BLASTX nr result
ID: Catharanthus23_contig00013046
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00013046
(690 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] 414 e-113
gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir... 225 9e-57
gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavan... 221 2e-55
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn... 220 3e-55
gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I... 216 5e-54
gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Men... 214 2e-53
gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subu... 213 4e-53
gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Men... 213 5e-53
pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate ... 212 1e-52
pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Ger... 198 1e-48
ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta... 197 3e-48
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis] 196 6e-48
ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyro... 194 2e-47
gb|EPS64735.1| geranyl diphosphate synthase small subunit, parti... 194 3e-47
ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Popu... 188 1e-45
ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyro... 187 2e-45
gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma... 182 7e-44
gb|EMJ15727.1| hypothetical protein PRUPE_ppa015010mg [Prunus pe... 182 9e-44
emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera] 172 9e-41
ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medic... 172 1e-40
>gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus]
Length = 299
Score = 414 bits (1064), Expect = e-113
Identities = 209/226 (92%), Positives = 209/226 (92%)
Frame = -1
Query: 678 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIP 499
MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIP
Sbjct: 1 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIP 60
Query: 498 IRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXHEN 319
IRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQ HEN
Sbjct: 61 IRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQAMAAAAAIHLVHAAAYAHEN 120
Query: 318 LPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDSNNSDRILRVIIEITQAA 139
LPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDSNNSDRILRVIIEITQAA
Sbjct: 121 LPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDSNNSDRILRVIIEITQAA 180
Query: 138 GSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGAI 1
GSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGAI
Sbjct: 181 GSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGAI 226
>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
Length = 297
Score = 225 bits (574), Expect = 9e-57
Identities = 127/230 (55%), Positives = 161/230 (70%), Gaps = 4/230 (1%)
Frame = -1
Query: 678 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSW-ANIESDIQTHLKKSI 502
MA ++ F N F SI++S T P RP + ++ ++ A IESDI+++LKK+I
Sbjct: 1 MAHGLTHF-NTKSGLFPSITKS--KTTRPSTRPVILAMTRTQTYRATIESDIESYLKKAI 57
Query: 501 PIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXHE 322
PIRAPE VFEPMH+LTFAAPRT+A ALC+AACE+VGGD HE
Sbjct: 58 PIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYTHE 117
Query: 321 NLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEIT 148
NLPLTD K IQHKF+ NIELLTGDGI+P+G EL+A+SMD NN DRILR IIE+T
Sbjct: 118 NLPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIELT 177
Query: 147 QAAGSKGIIDGQFRELDVIDSEIN-MGLIEYVCKKKEGELNACGAACGAI 1
+ GS+GI++GQ+ EL + +++N + LIEYVCKKKEG L+ACGAACGAI
Sbjct: 178 RVMGSEGIVEGQYHELGL--NQLNDLELIEYVCKKKEGTLHACGAACGAI 225
>gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavandula x intermedia]
Length = 295
Score = 221 bits (562), Expect = 2e-55
Identities = 109/185 (58%), Positives = 138/185 (74%), Gaps = 2/185 (1%)
Frame = -1
Query: 549 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 370
W++I++DI T+LKK+IPIR+PE VFEPMH+LTFAAP TTA ALC+AACE+ GG+ Q
Sbjct: 33 WSSIDADINTYLKKAIPIRSPETVFEPMHHLTFAAPTTTASALCVAACELFGGNRTQALP 92
Query: 369 XXXXXXXXXXXXXXHENLPLTDRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSM 196
H++LPLTDR RP KP IQHKFN NIELLTGDGI P+GFELLA S+
Sbjct: 93 AASAIHLIHAAAYTHDHLPLTDRPRPESKPDIQHKFNPNIELLTGDGIAPFGFELLANSV 152
Query: 195 DSNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNACGA 16
D+ + DRILRV+IEI++A+GS+G++DG +RE ++D IEYV KKK GE++ACGA
Sbjct: 153 DTTHPDRILRVVIEISRASGSQGLVDGLYREKQIVDQRSRFEFIEYVSKKKYGEMHACGA 212
Query: 15 ACGAI 1
A G I
Sbjct: 213 ASGVI 217
>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
Chain A, Crystal Structure Of Geranyl Diphosphate
Synthase Small Subunit From Antirrhinum Majus
Length = 273
Score = 220 bits (561), Expect = 3e-55
Identities = 115/185 (62%), Positives = 140/185 (75%), Gaps = 3/185 (1%)
Frame = -1
Query: 546 ANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXX 367
A IESDI+++LKK+IPIRAPE VFEPMH+LTFAAPRT+A ALC+AACE+VGGD
Sbjct: 11 ATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAA 70
Query: 366 XXXXXXXXXXXXXHENLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD-- 193
HENLPLTD K IQHKF+ NIELLTGDGI+P+G EL+A+SMD
Sbjct: 71 AAAVHLMHVAAYTHENLPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPT 130
Query: 192 SNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEIN-MGLIEYVCKKKEGELNACGA 16
NN DRILR IIE+T+ GS+GI++GQ+ EL + +++N + LIEYVCKKKEG L+ACGA
Sbjct: 131 RNNPDRILRAIIELTRVMGSEGIVEGQYHELGL--NQLNDLELIEYVCKKKEGTLHACGA 188
Query: 15 ACGAI 1
ACGAI
Sbjct: 189 ACGAI 193
>gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia
miltiorrhiza]
Length = 314
Score = 216 bits (550), Expect = 5e-54
Identities = 118/226 (52%), Positives = 157/226 (69%), Gaps = 4/226 (1%)
Frame = -1
Query: 666 ISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIPIRAP 487
+S ++N +++F +RS+LS ++ +V+ + WA IE+DI T+LKKSI IR+P
Sbjct: 15 MSIYVNT-KSSFPFKTRSNLSRSS--RACTAVVAQNHSYWAAIEADIDTYLKKSIAIRSP 71
Query: 486 EDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXHENLPLT 307
E VFEPMH+LTFAAPRT A A+C+AACE+VGG+ Q HE+LPLT
Sbjct: 72 ETVFEPMHHLTFAAPRTAASAICVAACELVGGERSQAIATASAIHIMHAAAYAHEHLPLT 131
Query: 306 DRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSM--DSNNSDRILRVIIEITQAA 139
DR RP KP IQHK+ NIELLTGDG+ +GFELLA S+ D N +RILRVIIEI++A+
Sbjct: 132 DRPRPNSKPAIQHKYGPNIELLTGDGMASFGFELLAGSIRSDHPNPERILRVIIEISRAS 191
Query: 138 GSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGAI 1
GS+GIIDG +RE +++D IEY+C+KK GE++AC AA GAI
Sbjct: 192 GSEGIIDGFYREKEIVDQHSRFDFIEYLCRKKYGEMHACAAASGAI 237
>gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha canadensis]
Length = 313
Score = 214 bits (545), Expect = 2e-53
Identities = 125/241 (51%), Positives = 154/241 (63%), Gaps = 21/241 (8%)
Frame = -1
Query: 660 SFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNS----------------WANIESD 529
S IN +T F +RSDLS R +S CM + + WA IE+D
Sbjct: 6 SHINS-KTCFPLKTRSDLS------RSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEAD 58
Query: 528 IQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXX 349
I +LKKSI IR PE VF PMH+LTFAAP T A ALC+AACE+VGGD Q
Sbjct: 59 IDRYLKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDRSQAMAAAAAIHL 118
Query: 348 XXXXXXXHENLPLTDRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD---SNN 184
HE+LPLTD RP KP IQHK+ N+ELLTGDGIVP+GFELLA S+D +++
Sbjct: 119 VHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDD 178
Query: 183 SDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGA 4
DRILRVIIEI++A G +G+I G RE +++D ++ IEYVCKKK GE++ACGAACGA
Sbjct: 179 PDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHACGAACGA 238
Query: 3 I 1
I
Sbjct: 239 I 239
>gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
gi|10637873|emb|CAC10560.1| gpp synthase small subunit
[Mentha x piperita]
Length = 313
Score = 213 bits (543), Expect = 4e-53
Identities = 124/241 (51%), Positives = 154/241 (63%), Gaps = 21/241 (8%)
Frame = -1
Query: 660 SFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNS----------------WANIESD 529
S IN +T F +RSDLS R +S CM + + WA IE+D
Sbjct: 6 SHINS-KTCFPLKTRSDLS------RSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEAD 58
Query: 528 IQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXX 349
I+ +LKKSI IR PE VF PMH+LTFAAP T A LC+AACE+VGGD Q
Sbjct: 59 IERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMAAAAAIHL 118
Query: 348 XXXXXXXHENLPLTDRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD---SNN 184
HE+LPLTD RP KP IQHK+ N+ELLTGDGIVP+GFELLA S+D +++
Sbjct: 119 VHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDD 178
Query: 183 SDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGA 4
DRILRVIIEI++A G +G+I G RE +++D ++ IEYVCKKK GE++ACGAACGA
Sbjct: 179 PDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHACGAACGA 238
Query: 3 I 1
I
Sbjct: 239 I 239
>gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita]
Length = 313
Score = 213 bits (542), Expect = 5e-53
Identities = 124/235 (52%), Positives = 153/235 (65%), Gaps = 15/235 (6%)
Frame = -1
Query: 660 SFINGGRTTFLSISRSDLSPT-------TPPHRPNSVICMKSNS---WANIESDIQTHLK 511
S IN +T F +RSDLS + T +I + S WA IE+DI +LK
Sbjct: 6 SHINS-KTCFPLKTRSDLSRSSSGRCMPTAAAAAFPIIATAAQSQPYWAAIEADIDRYLK 64
Query: 510 KSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXX 331
KSI IR PE VF PMH+LTFAAP T A ALC+AACE+VGGD Q
Sbjct: 65 KSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDRSQAMAAAAAIHLVHAAAY 124
Query: 330 XHENLPLTDRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD---SNNSDRILR 166
HE+LPLTD RP KP IQHK+ N+ELLTGDGIVP+GFELLA S+D +++ DRILR
Sbjct: 125 VHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRILR 184
Query: 165 VIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGAI 1
VIIEI++A G +G+I G RE +++D ++ IEYVCKKK GE++ACGAACGAI
Sbjct: 185 VIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHACGAACGAI 239
>pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium gi|289526779|pdb|3KRA|C Chain C,
Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium gi|289526782|pdb|3KRC|B Chain B,
Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp gi|289526783|pdb|3KRC|C Chain C, Mint
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp gi|289526786|pdb|3KRF|B Chain B, Mint
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (i)
gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With
Magnesium, Ipp, And Dmaspp (i) gi|289526790|pdb|3KRO|B
Chain B, Mint Heterotetrameric Geranyl Pyrophosphate
Synthase In Complex With Magnesium, Ipp, And Dmaspp (ii)
gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With
Magnesium, Ipp, And Dmaspp (ii) gi|289526794|pdb|3KRP|B
Chain B, Mint Heterotetrameric Geranyl Pyrophosphate
Synthase In Complex With Magnesium And Gpp
gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With Magnesium
And Gpp
Length = 274
Score = 212 bits (539), Expect = 1e-52
Identities = 110/188 (58%), Positives = 135/188 (71%), Gaps = 5/188 (2%)
Frame = -1
Query: 549 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 370
WA IE+DI+ +LKKSI IR PE VF PMH+LTFAAP T A LC+AACE+VGGD Q
Sbjct: 5 WAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMA 64
Query: 369 XXXXXXXXXXXXXXHENLPLTDRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSM 196
HE+LPLTD RP KP IQHK+ N+ELLTGDGIVP+GFELLA S+
Sbjct: 65 AAAAIHLVHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSV 124
Query: 195 D---SNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNA 25
D +++ DRILRVIIEI++A G +G+I G RE +++D ++ IEYVCKKK GE++A
Sbjct: 125 DPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHA 184
Query: 24 CGAACGAI 1
CGAACGAI
Sbjct: 185 CGAACGAI 192
>pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ligands gi|310942868|pdb|3OAC|B Chain B,
Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ligands
Length = 264
Score = 198 bits (504), Expect = 1e-48
Identities = 104/186 (55%), Positives = 129/186 (69%), Gaps = 3/186 (1%)
Frame = -1
Query: 549 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 370
WA IE+DI+ +LKKSI IR PE VF PMH+LTFAAP T A LC+AACE+VGGD Q
Sbjct: 5 WAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMA 64
Query: 369 XXXXXXXXXXXXXXHENLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD- 193
HE+LP P IQHK+ N+ELLTGDGIVP+GFELLA S+D
Sbjct: 65 AAAAIHLVHAAAYVHEHLP--------PAIQHKYGPNVELLTGDGIVPFGFELLAGSVDP 116
Query: 192 --SNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNACG 19
+++ DRILRVIIEI++A G +G+I G RE +++D ++ IEYVCKKK GE++ACG
Sbjct: 117 ARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHACG 176
Query: 18 AACGAI 1
AACGAI
Sbjct: 177 AACGAI 182
>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223527725|gb|EEF29831.1| geranyl geranyl
pyrophosphate synthase, putative [Ricinus communis]
Length = 308
Score = 197 bits (500), Expect = 3e-48
Identities = 107/204 (52%), Positives = 136/204 (66%), Gaps = 13/204 (6%)
Frame = -1
Query: 573 VICMKSNS-----WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAA 409
V C+ SNS W I +DI+THLK++IP+R P VFEPMH+LTFAAPR+ APALCIAA
Sbjct: 36 VACVMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAA 95
Query: 408 CEVVGGDGDQXXXXXXXXXXXXXXXXXHENLPLTDRRRP--KPPIQHKFNSNIELLTGDG 235
CE+VGG DQ HEN+PLTDR RP +P H F NIELLTGDG
Sbjct: 96 CELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIELLTGDG 155
Query: 234 IVPYGFELLAK--SMDSNNSDRILRVIIEITQAAGSKGIIDGQFREL----DVIDSEINM 73
++P+ FELLA+ + +NSDRILRV+IEI++A GS+G+++GQ+ E V D ++
Sbjct: 156 MIPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHV 215
Query: 72 GLIEYVCKKKEGELNACGAACGAI 1
+ VCKKKEG +AC ACGAI
Sbjct: 216 AWLRDVCKKKEGASHACAGACGAI 239
>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 196 bits (498), Expect = 6e-48
Identities = 113/236 (47%), Positives = 152/236 (64%), Gaps = 10/236 (4%)
Frame = -1
Query: 678 MAKAISSFINGGRTTFLSISRSDLSPTTP--PHRPNSVICMKSNS-WANIESDIQTHLKK 508
MA A+SS I+G ++ + S +P P HRP V S W+++ +D+ THLK+
Sbjct: 1 MAGALSSTIHGN---LIARAVSSSNPKHPLFSHRPMVVAMSTDQSYWSSVNADLDTHLKQ 57
Query: 507 SIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXX 328
+IPIR P VFEPM +L +AP+T+APALCIAACE+VGG +Q
Sbjct: 58 AIPIRQPLAVFEPMRHLILSAPQTSAPALCIAACELVGGHRNQAMAAASALRLVHASAST 117
Query: 327 HENLPLTDRRRPKPPIQHK-FNSNIELLTGDGIVPYGFELLAKSMDS--NNSDRILRVII 157
HENLPLTDR RP P + + NIELL DGI+PYGFELLA+ D+ NNS+R+LR II
Sbjct: 118 HENLPLTDRPRPMPRTRPTLYGPNIELLIADGIIPYGFELLARDDDAAENNSNRVLRAII 177
Query: 156 EITQAAGSKGIIDGQFRELDVIDSE----INMGLIEYVCKKKEGELNACGAACGAI 1
EI++A GS+G+I+GQ+ E +SE ++G ++ VC+KKEG L+AC ACGAI
Sbjct: 178 EISRAMGSQGVIEGQYNESQYEESEGEEIFHVGWLQNVCRKKEGTLHACAGACGAI 233
>ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Solanum lycopersicum]
Length = 269
Score = 194 bits (494), Expect = 2e-47
Identities = 103/193 (53%), Positives = 132/193 (68%), Gaps = 10/193 (5%)
Frame = -1
Query: 549 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 370
WA+IESDI+ HLKK+I IRAPE VFEPMHYLTF P++TAPALC+AACE+VGGD D+
Sbjct: 8 WASIESDIEAHLKKAISIRAPESVFEPMHYLTFTTPKSTAPALCVAACELVGGDRDRAMA 67
Query: 369 XXXXXXXXXXXXXXHENLPLTDRRRPKPPI-------QHKFNSNIELLTGDGIVPYGFEL 211
H+++ + R P P I +HKF NIELLTGDGI+P+ EL
Sbjct: 68 AASAIHLMHVATYTHQHMTMA-RTEPGPVIEHKDIEPEHKFGPNIELLTGDGIMPFAIEL 126
Query: 210 LAKSMD--SNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDS-EINMGLIEYVCKKKE 40
+ K+M NSD+I+ VIIE+T+A GS+G ++GQ+REL+ S + EYVCKKKE
Sbjct: 127 IVKAMSPARKNSDKIVSVIIEVTRAFGSQGQLEGQYRELEWAQSGNEDEETFEYVCKKKE 186
Query: 39 GELNACGAACGAI 1
GE++ACGA CGAI
Sbjct: 187 GEIHACGATCGAI 199
>gb|EPS64735.1| geranyl diphosphate synthase small subunit, partial [Genlisea
aurea]
Length = 211
Score = 194 bits (492), Expect = 3e-47
Identities = 99/187 (52%), Positives = 135/187 (72%), Gaps = 4/187 (2%)
Frame = -1
Query: 549 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 370
W I+ D+Q +LK++IP PE V+EPM +LTFAAP TTA +LC+AACE+VGGD Q
Sbjct: 3 WEGIQCDVQLYLKEAIPRGPPEAVYEPMRHLTFAAPTTTASSLCVAACELVGGDRKQAIA 62
Query: 369 XXXXXXXXXXXXXXHENLPLTDRRRP-KPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD 193
HE+LPLT+ P + PI+H++ NIELLTGDG++P+G EL+A+SMD
Sbjct: 63 AAAALHLMHAALYAHEHLPLTEGHPPSRRPIEHRYGPNIELLTGDGLIPFGVELVAQSMD 122
Query: 192 --SNNSDRILRVIIEITQAAGSKGIIDGQFRELDV-IDSEINMGLIEYVCKKKEGELNAC 22
SNN DRIL+VIIEIT+A GS+G++DG +R ++ + S+ ++ +EYVCKK EGE++AC
Sbjct: 123 PSSNNHDRILKVIIEITRATGSQGMVDGLYRRKNLELHSDSDITELEYVCKKIEGEIHAC 182
Query: 21 GAACGAI 1
G ACGAI
Sbjct: 183 GGACGAI 189
>ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa]
gi|550321901|gb|EEF06199.2| hypothetical protein
POPTR_0015s04050g [Populus trichocarpa]
Length = 312
Score = 188 bits (478), Expect = 1e-45
Identities = 109/218 (50%), Positives = 138/218 (63%), Gaps = 10/218 (4%)
Frame = -1
Query: 624 ISRSDLSPTTPPHRPNSVICMKSNS--------WANIESDIQTHLKKSIPIRAPEDVFEP 469
+ RS+ + HRP +V +++ W ++ +I HLK++IPIR P VFEP
Sbjct: 20 LPRSNTNRPLLSHRPMTVAVTATSNGTTYNKSYWTSVNDEIDAHLKQAIPIRPPLSVFEP 79
Query: 468 MHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXHENLPLTDRRRPK 289
MH+LTFAAPRTTAPALCIAACE+VGG+ DQ HE++ T R
Sbjct: 80 MHHLTFAAPRTTAPALCIAACELVGGNRDQAMAAASALRLMHAAALTHEHILSTGNR--- 136
Query: 288 PPIQHKFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEITQAAGSKGIIDG 115
I H F SNIELLTGDG+VP+G ELLAKS D NNS+RILRVIIEITQA GS+G+ G
Sbjct: 137 ARIGHSFGSNIELLTGDGMVPFGLELLAKSDDLTQNNSERILRVIIEITQAMGSQGMALG 196
Query: 114 QFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGAI 1
Q+ + S+ I++VCKKKEGEL++C A GAI
Sbjct: 197 QYNQFQHGQSD----YIDHVCKKKEGELHSCAGAVGAI 230
>ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cicer arietinum]
Length = 302
Score = 187 bits (476), Expect = 2e-45
Identities = 102/221 (46%), Positives = 141/221 (63%), Gaps = 10/221 (4%)
Frame = -1
Query: 633 FLSISRSDLSPTTPPHRPNSVICMKSNS------WANIESDIQTHLKKSIPIRAPEDVFE 472
F IS+S+ + P +P +V + + WA++++DI+ HLK+SI I+ P VFE
Sbjct: 17 FSCISKSNQYRSHLPLKPTTVRMSMTQTHHTHPYWASLQADIEAHLKQSITIKEPLVVFE 76
Query: 471 PMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXHENLPLTDRRRP 292
PMH+L F AP+TT PALC+AACE+VGG +Q HE+L L+DR +P
Sbjct: 77 PMHHLVFNAPKTTVPALCLAACELVGGQRNQAISAASALLLMEAATYTHEHLLLSDRPKP 136
Query: 291 KPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDSNNSDRILRVIIEITQAAGSKGIIDGQ 112
KP I H + N+ELLTGDGIVP+GFELLA+S NS+RILRV++EI++A GS G+ID Q
Sbjct: 137 KPVITHAYGPNVELLTGDGIVPFGFELLARSNGGENSERILRVMVEISRAVGSGGVIDAQ 196
Query: 111 FREL----DVIDSEINMGLIEYVCKKKEGELNACGAACGAI 1
+R+ D ++ I V +K EGEL+ACGA CG +
Sbjct: 197 YRKTMDSGSDGDEMCHVEGIRRVVEKYEGELHACGAVCGGV 237
>gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma cacao]
Length = 300
Score = 182 bits (463), Expect = 7e-44
Identities = 106/233 (45%), Positives = 143/233 (61%), Gaps = 7/233 (3%)
Frame = -1
Query: 678 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNS-WANIESDIQTHLKKSI 502
MA+A+S ING + + P P++P V + S WA+I +DI+ HLK++I
Sbjct: 1 MARALSH-INGN-----PLLQVPCRPNPMPYKPMMVTMSCNQSYWASINADIEAHLKQAI 54
Query: 501 PIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXHE 322
P+R P V +PMH+LTFA P+ TAPALC+AACE+VGG DQ HE
Sbjct: 55 PVREPLSVSQPMHHLTFACPKNTAPALCVAACELVGGHRDQALPAASALHLMYAASFTHE 114
Query: 321 NLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEIT 148
LPLT RP+ IQH + NIELL GD ++P G ELLA+S D +S+R+LRV++EIT
Sbjct: 115 QLPLTQSSRPRSTIQHAYGPNIELLIGDAMIPSGLELLARSDDPAHTDSERVLRVMVEIT 174
Query: 147 QAAGSKGIIDGQFRELDVIDS----EINMGLIEYVCKKKEGELNACGAACGAI 1
+A GS+G+I GQ+ E++ S M IE + +K EG L+AC AACGAI
Sbjct: 175 RATGSQGMIHGQYYEVERCQSGNKEASYMVEIERISEKYEGALHACAAACGAI 227
>gb|EMJ15727.1| hypothetical protein PRUPE_ppa015010mg [Prunus persica]
Length = 296
Score = 182 bits (462), Expect = 9e-44
Identities = 101/213 (47%), Positives = 139/213 (65%), Gaps = 5/213 (2%)
Frame = -1
Query: 624 ISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAA 445
+SRS+ P+ P +++ WA++ ++I+ HLK+ I +R P VFEPMH+L F+A
Sbjct: 18 MSRSN--PSRPSRTTMAIMSQDHPYWASVHAEIEVHLKQHILVRPPLSVFEPMHHLVFSA 75
Query: 444 PRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXHENLPLTDRRRPKP---PIQH 274
P + PALC+AACE+VGG DQ HE L TDR + KP P+ H
Sbjct: 76 PPSPGPALCVAACELVGGHRDQAIAAAAALHLMHAAAVIHEQLLSTDRLKTKPKPRPMVH 135
Query: 273 KFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEITQAAGSKGIIDGQFREL 100
+ IELLTGDG+ +G+ELLAKSMD NNSDRILRVI+E+T+A GS+G++DGQ+ E+
Sbjct: 136 --SPGIELLTGDGMFAFGYELLAKSMDPAQNNSDRILRVIVEMTRAMGSQGMVDGQYHEI 193
Query: 99 DVIDSEINMGLIEYVCKKKEGELNACGAACGAI 1
++ + +YVC+KKEG L+ACGAACGAI
Sbjct: 194 LMLCKQSRH--YKYVCEKKEGGLHACGAACGAI 224
>emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]
Length = 298
Score = 172 bits (436), Expect = 9e-41
Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 9/199 (4%)
Frame = -1
Query: 570 ICMKSNSWANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGG 391
+ KS+ W +I DI HL++ I IR P VF+PMH+LTFAAP TTAPALCIAACE+ GG
Sbjct: 34 MAQKSSYWNSINDDIDAHLRRVITIREPFSVFKPMHHLTFAAPETTAPALCIAACELFGG 93
Query: 390 DGDQXXXXXXXXXXXXXXXXXHENLPLTDRRRPKPPIQ--HKFNSNIELLTGDGIVPYGF 217
+ HE++PLTD+ RP P + F NIELLTGDG++P+G
Sbjct: 94 RRELAIAAASALHLMHAASYFHEHIPLTDQTRPNSPPRPGPTFGPNIELLTGDGMIPFGL 153
Query: 216 ELLAKSM----DSNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINM---GLIEY 58
ELLAKS D +SDRIL+VIIE+T+ GS+G+++GQ+ + +S ++ G
Sbjct: 154 ELLAKSNNLDDDDEHSDRILQVIIELTRXIGSQGVVNGQYIQAQCDESSPSVGKAGSTRI 213
Query: 57 VCKKKEGELNACGAACGAI 1
V KK EL+ACGAACGAI
Sbjct: 214 VTDKKGTELHACGAACGAI 232
>ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355518891|gb|AET00515.1| Geranylgeranyl pyrophosphate
synthase [Medicago truncatula]
Length = 297
Score = 172 bits (435), Expect = 1e-40
Identities = 90/188 (47%), Positives = 125/188 (66%), Gaps = 5/188 (2%)
Frame = -1
Query: 549 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 370
WA++ +DI+ HLK++I I+ P VFEPMH+L F AP+TT PALC+A CE+VGG Q
Sbjct: 47 WASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLATCELVGGQRHQAIS 106
Query: 369 XXXXXXXXXXXXXXHENLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDS 190
HE+LPLTD RP+P I H + N+ELLTGDGIVP+GFELLA+S
Sbjct: 107 AASALLLMEAATYTHEHLPLTD--RPRPMINHVYGPNMELLTGDGIVPFGFELLARSDGG 164
Query: 189 NNSDRILRVIIEITQAAGS-KGIIDGQFRELDVIDSE----INMGLIEYVCKKKEGELNA 25
NS+RIL+V++EI++A GS G+ID Q+ ++ S+ ++ I +V +K EG L++
Sbjct: 165 ENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHVEEIRHVVEKYEGRLHS 224
Query: 24 CGAACGAI 1
CGA CG +
Sbjct: 225 CGAVCGGV 232