BLASTX nr result

ID: Catharanthus23_contig00012660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00012660
         (1399 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661...    48   6e-10
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    63   3e-07
ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624...    45   1e-06

>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
          Length = 516

 Score = 47.8 bits (112), Expect(3) = 6e-10
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 39/158 (24%)
 Frame = +2

Query: 491 LDNRK*KRDFVNIYYSHLKKLWDELDNCIQLPPTT----PAEILTHYIRK**EKVL*-FL 655
           L N K   D +  Y+  LKKLWDEL++  Q+P  T       I     +K  E+ L  FL
Sbjct: 145 LANCKQNGDSIVTYFGRLKKLWDELNDFDQIPMCTCNGCKCGISAALNKKREEEKLHQFL 204

Query: 656 MGFNDRIYGTL*SNIIQQEPVPKV----KIVLAQIR-------KKEQHRSLACS------ 784
           MG +D  + T+ SN++  +P+P +    ++V+ + R       K+E+   +A +      
Sbjct: 205 MGLDDTQFRTVRSNVLSLDPLPNLNRAYQMVVQEERVGVMTRGKEERGDPIAFAVKSGRT 264

Query: 785 SMAEERSNTGXXXXX-----------------GYPDWW 847
           S  E++ NTG                      GYPDWW
Sbjct: 265 SSWEKKPNTGSEKPCSHCKRDGHDIDSCFQLVGYPDWW 302



 Score = 36.6 bits (83), Expect(3) = 6e-10
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 384 LRSFVNYSKRTNELWSNLKKKFLVENGSRKNELK 485
           LRS + Y +   ELW ++K++F + NG R  +LK
Sbjct: 109 LRSTITYRENAQELWDDIKQRFSISNGPRIQQLK 142



 Score = 26.9 bits (58), Expect(3) = 6e-10
 Identities = 14/41 (34%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 259 SKKK*RFLDELILVPEDDSGKAENDRRL-TLVHSWILNTIE 378
           +++K RF+D  I  P+D + + ++   + +++ SWI NTIE
Sbjct: 66  ARRKFRFVDGSIKKPDDAAPEIDDWWTVNSMIVSWIFNTIE 106


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
 Frame = +2

Query: 521 VNIYYSHLKKLWDELDNCIQLPPTTPAEILTHYIRK**EKVL*FLMGFNDRIYGTL*SNI 700
           V  YY+ +K +WDEL+  I++P  T          +  EK   FLMG +D  +GT+ S+I
Sbjct: 34  VAAYYAKIKGMWDELNQYIEIPECTCGAAQAIVKSREDEKAHQFLMGLDDTTFGTVRSSI 93

Query: 701 IQQEPVPKVKIVLAQIRKKEQHRSLA-----------------------CSSMAEERSNT 811
           +  +P+P +  + A + ++E+HRS+A                        S        T
Sbjct: 94  LALDPLPTLGKIYAMVTQEERHRSMARGADRAEITVFAAXTEKPGGQTNKSGSCTHCGKT 153

Query: 812 G-----XXXXXGYPDWWPKXXXXXXXXXXXXPGRGGAQSG*GTNSGHSRG 946
           G          GYPDWWP              GRG  + G G NS   RG
Sbjct: 154 GHDVADCFQLKGYPDWWPTRQM----------GRGRGR-GRGRNSYAGRG 192


>ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624694 isoform X1 [Citrus
            sinensis] gi|568852764|ref|XP_006480041.1| PREDICTED:
            uncharacterized protein LOC102624694 isoform X2 [Citrus
            sinensis] gi|568852766|ref|XP_006480042.1| PREDICTED:
            uncharacterized protein LOC102624694 isoform X3 [Citrus
            sinensis]
          Length = 320

 Score = 45.1 bits (105), Expect(3) = 1e-06
 Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 40/203 (19%)
 Frame = +2

Query: 530  YYSHLKKLWDELDNCIQLPPTT----PAEILTHYIRK**EKVL*-FLMGFNDRIYGTL*S 694
            YY  LK +W+EL N  Q P  +      E+     +K  E+ L  FLMG +D IYG++ S
Sbjct: 81   YYGKLKLIWEELANYEQYPICSCGGCTCELEAKLNKKCEEERLHQFLMGLDDTIYGSVRS 140

Query: 695  NIIQQEPVPKVKIVLAQIRKKEQHRSLA---------------------------CSSMA 793
            NI+  +P+P +    + + ++E+ +++                             S + 
Sbjct: 141  NILSTDPLPPLNRAYSLVVQEERVQTITRGKEGRGEPVAFAVQGGVKGQIEIREKSSVIC 200

Query: 794  EERSNTG-----XXXXXGYPDWWPKXXXXXXXXXXXXPGRGGAQSG*GTNSGHSR-GRGQ 955
            +    TG          GYP+WW               GRG  +   G   G ++ G+G+
Sbjct: 201  KHCRKTGHDADSCFQLIGYPEWW--------GDRSRTGGRGAGRGQGGQRQGIAQGGKGR 252

Query: 956  SPGLRGN-QHGNSK-MVVVGHIL 1018
               ++ N  H  S+   + GH+L
Sbjct: 253  GSQIKANAAHVTSEGSGIQGHVL 275



 Score = 32.3 bits (72), Expect(3) = 1e-06
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 384 LRSFVNYSKRTNELWSNLKKKFLVENGSRKNELK 485
           LRS + + +   +LW ++K++F V NG R ++LK
Sbjct: 32  LRSTITHMEVAKKLWDDIKERFSVGNGPRVHQLK 65



 Score = 22.3 bits (46), Expect(3) = 1e-06
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 343 TLVHSWILNTIE 378
           +++ SWILNTIE
Sbjct: 18  SMIVSWILNTIE 29


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