BLASTX nr result
ID: Catharanthus23_contig00012509
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00012509
(1079 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004298112.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 92 4e-16
ref|XP_006489137.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 89 2e-15
gb|EOY06439.1| RING/U-box superfamily protein, putative isoform ... 88 5e-15
gb|EOY06438.1| RING/U-box superfamily protein, putative isoform ... 88 5e-15
ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|5... 87 9e-15
ref|XP_006419647.1| hypothetical protein CICLE_v10005542mg [Citr... 87 1e-14
ref|XP_004241072.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 86 3e-14
ref|XP_006356698.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 84 1e-13
ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 75 3e-11
ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 75 3e-11
emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera] 74 1e-10
emb|CBI26097.3| unnamed protein product [Vitis vinifera] 71 7e-10
ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 71 7e-10
ref|XP_006295472.1| hypothetical protein CARUB_v10024575mg [Caps... 68 7e-09
ref|NP_850310.1| C3HC4 type zinc finger domain protein [Arabidop... 67 1e-08
ref|XP_006411134.1| hypothetical protein EUTSA_v10017000mg [Eutr... 66 2e-08
ref|XP_002879783.1| zinc finger family protein [Arabidopsis lyra... 66 3e-08
gb|EOY06440.1| RING/U-box superfamily protein, putative isoform ... 64 1e-07
gb|ABR17356.1| unknown [Picea sitchensis] 62 3e-07
gb|EMJ28142.1| hypothetical protein PRUPE_ppa014684mg [Prunus pe... 62 5e-07
>ref|XP_004298112.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Fragaria vesca
subsp. vesca]
Length = 282
Score = 92.0 bits (227), Expect = 4e-16
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
PSV+VHV TSL+ + ++K Q DV FL PL PFL ERT+MFWHELRCFAE +
Sbjct: 208 PSVVVHVVTSLYTASLDKKDSVSSGQHDVLDNFLEPLRPFLLERTDMFWHELRCFAESPF 267
Query: 897 SMETYDGLVEYARL 856
+M+TYD +VEY RL
Sbjct: 268 NMQTYDAVVEYRRL 281
>ref|XP_006489137.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Citrus sinensis]
Length = 294
Score = 89.4 bits (220), Expect = 2e-15
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
PS+IVHVA++LFI+ E K P Q V FL+PL PFL +T+MFWHELRCFAE S
Sbjct: 220 PSIIVHVASTLFIASLEGKLNAAPRQPSVEDDFLAPLRPFLLNQTDMFWHELRCFAESSL 279
Query: 897 SMETYDGLVEYARL 856
+ ETYD +VEY +L
Sbjct: 280 TPETYDAVVEYRKL 293
>gb|EOY06439.1| RING/U-box superfamily protein, putative isoform 2 [Theobroma cacao]
Length = 289
Score = 88.2 bits (217), Expect = 5e-15
Identities = 42/74 (56%), Positives = 52/74 (70%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
PS+I+HV +SLF S HE K++ L V FL PL PFLH T MFWHEL CFAE S+
Sbjct: 215 PSIILHVVSSLFFSRHEGKYDGSSGLLLVEDDFLVPLKPFLHNWTNMFWHELSCFAESSF 274
Query: 897 SMETYDGLVEYARL 856
++ETYD +VEY +L
Sbjct: 275 TIETYDAVVEYRQL 288
>gb|EOY06438.1| RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao]
Length = 301
Score = 88.2 bits (217), Expect = 5e-15
Identities = 42/74 (56%), Positives = 52/74 (70%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
PS+I+HV +SLF S HE K++ L V FL PL PFLH T MFWHEL CFAE S+
Sbjct: 227 PSIILHVVSSLFFSRHEGKYDGSSGLLLVEDDFLVPLKPFLHNWTNMFWHELSCFAESSF 286
Query: 897 SMETYDGLVEYARL 856
++ETYD +VEY +L
Sbjct: 287 TIETYDAVVEYRQL 300
>ref|XP_002330333.1| predicted protein [Populus trichocarpa]
gi|566185432|ref|XP_006380195.1| zinc finger family
protein [Populus trichocarpa] gi|550333716|gb|ERP57992.1|
zinc finger family protein [Populus trichocarpa]
Length = 289
Score = 87.4 bits (215), Expect = 9e-15
Identities = 44/73 (60%), Positives = 52/73 (71%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
PSVIVH+A+SLFI+ ER+ + +QL V FL PL FLH T FWHELRCFAE S
Sbjct: 215 PSVIVHLASSLFIASLERRSDVQSDQLGVEDHFLEPLRRFLHGWTNTFWHELRCFAESSL 274
Query: 897 SMETYDGLVEYAR 859
+METYD +VEY R
Sbjct: 275 TMETYDMVVEYKR 287
>ref|XP_006419647.1| hypothetical protein CICLE_v10005542mg [Citrus clementina]
gi|557521520|gb|ESR32887.1| hypothetical protein
CICLE_v10005542mg [Citrus clementina]
Length = 294
Score = 87.0 bits (214), Expect = 1e-14
Identities = 42/74 (56%), Positives = 52/74 (70%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
PS+IVHVA++LFI+ E K P Q V F +PL PFL +T+MFWHELRCFAE S
Sbjct: 220 PSIIVHVASTLFIASLEGKLNAAPRQPSVEDDFWAPLRPFLLNQTDMFWHELRCFAESSL 279
Query: 897 SMETYDGLVEYARL 856
+ ETYD +VEY +L
Sbjct: 280 TPETYDAVVEYRKL 293
>ref|XP_004241072.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Solanum
lycopersicum]
Length = 272
Score = 85.5 bits (210), Expect = 3e-14
Identities = 45/74 (60%), Positives = 53/74 (71%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
PS+IVHVATSLFI+ E H Q + FL+PL PFLHER E+FWHELRCFAE +
Sbjct: 203 PSIIVHVATSLFIT--ENTHST---QWCDRNEFLAPLRPFLHERAEVFWHELRCFAESPF 257
Query: 897 SMETYDGLVEYARL 856
SM+TYD +VEY L
Sbjct: 258 SMQTYDTVVEYYSL 271
>ref|XP_006356698.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Solanum
tuberosum]
Length = 272
Score = 83.6 bits (205), Expect = 1e-13
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
PS+IVHVATSLFI+ E H Q + FL+PL PFLHE E+FWHELRCFAE
Sbjct: 203 PSIIVHVATSLFIT--ENTHSI---QRCARNDFLAPLRPFLHEHAEIFWHELRCFAESPL 257
Query: 897 SMETYDGLVEYARL 856
SM+TYD +VEY L
Sbjct: 258 SMQTYDTVVEYYSL 271
>ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis sativus]
Length = 288
Score = 75.5 bits (184), Expect = 3e-11
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
P++IVH+ SLF++ + E QL+ FLSPL PFL E+T++FWHELRCFA
Sbjct: 218 PTIIVHLVISLFVA----RIEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPL 273
Query: 897 SMETYDGLVEY 865
ME YD +VEY
Sbjct: 274 RMEEYDSVVEY 284
>ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis sativus]
Length = 288
Score = 75.5 bits (184), Expect = 3e-11
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
P++IVH+ SLF++ + E QL+ FLSPL PFL E+T++FWHELRCFA
Sbjct: 218 PTIIVHLVISLFVA----RIEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPL 273
Query: 897 SMETYDGLVEY 865
ME YD +VEY
Sbjct: 274 RMEEYDSVVEY 284
>emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]
Length = 321
Score = 73.9 bits (180), Expect = 1e-10
Identities = 37/71 (52%), Positives = 47/71 (66%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSY 898
P+VIVHVATSLF+S E L FL+PL FLH +T FWHEL CFA+ ++
Sbjct: 220 PAVIVHVATSLFVSSLEENTPL--GYLGGEDDFLAPLRSFLHNQTNTFWHELSCFADSTF 277
Query: 897 SMETYDGLVEY 865
+METYD +V+Y
Sbjct: 278 NMETYDAVVKY 288
>emb|CBI26097.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 71.2 bits (173), Expect = 7e-10
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = -3
Query: 1074 SVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSYS 895
+VIVHVATSLF+S E L FL+PL FLH +T FWHEL CFA+ +++
Sbjct: 191 AVIVHVATSLFVSSLEENTPL--GYLGGEDDFLAPLRSFLHNQTNTFWHELSCFADSTFN 248
Query: 894 METYDGLVEY 865
METYD +V+Y
Sbjct: 249 METYDAVVKY 258
>ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Vitis vinifera]
Length = 294
Score = 71.2 bits (173), Expect = 7e-10
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = -3
Query: 1074 SVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAECSYS 895
+VIVHVATSLF+S E L FL+PL FLH +T FWHEL CFA+ +++
Sbjct: 223 AVIVHVATSLFVSSLEENTPL--GYLGGEDDFLAPLRSFLHNQTNTFWHELSCFADSTFN 280
Query: 894 METYDGLVEY 865
METYD +V+Y
Sbjct: 281 METYDAVVKY 290
>ref|XP_006295472.1| hypothetical protein CARUB_v10024575mg [Capsella rubella]
gi|482564180|gb|EOA28370.1| hypothetical protein
CARUB_v10024575mg [Capsella rubella]
Length = 276
Score = 67.8 bits (164), Expect = 7e-09
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDV-AHGFLSPLWPFLHERTEMFWHELRCFAECS 901
P +IVH A++LFI ER+ P Q ++ +S L FL ++ ++FWHELRCFAE S
Sbjct: 201 PLIIVHFASTLFIKRLEREDNRQPRQTEMLVEDEVSLLQKFLLDKADIFWHELRCFAESS 260
Query: 900 YSMETYDGLVEY 865
+ME YD +VEY
Sbjct: 261 LTMEAYDAVVEY 272
>ref|NP_850310.1| C3HC4 type zinc finger domain protein [Arabidopsis thaliana]
gi|17473924|gb|AAL38373.1| putative RING zinc finger
protein [Arabidopsis thaliana] gi|20148385|gb|AAM10083.1|
putative RING zinc finger protein [Arabidopsis thaliana]
gi|330254541|gb|AEC09635.1| C3HC4 type zinc finger domain
protein [Arabidopsis thaliana]
Length = 296
Score = 67.0 bits (162), Expect = 1e-08
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDV-AHGFLSPLWPFLHERTEMFWHELRCFAECS 901
PSVIVH A++LFI ER++ Q + +S L FL ++ ++FWHELRCFAE
Sbjct: 221 PSVIVHFASALFIKRLERENNRQTGQTGMLVEDEVSSLRKFLSDKVDIFWHELRCFAESI 280
Query: 900 YSMETYDGLVEY 865
+METYD +VEY
Sbjct: 281 LTMETYDAVVEY 292
>ref|XP_006411134.1| hypothetical protein EUTSA_v10017000mg [Eutrema salsugineum]
gi|557112303|gb|ESQ52587.1| hypothetical protein
EUTSA_v10017000mg [Eutrema salsugineum]
Length = 300
Score = 66.2 bits (160), Expect = 2e-08
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDV-AHGFLSPLWPFLHERTEMFWHELRCFAECS 901
PS+IVH A++LFI ER++ Q + S L FL ++ ++FWHELRCFAE S
Sbjct: 225 PSIIVHFASALFIKRLERENSRQSGQTGMLVEDEDSSLRRFLFDKEDIFWHELRCFAESS 284
Query: 900 YSMETYDGLVEY 865
+METYD +VEY
Sbjct: 285 LTMETYDAVVEY 296
>ref|XP_002879783.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297325622|gb|EFH56042.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 65.9 bits (159), Expect = 3e-08
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDV-AHGFLSPLWPFLHERTEMFWHELRCFAECS 901
PS+IVH A++LFI ER++ Q + +S L FL ++ ++FWHELRCFAE
Sbjct: 189 PSIIVHFASALFIKRLERENNRHSGQTGMLVEDEVSSLRIFLSDKVDIFWHELRCFAESI 248
Query: 900 YSMETYDGLVEY 865
+METYD +VEY
Sbjct: 249 LTMETYDAVVEY 260
>gb|EOY06440.1| RING/U-box superfamily protein, putative isoform 3, partial
[Theobroma cacao]
Length = 215
Score = 63.5 bits (153), Expect = 1e-07
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAEC 904
PS+I+HV +SLF S HE K++ L V FL PL PFLH T MFWHEL F C
Sbjct: 158 PSIILHVVSSLFFSRHEGKYDGSSGLLLVEDDFLVPLKPFLHNWTNMFWHELSSFRAC 215
>gb|ABR17356.1| unknown [Picea sitchensis]
Length = 346
Score = 62.4 bits (150), Expect = 3e-07
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Frame = -3
Query: 1077 PSVIVHVATSLFISM---HERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELRCFAE 907
P+V+VH+ SL++S E K +P + F+ L PF+ ++ FWHELRCFAE
Sbjct: 264 PTVLVHLVFSLWLSRLRKQEGKQNLVPSSNE--DEFMQQLEPFIGDKANAFWHELRCFAE 321
Query: 906 CSYSMETYDGLVEYAR 859
++M YD + EY R
Sbjct: 322 SPFTMSAYDSIAEYQR 337
>gb|EMJ28142.1| hypothetical protein PRUPE_ppa014684mg [Prunus persica]
Length = 261
Score = 61.6 bits (148), Expect = 5e-07
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = -3
Query: 1077 PSVIVHVATSLFISMHERKHECIPEQLDVAHGFLSPLWPFLHERTEMFWHELR 919
PS+IVHVATSLFI+ E + Q DV FL+ L PFL +RT+MFWHELR
Sbjct: 209 PSIIVHVATSLFIASLENEGHVPSGQCDVRDDFLARLRPFLLDRTDMFWHELR 261