BLASTX nr result
ID: Catharanthus23_contig00012845
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00012845
(683 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006453447.1| hypothetical protein CICLE_v10010045mg [Citr... 169 7e-40
ref|XP_004235398.1| PREDICTED: small nuclear ribonucleoprotein E... 168 1e-39
gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasilie... 168 2e-39
gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatr... 167 3e-39
ref|XP_006353941.1| PREDICTED: small nuclear ribonucleoprotein E... 167 4e-39
gb|EPS66594.1| hypothetical protein M569_08185 [Genlisea aurea] 166 5e-39
gb|EMJ13516.1| hypothetical protein PRUPE_ppa014076mg [Prunus pe... 166 5e-39
ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E... 166 5e-39
ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E... 166 5e-39
ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [S... 166 5e-39
ref|XP_006659109.1| PREDICTED: small nuclear ribonucleoprotein E... 166 6e-39
ref|XP_006367615.1| PREDICTED: small nuclear ribonucleoprotein E... 166 6e-39
gb|EOY31715.1| Small nuclear ribonucleoprotein family protein [T... 166 8e-39
gb|EOY25715.1| Small nuclear ribonucleoprotein family protein [T... 166 8e-39
ref|XP_003549500.1| PREDICTED: small nuclear ribonucleoprotein E... 166 8e-39
ref|XP_002331664.1| predicted protein [Populus trichocarpa] gi|2... 166 8e-39
ref|XP_004139778.1| PREDICTED: small nuclear ribonucleoprotein E... 165 1e-38
ref|XP_003597961.1| Small nuclear ribonucleoprotein E [Medicago ... 165 1e-38
ref|XP_002522808.1| Small nuclear ribonucleoprotein E, putative ... 165 1e-38
ref|XP_004241476.1| PREDICTED: small nuclear ribonucleoprotein E... 165 1e-38
>ref|XP_006453447.1| hypothetical protein CICLE_v10010045mg [Citrus clementina]
gi|567922884|ref|XP_006453448.1| hypothetical protein
CICLE_v10010045mg [Citrus clementina]
gi|568840355|ref|XP_006474134.1| PREDICTED: small
nuclear ribonucleoprotein E-like [Citrus sinensis]
gi|557556673|gb|ESR66687.1| hypothetical protein
CICLE_v10010045mg [Citrus clementina]
gi|557556674|gb|ESR66688.1| hypothetical protein
CICLE_v10010045mg [Citrus clementina]
Length = 88
Score = 169 bits (428), Expect = 7e-40
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
H+KK TRK LGRILLKGDNITLMMNTGK
Sbjct: 61 HIKKNTRKPLGRILLKGDNITLMMNTGK 88
>ref|XP_004235398.1| PREDICTED: small nuclear ribonucleoprotein E-like [Solanum
lycopersicum]
Length = 88
Score = 168 bits (426), Expect = 1e-39
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKKT KQLGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKKTSKQLGRILLKGDNITLMMNTGK 88
>gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasiliensis]
Length = 88
Score = 168 bits (425), Expect = 2e-39
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKKTRK LGRILLKGDNITLMMNTGK
Sbjct: 61 NIKKKTRKSLGRILLKGDNITLMMNTGK 88
>gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatropha curcas]
Length = 88
Score = 167 bits (423), Expect = 3e-39
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKKTRK LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKKTRKSLGRILLKGDNITLMMNSGK 88
>ref|XP_006353941.1| PREDICTED: small nuclear ribonucleoprotein E-like [Solanum
tuberosum]
Length = 88
Score = 167 bits (422), Expect = 4e-39
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKKT KQLGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKKTSKQLGRILLKGDNITLMMNSGK 88
>gb|EPS66594.1| hypothetical protein M569_08185 [Genlisea aurea]
Length = 88
Score = 166 bits (421), Expect = 5e-39
Identities = 84/88 (95%), Positives = 86/88 (97%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
+KK +RKQLGRILLKGDNITLMMNTGK
Sbjct: 61 SVKKNSRKQLGRILLKGDNITLMMNTGK 88
>gb|EMJ13516.1| hypothetical protein PRUPE_ppa014076mg [Prunus persica]
Length = 88
Score = 166 bits (421), Expect = 5e-39
Identities = 84/88 (95%), Positives = 86/88 (97%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
+KKKTRK LGRILLKGDNITLMMNTGK
Sbjct: 61 SIKKKTRKSLGRILLKGDNITLMMNTGK 88
>ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
gi|356516401|ref|XP_003526883.1| PREDICTED: small
nuclear ribonucleoprotein E [Glycine max]
gi|502098396|ref|XP_004491225.1| PREDICTED: small
nuclear ribonucleoprotein E-like [Cicer arietinum]
gi|388501720|gb|AFK38926.1| unknown [Lotus japonicus]
Length = 88
Score = 166 bits (421), Expect = 5e-39
Identities = 83/88 (94%), Positives = 87/88 (98%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKK+RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKKSRKTLGRILLKGDNITLMMNTGK 88
>ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E [Glycine max]
gi|255627911|gb|ACU14300.1| unknown [Glycine max]
Length = 88
Score = 166 bits (421), Expect = 5e-39
Identities = 83/88 (94%), Positives = 87/88 (98%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKK+RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NIKKKSRKTLGRILLKGDNITLMMNTGK 88
>ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [Sorghum bicolor]
gi|241926921|gb|EES00066.1| hypothetical protein
SORBIDRAFT_03g001950 [Sorghum bicolor]
Length = 88
Score = 166 bits (421), Expect = 5e-39
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KK TRK LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKNTRKSLGRILLKGDNITLMMNTGK 88
>ref|XP_006659109.1| PREDICTED: small nuclear ribonucleoprotein E-like isoform X1 [Oryza
brachyantha]
Length = 88
Score = 166 bits (420), Expect = 6e-39
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KK TRK LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKDTRKSLGRILLKGDNITLMMNTGK 88
>ref|XP_006367615.1| PREDICTED: small nuclear ribonucleoprotein E-like [Solanum
tuberosum]
Length = 88
Score = 166 bits (420), Expect = 6e-39
Identities = 84/88 (95%), Positives = 86/88 (97%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKKT KQLGRILLK DNITLMMNTGK
Sbjct: 61 NVKKKTSKQLGRILLKSDNITLMMNTGK 88
>gb|EOY31715.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 88
Score = 166 bits (419), Expect = 8e-39
Identities = 83/88 (94%), Positives = 87/88 (98%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKK+RK LGRILLKGDNITLMMN+GK
Sbjct: 61 NIKKKSRKSLGRILLKGDNITLMMNSGK 88
>gb|EOY25715.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 114
Score = 166 bits (419), Expect = 8e-39
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK*R 284
++KKK+RK LGRILLKGDNITLMMN GK R
Sbjct: 61 NIKKKSRKSLGRILLKGDNITLMMNAGKVR 90
>ref|XP_003549500.1| PREDICTED: small nuclear ribonucleoprotein E [Glycine max]
gi|255628153|gb|ACU14421.1| unknown [Glycine max]
Length = 88
Score = 166 bits (419), Expect = 8e-39
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
+KKK+RK LGRILLKGDNITLMMNTGK
Sbjct: 61 SIKKKSRKTLGRILLKGDNITLMMNTGK 88
>ref|XP_002331664.1| predicted protein [Populus trichocarpa]
gi|224143797|ref|XP_002325079.1| predicted protein
[Populus trichocarpa] gi|566176981|ref|XP_006381848.1|
small nuclear ribonucleoprotein E [Populus trichocarpa]
gi|118483404|gb|ABK93602.1| unknown [Populus
trichocarpa] gi|550336606|gb|ERP59645.1| small nuclear
ribonucleoprotein E [Populus trichocarpa]
Length = 88
Score = 166 bits (419), Expect = 8e-39
Identities = 83/88 (94%), Positives = 87/88 (98%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKK+RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NIKKKSRKSLGRILLKGDNITLMMNTGK 88
>ref|XP_004139778.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cucumis sativus]
gi|449444032|ref|XP_004139779.1| PREDICTED: small
nuclear ribonucleoprotein E-like [Cucumis sativus]
gi|449502888|ref|XP_004161771.1| PREDICTED: small
nuclear ribonucleoprotein E-like [Cucumis sativus]
Length = 88
Score = 165 bits (418), Expect = 1e-38
Identities = 83/88 (94%), Positives = 87/88 (98%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKK+RK LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKKSRKTLGRILLKGDNITLMMNSGK 88
>ref|XP_003597961.1| Small nuclear ribonucleoprotein E [Medicago truncatula]
gi|357491039|ref|XP_003615807.1| Small nuclear
ribonucleoprotein E [Medicago truncatula]
gi|355487009|gb|AES68212.1| Small nuclear
ribonucleoprotein E [Medicago truncatula]
gi|355517142|gb|AES98765.1| Small nuclear
ribonucleoprotein E [Medicago truncatula]
gi|388498322|gb|AFK37227.1| unknown [Medicago
truncatula]
Length = 88
Score = 165 bits (418), Expect = 1e-38
Identities = 82/88 (93%), Positives = 87/88 (98%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKK++K LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKKSKKTLGRILLKGDNITLMMNTGK 88
>ref|XP_002522808.1| Small nuclear ribonucleoprotein E, putative [Ricinus communis]
gi|223538046|gb|EEF39659.1| Small nuclear
ribonucleoprotein E, putative [Ricinus communis]
Length = 88
Score = 165 bits (418), Expect = 1e-38
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQ WLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQFWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KKK+RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKKSRKTLGRILLKGDNITLMMNTGK 88
>ref|XP_004241476.1| PREDICTED: small nuclear ribonucleoprotein E-like [Solanum
lycopersicum] gi|565361257|ref|XP_006347373.1|
PREDICTED: small nuclear ribonucleoprotein E-like
[Solanum tuberosum]
Length = 88
Score = 165 bits (417), Expect = 1e-38
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = -2
Query: 553 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 374
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDQRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 373 HMKKKTRKQLGRILLKGDNITLMMNTGK 290
++KK +RKQLGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKNSRKQLGRILLKGDNITLMMNTGK 88