BLASTX nr result

ID: Catharanthus23_contig00012605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00012605
         (367 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT00666.1| hypothetical protein F775_01933 [Aegilops tauschii]     64   3e-08
ref|XP_002442909.1| hypothetical protein SORBIDRAFT_08g004750 [S...    62   8e-08
gb|AFK45663.1| unknown [Lotus japonicus]                               58   1e-06
ref|XP_004955067.1| PREDICTED: F-box protein At3g57580-like [Set...    56   4e-06
ref|XP_003623993.1| F-box protein [Medicago truncatula] gi|35549...    56   4e-06
ref|XP_003619747.1| F-box/kelch-repeat protein [Medicago truncat...    56   4e-06
ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus ...    56   6e-06
ref|XP_002449922.1| hypothetical protein SORBIDRAFT_05g025750 [S...    55   7e-06
gb|ESW15910.1| hypothetical protein PHAVU_007G113100g [Phaseolus...    55   1e-05
gb|EMT30192.1| hypothetical protein F775_42363 [Aegilops tauschii]     55   1e-05
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    55   1e-05
emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]    55   1e-05

>gb|EMT00666.1| hypothetical protein F775_01933 [Aegilops tauschii]
          Length = 429

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/50 (56%), Positives = 39/50 (78%)
 Frame = +2

Query: 44  KKQVDSASVTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKA 193
           ++Q   +   L DE++WE++IRLP ESL+R K+VSKAWR+II DP FV+A
Sbjct: 20  RRQTKFSCEDLLDEIVWEILIRLPVESLVRFKSVSKAWRTIISDPVFVRA 69


>ref|XP_002442909.1| hypothetical protein SORBIDRAFT_08g004750 [Sorghum bicolor]
           gi|241943602|gb|EES16747.1| hypothetical protein
           SORBIDRAFT_08g004750 [Sorghum bicolor]
          Length = 311

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 35/72 (48%), Positives = 43/72 (59%)
 Frame = +2

Query: 29  MENSPKKQVDSASVTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRDRF 208
           ME    +   +A+  LPDELI E++ RLP +SL R K VS+AWRS+I DP    A R RF
Sbjct: 1   MEEGSCRAAAAAAAVLPDELIVEILARLPAKSLCRFKCVSRAWRSLISDP----ANRRRF 56

Query: 209 RLLLSPLQIPVP 244
              LS L  P P
Sbjct: 57  AHTLSGLFFPRP 68


>gb|AFK45663.1| unknown [Lotus japonicus]
          Length = 160

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 5/59 (8%)
 Frame = +2

Query: 62  ASVTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRD-----RFRLLLS 223
           +SV LPDELI  +++RLP  SL+R K+V K+W S+I DP F K++ D       RLLLS
Sbjct: 20  SSVLLPDELIEAILVRLPVSSLLRFKSVCKSWLSVISDPQFAKSQFDLAASPTHRLLLS 78


>ref|XP_004955067.1| PREDICTED: F-box protein At3g57580-like [Setaria italica]
          Length = 453

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/50 (46%), Positives = 37/50 (74%)
 Frame = +2

Query: 56  DSASVTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRDR 205
           D  SV+LP+++I++V+ RLP ++L R + VSK WR++I DP F  A++ R
Sbjct: 42  DGVSVSLPEDIIFDVLARLPVKALCRFRCVSKGWRALISDPAFAAAQQSR 91


>ref|XP_003623993.1| F-box protein [Medicago truncatula] gi|355499008|gb|AES80211.1|
           F-box protein [Medicago truncatula]
          Length = 445

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +2

Query: 68  VTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRDR 205
           V LPD+LI E++  LP +SL+RLK VSK+W+S+I DP+FVK   +R
Sbjct: 7   VVLPDDLIAELLSFLPVKSLVRLKCVSKSWKSLISDPSFVKLHLNR 52


>ref|XP_003619747.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355494762|gb|AES75965.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 332

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/53 (56%), Positives = 36/53 (67%)
 Frame = +2

Query: 50  QVDSASVTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRDRF 208
           Q  S  V LPDELI EV+  LP +SL+RLK VSK+W ++I DP FVK    RF
Sbjct: 15  QAMSRRVYLPDELIAEVLSFLPVKSLLRLKLVSKSWINLISDPIFVKLHLHRF 67


>ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542641|gb|EEF44178.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 406

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/58 (43%), Positives = 40/58 (68%)
 Frame = +2

Query: 32  ENSPKKQVDSASVTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRDR 205
           ++S + + D++  TLP++LI E++ R+P + L+R K VSK+W SII DP F K +  R
Sbjct: 39  KSSAQAEPDTSISTLPEDLIVEILSRVPVKPLLRFKCVSKSWNSIISDPRFAKLQLKR 96


>ref|XP_002449922.1| hypothetical protein SORBIDRAFT_05g025750 [Sorghum bicolor]
           gi|241935765|gb|EES08910.1| hypothetical protein
           SORBIDRAFT_05g025750 [Sorghum bicolor]
          Length = 368

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/61 (44%), Positives = 41/61 (67%)
 Frame = +2

Query: 71  TLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRDRFRLLLSPLQIPVPRC 250
           +LP+++I EV++RLP ++L R + VSK+WR++I DP F  A+R R      PL + V R 
Sbjct: 23  SLPEDIILEVLVRLPVKALCRFRCVSKSWRALISDPAFAAAQRSR----TGPLVVGVFRS 78

Query: 251 R 253
           R
Sbjct: 79  R 79


>gb|ESW15910.1| hypothetical protein PHAVU_007G113100g [Phaseolus vulgaris]
          Length = 400

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/49 (48%), Positives = 34/49 (69%)
 Frame = +2

Query: 59  SASVTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRDR 205
           SAS T+PD+L+ E++ R+P ++LMR + VSK W S + DPN VK    R
Sbjct: 25  SASPTMPDDLMMEILSRIPVKALMRFRCVSKYWNSFVFDPNLVKLHLQR 73


>gb|EMT30192.1| hypothetical protein F775_42363 [Aegilops tauschii]
          Length = 303

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 21/47 (44%), Positives = 35/47 (74%)
 Frame = +2

Query: 65  SVTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRDR 205
           SV +P +++WEV++R+P  +L R +AV ++WRS++ DP F+KA   R
Sbjct: 15  SVEMPPDVVWEVLLRVPARALCRGRAVCRSWRSLLSDPGFIKAYASR 61


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = +2

Query: 65  SVTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRDR 205
           S TLPDE++ E++ RLP  SLM++K V K+W +II DP F+K   +R
Sbjct: 91  SETLPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNR 137


>emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]
          Length = 862

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 21/46 (45%), Positives = 36/46 (78%)
 Frame = +2

Query: 68  VTLPDELIWEVVIRLPTESLMRLKAVSKAWRSIIEDPNFVKARRDR 205
           V++PDEL++E++  +P +SL++ + V K WRS+I DP+F++A R R
Sbjct: 479 VSIPDELVFEILTYIPVKSLLQCRGVCKRWRSMISDPSFIEAHRSR 524


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