BLASTX nr result
ID: Catharanthus23_contig00013068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00013068
(3468 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006388111.1| hypothetical protein POPTR_0333s00200g, part... 172 9e-62
ref|XP_006582542.1| PREDICTED: uncharacterized protein LOC102668... 184 7e-59
ref|XP_006574288.1| PREDICTED: uncharacterized protein LOC102661... 182 1e-46
ref|XP_006590131.1| PREDICTED: uncharacterized protein LOC102665... 179 6e-45
ref|XP_002331746.1| predicted protein [Populus trichocarpa] 94 4e-44
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 121 7e-44
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 136 8e-44
ref|XP_006595271.1| PREDICTED: uncharacterized protein LOC100781... 127 9e-43
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 118 1e-42
ref|XP_006598323.1| PREDICTED: uncharacterized protein LOC102660... 114 3e-41
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 94 2e-40
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 89 5e-39
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 111 5e-38
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 111 5e-38
emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulga... 96 7e-36
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 89 1e-35
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga... 94 3e-34
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga... 98 6e-34
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi... 103 4e-33
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 115 1e-32
>ref|XP_006388111.1| hypothetical protein POPTR_0333s00200g, partial [Populus trichocarpa]
gi|550309503|gb|ERP47025.1| hypothetical protein
POPTR_0333s00200g, partial [Populus trichocarpa]
Length = 781
Score = 172 bits (435), Expect(2) = 9e-62
Identities = 135/484 (27%), Positives = 213/484 (44%), Gaps = 32/484 (6%)
Frame = -2
Query: 2420 IGEPMCADAMTARM*RISYARVLAKVDIAKELITEVTIKLSQWEMRSQYVLYENLPKFCS 2241
+G+P+ +D +T+ M R+SYARVL +V++ +L KL ++ +Q V+YE LPKFC
Sbjct: 314 LGKPLQSDRLTSSMSRLSYARVLVEVNLMDDLPPSFQFKLPNGDILTQSVVYETLPKFCK 373
Query: 2240 LCHVIGHS*EMCKKKETTHVQGKEK*IASPQTSNNLKAEGGNKIENNPTVPEQWQGNKGA 2061
C V+ H TT +A P ++N ++ ++ + P+ P +KG+
Sbjct: 374 HCKVLNH---------TT--------VACPSMTSNHSSDAEHRTRSKPSKPNNAIRHKGS 416
Query: 2060 TDSGSESIPDLGGNQKQNGSNKIWTRGKIIVSRQTT*SQILDRIRANSTRMIVDKAKKCK 1881
S +++ L + +GK SR S R S+ DK C
Sbjct: 417 GQSAQQTLDPLQAEVEAVTGGWEVVQGKKSNSRHKATSMTAAPQRVTSSNK--DKEVACS 474
Query: 1880 RLHRLV-----------ENLQLGNIQRRFKRGTKG*SSVVYQFQLIKDRQDSIQR*GKDG 1734
+ V E+L N + G S+VV LI+ ++ S + G
Sbjct: 475 NKGKEVACPADVRVRGDESLTHPNTSNEGRTG----STVV----LIRTKEQSCE-----G 521
Query: 1733 NG*G*TSIVGEE-------------EGIITSHLFKMKIGWWNIR------GFAKALKHIE 1611
G + GE+ ++ + K G R G LK E
Sbjct: 522 TSAGCSVRTGEKVCNEATQKAAPPASPVVVTRSSTRKSGGSGRRPPTSSAGLNSPLKQHE 581
Query: 1610 VYRFLKAKNIVVFXXXXXXXXXXXLFDIMAWKFKEWKVSHNFGEHGAGRIVILWKPLLVS 1431
V +K + V + + ++ K W N RIV+ W P V
Sbjct: 582 VVTLMKKHKLDVCGLLETKLHSSKVSSMHKFRMKHWNFLTNATAASNARIVVFWNPSTVK 641
Query: 1430 VHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIAGRRPLWDSLIRFGTSINLPWLVVG 1251
V + + + Q + + ++ + +F V+FVYG ++I RR LW +L + N PWLV+G
Sbjct: 642 VDLLDCSAQGLHVIINSLVLQLSFTVTFVYGYNTIVARRSLWANLRAWQP--NCPWLVMG 699
Query: 1250 DFDIVLK--DRLRQTQVSSYEVWDFLNCCVDLGLTDVNYSGSHYTRSNGYTWSKIDKAMC 1077
DF+ VL D+ VS+YE DF +CC DLGL D+N++G H+T +NG WSKIDK +
Sbjct: 700 DFNSVLSQTDKHNGEPVSTYETSDFRDCCTDLGLVDLNFTGCHFTWNNGRVWSKIDKVLV 759
Query: 1076 NQQW 1065
N W
Sbjct: 760 NSSW 763
Score = 95.5 bits (236), Expect(2) = 9e-62
Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
Frame = -3
Query: 2773 DEVSDLVATMGYALVGYVAGGFPGLDAIAKM-RNTWKTPHKFQIRRSGWLVFKFDSEVDR 2597
+++ D A L+GYVAG +PG A+ + +TW I SGWL++KF + D+
Sbjct: 194 EDLDDHYAVWKTYLIGYVAGKYPGFKALNNIISSTWHCNATLTIHASGWLIYKFSNVDDK 253
Query: 2596 QKISDGG-HMIYGRLLVLKNMPPLFEFGACINTMLPVWVTLPGLPIDLWNERVLAKICS 2423
+ GG +++YGR L+L+ MP F+F + T +PVW+ LP LP+ W+ R L+KI S
Sbjct: 254 MVVLGGGPYLVYGRPLLLRPMPEFFDFSSAEMTRVPVWIKLPNLPLSCWSPRCLSKIAS 312
>ref|XP_006582542.1| PREDICTED: uncharacterized protein LOC102668030 [Glycine max]
Length = 411
Score = 184 bits (466), Expect(2) = 7e-59
Identities = 100/253 (39%), Positives = 138/253 (54%), Gaps = 2/253 (0%)
Frame = -2
Query: 1667 MKIGWWNIRGFAKALKHIEVYRFLKAKNIVVFXXXXXXXXXXXLFDIMAWKFKEWKVSHN 1488
M I WNIRGF LKH + FL+ K I V + +IM KF +W +HN
Sbjct: 1 MIIASWNIRGFNLPLKHHAMQSFLRCKEINVMVVLETKLNKASVEEIMRRKFGDWHFTHN 60
Query: 1487 FGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIAGRRPL 1308
F H A RI+ILWK + + V E+ Q I ++ C + K F VSF+YGLHSI RR L
Sbjct: 61 FTSHNASRILILWKQDKIHLSVLESNAQLIHCAIDCKTTAKRFQVSFIYGLHSIMARRSL 120
Query: 1307 WDSLIRFGTSINLPWLVVGDFDIVLK--DRLRQTQVSSYEVWDFLNCCVDLGLTDVNYSG 1134
W +L ++N PWL++GDF+ ++ DR + ++YE+ DF++C DLGL +N G
Sbjct: 121 WINLNSINANMNCPWLLIGDFNSIMSPTDRFNGAEPNAYELQDFVDCYSDLGLGSINTHG 180
Query: 1133 SHYTRSNGYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDTLFDTPNRPRTC 954
YT +NG WSK+D+A+CNQ W + ++ E + IS H P V T R +
Sbjct: 181 PLYTWTNGRVWSKLDRALCNQAWFNSFGNSACEVMEFISISDHTPLVVTTELVVPRGNSP 240
Query: 953 FMFFNMWADHDRF 915
F F N DH F
Sbjct: 241 FKFNNAIMDHPNF 253
Score = 73.9 bits (180), Expect(2) = 7e-59
Identities = 43/134 (32%), Positives = 67/134 (50%)
Frame = -3
Query: 910 LVKNGWNVQILWACQYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELKQQQNLLHD 731
+V + W I +++C+ L +++F +IS+R E A E N L
Sbjct: 256 IVADSWKQNIHGYSMFKVCKKLKALKAPLKNLFKQEFRNISNRVELAEAEYNSVLNSLKQ 315
Query: 730 NPMDHLLQESVKQLQQKALFHIEAEMKLCAQKLKYDFLIKGDKATKLFHSLIKRNAKKNF 551
NP D L + + + + +AE AQ +K +L++ DK +K FH+LIKRN F
Sbjct: 316 NPQDPSLLALANRTRGQTIMLRKAESMKFAQLIKNKYLLQADKCSKFFHALIKRNRHSRF 375
Query: 550 IASITREDGSLTNS 509
IA+I EDG T+S
Sbjct: 376 IAAIRLEDGHNTSS 389
>ref|XP_006574288.1| PREDICTED: uncharacterized protein LOC102661053 [Glycine max]
Length = 331
Score = 182 bits (462), Expect(2) = 1e-46
Identities = 100/253 (39%), Positives = 135/253 (53%), Gaps = 2/253 (0%)
Frame = -2
Query: 1667 MKIGWWNIRGFAKALKHIEVYRFLKAKNIVVFXXXXXXXXXXXLFDIMAWKFKEWKVSHN 1488
M I WNIRGF LKH + FL+ K I V + +IM KF +W +HN
Sbjct: 1 MIIASWNIRGFNLPLKHHAMQNFLRCKEINVMAVLETKLNKASVEEIMRRKFSDWHFTHN 60
Query: 1487 FGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIAGRRPL 1308
F H AGRI ILWK + V E+ Q I ++ C + K VSF+Y LHSI RR L
Sbjct: 61 FTSHNAGRIFILWKQDKIHFSVLESNAQLIHCAINCKTNSKRLQVSFIYDLHSIMARRSL 120
Query: 1307 WDSLIRFGTSINLPWLVVGDFDIVLK--DRLRQTQVSSYEVWDFLNCCVDLGLTDVNYSG 1134
W +L ++N PWL++GDF+ +L DR + ++YE+ DF++C DLGL +N G
Sbjct: 121 WMNLNSINANMNCPWLLIGDFNSILSPTDRFNGAEPNAYELQDFVDCYSDLGLGSINTHG 180
Query: 1133 SHYTRSNGYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDTLFDTPNRPRTC 954
YT +NG WSK+D+A+CNQ W + ++ E + IS H P V T R +
Sbjct: 181 PLYTWTNGRVWSKLDRALCNQAWFNSFGNSACEVMEFISISDHTPLVVTTELVVPRGNSP 240
Query: 953 FMFFNMWADHDRF 915
F F N DH F
Sbjct: 241 FKFNNAIVDHPNF 253
Score = 34.3 bits (77), Expect(2) = 1e-46
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -3
Query: 910 LVKNGWNVQILWACQYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELKQQQNLLHD 731
+V +GW I +++C+ L +++F++IS+R + A E N L
Sbjct: 256 IVADGWKQNIHGCSMFKVCKKLKALKAPLKNLFKQEFSNISNRVKLAEAEYNSVLNSLKQ 315
Query: 730 NPMD 719
NP D
Sbjct: 316 NPQD 319
>ref|XP_006590131.1| PREDICTED: uncharacterized protein LOC102665788 [Glycine max]
Length = 317
Score = 179 bits (454), Expect(2) = 6e-45
Identities = 96/253 (37%), Positives = 137/253 (54%), Gaps = 2/253 (0%)
Frame = -2
Query: 1667 MKIGWWNIRGFAKALKHIEVYRFLKAKNIVVFXXXXXXXXXXXLFDIMAWKFKEWKVSHN 1488
M I WNIRGF LKH + FL+ K + V + +IM KF +W +HN
Sbjct: 1 MIIASWNIRGFNLPLKHHAMQSFLRCKEVNVMVVLETKLNKVSVKEIMRRKFGDWHFTHN 60
Query: 1487 FGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIAGRRPL 1308
F + A I+ILWK + + + E+ I ++ C + K F VSF+YGLHSI RR L
Sbjct: 61 FASYNADIILILWKQDKIHLSILESNAHLIHCAIDCKTTAKRFQVSFIYGLHSIVARRSL 120
Query: 1307 WDSLIRFGTSINLPWLVVGDFDIVLK--DRLRQTQVSSYEVWDFLNCCVDLGLTDVNYSG 1134
W +L ++N PWL++GDF+ +L DR + ++YE+ DF++CC DLGL ++N G
Sbjct: 121 WINLNSINANMNYPWLLIGDFNSILSPTDRFNGAEPNAYELQDFVDCCSDLGLGNINSHG 180
Query: 1133 SHYTRSNGYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDTLFDTPNRPRTC 954
YT +NG WSK+D+A+CNQ W + ++ E + IS H V T R +
Sbjct: 181 PLYTWTNGRVWSKLDRALCNQAWFNSFGNSAYEVMEFISISDHTLLVVTTELVVPRGNSP 240
Query: 953 FMFFNMWADHDRF 915
F F N DH F
Sbjct: 241 FKFNNAIVDHPNF 253
Score = 32.0 bits (71), Expect(2) = 6e-45
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -3
Query: 916 SSLVKNGWNVQILWACQYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELKQQQNLL 737
S +V +GW I +++C+ L +++F +IS R E A E N L
Sbjct: 254 SRIVADGWKQNIHGYSMFKVCKKLKALKAPLKNLFKQEFNNISHRVELAEAEYNSVLNSL 313
Query: 736 HDNP 725
NP
Sbjct: 314 KQNP 317
>ref|XP_002331746.1| predicted protein [Populus trichocarpa]
Length = 503
Score = 94.0 bits (232), Expect(3) = 4e-44
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Frame = -2
Query: 1511 KEWKVSHNFGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLH 1332
+ W +N+ GRI + W V V+V + Q I SVT + + +F S +YG +
Sbjct: 37 RSWSFLYNYDFSCRGRIWVCWNADTVKVNVFGMSDQAIHVSVTILATNISFNTSIIYGDN 96
Query: 1331 SIAGRRPLWDSLI-RFGTSINLPWLVVGDFDIVLKDRLRQTQVSSYEVW----DFLNCCV 1167
+ + R LW ++ R + PW+++GDF+ + R + ++ W D L+ C+
Sbjct: 97 NASLREALWSDIVSRSDGWESTPWILMGDFNAI---RNQSHRLGGSTTWAGTMDRLDTCI 153
Query: 1166 -DLGLTDVNYSGSHYTRSN----GYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHL 1002
+ + D+ YSG HYT SN K+D+ + N++W LN + FL P IS H
Sbjct: 154 REAKVDDLRYSGMHYTWSNQCPENLIMRKLDRVLVNEKWNLNFPLSEVRFL-PSGISDHS 212
Query: 1001 PRVDTLFDTPNRPRTCFMFFNMWADHD 921
P V + + F FF+MW D +
Sbjct: 213 PMVVKVIGNDQNIKKPFRFFDMWMDQN 239
Score = 77.4 bits (189), Expect(3) = 4e-44
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Frame = -2
Query: 503 VREEYLKFYVGLVGTKQETHEFDKMVMPK---------QADFLVADFSKKEIKPTLFNIG 351
V+ E + ++ ++G Q ++ VM Q L ++KEIK +F++
Sbjct: 368 VKSEVIAYFHRVLGVDQMPRVLNEEVMESAINLKLSSTQQHVLAQVVTRKEIKHAMFSLK 427
Query: 350 NEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGKLLKQAHHCVISLIPKNEQGTSV 171
N K+ G D + + FK+ W+IV +D+ +A++ F ++LK+ + ISLIPK T +
Sbjct: 428 NNKAPGLDGFNAGFFKRMWHIVGEDVINAVRSLFQTRRMLKEMNATSISLIPKVANPTRL 487
Query: 170 GDFTPISCCN 141
DF PISCCN
Sbjct: 488 TDFRPISCCN 497
Score = 57.8 bits (138), Expect(3) = 4e-44
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Frame = -3
Query: 895 WNVQILWAC-QYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELKQQQNLLHDNPMD 719
W Q C Y+LC N F++IS R + A+ E+ + Q LH +
Sbjct: 235 WMDQNSGGCPMYQLCCNLKKLKQELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHEN 294
Query: 718 HLLQESVKQLQQKALFHIEAEMKLCAQKLKYDFLIKGDKATKLFHSLIKRNAKKNFIASI 539
+L + + K + AE QK + +L GD+ T FH + +N + S+
Sbjct: 295 PILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSL 354
Query: 538 TREDGSLTNSMKYVKN 491
TREDG + + VK+
Sbjct: 355 TREDGEVVEGHEAVKS 370
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 121 bits (304), Expect(3) = 7e-44
Identities = 60/140 (42%), Positives = 90/140 (64%)
Frame = -2
Query: 422 PKQADFLVADFSKKEIKPTLFNIGNEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTF 243
P + D L A S KEI+ LF++ N+KS GPD YTS +K+AW+I+ + A++ FF
Sbjct: 858 PAEKDMLTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEK 917
Query: 242 GKLLKQAHHCVISLIPKNEQGTSVGDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQ 63
G L K + +++LIPK + + D+ PISCCN+ YKVI+K++A+R+ + I Q
Sbjct: 918 GFLPKGVNTTILALIPKKLEAKEMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQ 977
Query: 62 SAFVKGRSMLENFHLAQEIL 3
SAFVK R ++EN LA E++
Sbjct: 978 SAFVKDRLLIENLLLATELV 997
Score = 66.6 bits (161), Expect(3) = 7e-44
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Frame = -2
Query: 1514 FKEWKVSHNFGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGL 1335
FK+W + N+ + GR+ ++W+ + ++ Q I SV + F+ SFVY
Sbjct: 467 FKDWSMLTNYEFNRRGRLWVVWRENVRFTPFYKS-DQLITCSVKLESQEEEFFYSFVYAS 525
Query: 1334 HSIAGRRPLWDSLIRFGTSINL---PWLVVGDFDIVLK----DRLRQTQVSSYEVWDFLN 1176
+ R+ LW+ L S + PW++ GDF+ +L R+ + + DF +
Sbjct: 526 NFAEERKILWNDLRDHMDSPIIRDKPWIIFGDFNEILDMDEHSRMEDHPAVTSGMRDFQS 585
Query: 1175 CCVDLGLTDVNYSGSHYT----RSNGYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISH 1008
+D+ G +T R N W K+D+ M N+ W + + F A GC H
Sbjct: 586 LVNYCSFSDLASHGPLFTWCNKRDNDPIWKKLDRVMVNEAWKMVYPQSYNVFEAGGCSDH 645
Query: 1007 HLPRVDTLFDTPNRPR--TCFMFFNMWADHDRFQ 912
R++ ++ + R F F N AD + F+
Sbjct: 646 LRCRINLNMNSGAQVRGNKPFKFVNAVADMEEFK 679
Score = 40.0 bits (92), Expect(3) = 7e-44
Identities = 37/145 (25%), Positives = 57/145 (39%), Gaps = 5/145 (3%)
Frame = -3
Query: 910 LVKNGWN----VQILWACQYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELKQQQN 743
LV+N W + + + +R + L ++ ++ R A L Q Q
Sbjct: 681 LVENFWRETEPIHMSTSSLFRFTKKLKALKPKLRGLAKEKMGNLVKRTREAYLSLCQAQQ 740
Query: 742 LLHDNPMDHLLQ-ESVKQLQQKALFHIEAEMKLCAQKLKYDFLIKGDKATKLFHSLIKRN 566
NP ++ ES ++ + IE K Q K +L GDK K FH
Sbjct: 741 SNSQNPSQRAMEIESEAYVRWDRIASIEE--KYLKQVSKLHWLKVGDKNNKTFHRAATAR 798
Query: 565 AKKNFIASITREDGSLTNSMKYVKN 491
A +N I I +EDGS + +KN
Sbjct: 799 AAQNSIREIQKEDGSTATTKDDIKN 823
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 130 bits (327), Expect(2) = 8e-44
Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Frame = -2
Query: 1424 VQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIAGRRPLWDSLIRFGTSINLPWLVVGDF 1245
V E+ Q I ++ C + K F VSF+YGLHSI RR LW +L ++N PWL++GDF
Sbjct: 454 VLESNAQLIHCAIDCKTTAKRFQVSFIYGLHSIMARRSLWINLNSINANMNCPWLLIGDF 513
Query: 1244 DIVLK--DRLRQTQVSSYEVWDFLNCCVDLGLTDVNYSGSHYTRSNGYTWSKIDKAMCNQ 1071
+ +L DR ++++YE+ DF++C DLGL +N G YT +N WSK+D+A+CNQ
Sbjct: 514 NSILSPTDRFNGAELNAYELQDFVDCYSDLGLGSINTHGPLYTWTNSRVWSKLDRALCNQ 573
Query: 1070 QWLLNGLHAREEFLAPGCISHHLPRVDTLFDTPNRPRTCFMFFNMWADHDRF 915
W + ++ E + IS H P V T R + F F N+ DH F
Sbjct: 574 AWFNSFGNSACEVMEFISISDHTPLVVTTELVVPRGNSPFKFNNLIVDHPNF 625
Score = 77.0 bits (188), Expect(2) = 8e-44
Identities = 43/134 (32%), Positives = 69/134 (51%)
Frame = -3
Query: 910 LVKNGWNVQILWACQYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELKQQQNLLHD 731
+V +GW I +++C+ L +++F++IS+R E A E N +
Sbjct: 628 IVADGWKQNIHGCSMFKVCKKLKALKAPLKNLFKQEFSNISNRVELAEAEYNSVLNSIKQ 687
Query: 730 NPMDHLLQESVKQLQQKALFHIEAEMKLCAQKLKYDFLIKGDKATKLFHSLIKRNAKKNF 551
NP D L + + + + +AE AQ +K +L++ DK +K FH+LIKRN F
Sbjct: 688 NPQDPSLLALANRTRGQTIMLRKAESMKFAQLIKNKYLLQADKCSKFFHALIKRNKHSRF 747
Query: 550 IASITREDGSLTNS 509
IA+I EDG T+S
Sbjct: 748 IAAIRLEDGHNTSS 761
Score = 116 bits (290), Expect(2) = 3e-35
Identities = 63/149 (42%), Positives = 87/149 (58%), Gaps = 2/149 (1%)
Frame = -3
Query: 2860 SLLQDNRNPSRGMSL*-KVEDHDDVVDMETDEVSDLVATMGYALVGYVAGGFPGLDAIAK 2684
+L +DNR+PS+G + DD V +E ++ L G++L+GYVAG FPG A+
Sbjct: 137 NLFKDNRSPSKGFGMKFSPPPSDDEVLLEETDLQPLEEAWGHSLIGYVAGRFPGKKALLD 196
Query: 2683 MRNTWKTPHKFQIRRSGWLVFKFDSEVD-RQKISDGGHMIYGRLLVLKNMPPLFEFGACI 2507
W + SGWLVFKF+SE D Q +S G + I+ R L+LK MP F+FG
Sbjct: 197 CCKKWGVKFSYSAHESGWLVFKFESEDDLNQVLSAGPYFIFQRPLLLKVMPAFFDFGNEE 256
Query: 2506 NTMLPVWVTLPGLPIDLWNERVLAKICSK 2420
+ +PVWV L LP++LWN + L KI SK
Sbjct: 257 LSKIPVWVKLRNLPLELWNPQALGKILSK 285
Score = 62.8 bits (151), Expect(2) = 3e-35
Identities = 33/82 (40%), Positives = 47/82 (57%)
Frame = -2
Query: 2447 KGFGQDMLKIGEPMCADAMTARM*RISYARVLAKVDIAKELITEVTIKLSQWEMRSQYVL 2268
+ G+ + KIG P+ +D +TA IS+AR L +VD + ELI EV +L + Q +
Sbjct: 277 QALGKILSKIGSPIRSDHLTASKGSISFARALVEVDASLELIDEVRFRLPTGKTFVQKIE 336
Query: 2267 YENLPKFCSLCHVIGHS*EMCK 2202
YEN P FC+ C + GH CK
Sbjct: 337 YENRPSFCTHCKMTGHRLTNCK 358
Score = 136 bits (343), Expect = 6e-29
Identities = 62/134 (46%), Positives = 92/134 (68%)
Frame = -2
Query: 404 LVADFSKKEIKPTLFNIGNEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGKLLKQ 225
L+ SK+++ + + N K+ GPD + FKKAWNIV DD+ A+ EFFT GK+LKQ
Sbjct: 805 LLCPTSKQKVWNIISVMANNKAPGPDGFNVLFFKKAWNIVGDDIFAAVNEFFTTGKILKQ 864
Query: 224 AHHCVISLIPKNEQGTSVGDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQSAFVKG 45
+H +I LIPK++Q + V F PISCCN+ YK+++K+LA+R+ + +I + Q+AF+K
Sbjct: 865 LNHAIIVLIPKHDQASQVNHFRPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKN 924
Query: 44 RSMLENFHLAQEIL 3
R M++N L QEIL
Sbjct: 925 RKMMDNIFLVQEIL 938
>ref|XP_006595271.1| PREDICTED: uncharacterized protein LOC100781932 [Glycine max]
Length = 952
Score = 127 bits (318), Expect(2) = 9e-43
Identities = 66/172 (38%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
Frame = -2
Query: 1424 VQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIAGRRPLWDSLIRFGTSINLPWLVVGDF 1245
V E+ + I ++ C + K F VSF+YGLHSI R+ LW ++ ++N WL++GDF
Sbjct: 529 VFESNAKLIHCAIDCKTTAKRFQVSFIYGLHSIVARKSLWINMNSINANMNCLWLLIGDF 588
Query: 1244 DIVLK--DRLRQTQVSSYEVWDFLNCCVDLGLTDVNYSGSHYTRSNGYTWSKIDKAMCNQ 1071
+ +L DR + ++YE+ DF++CC DLGL +N G YT +NG WSK+D+A+CNQ
Sbjct: 589 NSILSPTDRFNGAEPNAYELQDFVDCCSDLGLGSINTHGPLYTWTNGRVWSKLDRALCNQ 648
Query: 1070 QWLLNGLHAREEFLAPGCISHHLPRVDTLFDTPNRPRTCFMFFNMWADHDRF 915
W + ++ E + IS H P V T R + F F N DH F
Sbjct: 649 VWFNSFGNSACEVMEFISISDHTPLVVTTKLVVPRGNSPFKFNNAIVDHPNF 700
Score = 77.0 bits (188), Expect(2) = 9e-43
Identities = 44/136 (32%), Positives = 69/136 (50%)
Frame = -3
Query: 916 SSLVKNGWNVQILWACQYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELKQQQNLL 737
S +V +GW I +++C+ L +++F++IS+R E A E N L
Sbjct: 701 SRIVADGWKQNIHGCSMFKVCKKLKVLKASLKNLFKQEFSNISNRVELAEVEYNSVLNSL 760
Query: 736 HDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQKLKYDFLIKGDKATKLFHSLIKRNAKK 557
NP DH L + + + + + E AQ +K +L++ D +K FH+LIKRN
Sbjct: 761 KQNPQDHSLLALANRTRGQTIMFRKVESMKFAQLIKNRYLLQVDICSKFFHALIKRNRHS 820
Query: 556 NFIASITREDGSLTNS 509
FIA+I EDG T+S
Sbjct: 821 RFIAAIRLEDGHNTSS 836
Score = 75.9 bits (185), Expect = 1e-10
Identities = 32/68 (47%), Positives = 50/68 (73%)
Frame = -2
Query: 389 SKKEIKPTLFNIGNEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGKLLKQAHHCV 210
SK+E+ +F + N K+ GP+ + + FKKAWNI+ DD+ +A+ EFFT K+LKQ +H +
Sbjct: 885 SKQEVWNVIFVMDNNKAPGPNGFNALFFKKAWNIIGDDIFEAVNEFFTTRKILKQINHAI 944
Query: 209 ISLIPKNE 186
I+LIPK++
Sbjct: 945 IALIPKHD 952
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 118 bits (295), Expect(3) = 1e-42
Identities = 63/140 (45%), Positives = 87/140 (62%)
Frame = -2
Query: 422 PKQADFLVADFSKKEIKPTLFNIGNEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTF 243
P Q L + FS ++I+ LF++ KS GPD +T+ F +W+IV ++ DAI+EFF+
Sbjct: 437 PAQVCELESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSS 496
Query: 242 GKLLKQAHHCVISLIPKNEQGTSVGDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQ 63
G LLKQ + I LIPK T DF PISC N YKVI +LL DR+ + +I AQ
Sbjct: 497 GCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQ 556
Query: 62 SAFVKGRSMLENFHLAQEIL 3
SAF+ GRS+ EN LA +++
Sbjct: 557 SAFLPGRSLAENVLLATDLV 576
Score = 70.9 bits (172), Expect(3) = 1e-42
Identities = 65/253 (25%), Positives = 103/253 (40%), Gaps = 15/253 (5%)
Frame = -2
Query: 1652 WNIRGFAKALKHIEVYRFLKAKNIVVFXXXXXXXXXXXLFDIMAWKFKEWKVSHNFGEHG 1473
WNIRGF +++KA + + W N+
Sbjct: 8 WNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFVENYAFSD 67
Query: 1472 AGRIVILWKPLLVSVHVQEATQQTIQTSVTCMI----SRKTFWVSFVYGLHSIAGRRPLW 1305
G+I ++W P + V V ++ Q +TC + S VS VY + +A R+ LW
Sbjct: 68 LGKIWVMWDPSVQVVVVAKSLQM-----ITCEVLLPGSPSWIIVSVVYAANEVASRKELW 122
Query: 1304 DSLIRF---GTSINLPWLVVGDFDIVLKDRLRQTQVS---SYEVWDFLNCCVDLGLTDVN 1143
++ G + PWLV+GDF+ VL + VS + DF +C + L+D+
Sbjct: 123 IEIVNMVVSGIIGDRPWLVLGDFNQVLNPQEHSNPVSLNVDINMRDFRDCLLAAELSDLR 182
Query: 1142 YSGSHYTRSN-GYTW---SKIDKAMCNQQWLLNGLHAREEFLAPGC-ISHHLPRVDTLFD 978
Y G+ +T N +T KID+ + N W N L + S H+ L +
Sbjct: 183 YKGNTFTWWNKSHTTPVAKKIDRILVNDSW--NALFPSSLGIFGSLDFSDHVSCGVVLEE 240
Query: 977 TPNRPRTCFMFFN 939
T + + F FFN
Sbjct: 241 TSIKAKRPFKFFN 253
Score = 35.4 bits (80), Expect(3) = 1e-42
Identities = 29/142 (20%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Frame = -3
Query: 913 SLVKNGW-NVQILWACQYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELK--QQQN 743
+LV++ W + ++ + +R+ + +R +++ + R + A L Q +
Sbjct: 263 NLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRLNYSELEKRTKEAHDFLIGCQDRT 322
Query: 742 LLHDNPMDHLLQESVKQLQQKALFHI--EAEMKLCAQKLKYDFLIKGDKATKLFHSLIKR 569
L P++ + L+ + +HI AE QK + + +GD TK FH +
Sbjct: 323 LADPTPINASFE-----LEAERKWHILTAAEESFFRQKSRISWFAEGDGNTKYFHRMADA 377
Query: 568 NAKKNFIASITREDGSLTNSMK 503
N I+++ +G L +S +
Sbjct: 378 RNSSNSISALYDGNGKLVDSQE 399
>ref|XP_006598323.1| PREDICTED: uncharacterized protein LOC102660513 [Glycine max]
Length = 543
Score = 114 bits (285), Expect(3) = 3e-41
Identities = 60/176 (34%), Positives = 103/176 (58%), Gaps = 8/176 (4%)
Frame = -2
Query: 506 EVREEYLKFYVGLVGTKQETHE-FDKMVMPK-------QADFLVADFSKKEIKPTLFNIG 351
E+ +E ++FY L+G ++ + D +M K Q +L+ + +EI L +IG
Sbjct: 362 EIEDEIMRFYGDLMGREEPNLDSVDINIMRKGCQLNFDQRKYLIGRITDEEIDKALKSIG 421
Query: 350 NEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGKLLKQAHHCVISLIPKNEQGTSV 171
+ K+ G D Y + FK AW+I+ D DAI+EFF GK+ + + ++ LIPKN++
Sbjct: 422 DLKAPGIDGYGAKFFKDAWSIIKSDFTDAIREFFEKGKMYEPINTSLVILIPKNQEAKYA 481
Query: 170 GDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQSAFVKGRSMLENFHLAQEIL 3
D+ PISCC YKVI+K+L R+ + +++ ++Q+AFV G+ + + LA E++
Sbjct: 482 RDYRPISCCTTIYKVISKVLTTRLSRVIKSIVHQSQAAFVPGQKIHDQILLAYELI 537
Score = 75.1 bits (183), Expect(3) = 3e-41
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 6/202 (2%)
Frame = -2
Query: 1502 KVSHNFGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIA 1323
K N+ +H GRI + W +V + T Q I V W++ +YG + +
Sbjct: 23 KYLDNYVKHNNGRIWVYWDDNIVDIQEVNCTAQLIHCKVYDATGYFMQWLTAIYGFNYLE 82
Query: 1322 GRRPLWDSLIRFGTSINLPWLVVGDFDIVLK--DRLRQTQVSSYEVWDFLNCCVDLGLTD 1149
LW L + PW ++GDF+ VLK DR+ V E D + GL +
Sbjct: 83 QCTDLWHDLEAINKTQQGPWCLIGDFNNVLKTNDRVGGKMVCEKEYKDLRTMMDNTGLAE 142
Query: 1148 VNYSGSHYTRSN----GYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDTLF 981
++ G +YT SN +S+ID+ + N +W L+ + PG IS H
Sbjct: 143 MDSKGDYYTWSNKQSENIIYSRIDRILGNTEWFSKNLNLSLTNMTPG-ISDHAMLCLRDD 201
Query: 980 DTPNRPRTCFMFFNMWADHDRF 915
P + + F + N + D F
Sbjct: 202 SVPVKRKARFKYANCVSGMDNF 223
Score = 30.0 bits (66), Expect(3) = 3e-41
Identities = 21/106 (19%), Positives = 44/106 (41%)
Frame = -3
Query: 808 KDFAHISSRAEAARKELKQQQNLLHDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQKLK 629
K I + + AR++L Q L + ++ + + + E E ++ Q+ K
Sbjct: 260 KPLIGIKVKLQEAREKLTHAQMELTLDRLNKDKIDRTNDCTEAVIKWTEMEEQMLQQRAK 319
Query: 628 YDFLIKGDKATKLFHSLIKRNAKKNFIASITREDGSLTNSMKYVKN 491
+L GD FH+ +K + I + DG+ + K +++
Sbjct: 320 IRWLRLGDGNNAYFHASLKAKYNQTSIKKLYMNDGNFVTTQKEIED 365
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 94.4 bits (233), Expect(3) = 2e-40
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 8/176 (4%)
Frame = -2
Query: 506 EVREEYLKFYVGLVGTKQETHE-FDKMVMPKQADF-------LVADFSKKEIKPTLFNIG 351
E++ E FY L+GT E D V+ A LV + +EI L +I
Sbjct: 395 EIQNEICNFYRRLLGTSSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADID 454
Query: 350 NEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGKLLKQAHHCVISLIPKNEQGTSV 171
+ K+ G D + S FKK+W ++ ++ + I +FF G + K + ++LIPK ++
Sbjct: 455 DTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHA 514
Query: 170 GDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQSAFVKGRSMLENFHLAQEIL 3
D+ PI+CC+ YK+I+K+L R+ ++ ++D AQ+ F+ R + +N LA E++
Sbjct: 515 KDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELI 570
Score = 92.4 bits (228), Expect(3) = 2e-40
Identities = 73/258 (28%), Positives = 111/258 (43%), Gaps = 7/258 (2%)
Frame = -2
Query: 1667 MKIGWWNIRGFAKALKHIEVYRFLKAKNIVVFXXXXXXXXXXXLFDIMAWKFKEWKVSHN 1488
MKI WN+RG +K EV FL ++ I + I W +N
Sbjct: 1 MKITTWNVRGLNDPIKVKEVKHFLHSQKISLCSLFETRVRQQNSGKIQKKFGNRWSWINN 60
Query: 1487 FGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIAGRRPL 1308
+ GRI + W V+++V T+Q I V F ++ VYGLH+IA R+ L
Sbjct: 61 YACSPRGRIWVGWLNNDVNINVLSVTEQVITMEVKNSYGLNMFKMAAVYGLHTIADRKVL 120
Query: 1307 WDSLIRFGTSINLPWLVVGDFDIV--LKDRLRQTQVSSYEVWDFLNCCVDLGLTDVNYSG 1134
W+ L F + + P +++GD++ V +DRL VS E D + + L + +G
Sbjct: 121 WEELYNFVSVCHEPCILIGDYNAVYSAQDRLNGNDVSEAETSDLRSFVLKAQLLEAPTTG 180
Query: 1133 SHYTRSN-----GYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDTLFDTPN 969
Y+ +N S+IDK+ N W+ E+ G IS H P + L +
Sbjct: 181 LFYSWNNKSIGADRISSRIDKSFVNVAWINQYPDVVVEYREAG-ISDHSPLIFNLATQHD 239
Query: 968 RPRTCFMFFNMWADHDRF 915
F F N AD + F
Sbjct: 240 EGGRPFKFLNFLADQNGF 257
Score = 30.0 bits (66), Expect(3) = 2e-40
Identities = 25/106 (23%), Positives = 43/106 (40%)
Frame = -3
Query: 808 KDFAHISSRAEAARKELKQQQNLLHDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQKLK 629
K F+ + E R++L Q L + + L QE K L + + + QK +
Sbjct: 294 KKFSKAHCQVEELRRKLAAVQALPEVSQVSEL-QEEEKDLIAQLRKWSTIDESILKQKSR 352
Query: 628 YDFLIKGDKATKLFHSLIKRNAKKNFIASITREDGSLTNSMKYVKN 491
+L GD +K F + IK +N I + + G ++N
Sbjct: 353 IQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQN 398
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 89.0 bits (219), Expect(3) = 5e-39
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Frame = -2
Query: 509 NEVREEYLKFYVGLVGTKQE-----THEFDKMVMPKQADFLVADF-----SKKEIKPTLF 360
++++ + +Y L+G E + E K ++P + D +A S++EI LF
Sbjct: 398 DQIKGMLIAYYSHLLGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLF 457
Query: 359 NIGNEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGKLLKQAHHCVISLIPKNEQG 180
++ K+ GPD + F +AW IV + AI+EFF G L + + I+LIPK
Sbjct: 458 SMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGA 517
Query: 179 TSVGDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQSAFVKGRSMLENFHLAQEIL 3
+ F P++CC YKVIT++++ R+ + Q F+KGR + EN LA E++
Sbjct: 518 DRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELV 576
Score = 87.4 bits (215), Expect(3) = 5e-39
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 11/262 (4%)
Frame = -2
Query: 1667 MKIGWWNIRGFAKALKHIEVYRFLKAKNIVVFXXXXXXXXXXXLFDIMAWKFKEWKVSHN 1488
MK+ WNIRG + V ++ + N++V ++A W++ N
Sbjct: 1 MKVFCWNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSN 60
Query: 1487 FGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIAGRRPL 1308
+ GRI I+W P +SV V + T Q + S+ ++F V+FVYG +S RR L
Sbjct: 61 YCCSELGRIWIVWDPS-ISVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSL 119
Query: 1307 WDSLIRFGTSINL---PWLVVGDFDIVLKD----RLRQTQVSSYEVWDFLNCCVDLGLTD 1149
W+ ++ + L PWL++GDF+ + + Q+ ++ + D C D L+D
Sbjct: 120 WEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSD 179
Query: 1148 VNYSGSHYTRSN----GYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDTLF 981
+ G +T SN K+D+A+ N +W A F PG S H P + +
Sbjct: 180 LPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPG-DSDHAPCIILID 238
Query: 980 DTPNRPRTCFMFFNMWADHDRF 915
+ P + F +F+ + H +
Sbjct: 239 NQPPPSKKSFKYFSFLSSHPSY 260
Score = 35.8 bits (81), Expect(3) = 5e-39
Identities = 27/107 (25%), Positives = 45/107 (42%)
Frame = -3
Query: 814 NRKDFAHISSRAEAARKELKQQQNLLHDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQK 635
NR F++I R + L+ Q L +P D L + +Q F E QK
Sbjct: 296 NRLRFSNIQQRTAQSLTRLEDIQVELLTSPSDTLFRREHVARKQWIFFAAALE-SFFRQK 354
Query: 634 LKYDFLIKGDKATKLFHSLIKRNAKKNFIASITREDGSLTNSMKYVK 494
+ +L +GD T+ FH + + N I + +DG ++ +K
Sbjct: 355 SRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIK 401
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 111 bits (277), Expect(3) = 5e-38
Identities = 59/138 (42%), Positives = 83/138 (60%)
Frame = -2
Query: 416 QADFLVADFSKKEIKPTLFNIGNEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGK 237
Q + L FS +I+ F++ K+SGPD Y+S FK W +V ++ +A+QEFF G+
Sbjct: 440 QINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQ 499
Query: 236 LLKQAHHCVISLIPKNEQGTSVGDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQSA 57
LLKQ + + LIPK + + DF PISC N YKVI KLL R+ + +I +QSA
Sbjct: 500 LLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSA 559
Query: 56 FVKGRSMLENFHLAQEIL 3
F+ GR + EN LA EI+
Sbjct: 560 FLPGRLLSENVLLATEIV 577
Score = 64.3 bits (155), Expect(3) = 5e-38
Identities = 56/204 (27%), Positives = 83/204 (40%), Gaps = 7/204 (3%)
Frame = -2
Query: 1505 WKVSHNFGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSI 1326
W N+ G+I +LW P V V V + Q I + S F VS VY +
Sbjct: 57 WSFVENYEFSVLGKIWVLWDP-SVKVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEE 115
Query: 1325 AGRRPLWDSLIRFGTS---INLPWLVVGDFDIVLKDRLRQTQVSSYEVWDFLNCCVDLGL 1155
R+ LW+ L++ S + W+V+GDF+ +L ++ F +C +D L
Sbjct: 116 GTRKELWNELVQLALSPVVVGRSWIVLGDFNQILNPESAINANIGRKIRAFRSCLLDSDL 175
Query: 1154 TDVNYSGSHYTRSNGYT----WSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDT 987
D+ Y GS YT N + KID+ + N W A F P H V
Sbjct: 176 YDLVYKGSSYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEV-V 234
Query: 986 LFDTPNRPRTCFMFFNMWADHDRF 915
L + + F FFN + + F
Sbjct: 235 LDPAVLKAKRPFRFFNYFLHNPDF 258
Score = 33.1 bits (74), Expect(3) = 5e-38
Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 3/142 (2%)
Frame = -3
Query: 910 LVKNGW-NVQILWACQYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELKQQQNLLH 734
L++ W + + + YR+ + +R++++ I R A + +Q +
Sbjct: 261 LIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEKRVSEAHAIVLHRQRITL 320
Query: 733 DNPMDHLLQESVKQLQQKALFHI--EAEMKLCAQKLKYDFLIKGDKATKLFHSLIKRNAK 560
NP + + +L+ + I +AE QK +L +GD T FH +
Sbjct: 321 TNPS---VVHATLELEATRKWQILAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKS 377
Query: 559 KNFIASITREDGSLTNSMKYVK 494
N I + + G + + +K
Sbjct: 378 INTINFLIDDFGERIETQQGIK 399
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 111 bits (277), Expect(3) = 5e-38
Identities = 59/138 (42%), Positives = 83/138 (60%)
Frame = -2
Query: 416 QADFLVADFSKKEIKPTLFNIGNEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGK 237
Q + L FS +I+ F++ K+SGPD Y+S FK W +V ++ +A+QEFF G+
Sbjct: 440 QINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQ 499
Query: 236 LLKQAHHCVISLIPKNEQGTSVGDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQSA 57
LLKQ + + LIPK + + DF PISC N YKVI KLL R+ + +I +QSA
Sbjct: 500 LLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSA 559
Query: 56 FVKGRSMLENFHLAQEIL 3
F+ GR + EN LA EI+
Sbjct: 560 FLPGRLLSENVLLATEIV 577
Score = 64.3 bits (155), Expect(3) = 5e-38
Identities = 56/204 (27%), Positives = 83/204 (40%), Gaps = 7/204 (3%)
Frame = -2
Query: 1505 WKVSHNFGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSI 1326
W N+ G+I +LW P V V V + Q I + S F VS VY +
Sbjct: 57 WSFVENYEFSVLGKIWVLWDP-SVKVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEE 115
Query: 1325 AGRRPLWDSLIRFGTS---INLPWLVVGDFDIVLKDRLRQTQVSSYEVWDFLNCCVDLGL 1155
R+ LW+ L++ S + W+V+GDF+ +L ++ F +C +D L
Sbjct: 116 GTRKELWNELVQLALSPVVVGRSWIVLGDFNQILNPESAINANIGRKIRAFRSCLLDSDL 175
Query: 1154 TDVNYSGSHYTRSNGYT----WSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDT 987
D+ Y GS YT N + KID+ + N W A F P H V
Sbjct: 176 YDLVYKGSSYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEV-V 234
Query: 986 LFDTPNRPRTCFMFFNMWADHDRF 915
L + + F FFN + + F
Sbjct: 235 LDPAVLKAKRPFRFFNYFLHNPDF 258
Score = 33.1 bits (74), Expect(3) = 5e-38
Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 3/142 (2%)
Frame = -3
Query: 910 LVKNGW-NVQILWACQYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELKQQQNLLH 734
L++ W + + + YR+ + +R++++ I R A + +Q +
Sbjct: 261 LIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEKRVSEAHAIVLHRQRITL 320
Query: 733 DNPMDHLLQESVKQLQQKALFHI--EAEMKLCAQKLKYDFLIKGDKATKLFHSLIKRNAK 560
NP + + +L+ + I +AE QK +L +GD T FH +
Sbjct: 321 TNPS---VVHATLELEATRKWQILAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKS 377
Query: 559 KNFIASITREDGSLTNSMKYVK 494
N I + + G + + +K
Sbjct: 378 INTINFLIDDFGERIETQQGIK 399
>emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1379
Score = 96.3 bits (238), Expect(3) = 7e-36
Identities = 57/177 (32%), Positives = 100/177 (56%), Gaps = 6/177 (3%)
Frame = -2
Query: 515 KFNEVREEYLKFYVGLVG---TKQETHE---FDKMVMPKQADFLVADFSKKEIKPTLFNI 354
K N+++EE + F+ + T++ T E F+++ QAD L+ FS +EI + +
Sbjct: 382 KPNQIKEEAVTFFKEIFTEEFTERPTLEGLQFNQLSQ-NQADSLIQPFSDEEIDYAVNSC 440
Query: 353 GNEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGKLLKQAHHCVISLIPKNEQGTS 174
++K+ GPD + K AW + +D+ ++EF+ KL K ++ I+LIPK + +
Sbjct: 441 ASDKAPGPDGFNFKFIKNAWETIKEDVYTLVREFWATSKLPKGSNSTFITLIPKIDNPEN 500
Query: 173 VGDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQSAFVKGRSMLENFHLAQEIL 3
DF PIS YK+I KL+A R+ + +LI QS++V+GR +L+ +A E++
Sbjct: 501 FKDFRPISMVGCVYKIIAKLMAKRIQRVMSSLIGPLQSSYVEGRQILDGALVASEVI 557
Score = 58.9 bits (141), Expect(3) = 7e-36
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 7/252 (2%)
Frame = -2
Query: 1667 MKIGWWNIRGFAKALKHIEVYRFLKAKNIVVFXXXXXXXXXXXLFDIMA--WKFK--EWK 1500
M + WNIRG +K + + ++ K+ F +I+ WK + EW
Sbjct: 1 MSVLSWNIRGLTARVKRSAIRKLIQ-KHTPDFVFVQETKMEGISLEIVKTMWKSQDVEWT 59
Query: 1499 VSHNFGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSF--VYGLHSI 1326
+ G G ++ +W S+ Q I +++ SR F VY +++
Sbjct: 60 WYPSVGNSGG--LISMWNKSAFSMKSSSVNQHWI--AISGSFSRINFECILFNVYNPNTV 115
Query: 1325 AGRRPLWDSLIRFGTSINLPWLVVGDFDIVLK-DRLRQTQVSSYEVWDFLNCCVDLGLTD 1149
R +W+ ++ F + LP L++GDF+ L+ D S+ +F N + L +
Sbjct: 116 GARASVWEEIVTFHKTNPLPSLLIGDFNETLEPDDRGSLLFSNIGTDNFKNFLQVMELLE 175
Query: 1148 VNYSGSHYTRSNGYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDTLFDTPN 969
V+ S +T G + S +D+ + N +W+ R L G +S H P + T T N
Sbjct: 176 VSPSNKGFTWFRGRSKSVLDRLLLNPEWINEFPSMRLSLLQRG-LSDHCPLL-TNIHTQN 233
Query: 968 RPRTCFMFFNMW 933
F F N W
Sbjct: 234 WGPKPFRFQNCW 245
Score = 46.2 bits (108), Expect(3) = 7e-36
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = -3
Query: 814 NRKDFAHISSRAEAARKELKQQQNLLHDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQK 635
NR +F HI + + E+++ + ++ +D E K+ Q ++ + AQ
Sbjct: 282 NRDEFGHIDTNIKIMEDEIQKFDTISNERELDEQEIERRKEAQSDLWMWMKRKELYWAQN 341
Query: 634 LKYDFLIKGDKATKLFHSLIKRNAKKNFIASI 539
+ +L GD+ TK FH + ++NFIASI
Sbjct: 342 SRILWLKHGDRNTKFFHMVASNKKRRNFIASI 373
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 89.0 bits (219), Expect(3) = 1e-35
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Frame = -2
Query: 509 NEVREEYLKFYVGLVGTKQE-----THEFDKMVMPKQADFLVADF-----SKKEIKPTLF 360
++++ + +Y L+G E + E K ++P + D +A S++EI LF
Sbjct: 441 DQIKGMLIAYYSHLLGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLF 500
Query: 359 NIGNEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGKLLKQAHHCVISLIPKNEQG 180
++ K+ GPD + F +AW IV + AI+EFF G L + + I+LIPK
Sbjct: 501 SMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGA 560
Query: 179 TSVGDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQSAFVKGRSMLENFHLAQEIL 3
+ F P++CC YKVIT++++ R+ + Q F+KGR + EN LA E++
Sbjct: 561 DRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELV 619
Score = 75.9 bits (185), Expect(3) = 1e-35
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Frame = -2
Query: 1529 IMAWKFKEWKVSHNFGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVS 1350
++A W++ N+ GRI I+W P +SV V + T Q + S+ ++F V+
Sbjct: 90 VLASTLPGWRMDSNYCCSELGRIWIVWDPS-ISVLVFKRTDQIMFCSIKIPSLLQSFAVA 148
Query: 1349 FVYGLHSIAGRRPLWDSLIRFGTSINL---PWLVVGDFDIVLKD----RLRQTQVSSYEV 1191
FVYG +S RR LW+ ++ + L PWL++GDF+ + + Q+ ++ +
Sbjct: 149 FVYGRNSELDRRSLWEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGM 208
Query: 1190 WDFLNCCVDLGLTDVNYSGSHYTRSN----GYTWSKIDKAMCNQQWLLNGLHAREEFLAP 1023
D C D L+D+ G +T SN K+D+A+ N +W A F P
Sbjct: 209 EDLQCCLRDSQLSDLPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPP 268
Query: 1022 GCISHHLPRVDTLFDTPNRPRTCFMFFNMWADHDRF 915
G S H P + + + P + F +F+ + H +
Sbjct: 269 G-DSDHAPCIILIDNQPPPSKKSFKYFSFLSSHPSY 303
Score = 35.8 bits (81), Expect(3) = 1e-35
Identities = 27/107 (25%), Positives = 45/107 (42%)
Frame = -3
Query: 814 NRKDFAHISSRAEAARKELKQQQNLLHDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQK 635
NR F++I R + L+ Q L +P D L + +Q F E QK
Sbjct: 339 NRLRFSNIQQRTAQSLTRLEDIQVELLTSPSDTLFRREHVARKQWIFFAAALE-SFFRQK 397
Query: 634 LKYDFLIKGDKATKLFHSLIKRNAKKNFIASITREDGSLTNSMKYVK 494
+ +L +GD T+ FH + + N I + +DG ++ +K
Sbjct: 398 SRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIK 444
>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1383
Score = 94.0 bits (232), Expect(3) = 3e-34
Identities = 52/152 (34%), Positives = 81/152 (53%)
Frame = -2
Query: 458 KQETHEFDKMVMPKQADFLVADFSKKEIKPTLFNIGNEKSSGPDSYTSYLFKKAWNIV*D 279
K E EF K++ P Q + L FS EI + + K+ GPD + K AW ++
Sbjct: 407 KFENLEFKKLI-PSQTNMLCEPFSLDEIDAAVASCDGNKAPGPDGFNFNFIKSAWEVIKQ 465
Query: 278 DLCDAIQEFFTFGKLLKQAHHCVISLIPKNEQGTSVGDFTPISCCNIFYKVITKLLADRM 99
D+ D ++ F+ G L K + I+LIPK E S D+ PIS YK+++K+LA R+
Sbjct: 466 DVYDMVRRFWNTGYLPKGCNTAFIALIPKVESPMSFKDYRPISMVGCVYKIVSKILARRL 525
Query: 98 GSISLALIDKAQSAFVKGRSMLENFHLAQEIL 3
+ L+ QS+F+ GR +L+ +A EI+
Sbjct: 526 QRVMDHLVGTLQSSFIGGRQILDGALVAGEII 557
Score = 63.5 bits (153), Expect(3) = 3e-34
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Frame = -2
Query: 1508 EWKVSHNFGEHGAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHS 1329
EW S + G G ++ +W+ + + I + + R + +Y +
Sbjct: 57 EWLFSPSVGNSGG--LISIWEKSAFQMESSHIQRNWIAIQGSIVHPRFRCLLINIYNPCN 114
Query: 1328 IAGRRPLWDSLIRFGTSINLPWLVVGDFDIVLKDRLRQTQVSSYE-VWDFLNCCVDLGLT 1152
I GR +W+ + F P L++GDF+ VL R + +SS E V DF N LGL
Sbjct: 115 IEGRAVVWNDISEFCRINIFPTLIMGDFNEVLSSSERGSGLSSQEGVEDFRNFIQSLGLI 174
Query: 1151 DVNYSGSHYTRSNGYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDTLFDTP 972
D++ + +T +G S++D+ + W+ + + L +S H P + T
Sbjct: 175 DISSANGRFTWFHGNRKSRLDRCLVTSDWIQQYPNLSLQIL-NRTVSDHCPILAHSPATN 233
Query: 971 NRPRTCFMFFNMWADHDRF 915
P+ F F N W H F
Sbjct: 234 WGPKP-FRFLNCWVSHPNF 251
Score = 38.5 bits (88), Expect(3) = 3e-34
Identities = 23/101 (22%), Positives = 49/101 (48%)
Frame = -3
Query: 814 NRKDFAHISSRAEAARKELKQQQNLLHDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQK 635
N+ +F I ++ + ++ ++ +D + +S K +Q ++ AQ
Sbjct: 282 NKSEFGAIDTKIKELEDLIQHFDDIANDRTLSDSELDSRKSVQMDLWSWLKKREAYWAQV 341
Query: 634 LKYDFLIKGDKATKLFHSLIKRNAKKNFIASITREDGSLTN 512
+ +L +GD+ TK FH+L +KN I+SI ++ +L +
Sbjct: 342 SRSKWLKEGDRNTKFFHTLASIRRQKNSISSILIDNTNLVD 382
>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1380
Score = 98.2 bits (243), Expect(3) = 6e-34
Identities = 48/147 (32%), Positives = 87/147 (59%)
Frame = -2
Query: 443 EFDKMVMPKQADFLVADFSKKEIKPTLFNIGNEKSSGPDSYTSYLFKKAWNIV*DDLCDA 264
+F + + AD L+A FS +EI + + ++K+ GPD + KKAW+++ +++ +
Sbjct: 412 DFKHLTEAQSAD-LIAPFSHEEIDKAVASCSSDKAPGPDGFNFTFIKKAWDVIKEEIYET 470
Query: 263 IQEFFTFGKLLKQAHHCVISLIPKNEQGTSVGDFTPISCCNIFYKVITKLLADRMGSISL 84
+QEF+ +L K + I+LIPK + DF PIS YK++ KLL R+ +
Sbjct: 471 VQEFWNSSRLPKGCNMAFIALIPKTDSPKGFQDFRPISMVGCVYKIVAKLLTMRLQKVMN 530
Query: 83 ALIDKAQSAFVKGRSMLENFHLAQEIL 3
+L+ AQS+F++GR +L++ +A E++
Sbjct: 531 SLVGPAQSSFIEGRHILDSALIAGELI 557
Score = 58.5 bits (140), Expect(3) = 6e-34
Identities = 57/249 (22%), Positives = 98/249 (39%), Gaps = 4/249 (1%)
Frame = -2
Query: 1652 WNIRGFAKALKHIEVYRFLKAKNIVVFXXXXXXXXXXXLFDIMA-WKFKEWKVSHNFGEH 1476
WNIRG +K + + + N + I + W E + + +
Sbjct: 7 WNIRGLGARIKRSALRKMISIHNPLFITIQETKLGEIDPKLIRSIWNSNEVAWTFSPADG 66
Query: 1475 GAGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIAGRRPLWDSL 1296
AG I+ LW ++V ++ I T + +Y S+ R +W +
Sbjct: 67 NAGGILTLWSKTFITVSSSHVSKNWIAVRGTISHLNWDCSLISIYNPCSVEERAVVWGEI 126
Query: 1295 IRFGTSINLPWLVVGDFDIVLKDRLR-QTQVSSYEVWDFLNCCVDLGLTDVNYSGSHYTR 1119
+ F T+ LP L++GDF+ L R +S DF L LT++ + +T
Sbjct: 127 LEFWTTSKLPCLIIGDFNETLASNDRGSLAISQSGSNDFRQFVQSLQLTEIP-TTERFTW 185
Query: 1118 SNGYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRV--DTLFDTPNRPRTCFMF 945
G + SK+D+ N +WL + + L G +S H P + ++ + +P F F
Sbjct: 186 FRGNSKSKLDRCFVNPEWLTHYPTLKLSLLNRG-LSDHCPLLLNSSVRNWGPKP---FKF 241
Query: 944 FNMWADHDR 918
N W R
Sbjct: 242 QNCWLSDPR 250
Score = 38.1 bits (87), Expect(3) = 6e-34
Identities = 22/92 (23%), Positives = 42/92 (45%)
Frame = -3
Query: 814 NRKDFAHISSRAEAARKELKQQQNLLHDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQK 635
N K F +I + + E+ Q + ++ +D E K+ Q ++ + +Q+
Sbjct: 282 NEKVFGNIEANIKQLEHEINQLDKISNERDLDSFELEKKKKAQVDLWSWMKTKESYWSQQ 341
Query: 634 LKYDFLIKGDKATKLFHSLIKRNAKKNFIASI 539
+ +L +GD+ TK FH + +N I SI
Sbjct: 342 SRIKWLKQGDRNTKFFHVVASIRKHRNSITSI 373
>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
Length = 1784
Score = 103 bits (256), Expect(3) = 4e-33
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Frame = -2
Query: 515 KFNEVREEYLKFYVG---LVGTKQETHEFDKMVMPKQADFLVADFSKKEIKPTLFNIGNE 345
K ++ EY K L+ + T + V P + L ++F ++EI +F IG
Sbjct: 389 KLEDMATEYFKEVFSADPLLDQSKVTRLIQRKVSPAMNETLCSEFKEEEISNAMFQIGPL 448
Query: 344 KSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGKLLKQAHHCVISLIPKNEQGTSVGD 165
K+ GPD + + +++ W + +D+ A++ FF G + + + I LIPK EQ + D
Sbjct: 449 KAPGPDGFPARFYQRHWGFMKNDIVRAVKLFFDTGVMPEGVNDTAIVLIPKIEQPMELRD 508
Query: 164 FTPISCCNIFYKVITKLLADRMGSISLALIDKAQSAFVKGRSMLENFHLAQE 9
F PIS CN+ YKV++K L +R+ I L+ QSAFV GR + +N LA E
Sbjct: 509 FRPISLCNVIYKVVSKCLVNRLRPILDELVSPCQSAFVLGRMITDNAILAFE 560
Score = 56.2 bits (134), Expect(3) = 4e-33
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 9/189 (4%)
Frame = -2
Query: 1472 AGRIVILWKPLLVSVHVQEATQQTIQTSVTCMISRKTFWVSFVYGLHSIAGRRPLWDSLI 1293
+G + + W V V ++ ++ I V ++ + V+FVYG + R +W L
Sbjct: 65 SGGLALFWDES-VFVEIKGINERYIDAYVRLSVNDPIWHVTFVYGEPRVEHRHRMWSMLN 123
Query: 1292 RFGTSINLPWLVVGDFDIVL--KDRLRQTQVSSYEVWDFLNCCVDLGLTDVNYSGSHYTR 1119
S NLPWLV+GDF+ L + + + S ++ F + L D+ + G YT
Sbjct: 124 SIKQSSNLPWLVLGDFNETLWQFEHFSKKKRSEVQMQAFRDVLQTYELHDLGFKGLPYTY 183
Query: 1118 SN-----GYTWSKIDKAMCNQQWLLNGLHAREEFLAPGCISHHLPRVDTLFDTPNRP--R 960
N ++D+ + + W ++ E L C S+H P V N+P R
Sbjct: 184 DNKREGINNVRVRLDRVVADDGWRDMFRSSQVEHLISPC-SNHCPVVLKFCVDTNQPARR 242
Query: 959 TCFMFFNMW 933
C + W
Sbjct: 243 KCLHYEIFW 251
Score = 32.7 bits (73), Expect(3) = 4e-33
Identities = 25/99 (25%), Positives = 45/99 (45%)
Frame = -3
Query: 814 NRKDFAHISSRAEAARKELKQQQNLLHDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQK 635
+R+ ++ E RK L + L ++ D S + L+ E L Q+
Sbjct: 292 SRRKCKNVGREIEKGRKRLAE----LIESGADSRSIRSASDNLHELLYR---EEMLWLQR 344
Query: 634 LKYDFLIKGDKATKLFHSLIKRNAKKNFIASITREDGSL 518
+ ++L +GD+ T+ FHS AKKN I + +G++
Sbjct: 345 SRVNWLKEGDRNTRFFHSKAVWRAKKNRITKLKDREGTV 383
Score = 102 bits (255), Expect(2) = 2e-22
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Frame = -2
Query: 515 KFNEVREEYLKFYVG---LVGTKQETHEFDKMVMPKQADFLVADFSKKEIKPTLFNIGNE 345
K ++ EY K L+ + T + V P + L ++F ++EI +F IG
Sbjct: 1087 KLEDMATEYFKEVFSADPLLDQSKVTRLIQRKVSPAMNETLCSEFKEEEISNAMFQIGPL 1146
Query: 344 KSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTFGKLLKQAHHCVISLIPKNEQGTSVGD 165
K+ GPD + + +++ W + +D+ A++ FF G + + + I LIPK EQ + D
Sbjct: 1147 KALGPDGFPARFYQRHWGFMKNDIVRAVKLFFDTGVMPEGVNDTAIVLIPKIEQPMELRD 1206
Query: 164 FTPISCCNIFYKVITKLLADRMGSISLALIDKAQSAFVKGRSMLENFHLAQE 9
F PIS CN+ YKV++K L +R+ I L+ QSAFV GR + +N LA E
Sbjct: 1207 FRPISLCNVIYKVVSKCLVNRLRPILDELVSPCQSAFVLGRMITDNAILAFE 1258
Score = 33.1 bits (74), Expect(2) = 2e-22
Identities = 25/99 (25%), Positives = 45/99 (45%)
Frame = -3
Query: 814 NRKDFAHISSRAEAARKELKQQQNLLHDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQK 635
+R+ ++ E RK L + L ++ D S + L+ E L Q+
Sbjct: 990 SRRKCKNVGREIEKGRKRLAE----LIESGADSTSIRSASDNLHELLYR---EEMLWLQR 1042
Query: 634 LKYDFLIKGDKATKLFHSLIKRNAKKNFIASITREDGSL 518
+ ++L +GD+ T+ FHS AKKN I + +G++
Sbjct: 1043 SRVNWLKEGDRNTRFFHSKAVWRAKKNRITKLKDREGTV 1081
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 115 bits (289), Expect(3) = 1e-32
Identities = 63/140 (45%), Positives = 84/140 (60%)
Frame = -2
Query: 422 PKQADFLVADFSKKEIKPTLFNIGNEKSSGPDSYTSYLFKKAWNIV*DDLCDAIQEFFTF 243
P Q L FS ++IK F++ K+SGPD ++ F W I+ ++ +AI EFFT
Sbjct: 334 PAQQVSLDTPFSSEQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTS 393
Query: 242 GKLLKQAHHCVISLIPKNEQGTSVGDFTPISCCNIFYKVITKLLADRMGSISLALIDKAQ 63
GKLLKQ + + LIPK +S+ DF PISC N YKVI+KLL DR+ A I +Q
Sbjct: 394 GKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQ 453
Query: 62 SAFVKGRSMLENFHLAQEIL 3
SAF+ GR LEN LA E++
Sbjct: 454 SAFMPGRLFLENVLLATELV 473
Score = 44.7 bits (104), Expect(3) = 1e-32
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 10/159 (6%)
Frame = -2
Query: 1355 VSFVYGLHSIAGRRPLWDSLIRFGTS---INLPWLVVGDFDIVLKDRLRQTQVS---SYE 1194
+SFVY R+ LW+ ++ F I+ PW V+GDF+ +L T
Sbjct: 3 LSFVYASTDEVTRQILWNEIVDFSNDPCVIDKPWTVLGDFNQILHPSEHSTSDGFNVDRP 62
Query: 1193 VWDFLNCCVDLGLTDVNYSGSHYT----RSNGYTWSKIDKAMCNQQWLLNGLHAREEFLA 1026
F + LTD+++ G+ +T RS K+D+ + N +W + F
Sbjct: 63 TRIFRETILLASLTDLSFRGNTFTWWNKRSRAPVAKKLDRILVNDKWTTTFPSSLGLFGE 122
Query: 1025 PGCISHHLPRVDTLFDTPNRPRTCFMFFNMWADHDRFQS 909
P H + + +P R + F F N + F S
Sbjct: 123 PDFSDHSSCELSLMSASP-RSKKPFRFNNFLLKDENFLS 160
Score = 29.6 bits (65), Expect(3) = 1e-32
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 1/142 (0%)
Frame = -3
Query: 913 SLVKNGW-NVQILWACQYRLCRXXXXXXXXXXXLNRKDFAHISSRAEAARKELKQQQNLL 737
SL+ W + + + YR+ +R +++ I R + A L Q++L
Sbjct: 160 SLICLKWFSTSVTGSAMYRVSVKLKALKKVIRDFSRDNYSDIEKRTKEAHDALLLAQSVL 219
Query: 736 HDNPMDHLLQESVKQLQQKALFHIEAEMKLCAQKLKYDFLIKGDKATKLFHSLIKRNAKK 557
+P + Q+K EAE Q+ + ++L +GD + FH +
Sbjct: 220 LASPCPSNAAIEA-ETQRKWRILAEAEASFFYQRSRVNWLREGDMNSSYFHKMASARQSL 278
Query: 556 NFIASITREDGSLTNSMKYVKN 491
N I ++ G + ++N
Sbjct: 279 NHIHFLSDPVGDRIEGQQNLEN 300