BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00012953
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ16187.1| hypothetical protein PRUPE_ppa002028mg [Prunus pe...   102   5e-20
ref|XP_006341682.1| PREDICTED: putative pentatricopeptide repeat...    93   3e-17
ref|XP_006385300.1| hypothetical protein POPTR_0003s02590g [Popu...    92   7e-17
gb|EOY25899.1| Pentatricopeptide repeat superfamily protein [The...    92   7e-17
ref|XP_002327523.1| predicted protein [Populus trichocarpa]            92   9e-17
ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    91   2e-16
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat...    91   2e-16
ref|XP_004236458.1| PREDICTED: putative pentatricopeptide repeat...    89   6e-16
ref|XP_003604365.1| Pentatricopeptide repeat-containing protein ...    89   6e-16
gb|ESW07760.1| hypothetical protein PHAVU_010G157000g [Phaseolus...    86   7e-15
ref|XP_002517668.1| pentatricopeptide repeat-containing protein,...    86   7e-15
emb|CBI36352.3| unnamed protein product [Vitis vinifera]               84   3e-14
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat...    84   3e-14
ref|XP_003533068.2| PREDICTED: putative pentatricopeptide repeat...    83   3e-14
ref|XP_004303287.1| PREDICTED: putative pentatricopeptide repeat...    82   6e-14
gb|EXB67266.1| hypothetical protein L484_025746 [Morus notabilis]      81   2e-13
ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat...    79   5e-13
emb|CBI36755.3| unnamed protein product [Vitis vinifera]               79   6e-13
ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat...    79   6e-13
emb|CBI27471.3| unnamed protein product [Vitis vinifera]               77   2e-12

>gb|EMJ16187.1| hypothetical protein PRUPE_ppa002028mg [Prunus persica]
          Length = 726

 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/123 (43%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
 Frame = +3

Query: 15  LSVIRSHAFRKNVTFAVSVYSFH---HFHNSRQTNPPSLGYLLQECRTLDQLKRIHGLAI 185
           LS    H+ +  +    SV   H   H H     NPP    L + C+++DQLK+IH   +
Sbjct: 18  LSFSVHHSLKSKMISMASVAPTHFPTHPHLQSFENPPVT--LFENCKSMDQLKQIHAQTM 75

Query: 186 QKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFVKILEPSVYLWNIMIKGYSRINCPEDA 365
           + GL  H  V ++II FCCT++FGDM YAR +F  I EPSV+LWN M+KGYSRI  P+  
Sbjct: 76  KTGLTAHPMVLNRIIVFCCTDEFGDMKYARRVFDTIPEPSVFLWNTMMKGYSRIRYPDYG 135

Query: 366 ASL 374
            S+
Sbjct: 136 VSM 138


>ref|XP_006341682.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Solanum tuberosum]
          Length = 752

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/102 (44%), Positives = 65/102 (63%)
 Frame = +3

Query: 69  VYSFHHFHNSRQTNPPSLGYLLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTN 248
           V+   H H S + + P L  L++ C+++DQL++IH + IQKGL     + S II FC  N
Sbjct: 34  VFQLAHLHLSPEIHLP-LQSLIERCKSMDQLRQIHSVIIQKGLISDPKLCSNIIAFCSNN 92

Query: 249 DFGDMNYARDLFVKILEPSVYLWNIMIKGYSRINCPEDAASL 374
           + GDM YAR +F  + E  V++WN MIKGYSR N P++  S+
Sbjct: 93  ELGDMKYARSVFDIMPERGVFIWNTMIKGYSRENSPQNGVSI 134


>ref|XP_006385300.1| hypothetical protein POPTR_0003s02590g [Populus trichocarpa]
           gi|550342241|gb|ERP63097.1| hypothetical protein
           POPTR_0003s02590g [Populus trichocarpa]
          Length = 764

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 14/112 (12%)
 Frame = +3

Query: 81  HHFHNS----------RQTNP----PSLGYLLQECRTLDQLKRIHGLAIQKGLDLHASVY 218
           HH H+S           Q++P    P L  L + C+++  LK+IH   I+ G+  +  + 
Sbjct: 16  HHLHSSFLKKMISMACSQSSPVTENPPLS-LFETCKSMYHLKQIHSRTIKTGIICNPIIQ 74

Query: 219 SKIIGFCCTNDFGDMNYARDLFVKILEPSVYLWNIMIKGYSRINCPEDAASL 374
           +KI+ FCC+ +FGDM YAR LF  I EPSV+ WNIM KGYSRI CP+   SL
Sbjct: 75  NKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSL 126


>gb|EOY25899.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 723

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 43/94 (45%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
 Frame = +3

Query: 96  SRQTNPPSLGYLLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYAR 275
           S    PP   +L++ C+++DQL++IH   ++ GL       +K+I FCCTN+ GDMN+A 
Sbjct: 14  SHNLEPPL--FLIENCKSMDQLQQIHCQTVKSGLIRKPISQNKLISFCCTNESGDMNHAL 71

Query: 276 DLFVKILEP-SVYLWNIMIKGYSRINCPEDAASL 374
            +F +I EP SV+LWN MIKGYSR++CP+   S+
Sbjct: 72  QMFNQISEPKSVFLWNTMIKGYSRVDCPKHGISM 105


>ref|XP_002327523.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 44/89 (49%), Positives = 59/89 (66%)
 Frame = +3

Query: 108 NPPSLGYLLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFV 287
           NPP    L + C+++  LK+IH   I+ G+  +  + +KI+ FCC+ +FGDM YAR LF 
Sbjct: 15  NPPLS--LFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFD 72

Query: 288 KILEPSVYLWNIMIKGYSRINCPEDAASL 374
            I EPSV+ WNIM KGYSRI CP+   SL
Sbjct: 73  TIPEPSVFSWNIMFKGYSRIACPKLGVSL 101


>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 40/91 (43%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
 Frame = +3

Query: 108 NPPS--LGYLLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDL 281
           +PP+  L  LL+ C ++DQL+++H  AI+KGL+ +  + ++++ FCCT+++GD  YAR L
Sbjct: 36  SPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 95

Query: 282 FVKILEPSVYLWNIMIKGYSRINCPEDAASL 374
           F +I EP++++WN MI+GYSR++ P+   SL
Sbjct: 96  FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSL 126


>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 40/91 (43%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
 Frame = +3

Query: 108 NPPS--LGYLLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDL 281
           +PP+  L  LL+ C ++DQL+++H  AI+KGL+ +  + ++++ FCCT+++GD  YAR L
Sbjct: 15  SPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 74

Query: 282 FVKILEPSVYLWNIMIKGYSRINCPEDAASL 374
           F +I EP++++WN MI+GYSR++ P+   SL
Sbjct: 75  FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSL 105


>ref|XP_004236458.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Solanum lycopersicum]
          Length = 752

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 44/102 (43%), Positives = 64/102 (62%)
 Frame = +3

Query: 69  VYSFHHFHNSRQTNPPSLGYLLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTN 248
           V+   H H S + + P L  L+++C+++DQL++I  + IQKGL     + S +I FC  N
Sbjct: 34  VFQLAHLHLSPEIHLP-LQSLIEKCKSMDQLRQIQSVIIQKGLISDPKLCSNMITFCSNN 92

Query: 249 DFGDMNYARDLFVKILEPSVYLWNIMIKGYSRINCPEDAASL 374
           + GDM YAR +F  + E  V++WN MIKGYSR N P D  S+
Sbjct: 93  ESGDMKYARSVFDIMPERGVFIWNTMIKGYSRENIPHDGVSI 134


>ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355505420|gb|AES86562.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 874

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 40/82 (48%), Positives = 56/82 (68%)
 Frame = +3

Query: 129 LLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFVKILEPSV 308
           LL+ C T+ ++ +IH   I+ GL  +    +K+I FCCT + GD+ YAR +F +I +PSV
Sbjct: 41  LLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSV 100

Query: 309 YLWNIMIKGYSRINCPEDAASL 374
           ++WN MIKGYSRINC E   SL
Sbjct: 101 FIWNTMIKGYSRINCSESGVSL 122


>gb|ESW07760.1| hypothetical protein PHAVU_010G157000g [Phaseolus vulgaris]
          Length = 746

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 36/82 (43%), Positives = 56/82 (68%)
 Frame = +3

Query: 129 LLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFVKILEPSV 308
           LL+ C+++ QLK+IH   ++ GL  +    ++++ FCC +  GDM+YAR +F  I +P+ 
Sbjct: 47  LLERCKSMYQLKQIHSHIVKIGLSSYPLFQNRVLAFCCAHQSGDMDYARQVFDTITQPTA 106

Query: 309 YLWNIMIKGYSRINCPEDAASL 374
           + WN MIKGYSRIN PE+  S+
Sbjct: 107 FTWNTMIKGYSRINRPENGISM 128


>ref|XP_002517668.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543300|gb|EEF44832.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 512

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 39/75 (52%), Positives = 51/75 (68%)
 Frame = +3

Query: 150 LDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFVKILEPSVYLWNIMI 329
           +DQLK+IH   I+ G      + +KI  FCCT +FGDMNYAR LF  I EP+V+ WN M+
Sbjct: 1   MDQLKQIHSQTIKTGTICKPIIQNKIFSFCCTQEFGDMNYARQLFDTIPEPTVFHWNTML 60

Query: 330 KGYSRINCPEDAASL 374
           KGYSRI+ P+   S+
Sbjct: 61  KGYSRIDSPKLGVSM 75


>emb|CBI36352.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 42/97 (43%), Positives = 61/97 (62%)
 Frame = +3

Query: 84  HFHNSRQTNPPSLGYLLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDM 263
           H  +  QT P SL   ++ C+++ QLK+IH   I  GL  +  V ++II FCC ++ GDM
Sbjct: 13  HLPSLPQTPPLSL---IKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDM 69

Query: 264 NYARDLFVKILEPSVYLWNIMIKGYSRINCPEDAASL 374
            YAR +F  +  P+ ++WN MIKGYSR+ CP  A S+
Sbjct: 70  EYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSM 106


>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 42/97 (43%), Positives = 61/97 (62%)
 Frame = +3

Query: 84  HFHNSRQTNPPSLGYLLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDM 263
           H  +  QT P SL   ++ C+++ QLK+IH   I  GL  +  V ++II FCC ++ GDM
Sbjct: 13  HLPSLPQTPPLSL---IKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDM 69

Query: 264 NYARDLFVKILEPSVYLWNIMIKGYSRINCPEDAASL 374
            YAR +F  +  P+ ++WN MIKGYSR+ CP  A S+
Sbjct: 70  EYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSM 106


>ref|XP_003533068.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 738

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/82 (43%), Positives = 56/82 (68%)
 Frame = +3

Query: 129 LLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFVKILEPSV 308
           LL++C+++ QLK+IH   I+ GL        ++I FCC ++ G M YAR +F  I +P++
Sbjct: 39  LLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTL 98

Query: 309 YLWNIMIKGYSRINCPEDAASL 374
           ++WN MIKGYSRIN P++  S+
Sbjct: 99  FIWNTMIKGYSRINHPQNGVSM 120


>ref|XP_004303287.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Fragaria vesca subsp. vesca]
          Length = 693

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 37/75 (49%), Positives = 50/75 (66%)
 Frame = +3

Query: 150 LDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFVKILEPSVYLWNIMI 329
           +DQLK++H   I+ G     +  S+II FCC ++FGDM YAR +F +I EPSV++WN MI
Sbjct: 1   MDQLKQMHAQIIETGFASDPAALSRIIVFCCAHEFGDMKYARQVFDRIPEPSVFIWNTMI 60

Query: 330 KGYSRINCPEDAASL 374
           KGYSR  C     S+
Sbjct: 61  KGYSRTYCAHYGISM 75


>gb|EXB67266.1| hypothetical protein L484_025746 [Morus notabilis]
          Length = 721

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/82 (46%), Positives = 58/82 (70%)
 Frame = +3

Query: 129 LLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFVKILEPSV 308
           L + C+++DQL++IH   I+KG+     V +KI+ F C ++ G+M YAR LF +I EPSV
Sbjct: 23  LFENCKSVDQLRQIHAHTIKKGIMSSPLVQNKIVAFPCEHEGGNMLYARRLFDEIPEPSV 82

Query: 309 YLWNIMIKGYSRINCPEDAASL 374
           ++ N MI+GYSR+N P+D  S+
Sbjct: 83  FVCNTMIEGYSRLNRPKDGVSM 104


>ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Citrus sinensis]
          Length = 741

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
 Frame = +3

Query: 27  RSHAFRKNVTFAVSVYSFHHFHNSRQTNPPS-------LGYLLQECRTLDQLKRIHGLAI 185
           R+H  +K          F+   ++   +PPS       L  L++ C ++ QLK+IH   I
Sbjct: 8   RTHVLKKTPII------FNKMFSNSSISPPSTLTQETPLISLIETCESMHQLKQIHSQTI 61

Query: 186 QKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFVKILEPSVYLWNIMIKGYSRIN 350
           + GL  + +V +K++ FCC+   GDM YA  +F KI  PSV+LWN MIKGYSRI+
Sbjct: 62  KLGLLTNPTVQNKLVTFCCSEK-GDMKYACKVFRKIPRPSVFLWNTMIKGYSRID 115


>emb|CBI36755.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 34/82 (41%), Positives = 56/82 (68%)
 Frame = +3

Query: 129 LLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFVKILEPSV 308
           LL++C+T+ +LKR+HGL I   +       S+++ FC  +D G++NYA+ +F +I  PS+
Sbjct: 11  LLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRPSL 70

Query: 309 YLWNIMIKGYSRINCPEDAASL 374
           Y+WN MIKGYS    P++A ++
Sbjct: 71  YIWNSMIKGYSISESPDEALTM 92


>ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240 [Vitis vinifera]
          Length = 565

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 34/82 (41%), Positives = 56/82 (68%)
 Frame = +3

Query: 129 LLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYARDLFVKILEPSV 308
           LL++C+T+ +LKR+HGL I   +       S+++ FC  +D G++NYA+ +F +I  PS+
Sbjct: 11  LLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRPSL 70

Query: 309 YLWNIMIKGYSRINCPEDAASL 374
           Y+WN MIKGYS    P++A ++
Sbjct: 71  YIWNSMIKGYSISESPDEALTM 92


>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/93 (37%), Positives = 57/93 (61%)
 Frame = +3

Query: 96  SRQTNPPSLGYLLQECRTLDQLKRIHGLAIQKGLDLHASVYSKIIGFCCTNDFGDMNYAR 275
           S ++N     +LLQ C  +++L++IHG  ++ GL L     SK++ FC + + G + YAR
Sbjct: 13  SSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYAR 72

Query: 276 DLFVKILEPSVYLWNIMIKGYSRINCPEDAASL 374
            +F +I  P+ ++WN MI+GYS    PE+A  L
Sbjct: 73  TVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLL 105