BLASTX nr result
ID: Catharanthus23_contig00013182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00013182
(624 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006440836.1| hypothetical protein CICLE_v10018700mg [Citr... 107 3e-21
ref|XP_006485726.1| PREDICTED: pentatricopeptide repeat-containi... 107 4e-21
ref|XP_004516865.1| PREDICTED: pentatricopeptide repeat-containi... 104 2e-20
gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-... 104 2e-20
ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago t... 104 2e-20
ref|XP_002322051.2| pentatricopeptide repeat-containing family p... 103 5e-20
ref|XP_002512026.1| pentatricopeptide repeat-containing protein,... 103 5e-20
ref|XP_002890279.1| pentatricopeptide repeat-containing protein ... 102 7e-20
emb|CAA06830.1| DYW8 protein [Arabidopsis thaliana] 102 1e-19
gb|ESW10380.1| hypothetical protein PHAVU_009G204200g [Phaseolus... 102 1e-19
ref|NP_564054.1| pentatricopeptide repeat-containing protein [Ar... 102 1e-19
dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana] 102 1e-19
ref|XP_004301089.1| PREDICTED: pentatricopeptide repeat-containi... 99 7e-19
gb|EMJ12183.1| hypothetical protein PRUPE_ppa021532mg [Prunus pe... 99 1e-18
ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-18
emb|CBI15366.3| unnamed protein product [Vitis vinifera] 99 1e-18
ref|XP_002463828.1| hypothetical protein SORBIDRAFT_01g006970 [S... 99 1e-18
ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-18
gb|EXB38821.1| Serine acetyltransferase 5 [Morus notabilis] 98 2e-18
ref|XP_006650653.1| PREDICTED: pentatricopeptide repeat-containi... 98 2e-18
>ref|XP_006440836.1| hypothetical protein CICLE_v10018700mg [Citrus clementina]
gi|557543098|gb|ESR54076.1| hypothetical protein
CICLE_v10018700mg [Citrus clementina]
Length = 980
Score = 107 bits (267), Expect = 3e-21
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
LKTTKD+TL+V KNLRIC DCHNA KL+SKV RE++VRDNKRFHHF+DG CSCGDYW
Sbjct: 923 LKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVVRDNKRFHHFRDGVCSCGDYW 980
>ref|XP_006485726.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
[Citrus sinensis]
Length = 980
Score = 107 bits (266), Expect = 4e-21
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
LKTTKD+TL+V KNLRIC DCHNA KL+SKV RE+++RDNKRFHHF+DG CSCGDYW
Sbjct: 923 LKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGDYW 980
>ref|XP_004516865.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
[Cicer arietinum]
Length = 988
Score = 104 bits (259), Expect = 2e-20
Identities = 47/58 (81%), Positives = 49/58 (84%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
L T K TL+V KNLRIC DCHNAIKLVSKV RE+IVRDNKRFHHFK GFCSCGDYW
Sbjct: 931 LNTAKGTTLRVCKNLRICVDCHNAIKLVSKVAKREIIVRDNKRFHHFKKGFCSCGDYW 988
>gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 104 bits (259), Expect = 2e-20
Identities = 43/58 (74%), Positives = 52/58 (89%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
++T++ TL+VYKNLRIC DCHNA KL+SKV RE++VRDNKRFHHFK+GFCSCGDYW
Sbjct: 911 IRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968
>ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 975
Score = 104 bits (259), Expect = 2e-20
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
L T K TL+V KNLRIC DCHNAIKLVSK+ RE+IVRDNKRFHHFK+GFCSCGDYW
Sbjct: 918 LNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
>ref|XP_002322051.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550321866|gb|EEF06178.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 837
Score = 103 bits (256), Expect = 5e-20
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
LKTTK TL++YKNLRIC DCHNA KL+SK RE++VRDNKRFHHF+DG CSC DYW
Sbjct: 780 LKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 837
>ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549206|gb|EEF50695.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 810
Score = 103 bits (256), Expect = 5e-20
Identities = 43/58 (74%), Positives = 50/58 (86%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
L TTK TL+++KNLRIC DCHNA K +S+VT RE+I+RDNKRFHHFKDG CSCGDYW
Sbjct: 753 LNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
>ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297336121|gb|EFH66538.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 953
Score = 102 bits (255), Expect = 7e-20
Identities = 43/58 (74%), Positives = 50/58 (86%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
+KT++ TL+VYKNLRIC DCHNA KL+SKV RE++VRDNKRFHHF GFCSCGDYW
Sbjct: 896 IKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953
>emb|CAA06830.1| DYW8 protein [Arabidopsis thaliana]
Length = 146
Score = 102 bits (253), Expect = 1e-19
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
+KT++ T++VYKNLRIC DCHNA KL+SKV RE++VRDNKRFHHFK+G CSCGDYW
Sbjct: 89 IKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 146
>gb|ESW10380.1| hypothetical protein PHAVU_009G204200g [Phaseolus vulgaris]
Length = 982
Score = 102 bits (253), Expect = 1e-19
Identities = 43/58 (74%), Positives = 50/58 (86%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
L T K TL++ KNLRIC DCHNAIKLVSKV R+++VRDNKRFHHFK+GFC+CGDYW
Sbjct: 925 LNTAKGTTLRICKNLRICVDCHNAIKLVSKVVERDIVVRDNKRFHHFKNGFCTCGDYW 982
>ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g18485 gi|332191599|gb|AEE29720.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 102 bits (253), Expect = 1e-19
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
+KT++ T++VYKNLRIC DCHNA KL+SKV RE++VRDNKRFHHFK+G CSCGDYW
Sbjct: 913 IKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
>dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 102 bits (253), Expect = 1e-19
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
+KT++ T++VYKNLRIC DCHNA KL+SKV RE++VRDNKRFHHFK+G CSCGDYW
Sbjct: 663 IKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720
>ref|XP_004301089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
[Fragaria vesca subsp. vesca]
Length = 957
Score = 99.4 bits (246), Expect = 7e-19
Identities = 43/58 (74%), Positives = 47/58 (81%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
LK K T++V KNLRIC DCHNA KL+SK RE+IVRDNKRFHHFKDG CSCGDYW
Sbjct: 900 LKMNKGATVRVCKNLRICLDCHNAAKLISKAVEREIIVRDNKRFHHFKDGLCSCGDYW 957
>gb|EMJ12183.1| hypothetical protein PRUPE_ppa021532mg [Prunus persica]
Length = 840
Score = 99.0 bits (245), Expect = 1e-18
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
LK +K TL++ KNLRIC DCHNA KL+SKV RE++VRDNKRFHHFK G CSCGDYW
Sbjct: 783 LKMSKGATLRICKNLRICVDCHNAAKLISKVVEREIVVRDNKRFHHFKHGLCSCGDYW 840
>ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
[Glycine max]
Length = 975
Score = 99.0 bits (245), Expect = 1e-18
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
L T K TL+V KNLRIC DCHNAIKLVSKV R++IVRDNKRFHHFK+G C+CGD+W
Sbjct: 918 LNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975
>emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 98.6 bits (244), Expect = 1e-18
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
L T K + ++VYKNLRIC DCHNA K +SKV R+++VRDNKRFHHF+DG CSCGDYW
Sbjct: 726 LNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
>ref|XP_002463828.1| hypothetical protein SORBIDRAFT_01g006970 [Sorghum bicolor]
gi|241917682|gb|EER90826.1| hypothetical protein
SORBIDRAFT_01g006970 [Sorghum bicolor]
Length = 304
Score = 98.6 bits (244), Expect = 1e-18
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
+ T+ L+V KNLRIC DCHNA+KL++KVT RE++VRDNKRFHHFKDG CSCGDYW
Sbjct: 247 VSTSPGTPLRVMKNLRICGDCHNAVKLIAKVTGREIVVRDNKRFHHFKDGACSCGDYW 304
>ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 98.6 bits (244), Expect = 1e-18
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
L T K + ++VYKNLRIC DCHNA K +SKV R+++VRDNKRFHHF+DG CSCGDYW
Sbjct: 824 LNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
>gb|EXB38821.1| Serine acetyltransferase 5 [Morus notabilis]
Length = 819
Score = 97.8 bits (242), Expect = 2e-18
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
+ T TL++ KNLRIC DCHNAIK++SK+ RE+IVRDNKRFHHFKDG CSCGDYW
Sbjct: 762 ISTPPRTTLRIMKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 819
>ref|XP_006650653.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Oryza brachyantha]
Length = 297
Score = 97.8 bits (242), Expect = 2e-18
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = +2
Query: 5 LKTTKDVTLKVYKNLRICQDCHNAIKLVSKVTFREMIVRDNKRFHHFKDGFCSCGDYW 178
+ T L+V KNLRIC DCHNA+KL++KVT RE++VRDNKRFHHFKDG CSCGDYW
Sbjct: 240 VSTPPGTPLRVIKNLRICGDCHNAVKLIAKVTGREIVVRDNKRFHHFKDGACSCGDYW 297