 1114

Query: 492  MISSDPFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNI 313
            MISSDPFEVQVCRKCGLLGYYNYKLK GICS CKNG+NISTMKLPYACKLL QELQSMNI
Sbjct: 1115 MISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNI 1174

Query: 312  VPRLKLTAA 286
            VPRLKL  A
Sbjct: 1175 VPRLKLAEA 1183


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1947 bits (5044), Expect = 0.0
 Identities = 957/1139 (84%), Positives = 1044/1139 (91%), Gaps = 6/1139 (0%)
 Frame = -1

Query: 3684 LGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFANEWIRSK 3505
            + I K F A P+K AVDKF LLPEFLKVRGLVKQHLDSFNYFV T+IKKIV AN+ I S 
Sbjct: 4    MSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSS 63

Query: 3504 VDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEYRGQSQSTET- 3328
            VD  +YLR+ DVRIGEPS+ +DG++EKL PH CRLSD TYAAPI VNIEY   S   +T 
Sbjct: 64   VDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTR 123

Query: 3327 LKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVILIQEQLS 3148
            ++K DV+IGRMPIMLRS  CVLYKKDE ELA LGECPLDPGGYF++KGTEKVILIQEQLS
Sbjct: 124  VEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLS 183

Query: 3147 KNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGM 2968
            KNRIIID DKKG + ASVTSST  TKSKTVI MEKEKI+L LNQF SK+PIM+VMKAMGM
Sbjct: 184  KNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGM 243

Query: 2967 ESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPY--PSAPVEK 2794
            ESDQEVVQM+GR+PRYSALLLPS+EECA   +YTQQQAL++LE++VK+LP+  PS   E 
Sbjct: 244  ESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEG 303

Query: 2793 RALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSG 2614
            R ++IL D FIAN+PVRQ NFR KC+YVAVMLRRMM+A+LNKDAMDDKDYVGNKRLELSG
Sbjct: 304  RGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSG 363

Query: 2613 QMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQ---YIVKDSITVGLERSLSTG 2443
            Q++SLLFEDLFKTM  EV+KTIDAIL KPSRSSRFD SQ   +IV+DSITVGLER+LSTG
Sbjct: 364  QLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTG 423

Query: 2442 NWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 2263
            NWDVKRFRMHRKGM+QVVARLSYIG+LGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC
Sbjct: 424  NWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 483

Query: 2262 DTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFLIILN 2083
            DTPEGEACGLVKNLALMTHVTTDEEE P++SLCY LGVEDLELLSGEELH PNSFLII N
Sbjct: 484  DTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFN 543

Query: 2082 GLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVIADKG 1903
            GLILGKHR+PQRFANA+RKLRRAGKIGEFVS++VNE Q CVYIASDGGRVCRP+VIADKG
Sbjct: 544  GLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKG 603

Query: 1902 VSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPETTHIEIEPL 1723
             SRIKEHHMKEL DGVR FD FLR+GLIEYLDVNEENNALIALYE++A PETTHIEIEP 
Sbjct: 604  KSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEPF 663

Query: 1722 TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQRPLLTT 1543
            TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYN+LCRMD+L+YLLVYPQRPLLTT
Sbjct: 664  TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTT 723

Query: 1542 KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAISQKY 1363
            +TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SA++Q+Y
Sbjct: 724  RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRY 783

Query: 1362 ENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIRGPVTSPAG 1183
            EN  SDRI+RP + G+DAERMQILDDDGLAAPGEII+P+DIYINKESP + +GP+ SP G
Sbjct: 784  ENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPVG 843

Query: 1182 LSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGDKFSSRHGQ 1003
            L DS YKPS+QT+KGPEGE +VVDRVALCSDKN+NLCIK++IRHTRRPEVGDKFSSRHGQ
Sbjct: 844  LPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQ 903

Query: 1002 KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSA 823
            KGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSA
Sbjct: 904  KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 963

Query: 822  FGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQKLKHMVLD 643
            FGEPSGHAD VE IS+TLV HGFSY+GKDF+YSGITG PLQAYI+MGPIYYQKLKHMVLD
Sbjct: 964  FGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1023

Query: 642  KMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQ 463
            KMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQ
Sbjct: 1024 KMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQ 1083

Query: 462  VCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLTAA 286
            VCR CGLLGYYN+KLK GICSTCKNGDNISTMKLPYACKLL QELQ+MN+VPRLKLT A
Sbjct: 1084 VCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1142


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1919 bits (4972), Expect = 0.0
 Identities = 939/1133 (82%), Positives = 1036/1133 (91%), Gaps = 3/1133 (0%)
 Frame = -1

Query: 3675 DKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFANEWIRSKVDE 3496
            DK  LAAP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFV+T I+KIV AN+ I S +D 
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76

Query: 3495 RVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEY-RGQSQSTETLKK 3319
             ++LR+ DVRIG+PSM +DGV+EKL PH CRLSD TYAAPI VNIEY +G      T++K
Sbjct: 77   SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEK 136

Query: 3318 KDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVILIQEQLSKNR 3139
             DV+IGR+PIMLRS  CVLY KDE ELA LGECPLDPGGYFIIKGTEKV+LIQEQLSKNR
Sbjct: 137  NDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNR 196

Query: 3138 IIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGMESD 2959
            +IID DKKG + ASVTSST   KSKTVI+MEK K+YL LNQF  K+PIMVVMKAMG+ESD
Sbjct: 197  VIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIESD 256

Query: 2958 QEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPYPSAPVEK--RAL 2785
            QEVVQM+GRDPRYSALLLPSIEECA  ++YTQ++AL+YLE +VK+  + S P ++  RA 
Sbjct: 257  QEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAF 316

Query: 2784 SILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQML 2605
            SIL D+F+AN+PV   NFR KC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQ++
Sbjct: 317  SILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLV 376

Query: 2604 SLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDSITVGLERSLSTGNWDVKR 2425
            SLLFEDLFKTM  EV+KT+D IL KPSRSSRFD+SQ+IV+DSITVGLER+LSTGN+DVKR
Sbjct: 377  SLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKR 436

Query: 2424 FRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 2245
            F+MHRKGMTQV+ARLS+IGTLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE
Sbjct: 437  FKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 496

Query: 2244 ACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFLIILNGLILGK 2065
            ACGLVKNLALMTHVTTDEEEGP++SLCYCLGVEDLELLSGEELH PNSFL+I NGLILGK
Sbjct: 497  ACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGK 556

Query: 2064 HRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVIADKGVSRIKE 1885
            HR+P+ FA+ MRKLRRAGKIGEFVS++VNE QRCVYIASDGGRVCRPLVIADKG+SRIKE
Sbjct: 557  HRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKE 616

Query: 1884 HHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPETTHIEIEPLTILGVC 1705
            HHMKEL DGVR+FD FLREGLIEYLDVNEENNALIALYE +ATP+TTHIEIEP TILGV 
Sbjct: 617  HHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVI 676

Query: 1704 AGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQRPLLTTKTIELV 1525
            AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+N+LCRMD+L+YLLVYPQRPLLTT+TIELV
Sbjct: 677  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELV 736

Query: 1524 GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAISQKYENGTSD 1345
            GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AI+QKY N TSD
Sbjct: 737  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSD 796

Query: 1344 RIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIRGPVTSPAGLSDSDY 1165
            RI+RP R G  AERMQILDDDGLAAPGEII+P+D+YINKESP   RG + SP G +DS Y
Sbjct: 797  RILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRY 856

Query: 1164 KPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGDKFSSRHGQKGVCGT 985
            + ++QTYKGP+GET VVDRVALCSDKN +LCIK++IRHTRRPE+GDKFSSRHGQKGVCGT
Sbjct: 857  RSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGT 916

Query: 984  IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEPSG 805
            IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEPSG
Sbjct: 917  IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG 976

Query: 804  HADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQKLKHMVLDKMHARG 625
            HADTVE+ISETLV HGFSYNGKD +YSGITG PLQAYI+MGPIYYQKLKHMVLDKMHARG
Sbjct: 977  HADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG 1036

Query: 624  SGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCG 445
            SGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR CG
Sbjct: 1037 SGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCG 1096

Query: 444  LLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLTAA 286
            LLGYYN+KLK GICSTCKNGDNIS+MKLPYACKLLIQELQSMNIVPRLKL  A
Sbjct: 1097 LLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1919 bits (4972), Expect = 0.0
 Identities = 943/1148 (82%), Positives = 1042/1148 (90%), Gaps = 3/1148 (0%)
 Frame = -1

Query: 3720 MTVQEGNNDTNELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIK 3541
            M V+E   D  E   DK  LAAP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFV+T I+
Sbjct: 4    MQVEESPKD--EQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIR 61

Query: 3540 KIVFANEWIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNI 3361
            KIV AN+ I S +D  ++LR+ DVRIG+PSM +DGV+EKL PH CRLSD TYAAPI VNI
Sbjct: 62   KIVRANDRIVSGIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNI 121

Query: 3360 EY-RGQSQSTETLKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKG 3184
            EY +G      T++K DV+IGR+PIMLRS  CVLY KDE ELA LGECPLDPGGYFIIKG
Sbjct: 122  EYVQGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKG 181

Query: 3183 TEKVILIQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSK 3004
            TEKV+LIQEQLSKNR+IID DKKG + ASVTSST   KSKTVI+MEK K+YL LNQF  K
Sbjct: 182  TEKVLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKK 241

Query: 3003 VPIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQ 2824
            +PIMVVMKAMGMESDQEVVQM+GRDPRYSALLLPSIEECA  ++YTQ++AL+YLE +VK+
Sbjct: 242  IPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKR 301

Query: 2823 LPYPSAPVEK--RALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDK 2650
              + S P ++  RA SIL D+F+AN+PV   NFR KC YVAVMLRRM+EA+LNKDAMDDK
Sbjct: 302  STFGSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDK 361

Query: 2649 DYVGNKRLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDSITV 2470
            DYVGNKRLELSGQ++SLLFEDLFKTM  EV+KT+D IL KPSRSSRFD+SQ+IV+DSITV
Sbjct: 362  DYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITV 421

Query: 2469 GLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQP 2290
            GLER+LSTGN+DVKRF+MHRKGMTQV+ARLS+IGTLGHMT++SPQFEKSRKVSGPRALQP
Sbjct: 422  GLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQP 481

Query: 2289 SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHM 2110
            SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGP++SLCYCLGVEDLELLSGEELH 
Sbjct: 482  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHN 541

Query: 2109 PNSFLIILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVC 1930
            PNSFL+I NGLILGKHR+P+ FA+ MRKLRRAGKIGEFVS++VNE QRCVYIASDGGRVC
Sbjct: 542  PNSFLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVC 601

Query: 1929 RPLVIADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPE 1750
            RPLVIADKG+SRIKEHHMKEL DGVR+FD FLREGLIEYLDVNEENNALIALYE +ATP+
Sbjct: 602  RPLVIADKGISRIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPD 661

Query: 1749 TTHIEIEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLV 1570
            TTHIEIEP TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+N+LCRMD+L+YLLV
Sbjct: 662  TTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLV 721

Query: 1569 YPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK 1390
            YPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+K
Sbjct: 722  YPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVK 781

Query: 1389 KMSAISQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVI 1210
            K +AI+QKY N TSDRI+RP R G  +ERMQILDDDGLAAPGEII+P+D+YINKESP   
Sbjct: 782  KYTAINQKYANSTSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLET 841

Query: 1209 RGPVTSPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVG 1030
            RG + SP G +DS Y+ ++QTYKGP+GET VVDRVALCSDKN +LCIK++IRHTRRPE+G
Sbjct: 842  RGSIMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELG 901

Query: 1029 DKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVS 850
            DKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS
Sbjct: 902  DKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVS 961

Query: 849  SGRFHYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYY 670
             GRFHYGSAFGEPSGHADTVE+ISETLV HGFSYNGKD +YSGITG PLQAYI+MGPIYY
Sbjct: 962  CGRFHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYY 1021

Query: 669  QKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLM 490
            QKLKHMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM
Sbjct: 1022 QKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLM 1081

Query: 489  ISSDPFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIV 310
            +SSDPFEVQVCR CGLLGYYN+KLK GICSTCKNG+NIS+MKLPYACKLLIQELQSMNIV
Sbjct: 1082 VSSDPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIV 1141

Query: 309  PRLKLTAA 286
            PRLKL  A
Sbjct: 1142 PRLKLAEA 1149


>gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1915 bits (4961), Expect = 0.0
 Identities = 943/1143 (82%), Positives = 1040/1143 (90%), Gaps = 4/1143 (0%)
 Frame = -1

Query: 3702 NNDTNELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFAN 3523
            N++ +E+ +DK  LAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV+T IKKIV AN
Sbjct: 16   NSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRAN 75

Query: 3522 EWIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEYRGQS 3343
            + I S VD  +YLR+ DVRIGEPSM I+ V+EK+ PH CRLSD TYAAPIFVNIEY   S
Sbjct: 76   DRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGS 135

Query: 3342 QSTET-LKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVIL 3166
               +T L+K D++IGRMPIMLRS  CVLY KDE ELA LGECPLDPGGYF+IKG EKVIL
Sbjct: 136  HGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVIL 195

Query: 3165 IQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVV 2986
            IQEQLSKNRIIID DKKG + ASVTSS+  TKSKTVI+MEKEKIYL LNQF  K+PIMVV
Sbjct: 196  IQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVV 255

Query: 2985 MKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPY--P 2812
            MKAMGMESDQEVVQM+GRDP Y+A+LLPSIEECA   +YTQ+QAL+YLE +VK++ Y  P
Sbjct: 256  MKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGP 315

Query: 2811 SAPVEKRALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNK 2632
            ++  E RALSIL D+F+AN+PVR  NFR KC+YVAVMLRRM+EA+LNKDAMDDKDYVGNK
Sbjct: 316  ASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNK 375

Query: 2631 RLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYI-VKDSITVGLERS 2455
            RLELSGQ++SLLFEDLFKT   EV+K ID +L KPSRSS  D SQ++  +++IT GLER+
Sbjct: 376  RLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERT 435

Query: 2454 LSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2275
            LSTGN+D+KRF+MHRKGMTQV+ARLS+IGTLG+MTK+SPQFEKSRKVSGPRALQPSQWGM
Sbjct: 436  LSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGM 495

Query: 2274 LCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFL 2095
            LCPCDTPEGEACGLVKNLALMTHVTTDE+EGP++SLCYCLGVEDLELLSGEELH PNSFL
Sbjct: 496  LCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFL 555

Query: 2094 IILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVI 1915
            +ILNGLILGKHR+PQ FA AMRKLRRAGK+GEFVS++VNE QRCVYIASDGGRVCRPLVI
Sbjct: 556  VILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVI 615

Query: 1914 ADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPETTHIE 1735
            ADKGVSRIKEHHMKEL DGVR FD FLR+GLIEYLDVNEENNALIALYE EATPETTHIE
Sbjct: 616  ADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIE 675

Query: 1734 IEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQRP 1555
            IEP TILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+LCRMDTL+YLLVYPQRP
Sbjct: 676  IEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRP 735

Query: 1554 LLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAI 1375
            LLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ SA+
Sbjct: 736  LLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAV 795

Query: 1374 SQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIRGPVT 1195
            +QKYE G SDRI+RPQR G  +ERMQILDDDG+A PGEIIRP+DIYINKES    RG   
Sbjct: 796  NQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRV 855

Query: 1194 SPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGDKFSS 1015
            S   L DS Y+P++QTYKGPEGE+ VVDRVALC+D+N+NL IK++IRHTRRPEVGDKFSS
Sbjct: 856  SSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSS 915

Query: 1014 RHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFH 835
            RHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFH
Sbjct: 916  RHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 975

Query: 834  YGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQKLKH 655
            YGSAFGEPSGHAD VEAISETL+ HGFSYNGKDF+YSGITG PLQAYI+MGPIYYQKLKH
Sbjct: 976  YGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKH 1035

Query: 654  MVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDP 475
            MVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLMISSDP
Sbjct: 1036 MVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDP 1095

Query: 474  FEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKL 295
            FEVQVCRKCGLLGYY++KLK GICS+CKNGDN+STMKLPYACKLLIQELQSMNIVPRLKL
Sbjct: 1096 FEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKL 1155

Query: 294  TAA 286
            + A
Sbjct: 1156 SEA 1158


>gb|EOY19611.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1901 bits (4924), Expect = 0.0
 Identities = 938/1143 (82%), Positives = 1035/1143 (90%), Gaps = 4/1143 (0%)
 Frame = -1

Query: 3702 NNDTNELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFAN 3523
            N++ +E+ +DK  LAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV+T IKKIV AN
Sbjct: 16   NSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRAN 75

Query: 3522 EWIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEYRGQS 3343
            + I S VD  +YLR+ DVRIGEPSM I+ V+EK+ PH CRLSD TYAAPIFVNIEY   S
Sbjct: 76   DRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGS 135

Query: 3342 QSTET-LKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVIL 3166
               +T L+K D++IGRMPIMLRS  CVLY KDE ELA LGECPLDPGGYF+IKG EK   
Sbjct: 136  HGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEK--- 192

Query: 3165 IQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVV 2986
              EQLSKNRIIID DKKG + ASVTSS+  TKSKTVI+MEKEKIYL LNQF  K+PIMVV
Sbjct: 193  --EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVV 250

Query: 2985 MKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPY--P 2812
            MKAMGMESDQEVVQM+GRDP Y+A+LLPSIEECA   +YTQ+QAL+YLE +VK++ Y  P
Sbjct: 251  MKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGP 310

Query: 2811 SAPVEKRALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNK 2632
            ++  E RALSIL D+F+AN+PVR  NFR KC+YVAVMLRRM+EA+LNKDAMDDKDYVGNK
Sbjct: 311  ASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNK 370

Query: 2631 RLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYI-VKDSITVGLERS 2455
            RLELSGQ++SLLFEDLFKT   EV+K ID +L KPSRSS  D SQ++  +++IT GLER+
Sbjct: 371  RLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERT 430

Query: 2454 LSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2275
            LSTGN+D+KRF+MHRKGMTQV+ARLS+IGTLG+MTK+SPQFEKSRKVSGPRALQPSQWGM
Sbjct: 431  LSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGM 490

Query: 2274 LCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFL 2095
            LCPCDTPEGEACGLVKNLALMTHVTTDE+EGP++SLCYCLGVEDLELLSGEELH PNSFL
Sbjct: 491  LCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFL 550

Query: 2094 IILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVI 1915
            +ILNGLILGKHR+PQ FA AMRKLRRAGK+GEFVS++VNE QRCVYIASDGGRVCRPLVI
Sbjct: 551  VILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVI 610

Query: 1914 ADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPETTHIE 1735
            ADKGVSRIKEHHMKEL DGVR FD FLR+GLIEYLDVNEENNALIALYE EATPETTHIE
Sbjct: 611  ADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIE 670

Query: 1734 IEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQRP 1555
            IEP TILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+LCRMDTL+YLLVYPQRP
Sbjct: 671  IEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRP 730

Query: 1554 LLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAI 1375
            LLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ SA+
Sbjct: 731  LLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAV 790

Query: 1374 SQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIRGPVT 1195
            +QKYE G SDRI+RPQR G  +ERMQILDDDG+A PGEIIRP+DIYINKES    RG   
Sbjct: 791  NQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRV 850

Query: 1194 SPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGDKFSS 1015
            S   L DS Y+P++QTYKGPEGE+ VVDRVALC+D+N+NL IK++IRHTRRPEVGDKFSS
Sbjct: 851  SSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSS 910

Query: 1014 RHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFH 835
            RHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFH
Sbjct: 911  RHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 970

Query: 834  YGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQKLKH 655
            YGSAFGEPSGHAD VEAISETL+ HGFSYNGKDF+YSGITG PLQAYI+MGPIYYQKLKH
Sbjct: 971  YGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKH 1030

Query: 654  MVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDP 475
            MVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLMISSDP
Sbjct: 1031 MVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDP 1090

Query: 474  FEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKL 295
            FEVQVCRKCGLLGYY++KLK GICS+CKNGDN+STMKLPYACKLLIQELQSMNIVPRLKL
Sbjct: 1091 FEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKL 1150

Query: 294  TAA 286
            + A
Sbjct: 1151 SEA 1153


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1875 bits (4858), Expect = 0.0
 Identities = 931/1143 (81%), Positives = 1023/1143 (89%), Gaps = 3/1143 (0%)
 Frame = -1

Query: 3705 GNNDTN--ELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIV 3532
            GNN+ N  E  IDK  L APIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV+  IKKIV
Sbjct: 11   GNNEQNLVEQLIDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIV 70

Query: 3531 FANEWIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEYR 3352
             AN+ I S VD  +YLR+ DVRIG PS I+DGV+E+L+PH CRLSD TYAAPI VN+EY 
Sbjct: 71   RANDRIVSTVDPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYI 130

Query: 3351 GQSQSTET-LKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEK 3175
              S   +T ++K DV+IGRMPIMLRS++CVLY KDE ELA LGECPLDPGGYF+IKGTEK
Sbjct: 131  YGSHDQKTRVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEK 190

Query: 3174 VILIQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPI 2995
            VILIQEQLSKNRIIID DKKG + ASVTSST  TKSKT+I+MEKEK+YL LNQF  K+PI
Sbjct: 191  VILIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPI 250

Query: 2994 MVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPY 2815
            MVV+KAMGMESDQEVVQM+GRDPRYSALLLPSIEECA  ++YTQQ+AL+YL+ +      
Sbjct: 251  MVVIKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGK------ 304

Query: 2814 PSAPVEKRALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGN 2635
                 E RAL+IL D+F+AN+PV + NFR KC+YVAVMLRRMMEA+LNKDAMDDKDYVGN
Sbjct: 305  -----ENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGN 359

Query: 2634 KRLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDSITVGLERS 2455
            KRLELSGQ++SLLFEDLFKTM  EV++TID +L K +RSSRFD++QYIV+D+IT GLER+
Sbjct: 360  KRLELSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERT 419

Query: 2454 LSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2275
            LSTGN+DVKRF+MHRKGMTQV+ RLSYI +LG MT++SPQFEKSRKVSGPRALQPSQWGM
Sbjct: 420  LSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGM 479

Query: 2274 LCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFL 2095
            LCPCDTPEGEACGLVKNLALMTHVTTD+EEGP++SLCYCLGVEDLELLSGEELH PNSFL
Sbjct: 480  LCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFL 539

Query: 2094 IILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVI 1915
            +I NGLILGKHR+PQ F N+MRKLRRAGKIGEFVS++VNE QR VY+ASDGGRVCRPLVI
Sbjct: 540  VIFNGLILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVI 599

Query: 1914 ADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPETTHIE 1735
            AD+GVSRIKEHHMKEL+DGVR FD FLR+GLIEYLDVNEENNAL+ALYE EATPETTHIE
Sbjct: 600  ADRGVSRIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIE 659

Query: 1734 IEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQRP 1555
            IEP TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD+L+YLLVYPQRP
Sbjct: 660  IEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRP 719

Query: 1554 LLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAI 1375
            LLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK  AI
Sbjct: 720  LLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAI 779

Query: 1374 SQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIRGPVT 1195
             QKYENG SDRI+RP R     ER ++LD DGLAAPGEII+P DIY+ KE P    GPV 
Sbjct: 780  RQKYENGASDRILRPDR---TVERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVK 836

Query: 1194 SPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGDKFSS 1015
            S A L +  Y+PS  +YKGPEGE+ V+DRVAL SD+NNNLCIK MIRHTRRPEVGDKFSS
Sbjct: 837  SSAALENIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSS 896

Query: 1014 RHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFH 835
            RHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFH
Sbjct: 897  RHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 956

Query: 834  YGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQKLKH 655
            YGSAFGEPSGHADTVEAISETLVN GFSYNGKD +YSGITG PLQAYI+MGPIYYQKLKH
Sbjct: 957  YGSAFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKH 1016

Query: 654  MVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDP 475
            MVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLMISSDP
Sbjct: 1017 MVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDP 1076

Query: 474  FEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKL 295
            FEVQVCR CGLLGY+N KL+ GICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKL
Sbjct: 1077 FEVQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKL 1136

Query: 294  TAA 286
              A
Sbjct: 1137 AEA 1139


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1858 bits (4813), Expect = 0.0
 Identities = 922/1144 (80%), Positives = 1019/1144 (89%), Gaps = 5/1144 (0%)
 Frame = -1

Query: 3702 NNDTNELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFAN 3523
            N++  +  IDK F+  PIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV+TEIKKIV AN
Sbjct: 18   NSNPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKAN 77

Query: 3522 EWIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEYRGQS 3343
            + I S  D  +YLR+ DVRIGEPS+ ++ V+E + PH CRLSD TYAAPI V+IEY  +S
Sbjct: 78   DRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEES 137

Query: 3342 QSTETLK-KKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVIL 3166
             + +  + KKDV+IGRMPIMLRS+ CVL+ KDE ELA LGECPLDPGGYFIIKGTEKV+L
Sbjct: 138  HAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVL 197

Query: 3165 IQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKS-KVPIMV 2989
            IQEQLSKNRIIID DKKG + ASVTSST  TKSKTVIKME EKIYL LN F + K+PIMV
Sbjct: 198  IQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMV 257

Query: 2988 VMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPYPS 2809
            V+KAMGMES QEVVQM+GRDPRY ALLLPSIEECAK  +YTQ+QAL+YLE +VK+  + S
Sbjct: 258  VLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFAS 317

Query: 2808 APVEK--RALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGN 2635
            AP EK  RAL IL D+F+AN+PV + NF  KCIYVAVM+RRMM+A+L+KDAMDDKDYVGN
Sbjct: 318  APPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGN 377

Query: 2634 KRLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDSITVGLERS 2455
            KRLELSGQ++SLLFEDLFKTM  EV+KTID +L K SRSSRFD SQ++  + I+ GLER+
Sbjct: 378  KRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERT 437

Query: 2454 LSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2275
            LSTGNWDVKRFRMHRKGM+QV+ARLS+I T+GH+T++SPQFEKSRKVSGPRALQPSQWGM
Sbjct: 438  LSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGM 497

Query: 2274 LCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFL 2095
            LCPCDTPEGEACGLVKNLALMTHVTTD+EEGP++SLCYCLGVEDLELLS EELH PNSFL
Sbjct: 498  LCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFL 557

Query: 2094 IILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVI 1915
            +I NG ILGKHR+PQ FA  MR LRRAGKIGEFVS++VNE Q CVYIASDGGRVCRPLVI
Sbjct: 558  VIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVI 617

Query: 1914 ADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPETTHIE 1735
            ADKGVSRIKE+HMKEL DGVR FD FLR+GLIEYLDVNEENNALIALYE EATPETTHIE
Sbjct: 618  ADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIE 677

Query: 1734 IEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQRP 1555
            IEP TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDTL+YLLVYPQRP
Sbjct: 678  IEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRP 737

Query: 1554 LLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAI 1375
            LLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK S++
Sbjct: 738  LLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSV 797

Query: 1374 SQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIRGPVT 1195
            +QKYEN T+DRI+RP R       MQILDDDGLAAPGEIIRP+DIY+NK+SP +++G   
Sbjct: 798  NQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIIMKG--- 854

Query: 1194 SP-AGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGDKFS 1018
            SP  G+ D+ Y+P +Q +KG EGE  VVDRVAL +DKN+ LCIK++IR TRRPE+GDKFS
Sbjct: 855  SPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFS 914

Query: 1017 SRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRF 838
            SRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRF
Sbjct: 915  SRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRF 974

Query: 837  HYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQKLK 658
            HYGSAFGEPSGHAD V+AISETL+  GFSYNGKDFLYSGITG PLQAYI+MGPIYYQKLK
Sbjct: 975  HYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLK 1034

Query: 657  HMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSD 478
            HMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLMISSD
Sbjct: 1035 HMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSD 1094

Query: 477  PFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLK 298
            PFEVQVCR CGLLGYYN+KLK GICS+CKNGDNISTMKLPYACKLLIQELQSMNIVPRLK
Sbjct: 1095 PFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLK 1154

Query: 297  LTAA 286
            L  A
Sbjct: 1155 LAEA 1158


>ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            tuberosum]
          Length = 1151

 Score = 1849 bits (4790), Expect = 0.0
 Identities = 931/1151 (80%), Positives = 1023/1151 (88%), Gaps = 7/1151 (0%)
 Frame = -1

Query: 3717 TVQEGNNDTNELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKK 3538
            T+   +N+ N  GIDK +LA+PIK++VDK+QL+PEFLKVRGLVKQHL SFNY V T+IKK
Sbjct: 8    TMSSPSNNLNN-GIDKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLASFNYLVKTDIKK 66

Query: 3537 IVFANEWIRSKV-DERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNI 3361
            IV AN  IRS   D  +YLRY DVRIGEPSM  DGV EKL+P KCRL+D TYAAPIFV +
Sbjct: 67   IVRANHEIRSSTRDPNIYLRYRDVRIGEPSMTYDGVREKLSPQKCRLADLTYAAPIFVTV 126

Query: 3360 EYR-GQSQSTETLKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKG 3184
            +Y   ++     L +KDV+I RMPIMLRS  CVLY+KDEE+LA LGECPLDPGGYFI+ G
Sbjct: 127  DYTMTRNGQISMLTQKDVVIARMPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFIVNG 186

Query: 3183 TEKVILIQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSK 3004
             EKVILIQEQLSKNRIIID D+KGCVQASV  ST  TKSKT+IKMEKEK+YL LN FK+K
Sbjct: 187  REKVILIQEQLSKNRIIIDTDRKGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMFKTK 246

Query: 3003 VPIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLE--KQV 2830
            VPIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECA   +YTQ QAL++LE  K +
Sbjct: 247  VPIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECADLKLYTQHQALEFLESDKML 306

Query: 2829 KQLPYPSAPVEK--RALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMD 2656
                Y +APVEK  RALSIL D+F+A++PV Q NFR KCIYVAVM+RR+MEA+LNKDAMD
Sbjct: 307  TMPSYYNAPVEKGARALSILRDMFLAHVPVHQHNFRKKCIYVAVMMRRVMEAILNKDAMD 366

Query: 2655 DKDYVGNKRLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDS- 2479
            DKDYVGNKRLELSGQ+LSLLFEDLFKTMNDEVR+  DA     S+SS  D+  ++ K + 
Sbjct: 367  DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEVRREFDA----SSKSS--DLLYHVKKSNR 420

Query: 2478 ITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRA 2299
            ITV L+R+LSTGNWD+KRFRMHRKGMT+V+ARLSYIGTLG+MTKI PQFEKSRKVSGPRA
Sbjct: 421  ITVELQRTLSTGNWDIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRA 480

Query: 2298 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEE 2119
            LQPSQ+GM+CPCDTPEGEACGLVKNLALMTHVTTDE+  PI+SLCY LGVEDLE LS  E
Sbjct: 481  LQPSQFGMICPCDTPEGEACGLVKNLALMTHVTTDEDARPIMSLCYDLGVEDLEQLSAAE 540

Query: 2118 LHMPNSFLIILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGG 1939
            LH PNS+LIILNGLILGKH+ PQRFAN MRKLRRAG+I EFVSI+VN+ Q CVYIASDGG
Sbjct: 541  LHTPNSYLIILNGLILGKHKSPQRFANGMRKLRRAGRIREFVSIFVNDKQCCVYIASDGG 600

Query: 1938 RVCRPLVIADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEA 1759
            RVCRPLVIA+KGVSRIKEHHM EL+DGVR+F+SFLR+GLIEYLDVNEENN+LIALYE EA
Sbjct: 601  RVCRPLVIAEKGVSRIKEHHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEA 660

Query: 1758 TPETTHIEIEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIY 1579
            TP+TTHIEIEP TILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD L+Y
Sbjct: 661  TPDTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLY 720

Query: 1578 LLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1399
            LLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 721  LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 780

Query: 1398 VMKKMSAISQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESP 1219
            VMKK +AI QKY+N TSDR+I+PQRQG +AE+MQILDDDGLA+PGEIIR  DIYINKESP
Sbjct: 781  VMKKYAAICQKYKNLTSDRLIKPQRQGSEAEKMQILDDDGLASPGEIIRNRDIYINKESP 840

Query: 1218 KVIRGPVTSPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRP 1039
             V    VTSP GL DS YK S+QTYKG EGE  V+DRVAL SD+NNNL IK+MIR TRRP
Sbjct: 841  TVTITQVTSPMGLPDSAYKSSRQTYKGTEGEPTVIDRVALHSDENNNLSIKFMIRQTRRP 900

Query: 1038 EVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 859
            E+GDKFSSRHGQKGVCG IVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA
Sbjct: 901  EIGDKFSSRHGQKGVCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 960

Query: 858  GVSSGRFHYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGP 679
            GVS GRFHYGSAFGEPSGHADTV+AISETLV HGFSYNGKDF+YSGITGMPLQAYI+MGP
Sbjct: 961  GVSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGP 1020

Query: 678  IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 499
            IYYQKLKHMVLDKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLI+E
Sbjct: 1021 IYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHE 1080

Query: 498  RLMISSDPFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSM 319
            RLM+SSDPFE QVCRKCGLLGYYNYKLK GICS CKNG+N+ST+KLPYACKLL QELQSM
Sbjct: 1081 RLMLSSDPFEAQVCRKCGLLGYYNYKLKIGICSMCKNGENMSTLKLPYACKLLFQELQSM 1140

Query: 318  NIVPRLKLTAA 286
            NIVPRLKLT A
Sbjct: 1141 NIVPRLKLTEA 1151


>ref|XP_004249177.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            lycopersicum]
          Length = 1149

 Score = 1833 bits (4748), Expect = 0.0
 Identities = 922/1150 (80%), Positives = 1016/1150 (88%), Gaps = 6/1150 (0%)
 Frame = -1

Query: 3717 TVQEGNNDTNELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKK 3538
            T+    N+ N  GIDK +LA+PIK++VDK+QL+PEFLKVRGLVKQHL SFNY V T+I+K
Sbjct: 8    TMSSPRNNLNN-GIDKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLASFNYLVKTDIRK 66

Query: 3537 IVFANEWIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIE 3358
            IV AN  IRS  D  ++LRY DVRIGEPSM  DGV EKL+P KCRL+D TYAAPIFV ++
Sbjct: 67   IVRANHEIRSTRDPNIFLRYRDVRIGEPSMTYDGVREKLSPQKCRLADLTYAAPIFVTVD 126

Query: 3357 YRG-QSQSTETLKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGT 3181
            Y   ++       +KDV+IGRMPIMLRS  CVLY+KDEE+LA LGECPLDPGGYF++ G 
Sbjct: 127  YTMIRNGQISMATQKDVVIGRMPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFVVNGR 186

Query: 3180 EKVILIQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKV 3001
            EKVILIQEQLSKNRIIID D+KGCVQASV  ST  TKSKT+IKMEKEK+YL LN FK+KV
Sbjct: 187  EKVILIQEQLSKNRIIIDTDRKGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMFKTKV 246

Query: 3000 PIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLE--KQVK 2827
            PIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECA   +YTQ QAL++LE  K  +
Sbjct: 247  PIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECADLKLYTQHQALEFLENDKMFR 306

Query: 2826 QLPYPSAPVEK--RALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDD 2653
               Y + PVEK  RALSIL D+F+A++PV Q NFR KCIYVAVM+RRMMEA+LNKDAMDD
Sbjct: 307  MPSYSTGPVEKGARALSILRDMFLAHVPVNQHNFRKKCIYVAVMMRRMMEAILNKDAMDD 366

Query: 2652 KDYVGNKRLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDS-I 2476
            KDYVGNKRLELSGQ+LSLLFEDLFK+MNDE R+  DA   KPS     D+  ++ + + I
Sbjct: 367  KDYVGNKRLELSGQLLSLLFEDLFKSMNDEARREFDAY-SKPS-----DLLYHVKRSNRI 420

Query: 2475 TVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRAL 2296
            TV L+R+LSTGNWD+KRFRMHRKGMT+V+ARLSYIGTLG+MTKI PQFEKSRKVSGPRAL
Sbjct: 421  TVELQRALSTGNWDIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRAL 480

Query: 2295 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEEL 2116
            QPSQ+GM+CPCDTPEGEACGLVKNLALMTHVTTDE+E PI+SLCY LGVEDLE LS  EL
Sbjct: 481  QPSQFGMICPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYDLGVEDLEQLSAAEL 540

Query: 2115 HMPNSFLIILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGR 1936
            H PNS+LIILNGLILGKHR PQRFAN MRKLRRAG+I EFVSI+VN+ Q CVYIASDGGR
Sbjct: 541  HTPNSYLIILNGLILGKHRSPQRFANGMRKLRRAGQIREFVSIFVNDKQCCVYIASDGGR 600

Query: 1935 VCRPLVIADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEAT 1756
            VCRPLVIA+KGVSRIKE HM EL+DGVR+F+SFLR+GLIEYLDVNEENN+LIALYE EAT
Sbjct: 601  VCRPLVIAEKGVSRIKELHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEAT 660

Query: 1755 PETTHIEIEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYL 1576
            P+TTHIEIEP TILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD L+YL
Sbjct: 661  PDTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 720

Query: 1575 LVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1396
            LVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 721  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 780

Query: 1395 MKKMSAISQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPK 1216
            MKK +A+ QKY+N TSDR+I+PQRQGY+AER  ILDDDGLA+PGEIIR  DIYINKESP 
Sbjct: 781  MKKHAAMCQKYKNLTSDRLIKPQRQGYEAER--ILDDDGLASPGEIIRNGDIYINKESPT 838

Query: 1215 VIRGPVTSPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPE 1036
            V    VTSP  L DS Y+ S+QTYKG EGE  V+DRVAL SD+NNNL IK+MIR TRRPE
Sbjct: 839  VTVATVTSPMDLPDSAYRLSRQTYKGTEGEPTVIDRVALHSDENNNLSIKFMIRQTRRPE 898

Query: 1035 VGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 856
            +GDKFSSRHGQKGVCG IVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG
Sbjct: 899  IGDKFSSRHGQKGVCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 958

Query: 855  VSSGRFHYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPI 676
            VS GRFHYGSAFGEPSGHADTV+AISETLV HGF YNGKDF+YSGITGMPLQAYI+MGPI
Sbjct: 959  VSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFCYNGKDFIYSGITGMPLQAYIFMGPI 1018

Query: 675  YYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 496
            YYQKLKHMV+DKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLI+ER
Sbjct: 1019 YYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHER 1078

Query: 495  LMISSDPFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMN 316
            LM+SSDPFE QVCRKCGLLGYYNYKLK GICS CKNG+N+STMKLPYACKLL QELQSMN
Sbjct: 1079 LMLSSDPFEAQVCRKCGLLGYYNYKLKIGICSMCKNGENMSTMKLPYACKLLFQELQSMN 1138

Query: 315  IVPRLKLTAA 286
            IVPRLKLT A
Sbjct: 1139 IVPRLKLTEA 1148


>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X3 [Citrus sinensis]
          Length = 1058

 Score = 1812 bits (4693), Expect = 0.0
 Identities = 884/1058 (83%), Positives = 972/1058 (91%), Gaps = 3/1058 (0%)
 Frame = -1

Query: 3450 MIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEY-RGQSQSTETLKKKDVIIGRMPIMLRSK 3274
            M +DGV+EKL PH CRLSD TYAAPI VNIEY +G      T++K DV+IGR+PIMLRS 
Sbjct: 1    MTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSC 60

Query: 3273 TCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVILIQEQLSKNRIIIDIDKKGCVQASV 3094
             CVLY KDE ELA LGECPLDPGGYFIIKGTEKV+LIQEQLSKNR+IID DKKG + ASV
Sbjct: 61   RCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASV 120

Query: 3093 TSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGMESDQEVVQMIGRDPRYSA 2914
            TSST   KSKTVI+MEK K+YL LNQF  K+PIMVVMKAMG+ESDQEVVQM+GRDPRYSA
Sbjct: 121  TSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIESDQEVVQMVGRDPRYSA 180

Query: 2913 LLLPSIEECAKANVYTQQQALDYLEKQVKQLPYPSAPVEK--RALSILADIFIANIPVRQ 2740
            LLLPSIEECA  ++YTQ++AL+YLE +VK+  + S P ++  RA SIL D+F+AN+PV  
Sbjct: 181  LLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHN 240

Query: 2739 QNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQMLSLLFEDLFKTMNDEV 2560
             NFR KC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQ++SLLFEDLFKTM  EV
Sbjct: 241  NNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEV 300

Query: 2559 RKTIDAILDKPSRSSRFDISQYIVKDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARL 2380
            +KT+D IL KPSRSSRFD+SQ+IV+DSITVGLER+LSTGN+DVKRF+MHRKGMTQV+ARL
Sbjct: 301  QKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARL 360

Query: 2379 SYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT 2200
            S+IGTLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT
Sbjct: 361  SFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT 420

Query: 2199 TDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFLIILNGLILGKHRKPQRFANAMRKLR 2020
            TDEEEGP++SLCYCLGVEDLELLSGEELH PNSFL+I NGLILGKHR+P+ FA+ MRKLR
Sbjct: 421  TDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLR 480

Query: 2019 RAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELKDGVRNFDS 1840
            RAGKIGEFVS++VNE QRCVYIASDGGRVCRPLVIADKG+SRIKEHHMKEL DGVR+FD 
Sbjct: 481  RAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRSFDD 540

Query: 1839 FLREGLIEYLDVNEENNALIALYESEATPETTHIEIEPLTILGVCAGLIPFPHHNQSPRN 1660
            FLREGLIEYLDVNEENNALIALYE +ATP+TTHIEIEP TILGV AGLIP+PHHNQSPRN
Sbjct: 541  FLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRN 600

Query: 1659 TYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAV 1480
            TYQCAMGKQAMGNIA+N+LCRMD+L+YLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAV
Sbjct: 601  TYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV 660

Query: 1479 MSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAISQKYENGTSDRIIRPQRQGYDAERM 1300
            MSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AI+QKY N TSDRI+RP R G  AERM
Sbjct: 661  MSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSDRILRPDRTGPGAERM 720

Query: 1299 QILDDDGLAAPGEIIRPHDIYINKESPKVIRGPVTSPAGLSDSDYKPSKQTYKGPEGETA 1120
            QILDDDGLAAPGEII+P+D+YINKESP   RG + SP G +DS Y+ ++QTYKGP+GET 
Sbjct: 721  QILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETC 780

Query: 1119 VVDRVALCSDKNNNLCIKYMIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGIC 940
            VVDRVALCSDKN +LCIK++IRHTRRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGIC
Sbjct: 781  VVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGIC 840

Query: 939  PDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEPSGHADTVEAISETLVNH 760
            PDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEPSGHADTVE+ISETLV H
Sbjct: 841  PDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKH 900

Query: 759  GFSYNGKDFLYSGITGMPLQAYIYMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGR 580
            GFSYNGKD +YSGITG PLQAYI+MGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEGR
Sbjct: 901  GFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGR 960

Query: 579  SRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCGLLGYYNYKLKKGICS 400
            +RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR CGLLGYYN+KLK GICS
Sbjct: 961  ARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICS 1020

Query: 399  TCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLTAA 286
            TCKNGDNIS+MKLPYACKLLIQELQSMNIVPRLKL  A
Sbjct: 1021 TCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1058


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score = 1810 bits (4688), Expect = 0.0
 Identities = 899/1158 (77%), Positives = 1013/1158 (87%), Gaps = 20/1158 (1%)
 Frame = -1

Query: 3699 NDTNELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFANE 3520
            ND N   IDK  L+APIKS  DKFQL+PEFLKVRGLVKQHLDSFNYF++  IKKIV AN 
Sbjct: 12   NDDNF--IDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIVHANC 69

Query: 3519 WIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEY-RGQS 3343
             I S  D  +YLR+ +VR+GEPS++   ++E++ PH CRL+D TYAAPI+VNIEY  G  
Sbjct: 70   RIASVTDPSIYLRFKNVRVGEPSIMNINISEEINPHMCRLADMTYAAPIYVNIEYVHGSH 129

Query: 3342 QSTETLKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVILI 3163
                T  K D IIGRMPIMLRS  CVL+ KDEEELA LGECPLDPGGYF+IKGTEKV+LI
Sbjct: 130  GKKATSVKNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLI 189

Query: 3162 QEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVVM 2983
            QEQLSKNRIIID DKKG + ASVTSST MTKSKTVI+MEKEKIYL+L+QF  K+PI++V+
Sbjct: 190  QEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFVKKIPIVIVL 249

Query: 2982 KAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPY-PSA 2806
            KAMGMESDQE+VQM+GRDPR+SA LLPSIEEC    V TQ+QALDYLE +VK+  Y P  
Sbjct: 250  KAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYGPPP 309

Query: 2805 PVEKRALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRL 2626
              + RAL IL D+F+A++PVR  NFR KC YV VMLRRM+EA+LNKD+MDDKDYVGNKRL
Sbjct: 310  EKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRL 369

Query: 2625 ELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIV----KDSITVGLER 2458
            ELSGQ++SLLFEDLFKTM  E  K +DAIL KPSR+SRFD SQY+     +++I+VGLER
Sbjct: 370  ELSGQLMSLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQNTISVGLER 429

Query: 2457 SLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWG 2278
            +LSTGN+D+KRFRMHRKGMTQV+ RLS+IG+LG +TKISPQFEKSRKVSGPR+LQPSQWG
Sbjct: 430  TLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWG 489

Query: 2277 MLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSF 2098
            MLCPCDTPEGE+CGLVKNLALMTHVTTDEEEGP+V++CY LGV DLE+LS EELH P+SF
Sbjct: 490  MLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSF 549

Query: 2097 LIILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLV 1918
            L+ILNGLILGKHR+PQ FAN++R+LRRAGKIGEFVS++ NE Q CVY+ASDGGRVCRPLV
Sbjct: 550  LVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLV 609

Query: 1917 IADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPE---- 1750
            IADKG+SR+K+HHMKEL+DGVR FD F+R+GLIEYLDVNEENNALIALYESEAT E    
Sbjct: 610  IADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESEATTELDEG 669

Query: 1749 ---------TTHIEIEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCR 1597
                     TTHIEIEP TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L R
Sbjct: 670  AEAAKIKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNR 729

Query: 1596 MDTLIYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1417
            MDTL+YLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMS SGYDIEDAIVMNKSSLDR
Sbjct: 730  MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSGYDIEDAIVMNKSSLDR 789

Query: 1416 GFGRCIVMKKMSAISQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIY 1237
            GFGRCIVMKK+ A  QKYENGT DRI+ PQR G DAE+MQILDDDG+A+PGEIIRP+D+Y
Sbjct: 790  GFGRCIVMKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDDDGIASPGEIIRPNDVY 849

Query: 1236 INKESPK-VIRGPVTSPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYM 1060
            I K+ P    R  +TSP  LSDS Y+P+++ +KGPEGET VVDRVALCSDK+ +LCIKY+
Sbjct: 850  IYKQIPVCTTRDKITSP--LSDSQYRPAREFFKGPEGETQVVDRVALCSDKSGSLCIKYI 907

Query: 1059 IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 880
            IRHTRRPE+GDKFSSRHGQKGVCGTI+QQEDFPFSE GICPDLIMNPHGFPSRMTVGKMI
Sbjct: 908  IRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMI 967

Query: 879  ELLGSKAGVSSGRFHYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQ 700
            ELLGSKAGVS GRFHYGSAFGE SGHAD VE IS+TLV+ GFSY+GKD LYSG++G PL+
Sbjct: 968  ELLGSKAGVSCGRFHYGSAFGERSGHADKVETISKTLVDKGFSYSGKDLLYSGLSGEPLE 1027

Query: 699  AYIYMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYG 520
            AYI+MGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEG+S+NGGLRVGEMERDCLIAYG
Sbjct: 1028 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYG 1087

Query: 519  ASMLIYERLMISSDPFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLL 340
            ASMLIYERLMISSDPFEVQVCR CGLLGYYNYKLKK +CSTCKNGDNI+TMKLPYACKLL
Sbjct: 1088 ASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCSTCKNGDNIATMKLPYACKLL 1147

Query: 339  IQELQSMNIVPRLKLTAA 286
             QELQSMN+VPRLKL  A
Sbjct: 1148 FQELQSMNVVPRLKLVEA 1165


>ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum]
            gi|557099252|gb|ESQ39616.1| hypothetical protein
            EUTSA_v10000748mg [Eutrema salsugineum]
          Length = 1164

 Score = 1806 bits (4678), Expect = 0.0
 Identities = 891/1149 (77%), Positives = 1004/1149 (87%), Gaps = 18/1149 (1%)
 Frame = -1

Query: 3678 IDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFANEWIRSKVD 3499
            +D+  L+APIKS  DKFQL+PEFLKVRGLVKQHLDSFNYFV+  IKKIV AN  I S +D
Sbjct: 17   VDRQKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFVNVGIKKIVRANSLITSSLD 76

Query: 3498 ERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEY-RGQSQSTETLK 3322
              +YLR+ +VR+GEPS++   + E++ PH CRL+D TYAAPI+VNIEY  G    T+   
Sbjct: 77   PEIYLRFKEVRVGEPSILNVNMAEEINPHMCRLADMTYAAPIYVNIEYAHGSHGKTQHSA 136

Query: 3321 KKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVILIQEQLSKN 3142
            K +VIIGRMPIMLRS  CVL+ KDEEELA LGECPLDPGGYF+IKGTEKV+LIQEQLSKN
Sbjct: 137  KDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKN 196

Query: 3141 RIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGMES 2962
            RIIID DKKG + ASVTSST MTKSKTVI+MEK KIYL+L+QF  K+PI++V+KAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKGKIYLFLHQFVKKIPIIIVLKAMGMES 256

Query: 2961 DQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPY-PSAPVEKRAL 2785
            DQE+VQM+GRDPR+SA LLPSIEEC    V T++QALDYLE +VK+  Y P    + RAL
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTRKQALDYLEAKVKKTSYGPPPEKDGRAL 316

Query: 2784 SILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQML 2605
             IL D+F+A++PVR  NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQ++
Sbjct: 317  YILRDVFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLI 376

Query: 2604 SLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKD---SITVGLERSLSTGNWD 2434
            SLLFEDLFKTM  E  K +D IL KP+R+SRFD SQ +  +   +I+ GLER+LSTGN+D
Sbjct: 377  SLLFEDLFKTMITEAVKKVDGILQKPNRASRFDFSQCLTGEKNHNISFGLERTLSTGNFD 436

Query: 2433 VKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 2254
            +KRFRMHRKGMTQV+ RLS+IG+LG +TKISPQFEKSRKVSGPR+LQPSQWGMLCPCDTP
Sbjct: 437  IKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTP 496

Query: 2253 EGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFLIILNGLI 2074
            EGE+CGLVKNLALMTHVTTDEEEGP+V++CY LGV DLE+LS EELH P+SFL+I NGLI
Sbjct: 497  EGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVIFNGLI 556

Query: 2073 LGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVIADKGVSR 1894
            LGKHR+PQ FAN++R+LRRAGKIGEFVS+++NE Q CVY+ASDGGRVCRPLVIADKGVSR
Sbjct: 557  LGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGGRVCRPLVIADKGVSR 616

Query: 1893 IKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPE------------ 1750
            +K+HHMKEL+DGVR FD F+R+GLIEYLDVNEENNALIALYES+AT E            
Sbjct: 617  VKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATSEMAETAEAAKIRE 676

Query: 1749 -TTHIEIEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLL 1573
             TTHIEIEP TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDTL+YLL
Sbjct: 677  GTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYLL 736

Query: 1572 VYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM 1393
            VYPQRPLLTT+TIELVGYDKLGAGQNATVAVMS +GYDIEDAIVMNK+SLDRGFGRCIVM
Sbjct: 737  VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDAIVMNKASLDRGFGRCIVM 796

Query: 1392 KKMSAISQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKV 1213
            KK+ A  QKY N   DRI+RPQR G DAE+MQILDDDG+AAPGEIIRP+D+YINK+ P  
Sbjct: 797  KKIVATCQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIAAPGEIIRPNDVYINKQIPVD 856

Query: 1212 IRGPVTSPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEV 1033
             R  +TSP  LSDS Y+P+++ +KGPEGET VVDRVALCSDKN NLCIKY+IRHTRRPE+
Sbjct: 857  TRDNITSP--LSDSQYRPAREYFKGPEGETQVVDRVALCSDKNGNLCIKYIIRHTRRPEL 914

Query: 1032 GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV 853
            GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV
Sbjct: 915  GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV 974

Query: 852  SSGRFHYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIY 673
             SGRFHYGSAFGE SGHAD VE IS TLV HGFSY+GKD LYSG++G PLQ Y++MGPIY
Sbjct: 975  CSGRFHYGSAFGERSGHADKVETISATLVKHGFSYSGKDLLYSGLSGEPLQTYVFMGPIY 1034

Query: 672  YQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERL 493
            YQKLKHMVLDKMHARGSGPRVM+TRQPTEG+S+NGGLRVGEMERDCLIAYGASMLIYERL
Sbjct: 1035 YQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERL 1094

Query: 492  MISSDPFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNI 313
            MISSDPFEVQVCR CGLLGYYNYKLKK  CSTCKNGDNI+TMKLPYACKLL QELQSMN+
Sbjct: 1095 MISSDPFEVQVCRTCGLLGYYNYKLKKAFCSTCKNGDNIATMKLPYACKLLFQELQSMNV 1154

Query: 312  VPRLKLTAA 286
            VPRLKL  A
Sbjct: 1155 VPRLKLVEA 1163


>ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Capsella rubella]
            gi|482548616|gb|EOA12810.1| hypothetical protein
            CARUB_v10025768mg [Capsella rubella]
          Length = 1160

 Score = 1796 bits (4652), Expect = 0.0
 Identities = 889/1158 (76%), Positives = 1009/1158 (87%), Gaps = 16/1158 (1%)
 Frame = -1

Query: 3711 QEGNNDTNELG-IDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKI 3535
            QE  + TN+   I+K  L+APIKS  DKFQL+PEFLKVRGLVKQHLDSFNY ++  IKKI
Sbjct: 5    QEDLDSTNDDNFINKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYLINVGIKKI 64

Query: 3534 VFANEWIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEY 3355
            V AN  I S  D  +YLR+  VR+GEPS++   + E++ PH CRL+D TYAAPI VNIEY
Sbjct: 65   VKANCLITSTADPSIYLRFKAVRVGEPSILNINMAEQINPHMCRLADMTYAAPIHVNIEY 124

Query: 3354 -RGQSQSTETLKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTE 3178
              G     +T  K +V+IGRMPIMLRS  CVL  KDE+ELA LGECPLDPGGYF+IKGTE
Sbjct: 125  VHGSHGEKQTSAKNNVLIGRMPIMLRSCRCVLNGKDEDELARLGECPLDPGGYFVIKGTE 184

Query: 3177 KVILIQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVP 2998
            KV+LIQEQLSKNRIIID DKKG + ASVTSST MTKSKTVI+MEKE+IYL+L+QF  K+P
Sbjct: 185  KVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKERIYLFLHQFVKKIP 244

Query: 2997 IMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLP 2818
            I++V+KAMGMESDQE+VQM+GRDPR+SA LLPSIEEC    V TQ+QALDYLE +VK+  
Sbjct: 245  IIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTS 304

Query: 2817 Y-PSAPVEKRALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYV 2641
            Y P    + RAL IL D+F+A++PVR  NFR KC YV VMLRRM+EA+LNKDAMDDKDYV
Sbjct: 305  YGPPLQKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYV 364

Query: 2640 GNKRLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDSITVGLE 2461
            GNKRLELSGQ++SLLFEDLFKTM  E  K +D IL K +R+SRFD SQ +  D I++GLE
Sbjct: 365  GNKRLELSGQLISLLFEDLFKTMITEAIKKVDVILTKQNRASRFDFSQCLSGDIISLGLE 424

Query: 2460 RSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQW 2281
            R+LSTGN+D+KRFRMHRKGMTQV+ RLS+IG+LG +TKISPQFEKSRKVSGPR+LQPSQW
Sbjct: 425  RTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQW 484

Query: 2280 GMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNS 2101
            GMLCPCDTPEGE+CGLVKNLALMTHVTTDEEEGP+V++CY LGV DLE+LS EELH P+S
Sbjct: 485  GMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDS 544

Query: 2100 FLIILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPL 1921
            FL+ILNGLILGKHR+PQ FAN++R+LRRAGKIGEFVS++ NE Q CVY+ASDGGRVCRPL
Sbjct: 545  FLVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPL 604

Query: 1920 VIADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPE--- 1750
            VIADKG+SR+K+HHMKEL+DGVR FD F+R+GLIEYLDVNEENNALIALYES+AT E   
Sbjct: 605  VIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATTELDE 664

Query: 1749 ----------TTHIEIEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELC 1600
                      TTHIEIEP TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L 
Sbjct: 665  GGEAAKIRADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLN 724

Query: 1599 RMDTLIYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 1420
            RMDTL+YLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD
Sbjct: 725  RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 784

Query: 1419 RGFGRCIVMKKMSAISQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDI 1240
            RGFGRCIVMKK+ A SQKY+N T DRI+RPQR G DAE+MQILD+DG+A+PGEIIRP+D+
Sbjct: 785  RGFGRCIVMKKIVATSQKYDNNTQDRILRPQRTGPDAEKMQILDNDGIASPGEIIRPNDV 844

Query: 1239 YINKESPKVIRGPVTSPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYM 1060
            YINK+SP   +  +T+   LSDS Y+P+++ +KGPEGET VVDRVALCS+K+++LCIKY+
Sbjct: 845  YINKQSPVDTKNKMTTQ--LSDSQYRPAREYFKGPEGETQVVDRVALCSNKHDHLCIKYI 902

Query: 1059 IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 880
            IRHTRRPE+GDKFSSRHGQKGVCGTI+QQEDFPFSE GICPDLIMNPHGFPSRMTVGKMI
Sbjct: 903  IRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMI 962

Query: 879  ELLGSKAGVSSGRFHYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQ 700
            ELLGSKAGVS GRFHYGSAFGE  GHAD VE IS TLVN GFSY+GKD LYSGI+G PLQ
Sbjct: 963  ELLGSKAGVSCGRFHYGSAFGERGGHADKVETISATLVNKGFSYSGKDLLYSGISGEPLQ 1022

Query: 699  AYIYMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYG 520
            AYI+MGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEG+S+NGGLRVGEMERDCLIAYG
Sbjct: 1023 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYG 1082

Query: 519  ASMLIYERLMISSDPFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLL 340
            ASMLIYERLM+SSDPFEVQVCR CGLLGYY+YKLKK  CSTCKNGDNI+TMKLPYACKLL
Sbjct: 1083 ASMLIYERLMVSSDPFEVQVCRACGLLGYYSYKLKKAFCSTCKNGDNIATMKLPYACKLL 1142

Query: 339  IQELQSMNIVPRLKLTAA 286
             QELQSMN+VPRLKL  A
Sbjct: 1143 FQELQSMNVVPRLKLIEA 1160


>ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis thaliana]
            gi|332007826|gb|AED95209.1| DNA-directed RNA polymerase
            RPC2 [Arabidopsis thaliana]
          Length = 1161

 Score = 1793 bits (4644), Expect = 0.0
 Identities = 892/1147 (77%), Positives = 1000/1147 (87%), Gaps = 16/1147 (1%)
 Frame = -1

Query: 3678 IDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFANEWIRSKVD 3499
            IDK  L+APIKS  DKFQL+PEFLKVRGLVKQHLDSFNYF++  I KIV AN  I S VD
Sbjct: 17   IDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSRITSTVD 76

Query: 3498 ERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEYRGQSQSTETLKK 3319
              +YLR+  VR+GEPS+I     E + PH CRL+D TYAAPIFVNIEY   S   +    
Sbjct: 77   PSIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEYVHGSHGNKAKSA 136

Query: 3318 KD-VIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVILIQEQLSKN 3142
            KD VIIGRMPIMLRS  CVL+ KDEEELA LGECPLDPGGYFIIKGTEKV+LIQEQLSKN
Sbjct: 137  KDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKN 196

Query: 3141 RIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGMES 2962
            RIIID DKKG + ASVTSST MTKSKTVI+MEKEKIYL+L++F  K+PI++V+KAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLKAMGMES 256

Query: 2961 DQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPYPSAPVEK-RAL 2785
            DQE+VQM+GRDPR+SA LLPSIEEC    V TQ+QALDYLE +VK++ Y + P +  RAL
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPPEKDGRAL 316

Query: 2784 SILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQML 2605
            SIL D+F+A++PV   NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQ++
Sbjct: 317  SILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLI 376

Query: 2604 SLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDS---ITVGLERSLSTGNWD 2434
            SLLFEDLFKTM  E  K +D IL+KP R+SRFD SQ + KDS   I++GLER+LSTGN+D
Sbjct: 377  SLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTLSTGNFD 436

Query: 2433 VKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 2254
            +KRFRMHRKGMTQV+ RLS+IG++G +TKISPQFEKSRKVSGPR+LQPSQWGMLCPCDTP
Sbjct: 437  IKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTP 496

Query: 2253 EGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFLIILNGLI 2074
            EGE+CGLVKNLALMTHVTTDEEEGP+V++CY LGV DLE+LS EELH P+SFL+ILNGLI
Sbjct: 497  EGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGLI 556

Query: 2073 LGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVIADKGVSR 1894
            LGKH +PQ FAN++R+LRRAGKIGEFVS++ NE Q CVY+ASD GRVCRPLVIADKG+SR
Sbjct: 557  LGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVIADKGISR 616

Query: 1893 IKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPE-----------T 1747
            +K+HHMKEL+DGVR FD F+R+GLIEYLDVNEENNALIALYES+ T E           T
Sbjct: 617  VKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDGTTELDEGAEAAKADT 676

Query: 1746 THIEIEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLVY 1567
            THIEIEP TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDTL+YLLVY
Sbjct: 677  THIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYLLVY 736

Query: 1566 PQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 1387
            PQRPLLTT+TIELVGYDKLGAGQNATVAVMS+SGYDIEDAIVMNKSSLDRGFGRCIVMKK
Sbjct: 737  PQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMKK 796

Query: 1386 MSAISQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIR 1207
            + A+SQKY+N T+DRI+ PQR G DAE+MQILDDDGLA PGEIIRP+DIYINK+ P    
Sbjct: 797  IVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINKQVPVDTV 856

Query: 1206 GPVTSPAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGD 1027
               TS   LSDS Y+P+++ +KGPEGET VVDRVALCSDK   LCIKY+IRHTRRPE+GD
Sbjct: 857  TKFTS--ALSDSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHTRRPELGD 914

Query: 1026 KFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSS 847
            KFSSRHGQKGVCG I+QQEDFPFSE GICPDLIMNPHGFPSRMTVGKMIELLGSKAGVS 
Sbjct: 915  KFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSC 974

Query: 846  GRFHYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQ 667
            GRFHYGSAFGE SGHAD VE IS TLV  GFSY+GKD LYSGI+G P++AYI+MGPIYYQ
Sbjct: 975  GRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQ 1034

Query: 666  KLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMI 487
            KLKHMVLDKMHARGSGPRVM+TRQPTEG+S+NGGLRVGEMERDCLIAYGASMLIYERLMI
Sbjct: 1035 KLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMI 1094

Query: 486  SSDPFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVP 307
            SSDPFEVQVCR CGLLGYYNYKLKK +C+TCKNGDNI+TMKLPYACKLL QELQSMN+VP
Sbjct: 1095 SSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVP 1154

Query: 306  RLKLTAA 286
            RLKLT A
Sbjct: 1155 RLKLTEA 1161


>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
            [Fragaria vesca subsp. vesca]
          Length = 1163

 Score = 1789 bits (4634), Expect = 0.0
 Identities = 886/1138 (77%), Positives = 994/1138 (87%), Gaps = 3/1138 (0%)
 Frame = -1

Query: 3690 NELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFANEWIR 3511
            + + IDK  LAAPIKSA DKF L+PEFLKVRGLVKQHLDSFNYFV+T IKKIV AN+ I 
Sbjct: 29   HHMDIDKELLAAPIKSAKDKFALIPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIV 88

Query: 3510 SKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEY-RGQSQST 3334
            S VD  ++LR+++V I  PS+  DGVT ++ PH CRLSD TY+API V++EY  G     
Sbjct: 89   SGVDPSIWLRFNNVYIDRPSLTTDGVTTEIAPHTCRLSDMTYSAPIRVDVEYVEGSHDQK 148

Query: 3333 ETLKKKDVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVILIQEQ 3154
                +K + IGR+PIMLRS  C LY K E ELA+LGECPLDPGGYFIIKG EKV+LIQEQ
Sbjct: 149  MIATRKGIEIGRLPIMLRSCCCTLYGKTESELATLGECPLDPGGYFIIKGNEKVLLIQEQ 208

Query: 3153 LSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVVMKAM 2974
            LSKNRIIID+DKKG V ASVTSS+   KSKT+I+MEK+KIYL LNQF  K+PIMVVMKAM
Sbjct: 209  LSKNRIIIDMDKKGNVNASVTSSSETIKSKTIIQMEKQKIYLELNQFSKKIPIMVVMKAM 268

Query: 2973 GMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPYPSAPVEK 2794
            GM SDQEVVQM+GRDPRY ALL+PSIEECAK  +YT++QAL YLE +VK+  + SA  +K
Sbjct: 269  GMTSDQEVVQMVGRDPRYGALLMPSIEECAKEGIYTKEQALLYLEPKVKRSMFDSASSDK 328

Query: 2793 --RALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLEL 2620
              + +++L DIFIAN+PVR+ NFR KCIYVAVMLRR+M+A+LNKD MDDKDYVGNKRLEL
Sbjct: 329  DSKVMAVLRDIFIANVPVRRSNFRPKCIYVAVMLRRIMDAILNKDTMDDKDYVGNKRLEL 388

Query: 2619 SGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDSITVGLERSLSTGN 2440
            SGQ +SLLFEDLFKTM  EVRKT+D IL KPSRSSRFD++QYI KD I++GLER+LSTGN
Sbjct: 389  SGQSISLLFEDLFKTMISEVRKTVDNILTKPSRSSRFDLAQYIRKDQISLGLERTLSTGN 448

Query: 2439 WDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 2260
            +D+KRF+MHR GMTQV+ARLS+IG+LG MT+  PQFEKSRKVSGPRALQPSQWGMLCPCD
Sbjct: 449  FDLKRFKMHRTGMTQVLARLSFIGSLGQMTRTKPQFEKSRKVSGPRALQPSQWGMLCPCD 508

Query: 2259 TPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFLIILNG 2080
            TPEGEACGLVKNLALM HVTTDEEEGP++SLC CLGVEDLE LS EELH PNSFL++ NG
Sbjct: 509  TPEGEACGLVKNLALMAHVTTDEEEGPLISLCKCLGVEDLETLSAEELHSPNSFLVLFNG 568

Query: 2079 LILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVIADKGV 1900
             ILGKHRKPQR A AMRKLRRAGKIGEFVS++VNE Q CVYIASDGGRVCRPLVIADKG+
Sbjct: 569  DILGKHRKPQRLATAMRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGI 628

Query: 1899 SRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPETTHIEIEPLT 1720
            SR+KE+HM+EL  GVR FD FL +GLIEYLDVNE+NNALIALYE EAT ETTHIEIEP T
Sbjct: 629  SRVKEYHMQELNAGVRTFDDFLSDGLIEYLDVNEQNNALIALYEDEATTETTHIEIEPFT 688

Query: 1719 ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQRPLLTTK 1540
            ILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L R+D L+YLLVYPQRPLLTTK
Sbjct: 689  ILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRID-LLYLLVYPQRPLLTTK 747

Query: 1539 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAISQKYE 1360
            TIELVG+DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI+MKK    +Q Y 
Sbjct: 748  TIELVGFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCILMKKFVVANQNYS 807

Query: 1359 NGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIRGPVTSPAGL 1180
            N T DRII+P +   D+ +M++LDDDG+AAPGEII  +DIY+ K+ P V RG + S  GL
Sbjct: 808  NNTQDRIIKPNKDEVDSGKMRVLDDDGIAAPGEIITANDIYVKKQVPIVTRGAIRS--GL 865

Query: 1179 SDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGDKFSSRHGQK 1000
             DSDY+ + Q YKGP+GE+ VVD+VAL SDK+NNLC+K +IRHTRRPEVGDKFSSRHGQK
Sbjct: 866  KDSDYRSTFQRYKGPDGESCVVDKVALFSDKHNNLCVKLLIRHTRRPEVGDKFSSRHGQK 925

Query: 999  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAF 820
            GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAF
Sbjct: 926  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 985

Query: 819  GEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQKLKHMVLDK 640
            GEPSGHAD VEAISETLV  GFSY+GKD++ SGITG PLQAYI+MGPIYYQKLKHMVLDK
Sbjct: 986  GEPSGHADKVEAISETLVRMGFSYDGKDYICSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1045

Query: 639  MHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 460
            MHARGSGPRV +TRQPTEG++RNGGLRVGEMERDCLIAYGASML+YERLMISSDPFEVQV
Sbjct: 1046 MHARGSGPRVSLTRQPTEGKARNGGLRVGEMERDCLIAYGASMLLYERLMISSDPFEVQV 1105

Query: 459  CRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLTAA 286
            CR CGLLGYYN+K+K GICS+CKNGDNISTMKLPYACKLLIQELQSMNIVPRLKL  A
Sbjct: 1106 CRVCGLLGYYNHKMKAGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1163


>gb|EPS66119.1| hypothetical protein M569_08657, partial [Genlisea aurea]
          Length = 1118

 Score = 1789 bits (4633), Expect = 0.0
 Identities = 884/1128 (78%), Positives = 995/1128 (88%), Gaps = 2/1128 (0%)
 Frame = -1

Query: 3663 LAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFANEWIRSKVDERVYL 3484
            L AP+K+AVDKF+L+PEFLKVRGLVKQHLDSFNYFV  +IKKIV  N  I S +DE+ YL
Sbjct: 3    LVAPVKNAVDKFRLVPEFLKVRGLVKQHLDSFNYFVEKQIKKIVQVNNRIESAIDEKCYL 62

Query: 3483 RYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEYRGQSQSTETLKKK-DVI 3307
             Y +V IGEPS++++ V EK+TP KCRLSD TYAAPI+V IE+  +S  ++T ++K +++
Sbjct: 63   SYEEVHIGEPSILVNDVWEKITPQKCRLSDMTYAAPIYVTIEFTTESNGSKTTRRKPNIV 122

Query: 3306 IGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVILIQEQLSKNRIIID 3127
            IG +PIMLRS++C+LY++DE+ELA  GECPLDPGGYFIIKGTEKVIL+ EQLSKNRIIID
Sbjct: 123  IGSLPIMLRSRSCILYERDEDELARYGECPLDPGGYFIIKGTEKVILMHEQLSKNRIIID 182

Query: 3126 IDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGMESDQEVV 2947
             D KGCVQA+VTS+T   KSKTVIKMEK KIYLYLNQF +KVPI++V+KAMG+ +DQE+V
Sbjct: 183  TDNKGCVQATVTSTTETIKSKTVIKMEKGKIYLYLNQFTTKVPIVIVIKAMGVVTDQEIV 242

Query: 2946 QMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPYPSAPVEKRALSILADI 2767
            QMIGRDPR+S LLLPS+E+C  A+V TQ QA+++LE++           E RALSIL DI
Sbjct: 243  QMIGRDPRFSELLLPSLEDCVAADVNTQYQAIEFLEEK-----------EGRALSILRDI 291

Query: 2766 FIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQMLSLLFED 2587
            FIAN+PV + NFR KC+YVAVMLRRMMEA++NKD MDDKDYVGNKRLELSGQMLSLLFED
Sbjct: 292  FIANVPVHENNFRPKCLYVAVMLRRMMEAIINKDTMDDKDYVGNKRLELSGQMLSLLFED 351

Query: 2586 LFKTMNDEVRKTIDAILDKPSRSSRFDISQYIVKDSITVGLERSLSTGNWDVKRFRMHRK 2407
            LFKTMND  R+  D IL K  R+++FD SQ+I+  +IT GLERSLSTGNWD+KRFRMHRK
Sbjct: 352  LFKTMNDISRQKADKILSK-KRTNKFDFSQHIIHSTITDGLERSLSTGNWDIKRFRMHRK 410

Query: 2406 GMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVK 2227
            GMTQ + RLSYI TLG MTKI+P FEKSRKVSGPRALQPSQWGMLCPCDTPEGE+CGLVK
Sbjct: 411  GMTQALTRLSYIETLGRMTKINPHFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVK 470

Query: 2226 NLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFLIILNGLILGKHRKPQR 2047
            NLALMTHVTTDE+E PI+SLCY LG+EDLEL+S EELH P+ FLI+LNGLILGKHR+PQ+
Sbjct: 471  NLALMTHVTTDEDEEPIISLCYSLGMEDLELVSAEELHNPDCFLIMLNGLILGKHRQPQK 530

Query: 2046 FANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKEL 1867
            FA+ MR LRRAG+IGEF+SI+VNE Q+ V IASDGGRVCRPLVIADKGVSRIK+ HMKEL
Sbjct: 531  FADTMRNLRRAGRIGEFISIFVNEKQQSVNIASDGGRVCRPLVIADKGVSRIKDRHMKEL 590

Query: 1866 KDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPETTHIEIEPLTILGVCAGLIPF 1687
            KDGVRNF+SF+REGLIEYLDVNEENNALIALYE  A   TTHIEIEP TILGVCAGLIP+
Sbjct: 591  KDGVRNFESFVREGLIEYLDVNEENNALIALYEENAKDGTTHIEIEPFTILGVCAGLIPY 650

Query: 1686 PHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQRPLLTTKTIELVGYDKLG 1507
            PHHNQSPRNTYQCAMGKQAMGNIAYN+LCR DTLIY+LVYPQRPLLTTKTIEL+ +DKLG
Sbjct: 651  PHHNQSPRNTYQCAMGKQAMGNIAYNQLCRADTLIYILVYPQRPLLTTKTIELIKFDKLG 710

Query: 1506 AGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAISQKYENGTSDRIIRPQ 1327
            AGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM K+SA+SQKY +G+SDRI+RPQ
Sbjct: 711  AGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMTKLSAVSQKYGDGSSDRILRPQ 770

Query: 1326 RQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIRGPVTSPAGLSDSDYKPSKQT 1147
            R+G DAER Q+LDDDGLA+PG IIRPHD YINKESP V     TS   L DS YKPS+QT
Sbjct: 771  REGRDAERNQVLDDDGLASPGLIIRPHDTYINKESPMVSTKLQTSSVTLPDSAYKPSRQT 830

Query: 1146 YKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGDKFSSRHGQKGVCGTIVQQED 967
            YKGPE ETAVVDRV L SDKNNNL IK MIR TRRPEVGDKFSSRHGQKGVCGTIVQQED
Sbjct: 831  YKGPETETAVVDRVMLFSDKNNNLIIKTMIRQTRRPEVGDKFSSRHGQKGVCGTIVQQED 890

Query: 966  FPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEPSGHADTVE 787
             PFSE G+CPDLIMNPHG+PSRMTVGKMIELLGSKAGVS GR+HYGSAFGE  GHAD VE
Sbjct: 891  LPFSELGVCPDLIMNPHGYPSRMTVGKMIELLGSKAGVSCGRYHYGSAFGERGGHADKVE 950

Query: 786  AISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQKLKHMVLDKMHARGSGPRVM 607
            AISETLV HGF Y+GKDFLYSGITG PLQAYI+MGPIYYQKLKHMV+DKMHAR SGPRVM
Sbjct: 951  AISETLVRHGFCYSGKDFLYSGITGEPLQAYIFMGPIYYQKLKHMVVDKMHARASGPRVM 1010

Query: 606  ITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQ-VCRKCGLLGYY 430
            +TRQPTEGRSRNGGLRVGEMERDCLIAYGASML+YERLM+SSDPFEVQ VCRKCGLLGYY
Sbjct: 1011 LTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLLYERLMLSSDPFEVQVVCRKCGLLGYY 1070

Query: 429  NYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLTAA 286
            ++KLK GICSTCK  +++STMKLPYACKLL QELQ+MNIVPRLKL+ A
Sbjct: 1071 DFKLKAGICSTCKETESMSTMKLPYACKLLFQELQAMNIVPRLKLSEA 1118


>gb|EOY19615.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
          Length = 1082

 Score = 1782 bits (4615), Expect = 0.0
 Identities = 880/1082 (81%), Positives = 968/1082 (89%), Gaps = 27/1082 (2%)
 Frame = -1

Query: 3450 MIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEYRGQSQSTET-LKKKDVIIGRMPIMLRSK 3274
            M I+ V+EK+ PH CRLSD TYAAPIFVNIEY   S   +T L+K D++IGRMPIMLRS 
Sbjct: 1    MTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSC 60

Query: 3273 TCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVILIQEQLSKNRIIIDIDKKGCVQASV 3094
             CVLY KDE ELA LGECPLDPGGYF+IKG EKVILIQEQLSKNRIIID DKKG + ASV
Sbjct: 61   CCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASV 120

Query: 3093 TSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGMESDQEVVQMIGRDPRYSA 2914
            TSS+  TKSKTVI+MEKEKIYL LNQF  K+PIMVVMKAMGMESDQEVVQM+GRDP Y+A
Sbjct: 121  TSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNA 180

Query: 2913 LLLPSIEECAKANVYTQQQALDYLEKQVKQLPY--PSAPVEKRALSILADIFIANIPVRQ 2740
            +LLPSIEECA   +YTQ+QAL+YLE +VK++ Y  P++  E RALSIL D+F+AN+PVR 
Sbjct: 181  VLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRS 240

Query: 2739 QNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQMLSLLFEDLFKTMNDEV 2560
             NFR KC+YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQ++SLLFEDLFKT   EV
Sbjct: 241  NNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEV 300

Query: 2559 RKTIDAILDKPSRSSRFDISQYI-VKDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVAR 2383
            +K ID +L KPSRSS  D SQ++  +++IT GLER+LSTGN+D+KRF+MHRKGMTQV+AR
Sbjct: 301  QKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLAR 360

Query: 2382 LSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHV 2203
            LS+IGTLG+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHV
Sbjct: 361  LSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHV 420

Query: 2202 TTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNSFLIILNGLILGKHRKPQRFANAMRKL 2023
            TTDE+EGP++SLCYCLGVEDLELLSGEELH PNSFL+ILNGLILGKHR+PQ FA AMRKL
Sbjct: 421  TTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKL 480

Query: 2022 RRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELKDGVRNFD 1843
            RRAGK+GEFVS++VNE QRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKEL DGVR FD
Sbjct: 481  RRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFD 540

Query: 1842 SFLREGLIEYLDVNEENNALIALYESEATPETTHIEIEPLTILGVCAGLIPFPHHNQSPR 1663
             FLR+GLIEYLDVNEENNALIALYE EATPETTHIEIEP TILGVCAGLIP+PHHNQSPR
Sbjct: 541  DFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPR 600

Query: 1662 NTYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQRPLLTTKTIELV-------------- 1525
            NTYQCAMGKQAMGNIAYN+LCRMDTL+YLLVYPQRPLLTT+TIELV              
Sbjct: 601  NTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRTIELVSGLYVVDYSTPFCP 660

Query: 1524 ---------GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIS 1372
                     GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ SA++
Sbjct: 661  VNCLLCFQVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVN 720

Query: 1371 QKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIRGPVTS 1192
            QKYE G SDRI+RPQR G  +ERMQILDDDG+A PGEIIRP+DIYINKES    RG   S
Sbjct: 721  QKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVS 780

Query: 1191 PAGLSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGDKFSSR 1012
               L DS Y+P++QTYKGPEGE+ VVDRVALC+D+N+NL IK++IRHTRRPEVGDKFSSR
Sbjct: 781  SESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSR 840

Query: 1011 HGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHY 832
            HGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHY
Sbjct: 841  HGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY 900

Query: 831  GSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQKLKHM 652
            GSAFGEPSGHAD VEAISETL+ HGFSYNGKDF+YSGITG PLQAYI+MGPIYYQKLKHM
Sbjct: 901  GSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 960

Query: 651  VLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPF 472
            VLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLMISSDPF
Sbjct: 961  VLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF 1020

Query: 471  EVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLT 292
            EVQVCRKCGLLGYY++KLK GICS+CKNGDN+STMKLPYACKLLIQELQSMNIVPRLKL+
Sbjct: 1021 EVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLS 1080

Query: 291  AA 286
             A
Sbjct: 1081 EA 1082


>gb|ESW24958.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
          Length = 1161

 Score = 1774 bits (4594), Expect = 0.0
 Identities = 879/1146 (76%), Positives = 994/1146 (86%), Gaps = 6/1146 (0%)
 Frame = -1

Query: 3705 GNNDTNELGIDKSFLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVSTEIKKIVFA 3526
            GN   ++ G D+  L APIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV TEIKKIV A
Sbjct: 18   GNKKPDDSGFDQRILTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRA 77

Query: 3525 NEWIRSKVDERVYLRYSDVRIGEPSMIIDGVTEKLTPHKCRLSDTTYAAPIFVNIEYRGQ 3346
            N  I +     +YLR+ +V+I +P ++ + VT+ +TP  CRLSD TYAAPI V++EY   
Sbjct: 78   NNLISATRHPHIYLRFLNVKIRKPCIMDESVTDDVTPQTCRLSDQTYAAPICVDVEYTHG 137

Query: 3345 SQSTETLKKK-DVIIGRMPIMLRSKTCVLYKKDEEELASLGECPLDPGGYFIIKGTEKVI 3169
            S+    L K+ +V IGRMPIMLRS  CVLY +D+ ELA LGECPLDPGGYF++KGTEKVI
Sbjct: 138  SRDDPRLHKRLNVEIGRMPIMLRSCCCVLYGRDQAELAKLGECPLDPGGYFVVKGTEKVI 197

Query: 3168 LIQEQLSKNRIIIDIDKKGCVQASVTSSTAMTKSKTVIKMEKEKIYLYLNQFKSKVPIMV 2989
            LIQEQLSKNRIIID DKKG + ASVTSST   K+KT+I ME EK++L+LNQF  KVP+M 
Sbjct: 198  LIQEQLSKNRIIIDTDKKGNIAASVTSSTEKIKTKTIIVMENEKLWLHLNQFPKKVPLMA 257

Query: 2988 VMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQQQALDYLEKQVKQLPYPS 2809
            VMKAMG+ESDQEV QM+GRDPRYS LLLPS EEC K NVYTQ+QAL+YL+K VK+  Y S
Sbjct: 258  VMKAMGIESDQEVTQMVGRDPRYSFLLLPSFEECRKCNVYTQEQALEYLDKMVKRSMYSS 317

Query: 2808 APVEK--RALSILADIFIANIPVRQQNFRSKCIYVAVMLRRMMEALLNKDAMDDKDYVGN 2635
               EK  RA S+L D+F+AN+PV   NFR KCIYVAVM+RR+M+A+LNKDAMDDKDYVGN
Sbjct: 318  NSAEKEGRAFSVLRDVFLANVPVDGDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGN 377

Query: 2634 KRLELSGQMLSLLFEDLFKTMNDEVRKTIDAILDKPSRSSRFDISQYI--VKDSITVGLE 2461
            KRLELSGQ++SLLFEDLFK+M  EV+   D +LDKP ++  FDIS  +   ++ IT+GLE
Sbjct: 378  KRLELSGQLISLLFEDLFKSMATEVKNLTDKMLDKPDKARNFDISTLLNRTQNIITLGLE 437

Query: 2460 RSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQW 2281
            R+LSTGN+++KRFRM RKGMTQV+ RLS+IG +GHMT++SPQFEKSRKVSGPRALQPSQW
Sbjct: 438  RTLSTGNFEIKRFRMERKGMTQVLQRLSFIGAMGHMTRVSPQFEKSRKVSGPRALQPSQW 497

Query: 2280 GMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIVSLCYCLGVEDLELLSGEELHMPNS 2101
            GMLCPCDTPEGE+CGLVKNLALMTHVTTDEEE P++S+CY LGVEDLELLS EELH P+S
Sbjct: 498  GMLCPCDTPEGESCGLVKNLALMTHVTTDEEESPLISMCYSLGVEDLELLSAEELHTPDS 557

Query: 2100 FLIILNGLILGKHRKPQRFANAMRKLRRAGKIGEFVSIYVNETQRCVYIASDGGRVCRPL 1921
            FL+ILNGLILGKH++P RFA A+RKLRR GKIGEFVS++V+E Q CVY+ASDGGRVCRPL
Sbjct: 558  FLVILNGLILGKHKRPLRFATAIRKLRRRGKIGEFVSVFVHEKQNCVYLASDGGRVCRPL 617

Query: 1920 VIADKGVSRIKEHHMKELKDGVRNFDSFLREGLIEYLDVNEENNALIALYESEATPETTH 1741
            VIADKG+SRIK+HHMKEL DGVR FD FLR+GL+EYLDVNEENN LIALYE +AT ETTH
Sbjct: 618  VIADKGISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNTLIALYEGDATSETTH 677

Query: 1740 IEIEPLTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNELCRMDTLIYLLVYPQ 1561
            IEIEP TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+N+L RMD+L+YLLVYPQ
Sbjct: 678  IEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQ 737

Query: 1560 RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMS 1381
            RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK S
Sbjct: 738  RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYS 797

Query: 1380 AISQKYENGTSDRIIRPQRQGYDAERMQILDDDGLAAPGEIIRPHDIYINKESPKVIRGP 1201
            A+ QK+ N TSDRI+RP R    A RM+ILDDDG+AAPGEI++P DIYINK+SP   R P
Sbjct: 798  AVIQKHSNDTSDRILRPNRAADTAGRMRILDDDGIAAPGEILKPFDIYINKQSPIDTRTP 857

Query: 1200 VTSPAG-LSDSDYKPSKQTYKGPEGETAVVDRVALCSDKNNNLCIKYMIRHTRRPEVGDK 1024
             T  AG L DS Y+ + Q++KG  GE  VVDRV LCSDK+ N+CIK++IRHTRRPE+GDK
Sbjct: 858  RTGAAGNLPDSAYRSNSQSFKGHGGE--VVDRVVLCSDKDKNMCIKFLIRHTRRPELGDK 915

Query: 1023 FSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSG 844
            FSSRHGQKGVCGTIVQQEDFPFSE+GICPDLIMNPHGFPSRMTVGKMIELLG KAGVS G
Sbjct: 916  FSSRHGQKGVCGTIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCG 975

Query: 843  RFHYGSAFGEPSGHADTVEAISETLVNHGFSYNGKDFLYSGITGMPLQAYIYMGPIYYQK 664
            RFHYGSAFGE SGHAD VEAISETLV+ GFSY+GKDF+YSGITG PLQAYI+MGPIYYQK
Sbjct: 976  RFHYGSAFGERSGHADKVEAISETLVSKGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQK 1035

Query: 663  LKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMIS 484
            LKHMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLM+S
Sbjct: 1036 LKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLS 1095

Query: 483  SDPFEVQVCRKCGLLGYYNYKLKKGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPR 304
            SDPFEVQVC  CGLLGYYN+KLK GICS CKNGD ISTMKLPYACKL+IQELQSMNIVPR
Sbjct: 1096 SDPFEVQVCTACGLLGYYNHKLKTGICSYCKNGDKISTMKLPYACKLMIQELQSMNIVPR 1155

Query: 303  LKLTAA 286
            LKL  A
Sbjct: 1156 LKLADA 1161